# newdoc id = /home/UiO/epe/2018/trial/events.txt # newpar # sent_id = 1 # text = Decreased IL-12 production and Th1 cell development by acetyl salicylic acid-mediated inhibition of NF-kappaB. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 12 12 NUM CD NumType=Card _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Th1 th1 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 acetyl acetyl ADJ JJ Degree=Pos _ _ _ _ 12 salicylic salicylic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2 # text = IL-12 is a 75-kDa heterodimeric cytokine composed of two covalently linked p35 and p40 chains. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 covalently covalently ADV RB _ _ _ _ _ 15 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 p35 p35 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p40 p40 NUM CD NumType=Card _ _ _ _ 19 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3 # text = This pro-inflammatory cytokine plays a prominent role in the development of Th1 cell-mediated immune responses. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Th1 Th1 NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4 # text = Th1 cell-mediated immune responses have been implicated in the pathogenesis of chronic inflammatory autoimmune diseases. 1 Th1 Th1 NUM CD NumType=Card _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 immune immune ADJ JJ Degree=Pos _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 autoimmune autoimmune NOUN NN Number=Sing _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5 # text = Thus, IL-12 appears to be a critical factor in the generation and maintenance of chronic inflammatory conditions. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 12 12 NUM CD NumType=Card _ _ _ _ 6 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 critical critical ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 generation generation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 19 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 20 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6 # text = In this study, we investigated the effects of a commonly prescribed anti-inflammatory drug, acetyl salicylic acid (ASA), on IL-12 production and Th1 cell development. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 commonly commonly ADV RB _ _ _ _ _ 12 prescribed prescri VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acetyl acetyl ADJ JJ Degree=Pos _ _ _ _ 17 salicylic salicylic ADJ JJ Degree=Pos _ _ _ _ 18 acid acid NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ASA ASA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 12 12 NUM CD NumType=Card _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Th1 th1 NUM CD NumType=Card _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7 # text = ASA was found to inhibit secretion of the IL-12 heterodimer as well as p40 monomer by human monocytic cells. 1 ASA ASa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 p40 p40 NUM CD NumType=Card _ _ _ _ 17 monomer monomer NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8 # text = This was associated with the down-regulation of IL-12p40 mRNA expression. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 12p40 12p40 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9 # text = Analysis of the regulation of the p40 gene promoter revealed that ASA inhibited NF-kappaB activation and binding to the p40-kappaB site in the p40 promoter, leading to transcriptional repression of the p40 gene. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 p40 p40 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 ASA ASA PROPN NNP Number=Sing _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p40 p40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 p40 p40 NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repression repression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 p40 p40 NOUN NN Number=Sing _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10 # text = Addition of ASA to an in vitro T helper cell differentiation system, at concentrations compatible with plasma levels reached during anti-inflammatory therapy, resulted in reduced development of Th1 cells. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ASA ASA PROPN NNP Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 16 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 plasma plasma NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 development development NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 Th1 Th1 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11 # text = These results suggest that the inhibition of NF-kappaB activation by ASA leads to down-regulation of IL-12 production and inhibition of Th1 cell development. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ASA ASa PROPN NNP Number=Sing _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 12 12 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Th1 Th1 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12 # text = Document 0030020 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030020 0030020 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 13 # text = NF-kappa B controls expression of inhibitor 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 controls controls NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 14 # text = I kappa 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 15 # text = B alpha: 1 B b NOUN NN Number=Sing _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ # sent_id = 16 # text = evidence for an inducible autoregulatory pathway. 1 evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 17 # text = The eukaryotic transcription factor nuclear factor-kappa B (NF-kappa B) participates in many parts of the genetic program mediating T lymphocyte activation and growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 participates participate NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 many many ADJ JJ Degree=Pos _ _ _ _ 19 parts part NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 23 program program NOUN NN Number=Sing _ _ _ _ 24 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 18 # text = Nuclear expression of NF-kappa B occurs after its induced dissociation from its cytoplasmic inhibitor 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 19 # text = I kappa B alpha. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 20 # text = Phorbol ester and tumor necrosis factor-alpha induction of nuclear NF-kappa B is associated with both the degradation of performed I kappa B alpha and the activation of I kappa B alpha gene expression. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 ester ester NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 degradation degradation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha ADV RB _ _ _ _ _ 35 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 21 # text = Transfection studies indicate that the I kappa B alpha gene is specifically induced by the 65-kilodalton transactivating subunit of NF-kappa B. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X GW _ _ _ _ _ 8 B b X GW _ _ _ _ _ 9 alpha alpha X GW _ _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kilodalton kilodalton NOUN NN Number=Sing _ _ _ _ 19 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 20 subunit subunit NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ _ # sent_id = 22 # text = Association of the newly synthesized I kappa B alpha with p65 restores intracellular inhibition of NF-kappa B DNA binding activity and prolongs the survival of this labile inhibitor. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 newly newly ADV RB _ _ _ _ _ 5 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 p65 p65 NUM CD NumType=Card _ _ _ _ 12 restores restore NOUN NNS Number=Plur _ _ _ _ 13 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 prolongs prolong VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 survival survival NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 labile labile NOUN NN Number=Sing _ _ _ _ 30 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 23 # text = Together, these results show that NF-kappa B controls the expression of I kappa B alpha by means of an inducible autoregulatory pathway. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 means means NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 24 # text = Document 0030021 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030021 0030021 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 25 # text = Activation of the NF-kappaB transcription factor in a T-lymphocytic cell line by hypochlorous acid. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 hypochlorous hypochlorous ADJ JJ Degree=Pos _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 26 # text = Reactive oxygen species (ROS) such as hydrogen peroxide serve as second messengers in the induction of the transcription factor NF-kappaB, and hence in the activation and replication of human immunodeficiency virus type 1 (HIV-1) in human cells. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 3 species species NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 10 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 11 serve serve VERB VB VerbForm=Inf _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 messengers messenger NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 hence hence ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 replication replication NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 type type NOUN NN Number=Sing _ _ _ _ 38 1 1 NUM CD NumType=Card _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 27 # text = During inflammatory reactions, many oxidative species are produced, one of which is hypochlorous acid (HOCl), which is responsible for the microbicidal effects of activated human polymorphonuclear leukocytes. 1 During during ADP IN _ _ _ _ _ 2 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 many many ADJ JJ Degree=Pos _ _ _ _ 6 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 7 species species NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Int _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 hypochlorous hypochlorous ADV RB _ _ _ _ _ 16 acid acid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HOCl HOCl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 polymorphonuclear polymorphonuclear NOUN NN Number=Sing _ _ _ _ 32 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 28 # text = Treatment of a T-lymphocytic cell line with micromolar concentrations of 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 10 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ # sent_id = 29 # text = HOCl promoted the appearance of transcription factor NF-kappaB (the heterodimer p50/p65) in the nucleus of the cells, even in the absence of de novo protein synthesis. 1 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 2 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 appearance appearance NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 de de NOUN NN Number=Sing _ _ _ _ 31 novo novo NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 30 # text = Western blot analysis of the NF-kappaB inhibitory subunits (IkappaB) demonstrated that both IkappaB-alpha proteolysis and p105 processing were induced by the treatment. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p105 p105 NUM CD NumType=Card _ _ _ _ 23 processing processing NOUN NN Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 31 # text = NF-kappaB activation was very effective when cells were subjected to hyperthermia before being treated with HOCl. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 very very ADV RB _ _ _ _ _ 7 effective effective ADJ JJ Degree=Pos _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 subjected subject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 hyperthermia hyperthermia NOUN NN Number=Sing _ _ _ _ 14 before before SCONJ IN _ _ _ _ _ 15 being be AUX VBG VerbForm=Ger _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 HOCl HOCl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 32 # text = Various antioxidants, such as pyrrolidine dithiocarbamate, p-bromophenacyl-bromide and nordihydroguaiaretic acid could strongly reduce NF-kappaB translocation, demonstrating the importance of oxidative species in the transduction mechanism. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 pyrrolidine pyrrolidine ADJ JJ Degree=Pos _ _ _ _ 7 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p-bromophenacyl-bromide p-bromophenacyl-bromide ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nordihydroguaiaretic nordihydroguaiaretic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 strongly strongly ADV RB _ _ _ _ _ 15 reduce reduce VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 importance importance NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 26 species species NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 33 # text = Moreover, ACH-2 cells treated with HOCl or H2O2 released tumour necrosis factor-alpha (TNF-alpha) in the supernatants. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ACH ACH DET DT _ _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 12 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tumour tumour NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 supernatants supernatant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 34 # text = The importance of TNF-alpha release in NF-kappaB induction by HOCl or H2O2 was demonstrated by the fact that: (1) the nuclear appearance of NF-kappaB was promoted in untreated cells; and (2) synergism between TNF-alpha and HOCl was detected. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 release release NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 H2O2 H2O2 NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 fact fact NOUN NN Number=Sing _ _ _ _ 22 that that SCONJ IN _ _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 1 1 X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 appearance appearance NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ; ; PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 2 2 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 synergism synergism NOUN NN Number=Sing _ _ _ _ 45 between between ADP IN _ _ _ _ _ 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 alpha alpha PROPN NNP Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 51 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 52 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 35 # text = Collectively, these results suggest that HOCl should be considered as an oxidative species capable of inducing NF-kappaB in a T-lymphocytic cell line through a transduction mechanism involving ROS, and having a long-distance effect through subsequent TNF-alpha release. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 8 should should AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 14 species species NOUN NNS Number=Plur _ _ _ _ 15 capable capable ADJ JJ Degree=Pos _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 31 involving involve VERB VBG VerbForm=Ger _ _ _ _ 32 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 having have VERB VBG VerbForm=Ger _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 distance distance NOUN NN Number=Sing _ _ _ _ 40 effect effect NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 43 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 alpha alpha NOUN NN Number=Sing _ _ _ _ 46 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 36 # text = Document 0030022 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030022 0030022 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 37 # text = Human interferon regulatory factor 2 gene. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 interferon interferon ADP IN _ _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 38 # text = Intron-exon organization and functional analysis of 5'-flanking region. 1 Intron-exon Intron-exon ADP IN _ _ _ _ _ 2 organization organization NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 39 # text = Interferon regulatory factor 2 (IRF-2) is a transcriptional regulatory protein that terminates interferon beta expression initiated by interferon regulatory factor 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 2 2 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 terminates terminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 interferon interferon ADP IN _ _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 40 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 41 # text = In this study, we isolated the genomic DNA for human IRF-2 gene, determined the intron-exon structure of the human IRF-2 gene, mapped the major transcription initiation site, identified a number of potential regulatory elements in the 5'-flanking region, and localized the IRF-2 gene on human chromosome 4. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 exon exon NOUN NN Number=Sing _ _ _ _ 22 structure structure NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 major major ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 initiation initiation NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 number number NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 potential potential ADJ JJ Degree=Pos _ _ _ _ 43 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 44 elements element NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 51 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 2 2 NUM CD NumType=Card _ _ _ _ 59 gene gene NOUN NN Number=Sing _ _ _ _ 60 on on ADP IN _ _ _ _ _ 61 human human ADJ JJ Degree=Pos _ _ _ _ 62 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 63 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 42 # text = The IRF-2 promoter region contains a CpG island, with several GC boxes, a putative NF-kappa B-binding site, and a CAAT box, but no TATA box. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 CpG CpG PROPN NNP Number=Sing _ _ _ _ 10 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 GC Gc NOUN NN Number=Sing _ _ _ _ 15 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 putative putative ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 CAAT Caat NOUN NN Number=Sing _ _ _ _ 30 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 TATA TATa NOUN NN Number=Sing _ _ _ _ 35 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 43 # text = When the promoter region was linked with a heterologous reporter gene, we found that the promoter region is inducible by both interferons (interferon-alpha and -gamma) and interferon regulatory factor 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 10 reporter reporter NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 interferons interferon NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 interferon interferon ADP IN _ _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 44 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 45 # text = The region which induced these inductions was identified as being confined to 40 nucleotides 5' to the major transcriptional initiation site by testing a series of clones with truncated promoter of IRF-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 inductions induction NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 being be AUX VBG VerbForm=Ger _ _ _ _ 11 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 40 40 NUM CD NumType=Card _ _ _ _ 14 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 initiation initiation NOUN NN Number=Sing _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 testing teste VERB VBG VerbForm=Ger _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 series series NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 clones clone NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 46 # text = This region contains elements which are shared with the transcriptional enhancers of other genes including interferon regulatory factor 1, interferon beta, and interferon-inducible genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shared share VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 interferon interferon ADP IN _ _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 interferon interferon ADP IN _ _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 47 # text = These data suggest that interferon regulatory factor 1 not only triggers the activation of the interferon signal transduction pathway, but also may play a role in limiting the duration of this response by activating the transcription of IRF-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 interferon interferon ADP IN _ _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 play play VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in SCONJ IN _ _ _ _ _ 28 limiting limite VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 duration duration NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 by by SCONJ IN _ _ _ _ _ 35 activating activate VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 48 # text = Document 0030023 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030023 0030023 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 49 # text = IL-10 inhibits nuclear factor-kappa B/Rel nuclear activity in CD3-stimulated human peripheral T lymphocytes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 50 # text = IL-10 markedly reduces nuclear factor (NF)-kappa B/Rel nuclear activity induced in PBMC by stimulation with the anti-CD3 mAb OKT3. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 markedly markedly ADV RB _ _ _ _ _ 5 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Rel Rel PROPN NNP Number=Sing _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 26 mAb mAb NOUN NN Number=Sing _ _ _ _ 27 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 51 # text = The inhibition is exerted specifically on the NF-kappa B/Rel activation induced by mAb OKT3, and not that produced by PMA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 exerted exert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 mAb mAb PROPN NNP Number=Sing _ _ _ _ 18 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 52 # text = As judged by supershifting the DNA-protein complexes with Abs recognizing specific components of the NF-kappa B/Rel protein family, the p50/p65 (Rel A) heterodimeric form of NF-kappa B is primarily affected. 1 As as SCONJ IN _ _ _ _ _ 2 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 supershifting supershift VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Abs Abs PROPN NNPS Number=Plur _ _ _ _ 12 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 components component NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Rel Rel PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 p65 p65 NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Rel Rel NOUN NN Number=Sing _ _ _ _ 32 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 35 form form NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 primarily primarily ADV RB _ _ _ _ _ 43 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 53 # text = The maximal effect is observed at the IL-10 concentration of 20 U/ml. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 concentration concentration NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 20 20 NUM CD NumType=Card _ _ _ _ 14 U/ml u/ml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 54 # text = IL-10 inhibitory activity is exerted on T lymphocytes and is mediated by monocytes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 exerted exert VERB VBN Tense=Past|Typo=Yes|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 55 # text = Indeed, monocytes pretreated with IL-10 are able so inhibit NF-kappa B nuclear activity in purified T lymphocytes stimulated with OKT3. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 so so ADV RB _ _ _ _ _ 12 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 purified purified ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 56 # text = Soluble factors do not appear to be involved in the mechanism of inhibition. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 appear appear VERB VB VerbForm=Inf _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 57 # text = On the other hand, the up-regulation of CD80 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ # sent_id = 58 # text = Ag, found on monocytes obtained from PBMC incubated with OKT3, is not detected after addition of IL-10, and the anti-CD28 mAb CLB-CD28/1 restores the NF-kappa B/Rel nuclear activity in IL-10-inhibited lymphocytes. 1 Ag ag PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 9 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 anti-CD28 anti-CD28 PROPN NNP Number=Sing _ _ _ _ 26 mAb mAb PROPN NNP Number=Sing _ _ _ _ 27 CLB CLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 CD28/1 CD28/1 PROPN NNP Number=Sing _ _ _ _ 30 restores restore VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 Rel Rel PROPN NNP Number=Sing _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 59 # text = Therefore, the NF-kappa B/Rel inhibition might be ascribed to a lack of cooperation between accessory cells and T lymphocytes, resulting from down-regulation of a costimulatory molecule, such as CD80, produced by IL-10 on activated monocytes. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 ascribed ascribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 lack lack NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 resulting result VERB VBG VerbForm=Ger _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 down down ADV RB _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 such such ADJ JJ Degree=Pos _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 CD80 CD80 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 10 10 NUM CD NumType=Card _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 60 # text = Our results demonstrate that IL-10 can inhibit the induction of NF-kappa B/Rel nuclear activity in CD3-stimulated T lymphocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 Rel Rel PROPN NNP Number=Sing _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT : _ _ _ _ SpaceAfter=No 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 61 # text = Since inappropriate activation of kappa B-driven genes has a physiopathologic role in a number of diseases, such as HIV infection, our findings support the possibility of using this cytokine to suppress an undesirable activation of these transcription factors. 1 Since since ADP IN _ _ _ _ _ 2 inappropriate inappropriate ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 physiopathologic physiopathologic ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 number number NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 such such ADJ JJ Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 26 findings finding NOUN NNS Number=Plur _ _ _ _ 27 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 possibility possibility NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 using use VERB VBG VerbForm=Ger _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 undesirable undesirable ADJ JJ Degree=Pos _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 62 # text = Document 0030024 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030024 0030024 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 63 # text = TNFalpha cooperates with the protein kinase A pathway to synergistically increase HIV-1 LTR transcription via downstream TRE-like cAMP response elements. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 synergistically synergistically ADV RB _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 19 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 like like ADJ JJ Degree=Pos _ _ _ _ 22 cAMP camp NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 64 # text = Activating protein-1 (AP-1) binding TPA responsive elements (TRE) are located downstream of the transcription initiation site in the U5 region of the HIV-1 long terminal repeat (LTR). 1 Activating Activat VERB VBG VerbForm=Ger _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -1 -1 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 TPA Tpa DET DT Definite=Ind|PronType=Art _ _ _ _ 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TRE Tre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 downstream downstream NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 initiation initiation NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 U5 U5 PROPN NNP Number=Sing _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 long long ADJ JJ Degree=Pos _ _ _ _ 34 terminal terminal NOUN NN Number=Sing _ _ _ _ 35 repeat repeat NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 65 # text = These downstream sequence elements, termed DSE, can bind both AP-1 and CREB/ATF transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 DSE Dse NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 bind bind VERB VB VerbForm=Inf _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CREB Creb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 ATF Atf PROPN NNP Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 66 # text = Recently, we demonstrated that the DSE are also cAMP-responsive elements (CRE), since they mediated activation signals elicited by cholera toxin (Ctx), a potent activator of the cAMP-dependent protein kinase A (PKA) signal transduction pathway. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 DSE Dse NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 cAMP camp ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 since since SCONJ IN _ _ _ _ _ 19 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 20 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ _ 23 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 cholera cholera NOUN NN Number=Sing _ _ _ _ 26 toxin toxin NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Ctx Ctx PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 potent potent ADJ JJ Degree=Pos _ _ _ _ 33 activator activator NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 A A PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 signal signal NOUN NN Number=Sing _ _ _ _ 46 transduction transduction NOUN NN Number=Sing _ _ _ _ 47 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 67 # text = In the present study, we demonstrate that the HIV-1 DSE can mediate the transcriptional synergy elicited by the combination of Ctx and TNFalpha. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 DSE Dse NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 synergy synergy NOUN NN Number=Sing _ _ _ _ 19 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 68 # text = Ctx combined with TNFalpha or IL-1beta to produce a synergistic increase in p24 antigen production in U1 promonocytic cells. 1 Ctx Ctx NOUN NN Number=Sing _ _ _ _ 2 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 produce produce VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 p24 p24 NUM CD NumType=Card _ _ _ _ 16 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U1 U1 NUM CD NumType=Card _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 69 # text = Transfection studies of LTR reporter constructs indicated that mutation of the DSE sites abrogated the LTR-mediated synergy induced by Ctx and TNFalpha, whereas the synergy induced by Ctx and IL-1beta was unaffected, suggesting TNFalpha and IL-1beta cooperate differently with the cAMP/PKA activation pathway to induce HIV-1 expression in U1 cells. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 mutation mutation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 DSE DSE PROPN NNP Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 LTR- ltr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 synergy synergy NOUN NN Number=Sing _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 synergy synergy NOUN NN Number=Sing _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 beta beta NOUN NN Number=Sing _ _ _ _ 46 cooperate cooperate NOUN NN Number=Sing _ _ _ _ 47 differently differently ADV RB _ _ _ _ _ 48 with with ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 / / PUNCT , _ _ _ _ SpaceAfter=No 52 PKA PKa NOUN NN Number=Sing _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 pathway pathway NOUN NN Number=Sing _ _ _ _ 55 to to PART TO _ _ _ _ _ 56 induce induce VERB VB VerbForm=Inf _ _ _ _ 57 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 expression expression NOUN NN Number=Sing _ _ _ _ 61 in in ADP IN _ _ _ _ _ 62 U1 U1 PROPN NNP Number=Sing _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 70 # text = Because the DSE are also TRE sites, we assessed the effect of the agonist combinations on AP-1-dependent transcription. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DSE Dse NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 TRE Tre ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 assessed assess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 16 combinations combination NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 71 # text = TNFalpha as well as IL-1beta cooperated with Ctx to produce a synergistic activation of AP-1-mediated transcription. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 as as ADV RB _ _ _ _ _ 3 well well ADV RB Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 cooperated cooperate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 produce produce VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 72 # text = These data indicate that the TRE-like cAMP-responsive DSE sites within the 5'-untranslated leader can mediate the transcriptional cooperativity between TNFalpha and the cAMP/PKA pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 like like ADJ JJ Degree=Pos _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 DSE Dse NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' 's NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 20 leader leader NOUN NN Number=Sing _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 cooperativity cooperativity NOUN NN Number=Sing _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 PKA PKa NOUN NN Number=Sing _ _ _ _ 33 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 73 # text = Since the DSE and TRE sites cannot bind CREB/ATF homodimers, we propose a mechanism in which the HIV-1 DSE bind heterodimers composed of both AP-1 and CREB/ATF proteins. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DSE Dse NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 TRE Tre NOUN NN Number=Sing _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 8 not not PART RB _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 ATF ATF PROPN NNP Number=Sing _ _ _ _ 13 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 DSE Dse NOUN NN Number=Sing _ _ _ _ 26 bind bind ADP IN _ _ _ _ _ 27 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 28 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 ATF ATF PROPN NNP Number=Sing _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 74 # text = Copyright 1997 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1997 1997 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 75 # text = Document 0030025 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030025 0030025 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 76 # text = Signaling events induced by lipopolysaccharide-activated toll-like receptor 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 events event NOUN NNS Number=Plur _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 77 # text = 2. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 78 # text = Human Toll-like receptor 2 (TLR2) is a signaling receptor that responds to LPS and activates NF-kappaB. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 Toll toll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 like like ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TLR2 TLR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 79 # text = Here, we investigate further the events triggered by TLR2 in response to LPS. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 further further ADV RBR Degree=Cmp _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 events event NOUN NNS Number=Plur _ _ _ _ 8 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 80 # text = We show that TLR2 associates with the high-affinity LPS binding protein membrane CD14 to serve as an LPS receptor complex, and that LPS treatment enhances the oligomerization of TLR2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 5 associates associate NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 LPS Lp NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ _ 15 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 serve serve VERB VB VerbForm=Inf _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 LPS Lps PROPN NNP Number=Sing _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ _ 28 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 TLR2 TLR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 81 # text = Concomitant with receptor oligomerization, the IL-1R-associated kinase (IRAK) is recruited to the TLR2 complex. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 oligomerization oligomerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL- Il- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 1R- 1R- PUNCT , _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 recruited recruit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 82 # text = Intracellular deletion variants of TLR2 lacking C-terminal 13 or 141 aa fail to recruit IRAK, which is consistent with the inability of these mutants to transmit LPS cellular signaling. 1 Intracellular Intracelular ADJ JJ Degree=Pos _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 variants variant NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 6 lacking lack NOUN NN Number=Sing _ _ _ _ 7 C- C- SYM SYM _ _ _ _ SpaceAfter=No 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 141 141 NUM CD NumType=Card _ _ _ _ 12 aa a DET DT Typo=Yes _ _ _ _ 13 fail fail NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 recruit recruit VERB VB VerbForm=Inf _ _ _ _ 16 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 inability inability NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 mutants mutant NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 transmit transmit VERB VB VerbForm=Inf _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 cellular celular ADJ JJ Degree=Pos _ _ _ _ 31 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 83 # text = Moreover, both deletion mutants could still form complexes with wild-type TLR2 and act in a dominant-negative (DN) fashion to block TLR2-mediated signal transduction. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 still still ADV RB _ _ _ _ _ 8 form form VERB VB VerbForm=Inf _ _ _ _ 9 complexes complexe NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 act act NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 negative negative ADJ JJ Degree=Pos _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 DN DN NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 fashion fashion NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 block block VERB VB VerbForm=Inf _ _ _ _ 28 TLR2 Tlr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 signal signal NOUN NN Number=Sing _ _ _ _ 32 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 84 # text = DN constructs of myeloid differentiation protein, IRAK, TNF receptor-associated factor 6, and NF-kappaB-inducing kinase, when coexpressed with TLR2, abrogate TLR2-mediated NF-kappaB activation. 1 DN Dn ADJ JJ Degree=Pos _ _ _ _ 2 constructs construct NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 when when ADV WRB PronType=Int _ _ _ _ 26 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 abrogate abrogate ADJ JJ Degree=Pos _ _ _ _ 31 TLR2 Tlr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 85 # text = These results reveal a conserved signaling pathway for TLR2 and IL-1Rs and suggest a molecular mechanism for the inhibition of TLR2 by DN variants. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 TLR2 Tlr2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1Rs -1R PROPN NNPS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 DN Dn ADJ JJ Degree=Pos _ _ _ _ 25 variants variant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 86 # text = Document 0030026 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030026 0030026 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 87 # text = The role of p16 in the E2F-dependent thymidine kinase regulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p16 p16 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 88 # text = The role of alterations of the MTS1 tumor suppressor gene on chromosome 9p21, which encodes p16, the inhibitor of cyclin-dependent-kinase-4 and 6, in tumorigenesis is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 alterations alteration NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 MTS1 MTS1 PROPN NNP Number=Sing _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 9p21 9p21 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 tumorigenesis tumorigenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 yet yet ADV RB _ _ _ _ _ 37 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 89 # text = Phosphorylation of the retinoblastoma protein by cyclin-dependent kinases 4 and 6 prevents its interaction with the transcription factor E2F, which subsequently promotes the expression of S phase regulated genes, such as thymidine kinase. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ _ 11 4 4 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 prevents prevent NOUN NNS Number=Plur _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 subsequently subsequently ADV RB _ _ _ _ _ 25 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 S s PROPN NNP Number=Sing _ _ _ _ 30 phase phase NOUN NN Number=Sing _ _ _ _ 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 thymidine thymidine PRON PRP _ _ _ _ _ 37 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 90 # text = Although a role of p16 in this regulation has been presumed, there is no proof so far that loss of this tumor suppressor gene really affects E2F-mediated regulations. 1 Although although SCONJ IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p16 p16 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 there there PRON EX _ _ _ _ _ 14 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 proof proof ADJ JJ Degree=Pos _ _ _ _ 17 so so ADV RB _ _ _ _ _ 18 far far ADV RB Degree=Pos _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 loss loss NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 really really ADV RB _ _ _ _ _ 27 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 regulations regulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 91 # text = We investigated the regulation of thymidine kinase in phytohemagglutinin-stimulated normal human lymphocytes and in the p16-negative human acute lymphoblastic leukemia cell lines, MOLT-4 and CEM. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 thymidine thymidine PRON PRP _ _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -negative -negative ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 acute acute NOUN NN Number=Sing _ _ _ _ 22 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 MOLT Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 92 # text = Compared to normal lymphocytes, MOLT-4 and CEM cells exhibited an altered cell cycle regulation of thymidine kinase, a much higher intracellular activity of this enzyme, and higher thymidine kinase mRNA expression. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 MOLT Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CEM CEM PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 much much ADJ JJ Degree=Pos _ _ _ _ 24 higher higher ADJ JJR Degree=Cmp _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 higher higher ADV RBR Degree=Cmp _ _ _ _ 33 thymidine thymidine PRON PRP _ _ _ _ _ 34 kinase kinase VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 93 # text = Transient expression of p16 in normal human lymphocytes caused arrest in G1, but was without effect on the cell growth of MOLT-4 and CEM cells, although all of them express functional retinoblastoma protein. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p16 p16 NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 arrest arrest NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 without without ADP IN _ _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 MOLT MOLT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CEM CEM PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 although although SCONJ IN _ _ _ _ _ 31 all all DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 34 express express ADJ JJ Degree=Pos _ _ _ _ 35 functional functional ADJ JJ Degree=Pos _ _ _ _ 36 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 94 # text = Nevertheless, in the two leukemia cell lines transient overexpression of p16 reestablished the normal regulation of thymidine kinase, paralleled by an increase of the underphosphorylated form of retinoblastoma protein and decrease of free E2F bound to its motif in the thymidine kinase promoter. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 16 16 NUM CD NumType=Card _ _ _ _ 14 reestablished reestablish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thymidine thymidine PRON PRP _ _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 paralleled parallel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 underphosphorylated underphosphorylated ADJ JJ Degree=Pos _ _ _ _ 29 form form NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 decrease decrease NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 free free ADJ JJ Degree=Pos _ _ _ _ 37 E2 e2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 F F PROPN NNP Number=Sing _ _ _ _ 39 bound bound ADJ JJ Degree=Pos _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 motif motif NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 46 kinase kinase NOUN NN Number=Sing _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 95 # text = We demonstrate that loss of p16 causes upregulation of this DNA precursor pathway enzyme via activation of E2F by a mechanism involving retinoblastoma protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p16 p16 NUM CD NumType=Card _ _ _ _ 7 causes cause NOUN NNS Number=Plur _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 15 via via ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 F F PROPN NNP Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 involving involve VERB VBG VerbForm=Ger _ _ _ _ 24 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 96 # text = Document 0030027 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030027 0030027 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 97 # text = Modulation of endogenous IL-1 beta and IL-1 receptor antagonist results in opposing effects on HIV expression in chronically infected monocytic cells. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 opposing oppose ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 chronically chronically ADV RB _ _ _ _ _ 23 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 98 # text = A proportion of HIV-infected individuals experience episodes of localized or systemic bacterial infections caused by Gram-negative bacteria. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 proportion proportion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 5 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 individuals individual NOUN NNS Number=Plur _ _ _ _ 7 experience experience NOUN NN Number=Sing _ _ _ _ 8 episodes episode NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 infections infection NOUN NNS Number=Plur _ _ _ _ 15 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 Gram Gram PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 bacteria bacterion NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 99 # text = Many of the clinical side effects of these infections are associated with the production of proinflammatory cytokines, which are induced primarily by LPS, a constituent of the bacterial cell wall of Gram-negative bacteria. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 side side NOUN NN Number=Sing _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 infections infection NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 primarily primarily ADV RB _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 constituent constituent NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 wall wall NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Gram- Gram- SYM NFP _ _ _ _ SpaceAfter=No 35 negative negative ADJ JJ Degree=Pos _ _ _ _ 36 bacteria bacteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 100 # text = The present study examines the mechanisms involved in LPS-mediated induction of HIV expression in U1 cells, a promonocytic cell line chronically infected with HIV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 examines examine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 involved involve ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 U1 U1 PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 chronically chronically ADV RB _ _ _ _ _ 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 101 # text = Stimulation of U1 cells by LPS alone induced minimal levels of HIV expression, which was significantly enhanced by granulocyte-macrophage colony-stimulating factor (GM-CSF). 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U1 U1 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 alone alone ADV RB _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 102 # text = Costimulation of U1 cells with LPS plus GM-CSF resulted in the accumulation of steady-state levels of HIV RNA; however, only a weak induction of HIV long terminal repeat-driven transcription, which was not associated with the activation of the cellular transcription factor nuclear factor-kappa B, was noted. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U1 U1 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 plus plus CCONJ CC _ _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 state state NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 however however ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 weak weak ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ _ 32 long long ADJ JJ Degree=Pos _ _ _ _ 33 terminal terminal NOUN NN Number=Sing _ _ _ _ 34 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 not not PART RB _ _ _ _ _ 42 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 49 transcription transcription NOUN NN Number=Sing _ _ _ _ 50 factor factor NOUN NN Number=Sing _ _ _ _ 51 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa NOUN NN Number=Sing _ _ _ _ 55 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 58 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 103 # text = Costimulation of cells with LPS plus GM-CSF induced the production of proinflammatory cytokines, IL-8, IL-1 beta and IL-6, but not TNF-alpha. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 plus plus CCONJ CC _ _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 104 # text = IL-1 receptor antagonist (ra) inhibited LPS enhancement of HIV expression in GM-CSF-stimulated cells, suggesting that endogenous IL-1 was involved in LPS-mediated viral production. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ra ra X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 105 # text = In this regard, anti-inflammatory cytokines inhibited LPS plus GM-CSF-stimulated HIV expression, and this effect closely correlated with inhibition of IL-1 beta release and, in particular, with up-regulation of endogenous IL-1ra production. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 LPS Lp NOUN NNS Number=Plur _ _ _ _ 9 plus plus CCONJ CC _ _ _ _ _ 10 GM- GM- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 closely closely ADV RB _ _ _ _ _ 21 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 release release NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 regulation regulation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ra ra NOUN NN Number=Sing _ _ _ _ 44 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 106 # text = Thus, the balance between an endogenously produced viral inducer (IL-1 beta ) and an inhibitor (IL-1ra) may represent an important pathway leading to modulation of 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 balance balance NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 endogenously endogenously ADV RB _ _ _ _ _ 8 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 inducer inducer NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1ra 1ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 represent represent VERB VB VerbForm=Inf _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 modulation modulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ # sent_id = 107 # text = HIV expression from monocytic cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 108 # text = Document 0030028 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030028 0030028 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 109 # text = Activation of the Janus kinase 3-STAT5a pathway after CD40 triggering of human monocytes but not of resting B cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Janus Janus PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pathway pathway NOUN NN Number=Sing _ _ _ _ 11 after after SCONJ IN _ _ _ _ _ 12 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 13 triggering triggering VERB VBG VerbForm=Ger _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 resting rest VERB VBG VerbForm=Ger _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 110 # text = CD40/CD40 ligand interactions play a key role in the immune responses of B lymphocytes, monocytes, and dendritic cells. 1 CD40/CD40 CD40/CD40 NUM CD NumType=Card _ _ _ _ 2 ligand ligand NOUN NN Number=Sing _ _ _ _ 3 interactions interaction NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 key key ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ _ 11 responses response NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 111 # text = The signal transduction events triggered by cross-linking of the CD40 receptor have been widely studied in B cell lines, but little is known about signaling following CD40 stimulation of monocytes and resting tonsillar B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -linking -linking NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 widely widely ADV RB _ _ _ _ _ 16 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 about about SCONJ IN _ _ _ _ _ 27 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 28 following follow VERB VBG VerbForm=Ger _ _ _ _ 29 CD40 CD40 NUM CD NumType=Card _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 resting rest VERB VBG VerbForm=Ger _ _ _ _ 35 tonsillar tonsillar NOUN NN Number=Sing _ _ _ _ 36 B b ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 112 # text = Therefore, we studied the CD40 pathway in highly purified human monocytes and resting B cells. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 highly highly ADV RB _ _ _ _ _ 10 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 resting rest VERB VBG VerbForm=Ger _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 113 # text = After CD40 triggering, a similar activation of the NF-kappaB (but not of the AP-1) transcription factor complex occurred in both cell preparations. 1 After after SCONJ IN _ _ _ _ _ 2 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 3 triggering triggering VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 both both DET DT _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 preparations preparation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 114 # text = However, the components of the NF-kappaB complexes were different in monocytes and B cells, because p50 is part of the NF-kappaB complex induced by CD40 triggering in both monocytes and B cells, whereas p65 was only induced in B cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 components component NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 32 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 both both DET DT _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 whereas whereas SCONJ IN _ _ _ _ _ 41 p65 p65 NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 only only ADV RB _ _ _ _ _ 44 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 B b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 115 # text = In contrast, although the Janus kinase 3 tyrosine kinase was associated with CD40 molecules in both monocytes and resting B cells, Janus kinase 3 phosphorylation induction was observed only in CD40-activated monocytes, with subsequent induction of STAT5a DNA binding activity in the nucleus. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Janus Janus PROPN NNP Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CD40 CD40 NUM CD NumType=Card _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 resting rest VERB VBG VerbForm=Ger _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Janus Janus PROPN NNP Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ _ 45 binding binde VERB VBG VerbForm=Ger _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 116 # text = These results suggest that the activation signals in human B cells and monocytes differ following CD40 stimulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 CD40 CD40 NUM CD NumType=Card _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 117 # text = This observation is consistent with the detection of normal CD40-induced monocyte activation in patients with CD40 ligand+ hyper IgM syndrome in whom a defect in CD40-induced 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 detection detection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 CD40 CD40 NUM CD NumType=Card _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 hyper hyper NOUN NN Number=Sing _ _ _ _ 22 IgM Igm NOUN NN Number=Sing _ _ _ _ 23 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 whom whom PRON WP PronType=Rel _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 defect defect NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 118 # text = B cell activation has been reported. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 119 # text = Document 0030029 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030029 0030029 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 120 # text = Identification of an I kappa B alpha-associated protein kinase in a human monocytic cell line and determination of its phosphorylation sites on I kappa B alpha. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X GW _ _ _ _ _ 6 B B X GW _ _ _ _ _ 7 alpha alpha X GW _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 determination determination NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B B PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 121 # text = Nuclear factor kappa B (NF-kappa B) is stored in the cytoplasm as an inactive form through interaction with I kappa B. Stimulation of cells leads to a rapid phosphorylation of I kappa B alpha, which is presumed to be important for the subsequent degradation. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 stored store VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 19 form form NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ _ 26 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 be be AUX VB VerbForm=Inf _ _ _ _ 45 important important ADJ JJ Degree=Pos _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 49 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 122 # text = We have recently reported the establishment of a lipopolysaccharide (LPS)-dependent cell-free activation system of NF-kappa B in association with the induction of I kappa B alpha phosphorylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 establishment establishment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 free free ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 system system NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 association association NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha ADP IN _ _ _ _ _ 35 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 123 # text = In this study, we have identified a kinase in cell extracts from the LPS-stimulated human monocytic cell line, THP-1, that specifically binds and phosphorylates I kappa B alpha. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 specifically specifically ADV RB _ _ _ _ _ 29 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 phosphorylates phosphorylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa X FW Foreign=Yes _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 124 # text = LPS stimulation transiently enhanced the I kappa B alpha-bound kinase activity in THP-1 cells. 1 LPS Lps NOUN NN Number=Sing _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 transiently transiently ADV RB _ _ _ _ _ 4 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bound bound ADJ JJ Degree=Pos _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 125 # text = Mutational analyses of I kappa B alpha and competition experiments with the synthetic peptides identified major phosphorylation sites by the bound kinase as Ser and Thr residues in the C-terminal acidic domain of I kappa B alpha. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X FW Foreign=Yes _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 competition competition NOUN NN Number=Sing _ _ _ _ 10 experiments experiment NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 14 peptides peptide NOUN NNS Number=Plur _ _ _ _ 15 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 Ser Ser PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Thr Thr PROPN NNP Number=Sing _ _ _ _ 27 residues residue NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 32 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 33 domain domain NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B B PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 126 # text = Moreover, we show that the peptide, corresponding to the C-terminal acidic domain of I kappa B alpha, blocked the LPS-induced NF-kappa B activation as well as inducible phosphorylation of endogenous I kappa B alpha in a cell-free system using THP-1 cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 14 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 39 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 40 kappa kappa PROPN NNP Number=Sing _ _ _ _ 41 B b PROPN NNP Number=Sing _ _ _ _ 42 alpha alpha NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 free free ADJ JJ Degree=Pos _ _ _ _ 48 system system NOUN NN Number=Sing _ _ _ _ 49 using using VERB VBG VerbForm=Ger _ _ _ _ 50 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 127 # text = These results suggested that the bound kinase is involved in the signaling pathway of LPS by inducing the phosphorylation of the C-terminal region of 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 LPS LPS PROPN NNP Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ # sent_id = 128 # text = I kappa B alpha and subsequent dissociation of the NF-kappa B.I kappa B alpha complex. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 7 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X FW Foreign=Yes _ _ _ _ 16 B b X LS _ _ _ _ _ 17 alpha alpha X FW Foreign=Yes _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 129 # text = Document 00300210 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300210 00300210 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 130 # text = Regulation of interleukin-1beta transcription by Epstein-Barr virus involves a number of latent proteins via their interaction with RBP. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Barr Barr PROPN NNP Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 latent latent ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 131 # text = Epstein-Barr virus (EBV) infects B cells, resulting in the outgrowth of immortalised lymphoblastoid cell lines (LCLs). 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 resulting result VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 outgrowth outgrowth NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 immortalised immortalise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LCLs LCL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 132 # text = Here, we demonstrate through the use of intracellular staining that interleukin-1beta (IL-1beta) is expressed in LCLs and investigate the influence of the individual latent proteins on the expression of IL-1beta. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 staining staining NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 LCLs LCLs NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 individual individual ADJ JJ Degree=Pos _ _ _ _ 32 latent latent ADJ JJ Degree=Pos _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 133 # text = Using RT-PCR, IL-1beta was shown to be up-regulated in EBV-transformed LCLs as well as in group III Burkitt's lymphoma (BL) cell lines, compared with group I BL cell lines. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 up up ADP IN _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 LCLs LCL NOUN NNS Number=Plur _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 III iii PROPN NNP Number=Sing _ _ _ _ 28 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 's 's PART POS _ _ _ _ _ 30 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 group group NOUN NN Number=Sing _ _ _ _ 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 41 BL Bl AUX MD VerbForm=Fin _ _ _ _ 42 cell cell VERB VB VerbForm=Inf _ _ _ _ 43 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 134 # text = The up-regulation of IL-1beta message could be mediated by the latent membrane protein-1, EBV nuclear proteins 2, 3, 4, and 6 genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 message message NOUN NN Number=Sing _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 latent latent ADJ JJ Degree=Pos _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 EBV EBV VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 6 6 NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 135 # text = Electrophoretic mobility shift assays (EMSAs) demonstrated that the -300 region of the IL-1beta promoter, which contains a nuclear factor-kappaB (NF-kappaB) binding site, contained a functional RBP binding site. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 300 300 NUM CD NumType=Card _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 RBP Rbp PROPN NNP Number=Sing _ _ _ _ 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 136 # text = Binding of RBP to this site could be inhibited by addition of EBV nuclear proteins 3 and 6, suggesting that these proteins displace RBP from its recognition sequence, removing transcriptional repression and allowing gene transcription to occur. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RBP RBP PROPN NNP Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 addition addition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 displace displace VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 RBP Rbp PROPN NNP Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 recognition recognition NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 removing remove VERB VBG VerbForm=Ger _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repression repression NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 36 gene gene ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 occur occur VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 137 # text = In group I BL cells, containing low levels of NF-kappaB, only RBP binding was observed in EMSAs, whereas NF-kappaB binding could be demonstrated in EBV-transformed B cell lines containing high levels of activated NF-kappaB. 1 In in ADP IN _ _ _ _ _ 2 group group NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 BL Bl VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 low low ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 RBP RBP PROPN NNP Number=Sing _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 lines line NOUN NNS Number=Plur _ _ _ _ 38 containing contain VERB VBG VerbForm=Ger _ _ _ _ 39 high high ADJ JJ Degree=Pos _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 138 # text = In addition, the expression of latent membrane protein-1 led to activation of NF-kappaB that was capable of binding the IL-1beta promoter. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 capable capable ADJ JJ Degree=Pos _ _ _ _ 22 of of SCONJ IN _ _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 139 # text = The study demonstrates that EBV can up-regulate IL-1beta expression, possibly by using RBP, NF-kappaB, or both. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 up up ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 possibly possibly ADV RB _ _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 both both DET DT _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 140 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press Press PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 141 # text = Document 00300211 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300211 00300211 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 142 # text = Uncoupling activation-dependent HS1 phosphorylation from nuclear factor of activated T cells transcriptional activation in Jurkat T cells: differential signaling through CD3 and the costimulatory receptors CD2 and CD28. CD3, CD2, and CD28 are functionally distinct receptors on T lymphocytes. 1 Uncoupling Uncoupl VERB VBG VerbForm=Ger _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 HS1 Hs1 NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 differential differential ADJ JJ Degree=Pos _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 28 receptors receptor NOUN NNS Number=Plur _ _ _ _ 29 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CD28. CD28. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n 32 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 functionally functionally ADV RB _ _ _ _ _ 40 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 41 receptors receptor NOUN NNS Number=Plur _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 143 # text = Engagement of any of these receptors induces the rapid tyrosine phosphorylation of a shared group of intracellular signaling proteins, including Vav, Cbl, p85 phosphoinositide 3-kinase, and the Src family kinases Lck and Fyn. Ligation of CD3 also induces the tyrosine phosphorylation of HS1, a 75-kDa hematopoietic cell-specific intracellular signaling protein of unknown function. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 group group NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 p85 p85 NUM CD NumType=Card _ _ _ _ 27 phosphoinositide phosphoinositide NOUN NN Number=Sing _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT : _ _ _ _ SpaceAfter=No 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 Src Src ADJ JJ Degree=Pos _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 kinases kinase NOUN NNS Number=Plur _ _ _ _ 37 Lck Lck PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 Fyn Fyn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ 41 Ligation Ligation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 44 also also ADV RB _ _ _ _ _ 45 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 48 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 HS1 HS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kDa kDa NOUN NN Number=Sing _ _ _ _ 56 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 57 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 specific specific ADJ JJ Degree=Pos _ _ _ _ 60 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 61 signaling signale NOUN NN Number=Sing _ _ _ _ 62 protein protein NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 65 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 144 # text = We have examined changes in HS1 phosphorylation after differential stimulation of CD3, CD2, and CD28 to elucidate its role in T cells and to further delineate the signaling pathways recruited by these receptors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 changes change NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HS1 HS1 NUM CD NumType=Card _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 further further ADV RB _ _ _ _ _ 28 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 signaling signal NOUN NN Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ _ 32 recruited recruit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 145 # text = Unlike ligation of CD3, stimulation with anti-CD28 mAb or CHO cells expressing the CD28 ligands CD80 or CD86 did not lead to tyrosine phosphorylation of HS1 in Jurkat T cells. 1 Unlike unlike ADP IN _ _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 9 mAb mAb NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 CHO Cho NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 expressing express VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 16 ligands ligand VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 CD86 CD86 PROPN NNP Number=Sing _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 lead lead VERB VB VerbForm=Inf _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 tyrosine tyrosine VERB VB VerbForm=Inf _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HS1 HS1 PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 146 # text = Additionally, no tyrosine phosphorylation of HS1 was induced by mitogenic pairs of anti-CD2 mAbs capable of activating the transcription factor NFAT (nuclear factor of activated T cells). 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HS1 Hs1 PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 12 pairs pair NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 15 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 16 capable capable ADJ JJ Degree=Pos _ _ _ _ 17 of of SCONJ IN _ _ _ _ _ 18 activating activat VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 147 # text = Costimulation through CD28 and/or CD2 did not modulate the CD3-dependent phosphorylation of HS1. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 or or CCONJ CC _ _ _ _ _ 7 CD2 CD2 NUM CD NumType=Card _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HS1 HS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 148 # text = In vivo studies indicated that CD3-induced HSI phosphorylation was dependent upon both the Src family tyrosine kinase Lck and the tyrosine phosphatase CD45, did not require MEK1 kinase activity, and was regulated by protein kinase C activation. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 HSI HSI NUM CD NumType=Card _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Src Src ADJ JJ Degree=Pos _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 Lck Lck NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 24 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 require require VERB VB VerbForm=Inf _ _ _ _ 29 MEK1 MEK1 NUM CD NumType=Card _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 C c NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 149 # text = Thus, although CD3, CD28, and CD2 activate many of the same signaling molecules, they differed in their capacity to induce the tyrosine phosphorylation of HSI. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD2 CD2 NUM CD NumType=Card _ _ _ _ 10 activate activate NOUN NN Number=Sing _ _ _ _ 11 many many ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 19 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 capacity capacity NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 induce induce VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HSI HSI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 150 # text = Furthermore, activation-dependent tyrosine phosphorylation of HS1 was not required for NFAT transcriptional activation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HS1 Hs1 PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 151 # text = Document 00300212 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300212 00300212 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 152 # text = Cytokine rescue from glucocorticoid induced apoptosis in T cells is mediated through inhibition of IkappaBalpha. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 rescue rescue NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 153 # text = We previously reported that dexamethasone (DEX), a synthetic glucocorticoid, causes apoptosis in mature 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 12 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 causes cause NOUN NNS Number=Plur _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ # sent_id = 154 # text = Th cell lines, and that this induction of cell death is prevented by specific cytokines, namely, by IL-2 in Th1 cells and by IL-4 in Th2 cells. 1 Th th ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 death death NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 namely namely ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Th1 Th1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Th2 Th2 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 155 # text = We now show that this differential rescue by specific cytokines in Th cells correlates with the level of IkappaBalpha that is regulated by DEX and cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 differential differential NOUN NN Number=Sing _ _ _ _ 7 rescue rescue NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Th th ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 DEX Dex PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 156 # text = In both cell types the cellular levels of IkappaBalpha mRNA and protein were evaluated by DEX treatment. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 DEX Dex PROPN NNP Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 157 # text = Interestingly, the DEX-mediated IkappaBalpha induction was completely inhibited by IL-2, but not IL-4, in Th1 cells, while the reverse profile was seen in Th2 cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 completely completely ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 IL Il ADV RB _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Th1 Th1 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 reverse reverse NOUN NN Number=Sing _ _ _ _ 30 profile profile NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Th2 Th2 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 158 # text = In both cell types, the cytokine that inhibits the induction of IkappaBalpha by DEX, also rescues these cells from DEX-induced apoptosis, although the rescue cytokine is different in Th1 and Th2 cells. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 rescues rescue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 although although SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 rescue rescue NOUN NN Number=Sing _ _ _ _ 30 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Th1 Th1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Th2 Th2 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 159 # text = Our results imply that T cells need to maintain a certain level of NF-kappaB transcriptional activity in order to survive; up- or down-regulation of nuclear NF kappaB through modulation of IkappaBalpha expression by cytokines or DEX may lead to cell survival or cell death, respectively. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 need need VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 certain certain ADJ JJ Degree=Pos _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 order order NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 survive survive VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 up up ADP IN _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ _ 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 through through ADP IN _ _ _ _ _ 35 modulation modulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 DEX DEX PROPN NNP Number=Sing _ _ _ _ 43 may may AUX MD VerbForm=Fin _ _ _ _ 44 lead lead VERB VB VerbForm=Inf _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 cell cell VERB VB VerbForm=Inf _ _ _ _ 47 survival survival NOUN NN Number=Sing _ _ _ _ 48 or or CCONJ CC _ _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 160 # text = Document 00300213 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300213 00300213 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 161 # text = Regulation of Id3 cell cycle function by Cdk-2-dependent phosphorylation. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Id3 Id3 NUM CD NumType=Card _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Cdk Cdk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 162 # text = The functions of basic helix-loop-helix (bHLH) transcription factors in activating differentiation-linked gene expression and in inducing G1 cell cycle arrest are negatively regulated by members of the Id family of HLH proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 helix helix NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 activating activate VERB VBG VerbForm=Ger _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 G1 G1 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 cycle cycle NOUN NN Number=Sing _ _ _ _ 26 arrest arrest NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 negatively negatively ADV RB _ _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 Id id PROPN NNP Number=Sing _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 HLH Hlh DET DT _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 163 # text = These bHLH antagonists are induced during a mitogenic signalling response, and they function by sequestering their bHLH targets in inactive heterodimers that are unable to bind to specific gene regulatory (E box) sequences. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 bHLH bhlh ADJ JJ Degree=Pos _ _ _ _ 3 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 9 signalling signalling NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 function function VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 sequestering sequester VERB VBG VerbForm=Ger _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 19 targets target NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 unable unable ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 bind bind VERB VB VerbForm=Inf _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 E e NOUN NN Number=Sing _ _ _ _ 34 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 164 # text = Recently, cyclin E-Cdk2- and cyclin A-Cdk2-dependent phosphorylation of a single conserved serine residue (Ser5) in Id2 has been shown to occur during late G1-to-S phase transition of the cell cycle, and this neutralizes the function of Id2 in abrogating E-box-dependent bHLH homo- or heterodimer complex formation in vitro (E.Hara, M.Hall, and G.Peters, EMBO J.16:332-342, 1997). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 4 E- e- PUNCT : _ _ _ _ SpaceAfter=No 5 Cdk2 cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 9 A-Cdk2 A-Cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ _ 16 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 serine serine NOUN NN Number=Sing _ _ _ _ 18 residue residue NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 Ser5 Ser5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Id2 id2 NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 occur occur VERB VB VerbForm=Inf _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 late late ADJ JJ Degree=Pos _ _ _ _ 31 G1 g1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 to to ADP IN _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 S s NOUN NN Number=Sing _ _ _ _ 36 phase phase NOUN NN Number=Sing _ _ _ _ 37 transition transition NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 45 neutralizes neutralize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 function function NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 Id2 Id2 NUM CD NumType=Card _ _ _ _ 50 in in SCONJ IN _ _ _ _ _ 51 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 52 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 57 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT , _ _ _ _ _ 59 or or CCONJ CC _ _ _ _ _ 60 heterodimer heterodimer ADJ JJR Degree=Cmp _ _ _ _ 61 complex complex ADJ JJ Degree=Pos _ _ _ _ 62 formation formation NOUN NN Number=Sing _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 vitro vitro PROPN NNP Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 E.Hara E.Hara PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 M.Hall M.Hall PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 and and CCONJ CC _ _ _ _ _ 71 G.Peters G.Peters PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 EMBO EMBO PROPN NNP Number=Sing _ _ _ _ 74 J.16:332-342 J.16:332-342 NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 1997 1997 NUM CD NumType=Card _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 165 # text = We now show that an analogous cell-cycle-regulated phosphorylation of Id3 alters the specificity of Id3 for abrogating both E-box-dependent bHLH homo- or heterodimer complex formation in vitro and E-box-dependent reporter gene function in vivo. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cycle-regulated cycle-regulated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Id3 Id3 NUM CD NumType=Card _ _ _ _ 13 alters alter NOUN NNS Number=Plur _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 specificity specificity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 18 for for SCONJ IN _ _ _ _ _ 19 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 26 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 heterodimer heterodimer ADJ JJR Degree=Cmp _ _ _ _ 30 complex complex ADJ JJ Degree=Pos _ _ _ _ 31 formation formation NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vitro vitro NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 function function NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 166 # text = Furthermore, compared with wild-type Id3, an Id3 Asp5 mutant (mimicking phosphorylation) is unable to promote cell cycle S phase entry in transfected fibroblasts, whereas an Id3 Ala5 mutant (ablating phosphorylation) displays an activity significantly greater than that of wild-type Id3 protein. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 Id3 Id3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 Id3 Id3 NUM CD NumType=Card _ _ _ _ 12 Asp5 asp5 NOUN NN Number=Sing _ _ _ _ 13 mutant mutant NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 mimicking mimicking NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 promote promote VERB VB VerbForm=Inf _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 cycle cycle NOUN NN Number=Sing _ _ _ _ 24 S 's PART POS _ _ _ _ _ 25 phase phase NOUN NN Number=Sing _ _ _ _ 26 entry entry NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 34 Ala5 ala5 NOUN NN Number=Sing _ _ _ _ 35 mutant mutant NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ablating ablat VERB VBG VerbForm=Ger _ _ _ _ 38 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 significantly significantly ADV RB _ _ _ _ _ 44 greater greater ADJ JJR Degree=Cmp _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 type type NOUN NN Number=Sing _ _ _ _ 51 Id3 Id3 NUM CD NumType=Card _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 167 # text = Cdk2-dependent phosphorylation therefore provides a switch during late G1-to-S phase that both nullifies an early G1 cell cycle regulatory function of Id3 and modulates its target bHLH specificity. 1 Cdk2 Cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ _ 6 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 late late ADJ JJ Degree=Pos _ _ _ _ 11 G1 G1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 to to ADP IN _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 S S NOUN NN Number=Sing _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 both both ADV RB _ _ _ _ _ 19 nullifies nullify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 G1 g1 NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Id3 Id3 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 target target NOUN NN Number=Sing _ _ _ _ 33 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 34 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 168 # text = These data also demonstrate that the ability of Id3 to promote cell cycle S phase entry is not simply a function of its ability to modulate bHLH heterodimer-dependent gene expression and establish a biologically important mechanism through which Cdk2 and 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ability ability NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 promote promote VERB VB VerbForm=Inf _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ _ 14 S 's PART POS _ _ _ _ _ 15 phase phase NOUN NN Number=Sing _ _ _ _ 16 entry entry NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 simply simply ADV RB _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 27 bHLH bHLH DET DT _ _ _ _ _ 28 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 establish establish VERB VB VerbForm=Inf _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 biologically biologically ADV RB _ _ _ _ _ 37 important important ADJ JJ Degree=Pos _ _ _ _ 38 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 39 through through ADP IN _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 Cdk2 Cdk2 NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ # sent_id = 169 # text = Id-bHLH functions are integrated in the coordination of cell proliferation and differentiation. 1 Id id ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 integrated integrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 coordination coordination NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 170 # text = Document 00300214 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300214 00300214 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 171 # text = Induction of cytokine expression in leukocytes by binding of thrombin-stimulated platelets. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thrombin- thrombin- SYM NFP _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 172 # text = BACKGROUND: Activated platelets tether and activate myeloid leukocytes. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 tether tether NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activate activate ADJ JJ Degree=Pos _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 9 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 173 # text = To investigate the potential relevance of this mechanism in acute myocardial infarction (AMI), we examined cytokine induction by leukocyte-platelet adhesion and the occurrence of leukocyte-platelet conjugates in patients with AMI. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 potential potential ADJ JJ Degree=Pos _ _ _ _ 5 relevance relevance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 12 infarction infarction NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 AMI Ami PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 platelet platelet NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 platelet platelet NOUN NN Number=Sing _ _ _ _ 33 conjugates conjugate NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 patients patient NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 174 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 175 # text = We obtained peripheral venous blood samples in 20 patients with AMI before and daily for 5 days after direct percutaneous transluminal coronary angioplasty (PTCA) and in 20 patients undergoing elective PTCA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 venous venous ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 samples sample NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 AMI AMI PROPN NNP Number=Sing _ _ _ _ 12 before before ADV RB _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 daily daily ADV RB _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ _ 17 days day NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 direct direct ADJ JJ Degree=Pos _ _ _ _ 20 percutaneous percutaneous ADJ JJ Degree=Pos _ _ _ _ 21 transluminal transluminal ADJ JJ Degree=Pos _ _ _ _ 22 coronary coronary NOUN NN Number=Sing _ _ _ _ 23 angioplasty angioplasty NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PTCA PTCA NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 20 20 NUM CD NumType=Card _ _ _ _ 30 patients patient NOUN NNS Number=Plur _ _ _ _ 31 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 32 elective elective ADJ JJ Degree=Pos _ _ _ _ 33 PTCA PTCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 176 # text = Throughout the study period, CD41 immunofluorescence of leukocytes (flow cytometry) revealed increased leukocyte-platelet adhesion in patients with AMI compared with control patients (mean +/- SE of fluorescence [channels] before PTCA: 77 +/- 16 versus 35 +/- 9; P = .003). 1 Throughout throughout ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 period period NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CD41 CD41 NUM CD NumType=Card _ _ _ _ 7 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 flow flow NOUN NN Number=Sing _ _ _ _ 12 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 platelet platelet NOUN NN Number=Sing _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 AMI AMI PROPN NNP Number=Sing _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 mean mean X GW _ _ _ _ _ 30 +/- +/- X GW _ _ _ _ _ 31 SE se NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 34 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ] ] PUNCT -RRB- _ _ _ _ _ 37 before before ADP IN _ _ _ _ _ 38 PTCA PTCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 : : PUNCT : _ _ _ _ _ 40 77 77 NUM CD NumType=Card _ _ _ _ 41 +/- +/- SYM SYM _ _ _ _ _ 42 16 16 NUM CD NumType=Card _ _ _ _ 43 versus versus ADP IN _ _ _ _ _ 44 35 35 NUM CD NumType=Card _ _ _ _ 45 +/- +/- SYM SYM _ _ _ _ _ 46 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 P p NOUN NN Number=Sing _ _ _ _ 49 = = SYM SYM _ _ _ _ _ 50 .003 .003 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 177 # text = In vitro, thrombin-stimulated fixed platelets bound to neutrophils and monocytes. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 thrombin- thrombin- PUNCT : _ _ _ _ SpaceAfter=No 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 platelets platelet NOUN NNS Number=Plur _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 178 # text = Within 2 hours, this resulted in increased mRNA for interleukin (IL),1 beta, IL-8, and monocyte chemoattractant protein (MCP)-1 in unfractionated leukocytes. 1 Within within ADP IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 ,1 ,1 NUM CD NumType=Card _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 24 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 unfractionated unfractionated ADJ JJ Degree=Pos _ _ _ _ 33 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 179 # text = After 4 hours, IL-1 beta and IL-8 concentration of the cell-free supernatant had increased by 268 +/- 36% and 210 +/- 7%, respectively, and cellular MCP-1 content had increased by 170 +/- 8%. 1 After after ADP IN _ _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 8 8 NUM CD NumType=Card _ _ _ _ 13 concentration concentration NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 free free ADJ JJ Degree=Pos _ _ _ _ 19 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 20 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 268 268 NUM CD NumType=Card _ _ _ _ 24 +/- +/- SYM SYM _ _ _ _ _ 25 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 210 210 NUM CD NumType=Card _ _ _ _ 29 +/- +/- SYM SYM _ _ _ _ _ 30 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 37 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 content content NOUN NN Number=Sing _ _ _ _ 41 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 170 170 NUM CD NumType=Card _ _ _ _ 45 +/- +/- SYM SYM _ _ _ _ _ 46 8% 8% SYM NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 180 # text = Addition of activated platelets to adherent monocytes had a similar effect and was associated with nuclear factor-kappa B activation. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 181 # text = Inhibition of binding by anti-P selectin antibodies reduced the effect of activated platelets on cytokine production. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 anti anti X AFX _ _ _ _ SpaceAfter=No 6 -P -p ADJ JJ Degree=Pos _ _ _ _ 7 selectin selectin NOUN NN Number=Sing _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 platelets platelet NOUN NNS Number=Plur _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 182 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 183 # text = In patients with AMI, leukocyte-platelet adhesion is increased. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 platelet platelet NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 increased increased VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 184 # text = Binding of activated platelets induces IL-1 beta, IL-8, and MCP-1 in leukocytes. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 185 # text = Our findings suggest that leukocyte-platelet adhesion contributes to the regulation of inflammatory responses in AMI. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 platelet platelet NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 contributes contribute NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 186 # text = Document 00300215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300215 00300215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 187 # text = Paternal expression of WT1 in human fibroblasts and lymphocytes. 1 Paternal Paternal ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 WT1 wt1 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 188 # text = The Wilms' tumor suppressor gene ( WT1 ) was previously identified as being imprinted, with frequent maternal expression in human placentae and fetal brains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Wilms Wilm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ' 's PART POS _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ _ 8 WT1 wt1 PROPN NNP Number=Sing _ _ _ _ 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 being be AUX VBG VerbForm=Ger _ _ _ _ 15 imprinted imprinted VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 19 maternal maternal ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 placentae placenta NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 26 brains brain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 189 # text = We examined the allele-specific expression of WT1 in cultured human fibroblasts from 15 individuals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 WT1 WT1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cultured culture ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 15 15 NUM CD NumType=Card _ _ _ _ 16 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 190 # text = Seven of 15 fibroblast lines were heterozygous for polymorphic alleles, and the expression patterns were variable, i.e., equal, unequal or monoallelic paternal expression in three, two and two cases, respectively. 1 Seven Seven PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 15 15 NUM CD NumType=Card _ _ _ _ 4 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 heterozygous heterozygous ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 10 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 patterns pattern NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 variable variable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 equal equal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 unequal unequal ADJ JJ Degree=Pos _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 26 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 two two NUM CD NumType=Card _ _ _ _ 34 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 191 # text = Exclusive paternal expression of WT1 was also shown in non-cultured peripheral lymphocytes from the latter two individuals. 1 Exclusive Exclusive ADJ JJ Degree=Pos _ _ _ _ 2 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 non-cultured non-cultured ADJ JJ Degree=Pos _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 latter latter ADJ JJ Degree=Pos _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 192 # text = The allele-specific expression profiles of other imprinted genes, IGF2 and H19, on human chromosome 11 were constant and consistent with those in other tissues. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 profiles profile NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 imprinted imprint VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IGF2 Igf2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 H19 h19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 19 11 11 NUM CD NumType=Card _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 constant constant ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 193 # text = Our unexpected observations of paternal or biallelic expression of WT1 in fibroblasts and lymphocytes, together with the previous findings of maternal or biallelic expression in placentae and brains, suggest that the allele-specific regulatory system of WT1 is unique and may be controlled by a putative tissue- and individual-specific modifier. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 unexpected unexpected ADJ JJ Degree=Pos _ _ _ _ 3 observations observation NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 biallelic biallelic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 WT1 wt1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 together together ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 previous previous ADJ JJ Degree=Pos _ _ _ _ 20 findings finding NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 maternal maternal ADJ JJ Degree=Pos _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 biallelic biallelic ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 placentae placenta NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 brains brains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 38 system system NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 WT1 wt1 NUM CD NumType=Card _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 unique unique ADJ JJ Degree=Pos _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 may may AUX MD VerbForm=Fin _ _ _ _ 45 be be AUX VB VerbForm=Inf _ _ _ _ 46 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 putative putative ADJ JJ Degree=Pos _ _ _ _ 50 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 individual individual ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 specific specific ADJ JJ Degree=Pos _ _ _ _ 56 modifier modifier NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 194 # text = Document 00300216 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300216 00300216 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 195 # text = Overproduction of NFKB2 (lyt-10) and c-Rel: a mechanism for HTLV-I Tax-mediated trans-activation via the NF-kappa B signalling pathway. 1 Overproduction Overproduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 lyt lyt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 -activation -activation NOUN NN Number=Sing _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 32 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 196 # text = Molecular, biochemical and epidemiological evidence implicate HTLV-I as an etiologic agent of adult T cell leukemia (ATL). 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 epidemiological epidemiological ADJ JJ Degree=Pos _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 implicate implicate ADJ JJ Degree=Pos _ _ _ _ 8 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 14 agent agent NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 adult adult NOUN NN Number=Sing _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell PROPN NNP Number=Sing _ _ _ _ 19 leukemia leukemia PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 197 # text = The Tax protein of HTLV-I, a positive transcriptional activator of HTLV-I gene expression, is a viral oncogene that also increases transcription of cellular genes including GM-CSF, IL-2R alpha and IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tax tax NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2R 2R PROPN NNP Number=Sing _ _ _ _ 39 alpha alpha PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 198 # text = One of the cellular targets of the trans-activating effects of Tax is the NF-kappa B/Rel family of transcription factors, pleiotropic regulators of immunoregulatory, cytokine and viral gene expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 targets target NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 activating activate VERB VBG VerbForm=Ger _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 Rel Rel PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 28 regulators regulator NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 199 # text = In this report, we demonstrate that NFKB2 (lyt-10) and c-Rel are overexpressed in HTLV-I infected and Tax-expressing cells and, together, account for the majority of the constitutive NF-kappa B binding activity in these cells before and after PMA stimulation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 lyt lyt NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 infected infect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 expressing express VERB VBG VerbForm=Ger _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 together together ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 account account VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 majority majority NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 41 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 binding binde VERB VBG VerbForm=Ger _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 before before ADP IN _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 after after ADP IN _ _ _ _ _ 53 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 54 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 200 # text = Most importantly, we show a Tax-dependent correlation between expression of NFKB2(p100) and processing to the DNA binding NFKB2(p52) form, induction of c-Rel, and trans-activation of NF-kappa B-mediated gene expression. 1 Most most ADV RBS _ _ _ _ _ 2 importantly importantly ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 correlation correlation NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p100 p100 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 processing process VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa PROPN NNP Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 201 # text = Furthermore, the NFKB2 precursor is physically associated with c-Rel and with Tax in HTLV-I infected cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 physically physically ADV RB _ _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Tax tax NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 202 # text = We propose that NFKB2 synthesis and processing allows continuous nuclear expression of an otherwise cytoplasmic protein and, in conjunction with overexpression of c-Rel, NFKB2 alters the NF-kappa B signalling pathway and contributes to leukemic transformation of T cells by HTLV-I. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NFKB2 Nfkb2 NUM CD NumType=Card _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 processing processing VERB VBG VerbForm=Ger _ _ _ _ 8 allows allow NOUN NNS Number=Plur _ _ _ _ 9 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 otherwise otherwise ADV RB _ _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ _ 29 alters alter NOUN NNS Number=Plur _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 contributes contribute NOUN NNS Number=Plur _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 41 transformation transformation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 203 # text = Document 00300217 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300217 00300217 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 204 # text = Abnormal regulation of the IL-2 promoter in lpr CD4-CD8- T lymphocytes results in constitutive expression of a novel nuclear factor of activated T cells-binding factor. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lpr lpr ADJ JJ Degree=Pos _ _ _ _ 11 CD4-CD8 CD4-CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 novel novel NOUN NN Number=Sing _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 205 # text = The inert quality of MRL-Ipr/Ipr (Ipr) peripheral CD4-CD8- (CD4-8-) T cells manifests primarily as an inability to proliferate or produce IL-2 in response to TCR or mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inert inert ADJ JJ Degree=Pos _ _ _ _ 3 quality quality NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 MRL MRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Ipr Ipr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Ipr Ipr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 CD4-CD8 Cd4-cd8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8-) 8-) SYM NFP _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 manifests manifest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 primarily primarily ADV RB _ _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 inability inability NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 produce produce VERB VB VerbForm=Inf _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 TCR TCR PROPN NNP Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 40 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 206 # text = Yet these same cells do initiate early TCR-mediated signaling events, such as generation of inositol phosphates and increased intracellular calcium. 1 Yet yet CCONJ CC _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 7 early early ADV RB Degree=Pos _ _ _ _ 8 TCR TCR ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 generation generation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 inositol inositol ADJ JJ Degree=Pos _ _ _ _ 19 phosphates phosphate NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 207 # text = They also display constitutively high levels of p59fyn and CD3 zeta tyrosine phosphorylation. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p5 p5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 9fyn 9fyn NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 CD3 CD3 NUM CD NumType=Card _ _ _ _ 12 zeta zeta NOUN NN Number=Sing _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 208 # text = The generation of second messengers in T cells normally leads to downstream signaling that results in transcriptional activation of the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 messengers messenger NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 normally normally ADV RB _ _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 downstream downstream VERB VB VerbForm=Inf _ _ _ _ 13 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 209 # text = We, therefore, compared the activation state of the IL-2 gene promoter region in freshly isolated and stimulated Ipr CD4-8- T cells with that of normal T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 state state NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 freshly freshly ADV RB _ _ _ _ _ 19 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 T t NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 normal normal ADJ JJ Degree=Pos _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 210 # text = Levels of the octamer, NF-kappa B (p50-p65 heterodimer), and AP-1 transcriptional factors are constitutively elevated in freshly isolated Ipr CD4-8- T cells, consistent with the activated phenotype of these cells. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B B NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 freshly freshly ADV RB _ _ _ _ _ 28 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 30 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 T t NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 211 # text = Upon stimulation with mitogens, formation of the transactivating complex, nuclear factor of activated T cells (NF-AT), occurs with normal kinetics in Ipr CD4-8- T cells. 1 Upon upon ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 occurs occur NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 30 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 T t NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 212 # text = Yet, the levels of the activating NF-AT complex never reach those observed in similarly stimulated normal T cells. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activating activate VERB VBG VerbForm=Ger _ _ _ _ 8 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT AT NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 never never ADV RB _ _ _ _ _ 13 reach reach VERB VB VerbForm=Inf _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADV RB _ _ _ _ _ 17 similarly similarly ADV RB _ _ _ _ _ 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 213 # text = Furthermore, nuclear extracts from Ipr CD4-8- T cells display high levels of a novel specific binding activity at the NF-AT site, which is present at much lower levels in freshly isolated normal T lymphocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 AT AT PROPN NNP Number=Sing _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 present present ADJ JJ Degree=Pos _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 much much ADV RB _ _ _ _ _ 33 lower lower ADJ JJR Degree=Cmp _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 freshly freshly ADV RB _ _ _ _ _ 37 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 normal normal ADJ JJ Degree=Pos _ _ _ _ 39 T t NOUN NN Number=Sing _ _ _ _ 40 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 214 # text = Upon mitogenic stimulation, the binding activity of the novel NF-AT-binding factor is rapidly down-regulated in normal T cells, but persists at high levels in Ipr CD4-8- T cells. 1 Upon upon ADP IN _ _ _ _ _ 2 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 novel novel PROPN NNP Number=Sing _ _ _ _ 11 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT At NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 rapidly rapidly ADV RB _ _ _ _ _ 19 down down ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 persists persist NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 34 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ _ 37 T t NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 215 # text = These two abnormalities at the NF-AT site provide a potential mechanism to account for the defect in IL-2 production from Ipr CD4-8- T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 provide provide VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 account account VERB VB VerbForm=Inf _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 defect defect NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 26 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ _ 29 T t NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 216 # text = Document 00300218 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300218 00300218 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 217 # text = Impaired fetal thymocyte development after efficient adenovirus-mediated inhibition of NF-kappa B activation. 1 Impaired Impaire ADJ JJ Degree=Pos _ _ _ _ 2 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 3 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 7 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 218 # text = We introduce a new experimental system combining adenovirus-mediated gene transfer and fetal thymic organ culture (FTOC). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 introduce introduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 6 system system NOUN NN Number=Sing _ _ _ _ 7 combining combi VERB VBG VerbForm=Ger _ _ _ _ 8 adenovirus adenovirus ADP IN _ _ _ _ SpaceAfter=No 9 -mediated -mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transfer transfer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 14 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 15 organ organ ADJ JJ Degree=Pos _ _ _ _ 16 culture culture NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 219 # text = This system allowed us to efficiently express in developing thymocytes a mutant form of the NF-kappa B inhibitor 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 system system NOUN NN Number=Sing _ _ _ _ 3 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 efficiently efficiently ADV RB _ _ _ _ _ 7 express express VERB VB VerbForm=Inf _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 developing develop VERB VBG VerbForm=Ger _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 13 form form NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 220 # text = I kappa B alpha (mut-I kappa B) and to study the maturation defects occurring when NF-kappa B activation is inhibited during fetal development. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 study study VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 maturation maturation NOUN NN Number=Sing _ _ _ _ 17 defects defect NOUN NNS Number=Plur _ _ _ _ 18 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 NF NF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 221 # text = Fetal thymocytes infected with adenovirus containing mut-I kappa B were found to develop normally until the CD44-CD25+, CD4-CD8- double-negative stage, while production of more mature double-positive and single-positive populations was strongly decreased. 1 Fetal Fetal ADJ JJ Degree=Pos _ _ _ _ 2 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 6 containing containing VERB VBG VerbForm=Ger _ _ _ _ 7 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 develop develop VERB VB VerbForm=Inf _ _ _ _ 16 normally normally ADV RB _ _ _ _ _ 17 until until ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD44-CD25+ Cd44-cd25+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 CD4-CD8 Cd4-cd8 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ _ 23 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 negative negative ADJ JJ Degree=Pos _ _ _ _ 26 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 while while SCONJ IN _ _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 mature mature ADJ JJ Degree=Pos _ _ _ _ 33 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 positive positive ADJ JJ Degree=Pos _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 positive positive ADJ JJ Degree=Pos _ _ _ _ 40 populations population NOUN NNS Number=Plur _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 strongly strongly ADV RB _ _ _ _ _ 43 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 222 # text = Proliferation, as measured by the percentage of cells in cycle appeared normal, as did rearrangement and expression of the TCR beta-chain. 1 Proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 percentage percentage NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cycle cycle NOUN NN Number=Sing _ _ _ _ 12 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR TCR PROPN NNP Number=Sing _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 223 # text = However, apoptosis was much higher in FTOC infected with adenovirus containing mut-I kappa B than in FTOC infected with a control virus. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 much much ADV RB _ _ _ _ _ 6 higher higher ADJ JJR Degree=Cmp _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 FTOC FTOC PROPN NNP Number=Sing _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 12 containing containing VERB VBG VerbForm=Ger _ _ _ _ 13 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 FTOC FTOC PROPN NNP Number=Sing _ _ _ _ 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 control control NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 224 # text = Taken together, these results suggest that NF-kappa B plays a crucial role in ensuring the differentiation and survival of thymocytes in the early stages of their development. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 ensuring ensure VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 survival survival NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 stages stage NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 225 # text = Document 00300219 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300219 00300219 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 226 # text = An IL-2 response element in the human IL-2 receptor alpha chain promoter is a composite element that binds Stat5, Elf-1, HMG-I(Y) and a GATA family protein. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 composite composite ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 GATA GATa PROPN NNP Number=Sing _ _ _ _ 37 family family NOUN NN Number=Sing _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 227 # text = Expression of the human interleukin-2 (IL-2) receptor alpha chain gene is potently upregulated by its own ligand, IL-2. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 potently potently ADV RB _ _ _ _ _ 19 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 own own ADJ JJ Degree=Pos _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 228 # text = In this study, we characterize an essential upstream IL-2 response element that contains both consensus and non-consensus GAS motifs, two putative Ets binding sites (EBS), one of which overlaps the consensus GAS motif, and a GATA motif, which overlaps the non-consensus GAS motif. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 characterize characterize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 non-consensus non-consensus ADJ JJ Degree=Pos _ _ _ _ 21 GAS gas NOUN NNS Number=Plur _ _ _ _ 22 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 putative putative ADJ JJ Degree=Pos _ _ _ _ 26 Ets Et NOUN NNS Number=Plur _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 consensus consensus NOUN NN Number=Sing _ _ _ _ 39 GAS gas NOUN NN Number=Sing _ _ _ _ 40 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 GATA GATa PROPN NNP Number=Sing _ _ _ _ 45 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 which which PRON WDT PronType=Rel _ _ _ _ 48 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 non-consensus non-consensus ADJ JJ Degree=Pos _ _ _ _ 51 GAS gas NOUN NN Number=Sing _ _ _ _ 52 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 229 # text = We demonstrate that although the individual components of this element do not respond to IL-2, together they form a composite element capable of conferring IL-2 responsiveness to a heterologous promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 respond respond VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 together together SCONJ IN _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 composite composite NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 capable capable ADJ JJ Degree=Pos _ _ _ _ 26 of of SCONJ IN _ _ _ _ _ 27 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 230 # text = Multiple factors including Stat5, Elf-1, HMG-I(Y) and GATA family proteins bind to the IL-2 response element and mutation of any one of these binding sites diminishes the activity of this element. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 including include VERB VBG VerbForm=Ger _ _ _ _ 4 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mutation mutation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 any any DET DT _ _ _ _ _ 31 one one NUM CD NumType=Card _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 diminishes diminish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 231 # text = An unidentified Ets family protein binds to the EBS overlapping the consensus GAS motif and appears to negatively regulate the human IL-2R alpha promoter. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 3 Ets Ets NOUN NNS Number=Plur _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 binds bind NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 EBS Eb PROPN NNP Number=Sing _ _ _ _ 10 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 GAS gas NOUN NN Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 negatively negatively ADV RB _ _ _ _ _ 19 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 R r NOUN NN Number=Sing _ _ _ _ 26 alpha alpha ADP IN _ _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 232 # text = Thus, IL-2-induced IL-2R alpha promoter activity requires a complex upstream element, which appears to contain binding sites for both positive and negative regulatory factors. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2r PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 complex complex ADJ JJ Degree=Pos _ _ _ _ 17 upstream upstream NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 contain contain VERB VB VerbForm=Inf _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 positive positive ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 negative negative ADJ JJ Degree=Pos _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 233 # text = Document 00300220 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300220 00300220 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 234 # text = Genomic organization, sequence, and transcriptional regulation of the human eotaxin gene. 1 Genomic Genomic ADJ JJ Degree=Pos _ _ _ _ 2 organization organization NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 eotaxin eotaxin NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 235 # text = Eotaxin is an eosinophil specific beta-chemokine assumed to be involved in eosinophilic inflammatory diseases such as atopic dermatitis, allergic rhinitis, asthma and parasitic infections. 1 Eotaxin Eotaxin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 eosinophil eosinophil ADJ JJ Degree=Pos _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 9 assumed assume VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 20 dermatitis dermatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 23 rhinitis rhinitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 asthma asthma NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 parasitic parasitic ADJ JJ Degree=Pos _ _ _ _ 28 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 236 # text = Its expression is stimulus- and cell-specific. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 stimulus stimulus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 237 # text = We here describe the genomic organisation (3 exons of 132, 112 and 542 bp and 2 introns of 1211 and 378 bp) and sequence including 3 kb of DNA from the immediate 5' upstream region of the human eotaxin gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 here here ADV RB PronType=Dem _ _ _ _ 3 describe describe VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 organisation organisation NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 exons exon NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 132 132 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 112 112 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 542 542 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ _ 19 introns intron NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 1211 1211 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 378 378 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 3 3 NUM CD NumType=Card _ _ _ _ 30 kb kb NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 36 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ' ' PUNCT `` _ _ _ _ _ 38 upstream upstream NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 eotaxin eotaxin NOUN NN Number=Sing _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 238 # text = Among the regulatory promoter elements potentially regulating eotaxin gene expression and/or mediating the effects of anti-inflammatory drugs we identified consensus sequences known to interact with nuclear factors like NF-IL6, AP-1, a NF-kappa-B like consensus sequence and gamma-interferon- as well as glucocorticoid response elements. 1 Among among ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 potentially potentially ADV RB _ _ _ _ _ 7 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 8 eotaxin eotaxin ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 or or CCONJ CC _ _ _ _ _ 14 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 drugs drug NOUN NNS Number=Plur _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 consensus consensus NOUN NN Number=Sing _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ _ 24 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 interact interact VERB VB VerbForm=Inf _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 like like ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 -B -b NOUN NN Number=Sing _ _ _ _ 44 like like ADP IN _ _ _ _ _ 45 consensus consensus NOUN NN Number=Sing _ _ _ _ 46 sequence sequence NOUN NN Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ _ 52 as as ADV RB _ _ _ _ _ 53 well well ADV RB Degree=Pos _ _ _ _ 54 as as ADP IN _ _ _ _ _ 55 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 56 response response NOUN NN Number=Sing _ _ _ _ 57 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 239 # text = Document 00300221 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300221 00300221 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 240 # text = Calcium-dependent immediate-early gene induction in lymphocytes is negatively regulated by p21Ha-ras. 1 Calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 negatively negatively ADV RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 p21Ha p21Ha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 241 # text = The induction of immediate-early (IE) response genes, such as egr-1, c-fos, and c-jun, occurs rapidly after the activation of T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IE ie NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 egr egr ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 c- c- PUNCT : _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 occurs occurs NOUN NNS Number=Plur _ _ _ _ 26 rapidly rapidly ADV RB _ _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 242 # text = The process of activation involves calcium mobilization, activation of protein kinase C (PKC), and phosphorylation of tyrosine kinases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 involves involf NOUN NNS Number=Plur _ _ _ _ 6 calcium calcium NOUN NN Number=Sing _ _ _ _ 7 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 243 # text = p21(ras), a guanine nucleotide binding factor, mediates T-cell signal transduction through PKC-dependent and PKC-independent pathways. 1 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 guanine guanine NOUN NN Number=Sing _ _ _ _ 8 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 mediates mediate NOUN NNS Number=Plur _ _ _ _ 13 T- T- PUNCT : _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 PKC Pkc ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 244 # text = The involvement of p21(ras) in the regulation of calcium-dependent signals has been suggested through analysis of its role in the activation of NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p21 p21 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 analysis analysis NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 245 # text = We have investigated the inductions of the IE genes in response to calcium signals in Jurkat cells (in the presence of activated p21(ras)) and their correlated consequences. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inductions induction NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IE ie ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 calcium calcium VERB VB VerbForm=Inf _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 32 consequences consequences NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 246 # text = The expression of activated p21(ras) negatively regulated the induction of IE genes by calcium ionophore. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 negatively negatively ADV RB _ _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IE ie ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 calcium calcium NOUN NN Number=Sing _ _ _ _ 18 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 247 # text = This inhibition of calcium-activated IE gene induction was reversed by treatment with cyclosporin A, suggesting the involvement of calcineurin in this regulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 calcium- calcium- PUNCT : _ _ _ _ SpaceAfter=No 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IE ie ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 involvement involvement NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 248 # text = A later result of inhibition of this activation pathway by p21(ras) was down-regulation of the activity of the transcription factor AP-1 and subsequent coordinate reductions in IL-2 gene expression and protein production. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 later later ADJ JJ Degree=Pos _ _ _ _ 3 result result NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 ras ras NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 31 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 32 reductions reduction NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 249 # text = These results suggest that p2l(ras) is an essential mediator in generating not only positive but also negative modulatory mechanisms controlling the competence of T cells in response to inductive stimulations. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 p2l( p2l( SYM NFP _ _ _ _ SpaceAfter=No 6 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 generating generate VERB VBG VerbForm=Ger _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 positive positive ADJ JJ Degree=Pos _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 modulatory modulatory ADJ JJ Degree=Pos _ _ _ _ 21 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 22 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 competence competence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 inductive inductive ADJ JJ Degree=Pos _ _ _ _ 32 stimulations stimulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 250 # text = Document 00300222 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300222 00300222 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 251 # text = The lymphotoxin promoter is stimulated by HTLV-I tax activation of NF-kappa B in human T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 tax tax NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 252 # text = The HTLV-I transcriptional activator tax was used to gain insight into the mechanism of lymphotoxin (LT; TNF-beta) gene induction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 tax tax NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 gain gain VERB VB VerbForm=Inf _ _ _ _ 12 insight insight NOUN NN Number=Sing _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 253 # text = Tax-expressing cell lines produce LT biologic activity. 1 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 expressing express VERB VBG VerbForm=Ger _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LT Lt ADJ JJ Degree=Pos _ _ _ _ 8 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 254 # text = An LT promoter (LT-293) CAT construct that contained an NF-kappa B site was active in the LT-producing C81-66-45 cell line, which contains defective HTLV-I but expresses tax. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 LT Lt ADJ JJS Degree=Sup _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 293 293 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 CAT cat NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LT- Lt- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 producing produce VERB VBG VerbForm=Ger _ _ _ _ 25 C81-66 C81-66 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -45 -45 NUM CD NumType=Card _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 defective defective ADJ JJ Degree=Pos _ _ _ _ 33 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 255 # text = The observation that a mutated LT-kappa B construct (M1-CAT) was inactive in C81-66-45, confirmed the importance of NF-kappa B in LT gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 M1 m1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 C81-66 C81-66 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 -45 -45 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 importance importance NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 LT LT PROPN NNP Number=Sing _ _ _ _ 32 gene gene PROPN NNP Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 256 # text = Tax was transfected into HTLV-I-negative human T-cell lines. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 into into ADP IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 257 # text = Jurkat 1 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ # sent_id = 258 # text = T cells stably expressing tax contained elevated levels of NF-kappa B that directly bound to the LT-kappa B site. 1 T t NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 expressing express VERB VBG VerbForm=Ger _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 directly directly ADV RB _ _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 259 # text = Tax co-transfected with reporter constructs into Jurkat cells maximally activated HTLV-I-LTR-CAT and kappa B-fos-CAT and also activated LT-293 to a lesser extent. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs constructs NOUN NNS Number=Plur _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 maximally maximally ADV RB _ _ _ _ _ 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -I -i PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 LTR- ltr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 CAT cat NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fos NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CAT Cat NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 293 293 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 32 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 260 # text = In JM 1 In in ADP IN _ _ _ _ _ 2 JM JM PROPN NNP Number=Sing _ _ _ _ # sent_id = 261 # text = T cells, tax induced LT-293 activity by two- to four-fold, though there was no induction of M1-CAT. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 tax tax NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 293 293 NUM CD NumType=Card _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 four four NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 though though SCONJ IN _ _ _ _ _ 19 there there PRON EX _ _ _ _ _ 20 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 M1 M1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 262 # text = The increase in LT-293 CAT activity mirrored the increase in LT biologic activity seen under these conditions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 293 293 NUM CD NumType=Card _ _ _ _ 7 CAT cat NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 mirrored mirror VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 LT LT PROPN NNP Number=Sing _ _ _ _ 14 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 263 # text = These studies, the first to demonstrate induction of LT promoter activity over basal levels, indicate that HTLV-I tax causes low-level activation of both endogenous LT and the LT promoter, at least in part through activation of NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LT Lt ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 over over ADP IN _ _ _ _ _ 14 basal basal ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 tax tax NOUN NN Number=Sing _ _ _ _ 23 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 level level NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 31 LT Lt NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 LT Lt ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 at at ADV RB _ _ _ _ _ 38 least least ADV RBS Degree=Sup _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 part part NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa PROPN NNP Number=Sing _ _ _ _ 47 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 264 # text = Document 00300223 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300223 00300223 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 265 # text = Inhibition of NF-kappa B activity in human T lymphocytes induces caspase-dependent apoptosis without detectable activation of caspase-1 and -3. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 17 without without ADP IN _ _ _ _ _ 18 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 266 # text = NF-kappa B is involved in the transcriptional control of various genes that act as extrinsic and intrinsic survival factors for T cells. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 extrinsic extrinsic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 20 survival survival NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 267 # text = Our findings show that suppression of NF-kappa B activity with cell-permeable SN50 peptide, which masks the nuclear localization sequence of NF-kappa B1 dimers and prevents their nuclear localization, induces apoptosis in resting normal human PBL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 suppression suppression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 16 SN50 SN50 NOUN NN Number=Sing _ _ _ _ 17 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 masks mask VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 localization localization NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B1 b1 PROPN NNP Number=Sing _ _ _ _ 30 dimers dimer NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 prevents prevent NOUN NNS Number=Plur _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 induces induce NOUN NNS Number=Plur _ _ _ _ 38 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 in in SCONJ IN _ _ _ _ _ 40 resting rest VERB VBG VerbForm=Ger _ _ _ _ 41 normal normal ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 268 # text = Inhibition of NF-kappa B resulted in the externalization of phosphatidylserine, induction of DNA breaks, and morphological changes consistent with apoptosis. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 externalization externalization NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 phosphatidylserine phosphatidylserine NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 breaks break NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 269 # text = DNA fragmentation was efficiently blocked by the caspase inhibitor Z-VAD-fmk and partially blocked by Ac-DEVD-fmk, suggesting that SN50-mediated apoptosis is caspase-dependent. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 efficiently efficiently ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 caspase caspase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 Z z NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 VAD Vad NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 fmk fmk NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 partially partially ADV RB _ _ _ _ _ 17 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 Ac- Ac- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 DEVD Devd NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fmk fmk NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 SN50 SN50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 270 # text = Interestingly, apoptosis induced by NF-kappa B suppression, in contrast to that induced by TPEN (N,N,N',N'-tetrakis [2-pyridylmethyl]ethylenediamine) or soluble Fas ligand (CD95), was observed in the absence of active death effector proteases caspase-1-like (IL-1 converting enzyme), caspase-3-like (CPP32/Yama/apopain), and caspase-6-like and without cleavage of caspase-3 substrates poly(ADP-ribose) polymerase and DNA fragmentation factor-45. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 contrast contrast NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TPEN TPEN PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 N,N,N' N,N,N' PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ SpaceAfter=No 22 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ' 's PART POS _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 tetrakis tetrakis NOUN NN Number=Sing _ _ _ _ 26 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 pyridylmethyl pyridylmethyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ethylenediamine ethylenediamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 35 Fas Fas PROPN NNP Number=Sing _ _ _ _ 36 ligand ligand NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 absence absence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 active active ADJ JJ Degree=Pos _ _ _ _ 48 death death NOUN NN Number=Sing _ _ _ _ 49 effector effector NOUN NN Number=Sing _ _ _ _ 50 proteases protease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 51 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 like like INTJ UH _ _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 converting converting NOUN NN Number=Sing _ _ _ _ 61 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 like like INTJ UH _ _ _ _ _ 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 CPP32/ CPP32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 Yama/ Yama/ PUNCT HYPH _ _ _ _ SpaceAfter=No 72 apopain apopain NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 -like -like ADJ JJ Degree=Pos _ _ _ _ 80 and and CCONJ CC _ _ _ _ _ 81 without without ADP IN _ _ _ _ _ 82 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 85 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 86 3 3 NUM CD NumType=Card _ _ _ _ 87 substrates substrate NOUN NNS Number=Plur _ _ _ _ 88 poly poly ADV RB _ _ _ _ SpaceAfter=No 89 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 90 ADP Adp NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 ribose ribose NOUN NN Number=Sing _ _ _ SpaceAfter=No 93 ) ) PUNCT -RRB- _ _ _ _ _ 94 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 95 and and CCONJ CC _ _ _ _ _ 96 DNA dna NOUN NN Number=Sing _ _ _ _ 97 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 98 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 99 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 100 45 45 NUM CD NumType=Card _ _ _ SpaceAfter=No 101 . . PUNCT . _ _ _ _ _ # sent_id = 271 # text = These findings suggest either low level of activation is required or that different caspases are involved. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 that that PRON WDT PronType=Dem _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 caspases caspase NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 272 # text = Preactivation of T cells resulting in NF-kappa B nuclear translocation protected cells from SN50-induced apoptosis. 1 Preactivation Preactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 resulting result VERB VBG VerbForm=Ger _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 translocation translocation NOUN NN Number=Sing _ _ _ _ 13 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 SN50 SN50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 273 # text = Our findings demonstrate an essential role of NF-kappa B in survival of naive PBL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 survival survival NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 naive naive ADJ JJ Degree=Pos _ _ _ _ 16 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 274 # text = Document 00300224 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300224 00300224 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 275 # text = Dysregulation of monocytic nuclear factor-kappa B by oxidized low-density lipoprotein. 1 Dysregulation Dysregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 oxidized oxidize ADJ JJ Degree=Pos _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 density density NOUN NN Number=Sing _ _ _ _ 14 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 276 # text = Nuclear factor-kappa B (NF-kappa B)/Rel transcription factors may be involved in atherosclerosis, as is suggested by the presence of activated NF-kappa B in human atherosclerotic lesions. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 37 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 277 # text = The aim of the present study was to investigate the effects of oxidized LDL (oxLDL) on the NF-kappa B system in human THP-1 monocytic cells as well as adherent monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 LDL LDL NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 oxLDL oxLDL INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 278 # text = Our results demonstrate that short-term incubation of these cells with oxLDL activated p50/p65 containing NF-kappa B dimers and induced the expression of the target gene IL-8. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 term term NOUN NN Number=Sing _ _ _ _ 8 incubation incubation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 p65 p65 NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 dimers dimer NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 target target NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 279 # text = This activation of NF-kappa B was inhibited by the antioxidant and H2O2 scavenger pyrrolidine dithiocarbamate and the proteasome inhibitor PSI. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 15 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 16 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 17 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 PSI pSi NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 280 # text = The oxLDL-induced NF-kappa B activation was accompanied by an initial depletion of I kappa B-alpha followed by a slight transient increase in the level of this inhibitor protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oxLDL oxldl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 initial initial ADJ JJ Degree=Pos _ _ _ _ 15 depletion depletion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha ADV RB _ _ _ _ _ 21 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 slight slight ADJ JJ Degree=Pos _ _ _ _ 25 transient transient NOUN NN Number=Sing _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 281 # text = In contrast, long-term treatment with oxLDL prevented the lipopolysaccharide-induced depletion of I kappa B-alpha, accompanied by an inhibition of both NF-kappa B activation and the expression of tumor necrosis factor-alpha and interleukin-1 beta genes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 term term NOUN NN Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 10 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 depletion depletion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 tumor tumor NOUN NN Number=Sing _ _ _ _ 38 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 alpha alpha NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 beta beta NOUN NN Number=Sing _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 282 # text = These observations provide additional evidence that oxLDL is a potent modulator of gene expression and suggest that (dys)regulation of NF-kappa B/Rel is likely to play an important role in atherogenesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 additional additional ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 potent potent NOUN NN Number=Sing _ _ _ _ 11 modulator modulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 dys dy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Rel Rel PROPN NNP Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 likely likely ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 play play VERB VB VerbForm=Inf _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 role role NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 283 # text = Document 00300225 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300225 00300225 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 284 # text = The interleukin-8 AP-1 and kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 8 8 NUM CD NumType=Card _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 285 # text = B-like sites are genetic end targets of FK506-sensitive pathway accompanied by calcium mobilization. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 7 end end NOUN NN Number=Sing _ _ _ _ 8 targets target NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 calcium calcium NOUN NN Number=Sing _ _ _ _ 17 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 286 # text = FK506, an immunosuppressant, inhibits the production of several cytokines in T lymphocytes. 1 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 287 # text = We observed that FK506 suppressed the transcription of a chemotactic cytokine, interleukin-8 (IL-8) in a human T cell line, Jurkat cells, activated by phorbol 12-myristate 13-acetate (PMA) and calcium (Ca2+) ionophore (ionomycin). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 5 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 34 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 myristate myristate NOUN NN Number=Sing _ _ _ _ 37 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 acetate acetate NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 calcium calcium NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 + + SYM SYM _ _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 288 # text = By deleted and mutated analysis of the IL-8 promoters, the AP-1 and kappa B-like sites were identified as the responsive elements for PMA and ionomycin. 1 By by ADP IN _ _ _ _ _ 2 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 like like SCONJ IN _ _ _ _ _ 22 sites site NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 PMA PMA PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 289 # text = FK506 suppressed the transcriptions through the AP-1 or kappa B-like sites induced by PMA plus Ca(2+)-mobilizing agents, but not those induced by Ca(2+)-independent stimuli. 1 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 2 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptions transcription NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 like like SCONJ IN _ _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ _ 19 plus plus CCONJ CC _ _ _ _ _ 20 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 +) +) SYM NFP _ _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 mobilizing mobilizing ADJ JJ Degree=Pos _ _ _ _ 26 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 Ca Ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 +) +) SYM NFP _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 independent independent ADJ JJ Degree=Pos _ _ _ _ 39 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 290 # text = In gel retardation analysis, FK506 had little effect on the binding to the AP-1 site of PMA/ionomycin-induced nuclear factors, which were recognized with anti-JunD or c-Fos antibody. 1 In in ADP IN _ _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 retardation retardation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 FK506 FK506 NUM CD NumType=Card _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 little little ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 PMA/ionomycin-induced PMA/ionomycin-induced ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 anti-JunD anti-jund NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Fos Fos ADJ JJ Degree=Pos _ _ _ _ 33 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 291 # text = In contrast, FK506 or EGTA (Ca2+ chelator) similarly affected the formation of kappa B-like site binding complexes, which were not recognized by any antibodies against the human Rel family proteins (c-Rel, p65, p50, and p49). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 FK506 FK506 NUM CD NumType=Card _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 EGTA EGTA PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 chelator chelator NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 similarly similarly ADV RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 any any DET DT _ _ _ _ _ 31 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 32 against against ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 Rel Rel NOUN NN Number=Sing _ _ _ _ 36 family family NOUN NN Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 292 # text = Furthermore, we confirmed the previous report that FK506 suppressed the PMA/ionomycin-induced activation through authentic kappa B site of immunoglobulin 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 confirmed confirm VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 report report NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 10 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 PMA/ionomycin-induced PMA/ionomycin-induced ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 authentic authentic ADJ JJ Degree=Pos _ _ _ _ 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 293 # text = (Ig) gene, to which NF-kappa B binding was also decreased by FK506, indicating that both IL-8 kappa B-like site and Ig kappa B site are FK506-sensitive in spite of the difference of binding factors. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 8 8 NUM CD NumType=Card _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Ig ig PROPN NNP Number=Sing _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 spite spite NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 difference difference NOUN NN Number=Sing _ _ _ _ 44 of of SCONJ IN _ _ _ _ _ 45 binding bind VERB VBG VerbForm=Ger _ _ _ _ 46 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 294 # text = Our results indicate that not only the reported IL-2 NF-AT and NFIL-2A sites and Ig kappa B site, but also the IL-8 AP-1 and kappa B-like sites are terminals of FK506-sensitive pathway involving Ca2+ mobilization. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT at NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NFIL Nfil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 A a NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Ig ig PROPN NNP Number=Sing _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 8 8 NUM CD NumType=Card _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 like like SCONJ IN _ _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ _ 42 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 43 terminals terminal NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 48 pathway pathway NOUN NN Number=Sing _ _ _ _ 49 involving involve VERB VBG VerbForm=Ger _ _ _ _ 50 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 + + SYM SYM _ _ _ _ _ 52 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 295 # text = Document 00300226 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300226 00300226 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 296 # text = Interactions of a transcriptional activator in the env gene of the mouse mammary tumor virus with activation-dependent, T cell-specific transacting factors. 1 Interactions Interaction NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 env env NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 transacting transacting NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 297 # text = The mouse mammary tumor virus env gene contains a transcriptional activator (META) that can control transcription of the adjacent long terminal repeat region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mouse mouse NOUN NN Number=Sing _ _ _ _ 3 mammary mammary NOUN NN Number=Sing _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 env env NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 control control VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 298 # text = Transcriptional control by META parallels that of several lymphokine genes, being specific to T cells, dependent on their activation, and inhibited by the immunosuppressive drug cyclosporine (CsA). 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 META META PROPN NNP Number=Sing _ _ _ _ 5 parallels parallel NOUN NNS Number=Plur _ _ _ _ 6 that that ADV WRB PronType=Rel _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 28 drug drug NOUN NN Number=Sing _ _ _ _ 29 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 299 # text = DNase I footprinting indicated that nuclear factors from activated T lymphocytes bound a promoter-proximal site, META(P), and a promoter-distal site, META(D+), within the 400-base pair META region. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 bound bound ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 distal distal ADJ JJ Degree=Pos _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 + + SYM SYM _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 within within ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 400 400 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 base base NOUN NN Number=Sing _ _ _ _ 42 pair pair NOUN NN Number=Sing _ _ _ _ 43 META Meof ADP IN Abbr=Yes _ _ _ _ 44 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 300 # text = Nuclear factors from unstimulated, but not from activated cells, bound a site, META(D-), adjacent to META(D+). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bound bound ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 +) +) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 301 # text = META(D+) directed transcription of a linked luciferase gene, and gel shift analysis revealed binding of inducible, CsA-sensitive T cell factors, in parallel with transfection results. 1 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 D would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ _ 18 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 26 T t NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 parallel parallel NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 transfection transfection NOUN NN Number=Sing _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 302 # text = Authentic NFAT and NF-kappaB targets did not compete for the META(D+) binding factor(s). 1 Authentic authentic PROPN NNP Number=Sing _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 targets target NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 compete compete VERB VB VerbForm=Inf _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 META METa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 D d NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 s s X AFX _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 303 # text = The SV40 core sequence competed for META(D+) binding factors, but META(D+) failed to compete for the complexes obtained with the SV40 probe. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 SV40 SV40 NUM CD NumType=Card _ _ _ _ 3 core core NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 competed compet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 compete compete VERB VB VerbForm=Inf _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ _ 27 obtained obtaine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 31 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 304 # text = Our results, taken together, indicate that META(D+) is a novel transcriptional enhancer element that is similar in its cell-type specificity, activation dependence, and CsA sensitivity to the NFAT element. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 together together ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 similar similar ADJ JJ Degree=Pos _ _ _ _ 23 in in SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 25 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type type NOUN NN Number=Sing _ _ _ _ 29 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 dependence dependence NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CsA csa DET DT Definite=Ind|PronType=Art _ _ _ _ 36 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 40 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 305 # text = It may be relevant to the role of MMTV in expression of Mls antigens or the induction of T cell lymphomas. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Mls Mls NOUN NNS Number=Plur _ _ _ _ 14 antigens antigen NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 306 # text = Document 00300227 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300227 00300227 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 307 # text = Cytomegalovirus immediate early genes upregulate interleukin-6 gene expression. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 upregulate upregulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 308 # text = BACKGROUND: The immediate early genes (IE) of human cytomegalovirus (CMV) can be expressed in monocytic cells and are known to regulate viral and cellular genes. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IE ie PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 309 # text = Interleukin-6 (IL-6) plays a central role in numerous inflammatory and immune processes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 310 # text = Interleukin-6 levels are increased in lung transplant patients clinically diagnosed with CMV pneumonitis. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 lung lung NOUN NN Number=Sing _ _ _ _ 9 transplant transplant NOUN NN Number=Sing _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 clinically clinically ADV RB _ _ _ _ _ 12 diagnosed diagnose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CMV Cmv PROPN NNP Number=Sing _ _ _ _ 15 pneumonitis pneumonitis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 311 # text = The regulation of IL-6 is dependent on various stimuli that include lipopolysaccharide (LPS), viruses, and other cytokines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 various various ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 312 # text = These studies examined the ability of CMV IE gene products to modulate IL-6 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CMV CMV PROPN NNP Number=Sing _ _ _ _ 8 IE ie PROPN NNP Number=Sing _ _ _ _ 9 gene gene ADJ JJ Degree=Pos _ _ _ _ 10 products product NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 313 # text = METHODS: THP-1 cells, a monocytic cell line, were transfected with the CMV IE genes. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CMV CMV PROPN NNP Number=Sing _ _ _ _ 18 IE ie PROPN NNP Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 314 # text = Interleukin-6 protein and IL-6 mRNA were measured in control and CMV immediate early transfected cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CMV Cmv X GW _ _ _ _ _ 16 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 17 early early ADV RB Degree=Pos _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 315 # text = Cotransfection of CMV IE genes and IL-6 chloramphenicol acetyl transferase (CAT) or IL-6 luciferase constructs were used to study IL-6 promoter activity. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CMV CMV PROPN NNP Number=Sing _ _ _ _ 4 IE ie PROPN NNP Number=Sing _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 12 transferase transferase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ _ 20 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 21 constructs construct NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 study study VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 316 # text = RESULTS: Interleukin-6 protein and mRNA production were significantly increased in cells transfected with the CMV IE genes and stimulated with LPS compared to LPS-stimulated control cells. 1 RESULTS result NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CMV CMV PROPN NNP Number=Sing _ _ _ _ 19 IE ie PROPN NNP Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 LPS Lp PROPN NNP Number=Sing _ _ _ _ 25 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 317 # text = Cytomegalovirus 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ # sent_id = 318 # text = IE gene products significantly enhanced LPS stimulation of IL-6 promoter activity in both IL-6 CAT and IL-6 luciferase assays. 1 IE ie ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 products product NOUN NNS Number=Plur _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 CAT cat NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ _ 24 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 319 # text = A deletion construct that contains a NF-kappa B site but is missing the multiple response region demonstrated a continued increase in IL-6 luciferase activity in LPS-stimulated CMV transfected cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 construct construct NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 missing miss VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 continued continu VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 CMV haCmve NOUN NN Number=Sing _ _ _ _ 34 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 320 # text = CONCLUSION: Cytomegalovirus immediate early gene products significantly enhanced expression of IL-6 in LPS-stimulated cells. 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 321 # text = The increase in IL-6 luciferase activity occurs in the absence of the multiple response region, the area of the IL-6 promoter responsive to IL-1, TNF alpha, cyclic amp, and phorbol 12-myristate 13-acetate. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 absence absence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 area area NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 6 6 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 TNF TNF PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 37 amp amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 41 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT : _ _ _ _ SpaceAfter=No 43 myristate myristate NOUN NN Number=Sing _ _ _ _ 44 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 322 # text = The ability of CMV IE gene products to enhance IL-6 production may play an important role in immune inflammatory states associated with CMV infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CMV CMV PROPN NNP Number=Sing _ _ _ _ 5 IE ie PROPN NNP Number=Sing _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 states state NOUN NNS Number=Plur _ _ _ _ 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 CMV Cmv NOUN NN Number=Sing _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 323 # text = Document 00300228 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300228 00300228 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 324 # text = Costimulation requirement for AP-1 and NF-kappa B transcription factor activation in T cells. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 325 # text = The transcriptional activity of the IL-2 promoter requires T-cell costimulation delivered by the TCR and the auxiliary receptor CD28. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 requires require NOUN NNS Number=Plur _ _ _ _ 11 T- T- PUNCT : _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 14 delivered deliver VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 auxiliary auxiliary ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 326 # text = Several transcription factors participate in IL-2 promoter activation, among which are AP-1-like factors and NF-kappa B. Protein phosphorylation has an important role in the regulation of these two factors: (1) it induces the transactivating capacity of the AP-1 protein c-Jun; and (2) it is involved in the release of the cytoplasmic inhibitor, I kappa B, from NF-kappa B, allowing translocation of the latter into the nucleus. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 among among ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADP IN _ _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ 27 Protein protein NOUN NN Number=Sing _ _ _ _ 28 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 29 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 38 two two NUM CD NumType=Card _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 : : PUNCT : _ _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 45 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 48 capacity capacity NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 protein protein NOUN NN Number=Sing _ _ _ _ 55 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 ; ; PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 2 2 X LS _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 64 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 65 involved involved ADJ JJ Degree=Pos _ _ _ _ 66 in in ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 release release NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 72 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 , , PUNCT , _ _ _ _ _ 74 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 75 kappa kappa PROPN NNP Number=Sing _ _ _ _ 76 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 , , PUNCT , _ _ _ _ _ 78 from from ADP IN _ _ _ _ _ 79 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 80 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 81 kappa kappa NOUN NN Number=Sing _ _ _ _ 82 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 , , PUNCT , _ _ _ _ _ 84 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 85 translocation translocation NOUN NN Number=Sing _ _ _ _ 86 of of ADP IN _ _ _ _ _ 87 the the DET DT Definite=Def|PronType=Art _ _ _ _ 88 latter latter ADJ JJ Degree=Pos _ _ _ _ 89 into into ADP IN _ _ _ _ _ 90 the the DET DT Definite=Def|PronType=Art _ _ _ _ 91 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 92 . . PUNCT . _ _ _ _ _ # sent_id = 327 # text = We have recently shown that both phosphorylation processes require T-cell costimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 processes process NOUN NNS Number=Plur _ _ _ _ 9 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 328 # text = Furthermore, in activated T cells, the kinetics of the two phosphorylation events are essentially similar. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essentially essentially ADV RB _ _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 329 # text = According to our results, however, the kinases responsible for the two processes are distinct entities. 1 According accord VERB VBG VerbForm=Ger _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 however however ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kinases kinase NOUN NNS Number=Plur _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 processes process NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 entities entity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 330 # text = Whereas TPCK inhibits phosphorylation of I kappa B and, consequently, activation of NF-kappa B, it markedly enhances the activity of JNK, the MAP kinase-related kinase that phosphorylates the transactivation domain of c-Jun. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 TPCK TPCK PROPN NNP Number=Sing _ _ _ _ 3 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 consequently consequently ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 markedly markedly ADV RB _ _ _ _ _ 22 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 MAP map PROPN NNP Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 related related ADJ JJ Degree=Pos _ _ _ _ 33 kinase kinase NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 phosphorylates phosphorylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 38 domain domain NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 331 # text = We, therefore, propose the activation scheme presented in FIGURE 3 for T-cell costimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 propose propose VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 scheme scheme NOUN NN Number=Sing _ _ _ _ 9 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 FIGURE figure PROPN NNP Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 332 # text = Costimulation results in the activation of a signaling pathway that leads to the simultaneous induction of the two transcription factors, AP-1 and NF-kappa B. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 signaling signal NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 333 # text = Integration of the signals generated by TCR and CD28 engagement occurs along this pathway, which then bifurcates to induce I kappa B phosphorylation and NF-kappa B activation on the one hand, and JNK activation and c-Jun phosphorylation on the other. 1 Integration Integration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TCR TCR PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 occurs occur NOUN NNS Number=Plur _ _ _ _ 12 along along ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 then then ADV RB PronType=Dem _ _ _ _ 18 bifurcates bifurcate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa X FW Foreign=Yes _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 JNK JNK PROPN NNP Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 Jun Jun PROPN NNP Number=Sing _ _ _ _ 43 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 44 on on ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 334 # text = We are currently engaged in defining where the two signals integrate along the AP-1/NF-kappa B pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 currently currently ADV RB _ _ _ _ _ 4 engaged engage VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 defining define VERB VBG VerbForm=Ger _ _ _ _ 7 where where ADV WRB PronType=Int _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 integrate integrate ADJ JJ Degree=Pos _ _ _ _ 12 along along ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 335 # text = Document 00300229 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300229 00300229 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 336 # text = The Epstein-Barr virus oncogene product latent membrane protein 1 engages the tumor necrosis factor receptor-associated death domain protein to mediate B lymphocyte growth transformation and activate NF-kappaB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 engages engage VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 transformation transformation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 activate activate VERB VB VerbForm=Inf _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 337 # text = The Epstein-Barr virus latent membrane protein 1 (LMP1) is essential for the transformation of B lymphocytes into lymphoblastoid cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 latent latent ADJ JJ Degree=Pos _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transformation transformation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 338 # text = Previous data are consistent with a model that LMP1 is a constitutively activated receptor that transduces signals for transformation through its carboxyl-terminal cytoplasmic tail. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 constitutively constitutively ADV RB _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 transduces transduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 25 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 339 # text = One transformation effector site (TES1), located within the membrane proximal 45 residues of the cytoplasmic tail, constitutively engages tumor necrosis factor receptor-associated factors. 1 One one NUM CD NumType=Card _ _ _ _ 2 transformation transformation NOUN NN Number=Sing _ _ _ _ 3 effector effector NOUN NN Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TES1 TES1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 membrane membrane NOUN NN Number=Sing _ _ _ _ 13 proximal proximal NOUN NN Number=Sing _ _ _ _ 14 45 45 NUM CD NumType=Card _ _ _ _ 15 residues residue NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 constitutively constitutively ADV RB _ _ _ _ _ 22 engages engage NOUN NNS Number=Plur _ _ _ _ 23 tumor tumor ADP IN _ _ _ _ _ 24 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 340 # text = Signals from TES1 are sufficient to drive initial proliferation of infected resting B lymphocytes, but most lymphoblastoid cells infected with a virus that does not express the 155 residues beyond TES1 fail to grow as long-term cell lines. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 TES1 tES1 NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 drive drive VERB VB VerbForm=Inf _ _ _ _ 8 initial initial ADJ JJ Degree=Pos _ _ _ _ 9 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 resting reste VERB VBG VerbForm=Ger _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 express express VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 155 155 NUM CD NumType=Card _ _ _ _ 30 residues residue NOUN NNS Number=Plur _ _ _ _ 31 beyond beyond ADP IN _ _ _ _ _ 32 TES1 TES1 NUM CD NumType=Card _ _ _ _ 33 fail fail NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 grow grow VERB VB VerbForm=Inf _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 term term NOUN NN Number=Sing _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 341 # text = We now find that mutating two tyrosines to an isoleucine at the carboxyl end of the cytoplasmic tail cripples the ability of EBV to cause lymphoblastoid cell outgrowth, thereby marking a second transformation effector site, TES2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mutating mutat VERB VBG VerbForm=Ger _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 isoleucine isoleucine NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 carboxyl carboxyl NOUN NN Number=Sing _ _ _ _ 14 end end NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 18 tail tail NOUN NN Number=Sing _ _ _ _ 19 cripples cripple NOUN NNS Number=Plur _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 EBV EBV PROPN NNP Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 cause cause VERB VB VerbForm=Inf _ _ _ _ 26 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 outgrowth outgrowth ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 thereby thereby ADV RB _ _ _ _ _ 31 marking mark VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 34 transformation transformation NOUN NN Number=Sing _ _ _ _ 35 effector effector NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 TES2 TES2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 342 # text = A yeast two-hybrid screen identified TES2 interacting proteins, including the tumor necrosis factor receptor-associated death domain protein (TRADD). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 6 screen screen NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 TES2 TES2 NUM CD NumType=Card _ _ _ _ 9 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TRADD TRADD NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 343 # text = TRADD was the only protein that interacted with wild-type TES2 and not with isoleucine-mutated TES2. 1 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 only only ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 type type NOUN NN Number=Sing _ _ _ _ 12 TES2 Tes2 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 isoleucine isoleucine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 TES2 Tes2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 344 # text = TRADD associated with wild-type LMP1 but not with isoleucine-mutated LMP1 in mammalian cells, and TRADD constitutively associated with LMP1 in EBV-transformed cells. 1 TRADD Tradd NOUN NN Number=Sing _ _ _ _ 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 isoleucine-mutated isoleucine-mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 TRADD TRADD PROPN NNP Number=Sing _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 345 # text = In transfection assays, TRADD and TES2 synergistically mediated high-level NF-kappaB activation. 1 In in ADP IN _ _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 TRADD Tradd PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TES2 TES2 NUM CD NumType=Card _ _ _ _ 8 synergistically synergistically ADV RB _ _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 level level NOUN NN Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 346 # text = These results indicate that LMP1 appropriates TRADD to enable efficient long-term lymphoblastoid cell outgrowth. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 6 appropriates appropriate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 TRADD TRADD PROPN NNP Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enable enable VERB VB VerbForm=Inf _ _ _ _ 10 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 11 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 term term NOUN NN Number=Sing _ _ _ _ 14 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 outgrowth outgrowth NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 347 # text = High-level NF-kappaB activation also appears to be a critical component of long-term outgrowth. 1 High high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 level level NOUN NN Number=Sing _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 component component NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 term term NOUN NN Number=Sing _ _ _ _ 19 outgrowth outgrowth NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 348 # text = Document 00300230 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300230 00300230 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 349 # text = ETS transcription factors regulate an enhancer activity in the third intron of TNF-alpha. 1 ETS ets NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 intron intron NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 350 # text = We describe an enhancer site in the third intron of tumor necrosis factor alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 intron intron NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 351 # text = A reporter construct containing the 5'-flanking region of the mouse TNF-alpha gene displayed weak activity when transfected into RAW264.7 macrophage-like cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 reporter reporter NOUN NN Number=Sing _ _ _ _ 3 construct construct NOUN NN Number=Sing _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mouse mouse NOUN NN Number=Sing _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 weak weak ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 when when ADV WRB PronType=Int _ _ _ _ 22 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 into into ADP IN _ _ _ _ _ 24 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 264.7 264.7 NUM CD NumType=Card _ _ _ _ 26 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 352 # text = The addition of the third intron of TNF-alpha to this construct resulted in an enhancement of CAT protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 intron intron NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 construct construct NOUN NN Number=Sing _ _ _ _ 14 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CAT Cat NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 353 # text = This enhancement was eliminated if a conserved 20-bp sequence was removed from the intron or if a dominant-negative ets-binding factor was co-transfected with the reporter gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 if if SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 bp bp NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 removed remove VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 if if SCONJ IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 negative negative ADJ JJ Degree=Pos _ _ _ _ 23 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 reporter reporter NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 354 # text = Mutations of this site that destroyed potential ets transcription factor binding sites had reduced transcriptional activity. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 destroyed destroy VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 potential potential ADJ JJ Degree=Pos _ _ _ _ 8 ets et NOUN NNS Number=Plur _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 355 # text = The major transcription factor that bound to the oligonucleotide was confirmed to be GABP by supershift and competition analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 GABP GABP PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 supershift supershift NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 competition competition NOUN NN Number=Sing _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 356 # text = In RAW264.7 cells, the binding was constitutive, however, in bone marrow-derived macrophages binding activity was shown to be interferon-gamma inducible. 1 In in ADP IN _ _ _ _ _ 2 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 264.7 264.7 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 bone bone ADJ JJ Degree=Pos _ _ _ _ 15 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 interferon interferon ADP IN _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma NOUN NN Number=Sing _ _ _ _ 28 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 357 # text = This may imply a role for ets transcription factors in the production of TNF-alpha. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 imply imply VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 ets et NOUN NNS Number=Plur _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 358 # text = Document 00300231 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300231 00300231 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 359 # text = Xenogeneic human serum promotes leukocyte adhesion to porcine endothelium under flow conditions, possibly through the activation of the transcription factor NF-kappa B. 1 Xenogeneic Xenogeneic ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 serum serum NOUN NN Number=Sing _ _ _ _ 4 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 porcine porcine VERB VB VerbForm=Inf _ _ _ _ 9 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 10 under under ADP IN _ _ _ _ _ 11 flow flow NOUN NN Number=Sing _ _ _ _ 12 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 possibly possibly ADV RB _ _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 360 # text = Endothelial cell activation and leukocyte infiltration are a consistent feature of discordant xenograft rejection. 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 6 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 10 feature feature NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 discordant discordant ADJ JJ Degree=Pos _ _ _ _ 13 xenograft xenograft NOUN NN Number=Sing _ _ _ _ 14 rejection rejection NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 361 # text = Here we evaluated whether xenogeneic serum, as a source of xenoreactive natural antibodies and complement, induced endothelial cell activation with consequent leukocyte adhesion under flow conditions. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 6 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 source source NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 xenoreactive xenoreactive ADJ JJ Degree=Pos _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 complement complement NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 24 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 flow flow ADJ JJ Degree=Pos _ _ _ _ 28 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 362 # text = Porcine aortic endothelial cells (PAEC) were incubated for 1 hr 30 min or 5 hr with 10% homologous porcine serum (control) or 10% xenogeneic human serum and then perfused with total human leukocytes in a parallel plate flow chamber under laminar flow (1.5 dynes/cm2). 1 Porcine Porcine PROPN NNP Number=Sing _ _ _ _ 2 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PAEC PAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 hr hr NOUN NN Number=Sing _ _ _ _ 13 30 30 NUM CD NumType=Card _ _ _ _ 14 min min NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ _ 17 hr hr NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 % % SYM NN Number=Sing _ _ _ _ 21 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 22 porcine porcine NOUN NN Number=Sing _ _ _ _ 23 serum serum NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 % % SYM NN Number=Sing _ _ _ _ 30 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 serum serum NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 then then ADV RB PronType=Dem _ _ _ _ 35 perfused perfuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 total total ADJ JJ Degree=Pos _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 43 plate plate NOUN NN Number=Sing _ _ _ _ 44 flow flow NOUN NN Number=Sing _ _ _ _ 45 chamber chamber NOUN NN Number=Sing _ _ _ _ 46 under under ADP IN _ _ _ _ _ 47 laminar laminar ADJ JJ Degree=Pos _ _ _ _ 48 flow flow NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 1.5 1.5 NUM CD NumType=Card _ _ _ _ 51 dynes dyne NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 / / SYM SYM _ _ _ _ SpaceAfter=No 53 cm2 cm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 363 # text = Adherent cells were counted by digital image analysis. 1 Adherent adherent ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 counted count VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 digital digital ADJ JJ Degree=Pos _ _ _ _ 7 image image NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 364 # text = Xenogeneic human serum significantly (P < 0.01) increased the number of adherent leukocytes as compared with porcine serum. 1 Xenogeneic Xenogeneic ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 serum serum NOUN NN Number=Sing _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p NOUN NN Number=Sing _ _ _ _ 7 < < PUNCT -LRB- _ _ _ _ _ 8 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 porcine porcine NOUN NN Number=Sing _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 365 # text = A similar adhesive response was elicited by TNF alpha (100 U/ml), one of the most potent inducers of endothelial cell adhesive properties, here used as positive control. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 elicited elicit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 100 100 NUM CD NumType=Card _ _ _ _ 12 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 potent potent ADJ JJ Degree=Pos _ _ _ _ 21 inducers inducer NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 26 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 here here ADV RB PronType=Dem _ _ _ _ 29 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 366 # text = In order to elucidate possible mechanisms underlying endothelial cell activation by xenogeneic serum, we focussed on transcription factor NF-kappa B, a central regulator for the induction of different genes, including adhesive molecules and chemoattractants. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 focussed focuss VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 central central ADJ JJ Degree=Pos _ _ _ _ 27 regulator regulator NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 including include VERB VBG VerbForm=Ger _ _ _ _ 36 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 chemoattractants chemoattractant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 367 # text = By confocal fluorescence microscopy, we observed a positive staining for NF-kappa B (p65 subunit) in the nuclei of PAEC exposed for 1 hr 30 min to human serum, which indicated NF-kappa B activation in this setting. 1 By by ADP IN _ _ _ _ _ 2 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 3 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 4 microscopy microscopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 staining staining NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p65 p65 NUM CD NumType=Card _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 25 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 hr hr NOUN NN Number=Sing _ _ _ _ 29 30 30 NUM CD NumType=Card _ _ _ _ 30 min min NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 setting setting NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 368 # text = At variance, in PAEC incubated with the homologous serum, NF-kappa B was strictly localized in the cell cytoplasm. 1 At at ADP IN _ _ _ _ _ 2 variance variance NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 6 incubated incubate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 10 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 strictly strictly ADV RB _ _ _ _ _ 18 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 369 # text = Treatment of PAEC exposed to xenogeneic serum with the NF-kappa B inhibitors pyrrolidinedithiocarbamate (PDTC, 25 microM) and tosyl-phechloromethylketone (TPCK, 25 microM) significantly (P < 0.01) reduced leukocyte adhesion in respect to PAEC treated with human serum alone. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 4 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 7 serum serum NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 15 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 25 25 NUM CD NumType=Card _ _ _ _ 20 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 tosyl tosyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 phechloromethylketone phechloromethylketone NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TPCK TPCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 25 25 NUM CD NumType=Card _ _ _ _ 30 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 significantly significantly ADV RB _ _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 P p NOUN NN Number=Sing _ _ _ _ 35 < < PUNCT -LRB- _ _ _ _ _ 36 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 respect respect NOUN NN Number=Sing _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 45 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 serum serum NOUN NN Number=Sing _ _ _ _ 49 alone alone ADV RB _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 370 # text = Findings that xenogeneic serum promotes leukocyte-endothelium interaction possibly through NF-kappa B activation might be relevant for designing future therapeutic strategies aimed at prolonging xenograft survival. 1 Findings finding NOUN NNS Number=Plur _ _ _ _ 2 that that SCONJ IN _ _ _ _ _ 3 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 4 serum serum NOUN NN Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 possibly possibly ADV RB _ _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 designing design VERB VBG VerbForm=Ger _ _ _ _ 22 future future ADJ JJ Degree=Pos _ _ _ _ 23 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 24 strategies strategy NOUN NNS Number=Plur _ _ _ _ 25 aimed aim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 at at SCONJ IN _ _ _ _ _ 27 prolonging prolonge VERB VBG VerbForm=Ger _ _ _ _ 28 xenograft xenograft NOUN NN Number=Sing _ _ _ _ 29 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 371 # text = Document 00300232 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300232 00300232 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 372 # text = Epstein-Barr virus replicative gene transcription during de novo infection of human thymocytes: simultaneous early expression of BZLF-1 and its repressor RAZ. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 de de PROPN NNP Number=Sing _ _ _ _ 10 novo novo PROPN NNP Number=Sing _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 BZLF BZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 repressor repressor NOUN NN Number=Sing _ _ _ _ 26 RAZ Raz PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 373 # text = Epstein-Barr virus (EBV) is known to infect B cells and epithelial cells. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 infect infect VERB VB VerbForm=Inf _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 374 # text = We and others have shown that EBV can also infect a subset of thymocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 others other NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 infect infect VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 subset subset NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 375 # text = Infection of thymocytes was accompanied by the appearance of linear EBV genome within 8 hr of infection. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 linear linear NOUN NN Number=Sing _ _ _ _ 11 EBV EBV NOUN NN Number=Sing _ _ _ _ 12 genome genome NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 8 8 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 376 # text = Circularization of the EBV genome was not detected. 1 Circularization Circularization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 EBV EBV PROPN NNP Number=Sing _ _ _ _ 5 genome genome NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 377 # text = This is in contrast to the infection in B cells where the genome can circularize within 24 hr of infection. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 where where ADV WRB PronType=Rel _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 genome genome NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 circularize circularize VERB VB VerbForm=Inf _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 24 24 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 378 # text = The appearance of the BamHI ZLF-1 gene product, ZEBRA, by RT-PCR, was observed within 8 hr of infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 BamHI BamHI PROPN NNP Number=Sing _ _ _ _ 6 ZLF ZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 8 8 NUM CD NumType=Card _ _ _ _ 23 hr hr NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 379 # text = The appearance of a novel fusion transcript (RAZ), which comprised regions of the BZLF-1 locus and the adjacent BRLF-1 locus, was detected by RT-PCR. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RAZ RAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 comprised comprise VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 regions region NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 BZLF BZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 locus locus NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 24 BRLF BRLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 380 # text = ZEBRA protein was also identified in infected thymocytes by immunoprecipitation. 1 ZEBRA zebra NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 381 # text = In addition, we demonstrated that the EBNA-1 gene in infected thymocytes was transcribed from the Fp promoter, rather than from the Cp/Wp promoter which is used in latently infected B cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 infected infected ADJ JJ Degree=Pos _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Fp Fp PROPN NNP Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 rather rather ADV RB _ _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Cp/ cp/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 Wp Wp NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 latently latently ADV RB _ _ _ _ _ 34 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 382 # text = Transcripts encoding gp350/220, the major coat protein of EBV, were identified, but we did not find any evidence of transcription from the LMP-2A or EBER-1 loci in infected thymocytes. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 3 gp350 gp350 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 / / SYM SYM _ _ _ _ SpaceAfter=No 5 220 220 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 coat coat NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 find find VERB VB VerbForm=Inf _ _ _ _ 22 any any DET DT _ _ _ _ _ 23 evidence evidence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2A 2A PROPN NNP Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 EBER EBER PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 loci loci NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 infected infect ADJ JJ Degree=Pos _ _ _ _ 38 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 383 # text = These observations suggest that de novo EBV infection of thymocytes differs from infection of B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 de de PROPN NNP Number=Sing _ _ _ _ 6 novo novo PROPN NNP Number=Sing _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 differs differ NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 384 # text = The main difference is that with thymocytes, no evidence could be found that the virus ever circularizes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 main main ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 evidence evidence NOUN NN Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ever ever ADV RB _ _ _ _ _ 18 circularizes circularize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 385 # text = Rather, EBV remains in a linear configuration from which replicative genes are transcribed. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ _ 4 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 linear linear NOUN NN Number=Sing _ _ _ _ 8 configuration configuration NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 386 # text = Document 00300233 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300233 00300233 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 387 # text = Second messenger up-regulation of androgen receptor gene transcription is absent in androgen insensitive human prostatic carcinoma cell lines, PC-3 and DU-145. 1 Second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 2 messenger messenger NOUN NN Number=Sing _ _ _ _ 3 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 androgen androgen NUM CD NumType=Card _ _ _ _ 15 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 prostatic prostatic ADJ JJ Degree=Pos _ _ _ _ 18 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 DU du NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 145 145 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 388 # text = A theoretical pathway of transcriptional regulation of the androgen receptor (AR) gene is via a cAMP response element (CRE) present in its promoter region (-508 to -501). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 theoretical theoretical ADJ JJ Degree=Pos _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 AR be NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 region region NOUN NN Number=Sing _ _ _ _ 29 (- (- PUNCT . _ _ _ _ SpaceAfter=No 30 508 508 NUM CD NumType=Card _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 501 501 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 389 # text = After 20 h of stimulation with 8-bromo-cAMP, AR mRNA was upregulated in LNCaP but not in either PC-3 or DU-145 cell lines. 1 After after ADP IN _ _ _ _ _ 2 20 20 NUM CD NumType=Card _ _ _ _ 3 h h NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 bromo-cAMP bromo-camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AR ar PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 LNCaP LNCaP NOUN NN Number=Sing _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 either either DET DT _ _ _ _ _ 21 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 DU do NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 145 145 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 390 # text = We have demonstrated that the level of CRE binding protein (CREB) was the same in all cell lines and that the putative AR-CRE forms specific and compatible protein interactions with CREB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CRE Cre PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 all all DET DT _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 putative putative ADJ JJ Degree=Pos _ _ _ _ 25 AR ar NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CRE Cre NOUN NN Number=Sing _ _ _ _ 28 forms form NOUN NNS Number=Plur _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 interactions interaction NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 391 # text = The ability to regulate AR gene transcription via the second messenger pathway is lost in the PC-3 and DU-145 cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 5 AR be ADP IN _ _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 messenger messenger NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 DU do NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 145 145 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 392 # text = This may be an important primary mechanism of androgen insensitivity in prostate cancer. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 primary primary ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 10 insensitivity insensitivity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 prostate prostate ADJ JJ Degree=Pos _ _ _ _ 13 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 393 # text = Document 00300234 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300234 00300234 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 394 # text = Induction of tyrosine phosphorylation and T-cell activation by vanadate peroxide, an inhibitor of protein tyrosine phosphatases. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 vanadate vanadate ADJ JJ Degree=Pos _ _ _ _ 11 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 395 # text = Rapid tyrosine phosphorylation of key cellular proteins is a crucial event in the transduction of activation signals to T-lymphocytes. 1 Rapid rapid ADJ JJ Degree=Pos _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 key key ADJ JJ Degree=Pos _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 11 event event NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 396 # text = The regulatory role of protein tyrosine phosphatases (PTPases) in this process was explored by studying the effects of a powerful PTPase inhibitor, vanadate peroxide (pervanadate), on the activation cascade of Jurkat human leukaemic T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PTPases PTPase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 process process NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 studying study VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effects effect NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 23 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 24 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 27 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 pervanadate pervanadate NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 cascade cascade NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 leukaemic leukaemic ADJ JJ Degree=Pos _ _ _ _ 40 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 397 # text = Pervanadate induced activation of the tyrosine kinases lck and fyn (4- and 3-fold respectively) and a dramatic increase in tyrosine phosphorylation of cellular proteins, notably phospholipase C gamma 1. 1 Pervanadate Pervanadate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 lck lck NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 fyn fyn NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 notably notably ADV RB _ _ _ _ _ 32 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ _ 34 gamma gamma NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 398 # text = After this event, we observed a rise in intracellular Ca2+ concentration, corresponding to an influx. 1 After after ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rise rise NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 11 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 influx influx NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 399 # text = This effect required surface expression of the CD45 PTPase and was not observed in CD45-deficient variants of Jurkat cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 9 PTPase PTPase PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 18 variants variant NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 400 # text = In the CD45-negative variant, the effect of pervanadate on tyrosine phosphorylation was globally decreased and some phosphorylated substrates were specifically missing. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 CD45 Cd45 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 variant variant NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 pervanadate pervanadate NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 globally globally ADV RB _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 substrates substrate NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 missing missing VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 401 # text = Pervanadate also stimulated transcription of the c-fos gene and accumulation of its mRNA as well as several other hallmarks of T-lymphocyte activation such as surface expression of the CD69 antigen and the interleukin 2 receptor alpha-chain (CD25). 1 Pervanadate Pervanadate PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 hallmarks hallmark NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 surface surface NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 CD69 CD69 PROPN NNP Number=Sing _ _ _ _ 33 antigen antigen NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 CD25 CD25 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 402 # text = Pervanadate synergized with signals delivered by T-cell antigen receptor engagement or by a phorbol ester to induce interleukin 2 production. 1 Pervanadate Pervanadate NOUN NN Number=Sing _ _ _ _ 2 synergized synergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 delivered deliver VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 engagement engagement NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 16 ester ester NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 interleukin interleukin ADV RB _ _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 403 # text = Pervanadate activated NF-kappa B, as shown by an increase in DNA-binding activity of this transcription factor. 1 Pervanadate Pervanadate PROPN NNP Number=Sing _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 as as SCONJ IN _ _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 404 # text = We thus conclude that PTPases play a crucial role in the negative regulation of signal transduction culminating in T-lymphocyte activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 thus thus ADV RB _ _ _ _ _ 3 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PTPases PTPase PROPN NNPS Number=Plur _ _ _ _ 6 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 culminating culminat VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 405 # text = Moreover, induction of tyrosine phosphorylation appears sufficient per se to initiate a complete activation programme. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 9 per per ADP IN _ _ _ _ _ 10 se se NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 complete complete ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 programme programme NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 406 # text = Document 00300235 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300235 00300235 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 407 # text = Relationship between IkappaBalpha constitutive expression, TNFalpha synthesis, and apoptosis in EBV-infected lymphoblastoid cells. 1 Relationship relationship NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 408 # text = In order to understand the role of NF-kappaB in EBV transformation we have established stably transfected IkappaBalpha into lymphoblastoid cells. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 understand understand VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ _ 13 transformation transformation NOUN NN Number=Sing _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 stably stably ADV RB _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 20 into into ADP IN _ _ _ _ _ 21 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 409 # text = Two clones were obtained in which the loss of NF-kappaB binding activity correlated with the constitutive expression of the transgenic IkappaBalpha. 1 Two two NUM CD NumType=Card _ _ _ _ 2 clones clone NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 loss loss NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 23 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 410 # text = Protein latency expression was determined by immunocytochemistry. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 latency latency NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 411 # text = Expression of surface markers, intracytoplasmic content of cytokines cell cycle analysis after BrdU incorporation and DNA staining with propidium iodide were studied by flow cytometry. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 surface surface NOUN NN Number=Sing _ _ _ _ 4 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 content content NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 cycle cycle NOUN NN Number=Sing _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 BrdU Brdu PROPN NNP Number=Sing _ _ _ _ 15 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 staining stain VERB VBG VerbForm=Ger _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 propidium propidium NOUN NN Number=Sing _ _ _ _ 21 iodide iodide NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 flow flow NOUN NN Number=Sing _ _ _ _ 26 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 412 # text = Percentage of apoptotic cells was determined by in-situ labelling of DNA strand breaks. 1 Percentage percentage NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 situ situ NOUN NN Number=Sing _ _ _ _ 11 labelling labelling NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 strand strand NOUN NN Number=Sing _ _ _ _ 15 breaks break NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 413 # text = No significative changes in EBV latency nor in cell surface marker expression was found. 1 No no DET DT _ _ _ _ _ 2 significative significative ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 latency latency PROPN NNP Number=Sing _ _ _ _ 7 nor nor CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 marker marker NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 414 # text = In contrast, intracytoplasmic TNFalpha levels were strongly reduced in transfected clones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 5 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 strongly strongly ADV RB _ _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 415 # text = Furthermore, 30% of IkappaBalpha transfected cells were apoptotic after 8 h of TNFalpha treatment. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 % % SYM NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 8 8 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 416 # text = This correlated with a strong reduction of BrdU incorporation after 24 h of TNFalpha treatment. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 reduction reduction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 BrdU BrdU PROPN NNP Number=Sing _ _ _ _ 9 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 24 24 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 417 # text = No effect was seen with non transfected cells or with cells transfected with a control plasmid. 1 No no DET DT _ _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 non non X AFX _ _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 418 # text = Our results suggest that the TNFalpha gene could be one of the targets of NF-kappaB in EBV infected cells and that NF-kappaB protects EBV-infected cells from apoptosis induced by TNFalpha, which may favour the proliferative effect of this cytokine. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TNFalpha TNFalpha NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 one one NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 targets target NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 EBV EBV PROPN NNP Number=Sing _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 protects protects NOUN NNS Number=Plur _ _ _ _ 28 EBV haEbve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 favour favour VERB VB VerbForm=Inf _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 43 effect effect NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 46 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 419 # text = Document 00300236 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300236 00300236 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 420 # text = High molecular weight dextran sulfate increases the activity of NF-kappaB-regulated promoter in monocyte-derived macrophages. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 weight weight NOUN NN Number=Sing _ _ _ _ 4 dextran dextrun NOUN NN Number=Sing _ _ _ _ 5 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 6 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 421 # text = It is known that sulfated polysaccharides can mimic the action of common T-cell mitogens. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 sulfated sulfate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 polysaccharides polysaccharide NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 422 # text = To investigate the molecular basis of the mitogenic effect of high molecular weight dextran sulfate (HMDS), monocyte-derived macrophages were transfected with recombinant plasmid containing chloramphenicol acetyl transferase (CAT) reporter gene under the control of the HIV-1 long terminal repeat (LTR) promoter, which is regulated by transcription factor NF-kappaB. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 weight weight NOUN NN Number=Sing _ _ _ _ 14 dextran dextran NOUN NN Number=Sing _ _ _ _ 15 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HMDS hmds NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 monocyte monocyte VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 28 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 29 containing contain VERB VBG VerbForm=Ger _ _ _ _ 30 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 31 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 32 transferase transferase NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 reporter reporter NOUN NN Number=Sing _ _ _ _ 37 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 under under ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 control control NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 long long ADJ JJ Degree=Pos _ _ _ _ 47 terminal terminal NOUN NN Number=Sing _ _ _ _ 48 repeat repeat NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 which which PRON WDT PronType=Rel _ _ _ _ 55 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 transcription transcription NOUN NN Number=Sing _ _ _ _ 59 factor factor NOUN NN Number=Sing _ _ _ _ 60 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 423 # text = We observed that HMDS, similar to bacterial lipopolysaccharide (LPS), increases the expression of CAT reporter gene suggesting increased activity of NF-kappaB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HMDS HMDS PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 suggesting suggeste VERB VBG VerbForm=Ger _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 424 # text = The activation of NF-kappaB correlated with the increased expression of B7.1 molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B7.1 B7.1 NUM CD NumType=Card _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 425 # text = It was postulated that this NF-kappaB-regulated promoter might play a role in the activation of the accessory cells as well as the rate of replication of HIV-1 in monocyte-derived macrophages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 kappaB- kappaB- PUNCT : _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 rate rate NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 426 # text = Document 00300237 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300237 00300237 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 427 # text = Monoclonal anti-endothelial cell antibodies from a patient with Takayasu arteritis activate endothelial cells from large vessels. 1 Monoclonal Monoclonal ADJ JJ Degree=Pos _ _ _ _ 2 anti-endothelial anti-endothelial ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 patient patient NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 10 arteritis arteritis PROPN NNPS Number=Plur _ _ _ _ 11 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 large large ADJ JJ Degree=Pos _ _ _ _ 16 vessels vessel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 428 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 429 # text = To create monoclonal anti-endothelial cell antibodies (mAECA) from a patient with Takayasu arteritis to evaluate their ability to activate human umbilical vein endothelial cells (HUVEC), and to characterize the mechanism of EC activation. 1 To to PART TO _ _ _ _ _ 2 create create VERB VB VerbForm=Inf _ _ _ _ 3 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 4 anti-endothelial anti-endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 mAECA mAECa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 patient patient NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 15 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 24 vein vein NOUN NN Number=Sing _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 EC EC PROPN NNP Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 430 # text = METHODS: A panel of mAECA was generated from peripheral blood lymphocytes of a patient with Takayasu arteritis, using Epstein-Barr virus transformation. 1 METHODS methods NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 panel panel NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 18 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Barr Barr PROPN NNP Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 431 # text = Activity against macrovascular EC (HUVEC) and microvascular EC (human bone marrow EC immortalized by SV40) antigens was detected by enzyme-linked immunosorbent assay. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 against against ADP IN _ _ _ _ _ 3 macrovascular macrovascular ADJ JJ Degree=Pos _ _ _ _ 4 EC EC PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 microvascular microvascular ADJ JJ Degree=Pos _ _ _ _ 10 EC EC PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 bone bone NOUN NN Number=Sing _ _ _ _ 14 marrow marrow NOUN NN Number=Sing _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 SV40 SV40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 immunosorbent immunosorbent ADJ JJ Degree=Pos _ _ _ _ 27 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 432 # text = Inhibition studies were used to select the monoclonal antibodies (mAECA) which share the same EC epitope binding specificity as the total IgG-AECA from the Takayasu arteritis patient. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 select select VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 mAECA mAECA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 EC Ec NOUN NN Number=Sing _ _ _ _ 18 epitope epitope NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 specificity specificity NOUN NN Number=Sing _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 total total ADJ JJ Degree=Pos _ _ _ _ 24 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 AECA AECA PROPN NNP Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 30 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 31 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 433 # text = The binding of the mAECA to human aortic EC was studied by immunohistochemistry. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mAECA mAECa PROPN NNP Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 human human VERB VB VerbForm=Inf _ _ _ _ 8 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 434 # text = The secretion levels of interleukin-6 (IL-6) and von Willebrand factor (vWF) were determined, to serve as markers for EC activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 secretion secretion NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 von von PROPN NNP Number=Sing _ _ _ _ 15 Willebrand Willebrand PROPN NNP Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 vWF vWF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 serve serve VERB VB VerbForm=Inf _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 markers marker NOUN NNS Number=Plur _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 EC EC PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 435 # text = The activated EC were examined for the adherence of a monocytic cell line (U937), as well as for expression of vascular cell adhesion molecule 1, intercellular adhesion molecule 1, and E-selectin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 EC Ec PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 adherence adherence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 molecule molecule NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 436 # text = In addition, nuclear extracts of the mAECA-treated EC were analyzed for the induction of translocation of nuclear factor kappaB (NF-kappaB), using a specific NF-kappaB oligoprobe in an electrophoretic mobility shift assay. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mAECA mAECA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 EC Ec PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 using use VERB VBG VerbForm=Ger _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 oligoprobe oligoprobe AUX VB Mood=Imp|VerbForm=Fin _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 39 mobility mobility NOUN NN Number=Sing _ _ _ _ 40 shift shift NOUN NN Number=Sing _ _ _ _ 41 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 437 # text = RESULTS: Six mAECA were selected, the mixture of which produced 100% inhibition of binding of the original IgG (from the patient with Takayasu arteritis) to HUVEC. 1 RESULTS results NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Six six NUM CD NumType=Card _ _ _ _ 4 mAECA maecan NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mixture mixture NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 original original ADJ JJ Degree=Pos _ _ _ _ 21 IgG IgG PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 patient patient NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 28 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 438 # text = All mAECA possessed high activity against macrovascular EC, but none had significant antimicrovascular EC activity. 1 All all DET DT _ _ _ _ _ 2 mAECA mAECa NOUN NN Number=Sing _ _ _ _ 3 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 macrovascular macrovascular ADJ JJ Degree=Pos _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 none none NOUN NN Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 antimicrovascular antimicrovascular ADJ JJ Degree=Pos _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 439 # text = The mAECA, but not normal human IgG, had anti-human aortic EC activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mAECA mAECa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IgG Igg NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 12 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 13 EC EC PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 440 # text = Four of the 6 mAECA activated EC, manifested by increased IL-6 and vWF secretion. 1 Four four NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 6 6 NUM CD NumType=Card _ _ _ _ 5 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 manifested manifest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 vWF vwf NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 441 # text = The 4 mAECA induced EC expression of adhesion molecules and increased adhesion of U937 monocytic cells to EC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 mAECA mAECa NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 442 # text = In addition, these mAECA stimulated the nuclear translocation of the NF-kappaB transcription factor. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 6 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 443 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 444 # text = Our findings suggest that AECA may directly stimulate EC in Takayasu arteritis through elevation of adhesion molecule expression associated with NF-kappaB activation and adhesion of monocytes, and may therefore play a pathogenic role in the development of the vasculopathy in Takayasu arteritis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AECA AECA PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 directly directly ADV RB _ _ _ _ _ 8 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 9 EC EC PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 12 arteritis arteritis ADV RB _ _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 elevation elevation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 therefore therefore ADV RB _ _ _ _ _ 33 play play VERB VB VerbForm=Inf _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 development development NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 45 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 445 # text = Document 00300238 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300238 00300238 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 446 # text = Possible differences in the mechanism(s) of action of different glucocorticoid hormone compounds. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 s s X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ _ 15 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 447 # text = Different glucocorticoid hormones (GCH) show differences in the intensity and in the kinetics of their immunomodulating activity. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 3 hormones hormone NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GCH GCH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 intensity intensity NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 immunomodulating immunomodulating ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 448 # text = The mechanism(s) of action of GCH is under investigation, but is has been noted that they exert immune activity via the genomic pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 action action NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 GCH GCH PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 investigation investigation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 449 # text = We have studied the effects of prednisone (PDN), deflazacort (DFC), and dexamethasone (DXM) on the production of cytokines (IL-2, IL-6, TNF-alpha, IL-10) by peripheral T lymphocytes, and the effects on the inhibition of NF-kB DNA binding activity by activated Jurkat cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 prednisone prednisone NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PDN PDN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 deflazacort deflazacort NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DFC DFC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 DXM DXM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 effects effect NOUN NNS Number=Plur _ _ _ _ 52 on on ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kB kb PROPN NNP Number=Sing _ _ _ _ 59 DNA dna NOUN NN Number=Sing _ _ _ _ 60 binding bind VERB VBG VerbForm=Ger _ _ _ _ 61 activity activity NOUN NN Number=Sing _ _ _ _ 62 by by ADP IN _ _ _ _ _ 63 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 64 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 65 cell cell NOUN NN Number=Sing _ _ _ _ 66 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 450 # text = The data obtained show that the three GCH molecules exert an immunosuppression on cytokine production by T lymphocytes and a strong decrease in the nuclear translocation of NF-kB in Jurkat cells; moreover, (a) not all the cytokines investigated were affected, and not with the same intensity, by the three GCH and (b) DXM inhibited the binding activity of NF-kB less than that of DFC and PDN. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 GCH GCh NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 exert exert ADP IN Typo=Yes _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 strong strong ADJ JJ Degree=Pos _ _ _ _ 22 decrease decrease NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kB kb PROPN NNP Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ; ; PUNCT , _ _ _ _ _ 35 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 a a X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 all all DET PDT _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 44 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 not not ADV RB _ _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 same same ADJ JJ Degree=Pos _ _ _ _ 53 intensity intensity NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 three three NUM CD NumType=Card _ _ _ _ 58 GCH GCh NOUN NN Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 b b X LS _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 DXM DXm PRON PRP Case=Acc|Gender=Masc|Number=Sing|Person=3|PronType=Prs _ _ _ _ 64 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 binding bind VERB VBG VerbForm=Ger _ _ _ _ 67 activity activity NOUN NN Number=Sing _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 kB kb PROPN NNP Number=Sing _ _ _ _ 72 less less ADJ JJR Degree=Cmp _ _ _ _ 73 than than ADP IN _ _ _ _ _ 74 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 75 of of ADP IN _ _ _ _ _ 76 DFC DFC PROPN NNP Number=Sing _ _ _ _ 77 and and CCONJ CC _ _ _ _ _ 78 PDN PDN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 451 # text = These data are in agreement with the concept that different GCH compounds might differ in their binding and affinity properties, tissue-specific metabolism, and interaction with transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 agreement agreement NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 concept concept NOUN NN Number=Sing _ _ _ _ 9 that that ADV WRB PronType=Rel _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 GCH GCh NOUN NN Number=Sing _ _ _ _ 12 compounds compound NOUN NNS Number=Plur _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 differ differ VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 binding binding NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 interaction interaction NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 452 # text = Document 00300239 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300239 00300239 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 453 # text = Abnormal NF-kappa B activity in T lymphocytes from patients with systemic lupus erythematosus is associated with decreased p65-RelA protein expression. 1 Abnormal abnormal PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 14 lupus lupus NOUN NN Number=Sing _ _ _ _ 15 erythematosus erythematosus NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 RelA Rela NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 454 # text = Numerous cellular and biochemical abnormalities in immune regulation have been described in patients with systemic lupus erythematosus (SLE), including surface 1 Numerous numerous ADJ JJ Degree=Pos _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 5 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 patients patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 16 lupus lupus NOUN NN Number=Sing _ _ _ _ 17 erythematosus erythematosus NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 SLE Sle NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ _ # sent_id = 455 # text = Ag receptor-initiated signaling events and lymphokine production. 1 Ag ag VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 6 events event NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 456 # text = Because NF-kappa B contributes to the transcription of numerous inflammatory genes and has been shown to be a molecular target of antiinflammatory drugs, we sought to characterize the functional role of the NF-kappa B protein complex in lupus T cells. 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 target target NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 25 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 28 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 functional functional ADJ JJ Degree=Pos _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 complex complex NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 lupus lupus ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 457 # text = Freshly isolated T cells from lupus patients, rheumatoid arthritis (RA) patients, and normal individuals were activated physiologically via the TCR with anti-CD3 and anti-CD28 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 lupus lupus NOUN NN Number=Sing _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 10 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 physiologically physiologically ADV RB _ _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 TCR Tcr NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ # sent_id = 458 # text = Abs to assess proximal membrane signaling, and with PMA and a calcium ionophore (A23187) to bypass membrane-mediated signaling events. 1 Abs Ab NOUN NNS Number=Plur _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 assess assess VERB VB VerbForm=Inf _ _ _ _ 4 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 PMA Pma PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 calcium calcium NOUN NN Number=Sing _ _ _ _ 14 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 bypass bypass VERB VB VerbForm=Inf _ _ _ _ 20 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 459 # text = We measured the NF-kappa B binding activity in nuclear extracts by gel shift analysis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 binding binde VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 gel gel NOUN NN Number=Sing _ _ _ _ 15 shift shift NOUN NN Number=Sing _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 460 # text = When compared with normal cells, the activation of NF-kappa B activity in SLE patients was significantly decreased in SLE, but not in RA, patients. 1 When when ADV WRB PronType=Int _ _ _ _ 2 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 SLE SLE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 461 # text = NF-kappa B binding activity was absent in several SLE patients who were not receiving any medication, including corticosteroids. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 binding binde VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 SLE Sle PROPN NNP Number=Sing _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 who who PRON WP PronType=Rel _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 17 any any DET DT _ _ _ _ _ 18 medication medication NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 corticosteroids corticosteroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 462 # text = Also, NF-kappa B activity remained absent in follow-up studies. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 absent absent NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 follow follow NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 up up NOUN NN Number=Sing _ _ _ _ 14 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 463 # text = In supershift experiments using specific Abs, we showed that, in the group of SLE patients who displayed undetectable NF-kappa B activity, p65 complexes were not formed. 1 In in ADP IN _ _ _ _ _ 2 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 Abs Ab NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 group group NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 who who PRON WP PronType=Rel _ _ _ _ 19 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 complexes complexe NOUN NNS Number=Plur _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 464 # text = Finally, immunoblot analysis of nuclear extracts showed decreased or absent p65 protein levels. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 p65 p65 NUM CD NumType=Card _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 465 # text = As p65 complexes are transcriptionally active in comparison to the p50 homodimer, this novel finding may provide insight on the origin of abnormal cytokine or other gene transcription in SLE patients. 1 As as ADP IN _ _ _ _ _ 2 p65 p65 NUM CD NumType=Card _ _ _ _ 3 complexes complexe NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcriptionally transcriptionally ADV RB _ _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 comparison comparison NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 p50 p50 NOUN NN Number=Sing _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 novel novel NOUN NN Number=Sing _ _ _ _ 16 finding finding NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 provide provide VERB VB VerbForm=Inf _ _ _ _ 19 insight insight NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 origin origin NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 gene gene ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 32 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 466 # text = Document 00300240 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300240 00300240 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 467 # text = cAMP-dependent regulation of proenkephalin by JunD and JunB: positive and negative effects of AP-1 proteins. 1 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 JunD JunD PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 468 # text = We demonstrate that JunD, a component of the AP-1 transcription factor complex, activates transcription of the human proenkephalin gene in a fashion that is completely dependent upon the cAMP-dependent protein kinase, protein kinase A. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 component component NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 23 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 fashion fashion NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 completely completely ADV RB _ _ _ _ _ 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 upon upon ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 A A NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 469 # text = Activation of proenkephalin transcription by JunD is dependent upon a previously characterized cAMP-, phorbol ester-, and Ca(2+)-inducible enhancer, and JunD is shown to bind the enhancer as a homodimer. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 JunD JunD PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Ca Ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 +) +) SYM NFP _ _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 JunD JunD PROPN NNP Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 bind bind VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 470 # text = Another component of the AP-1 transcription complex, JunB, is shown to inhibit activation mediated by JunD. 1 Another another DET DT _ _ _ _ _ 2 component component NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 471 # text = As a homodimer JunB is unable to bind the enhancer; however in the presence of c-Fos, high-affinity binding is observed. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 4 JunB JunB PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 unable unable ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 however however ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 affinity affinity NOUN NN Number=Sing _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 472 # text = Furthermore, JunD is shown to activate transcription of genes linked to both cAMP and phorbol ester response elements in a protein kinase A-dependent fashion, further blurring the distinction between these response elements. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 JunD JunD PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 ester ester NOUN NN Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 further further SCONJ IN _ _ _ _ _ 30 blurring blurre VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 distinction distinction NOUN NN Number=Sing _ _ _ _ 33 between between ADP IN _ _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 473 # text = These results demonstrate that the transcriptional activity of an AP-1-related protein is regulated by the cAMP-dependent second-messenger pathway and suggest that JunD and other AP-1-related proteins may play an important role in the regulation of gene expression by cAMP-dependent intracellular signaling pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 related related ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 messenger messenger NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 JunD JunD PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 related relate ADJ JJ Degree=Pos _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 play play VERB VB VerbForm=Inf _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 regulation regulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 cAMP camp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 54 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 55 signaling signaling NOUN NN Number=Sing _ _ _ _ 56 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 474 # text = Document 00300241 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300241 00300241 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 475 # text = Triggering of the human interleukin-6 gene by interferon-gamma and tumor necrosis factor-alpha in monocytic cells involves cooperation between interferon regulatory factor-1, NF kappa B, and Sp1 transcription factors. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 476 # text = We investigated the molecular basis of the synergistic induction by interferon-gamma (IFN-gamma)/tumor necrosis factor-alpha (TNF-alpha) of human interleukin-6 (IL-6) gene in THP-1 monocytic cells, and compared it with the basis of this induction by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 basis basis NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 56 induction induction NOUN NN Number=Sing _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 477 # text = Functional studies with IL-6 promoter demonstrated that three regions are the targets of the IFN-gamma and/or TNF-alpha action, whereas only one of these regions seemed to be implicated in LPS activation. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 regions region NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 targets target NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 or or CCONJ CC _ _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 whereas whereas SCONJ IN _ _ _ _ _ 29 only only ADV RB _ _ _ _ _ 30 one one NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 regions region NOUN NNS Number=Plur _ _ _ _ 34 seemed seem VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 478 # text = The three regions concerned are: 1) a region between -73 and -36, which is the minimal element inducible by LPS or TNF-alpha; 2) an element located between -181 and -73, which appeared to regulate the response to IFN-gamma and TNF-alpha negatively; and 3) a distal element upstream of -224, which was inducible by IFN-gamma alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 regions region NOUN NNS Number=Plur _ _ _ _ 4 concerned concern ADJ JJ Degree=Pos _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 1 1 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 73 73 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 LPS Lp PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ; ; PUNCT , _ _ _ _ _ 31 2 2 X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 element element NOUN NN Number=Sing _ _ _ _ 35 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 between between ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 181 181 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 73 73 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 which which PRON WDT PronType=Rel _ _ _ _ 44 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 response response NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 gamma gamma NOUN NN Number=Sing _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 alpha alpha NOUN NN Number=Sing _ _ _ _ 57 negatively negatively ADV RB _ _ _ _ SpaceAfter=No 58 ; ; PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 3 3 X LS _ _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ _ 62 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 63 distal distal ADJ JJ Degree=Pos _ _ _ _ 64 element element NOUN NN Number=Sing _ _ _ _ 65 upstream upstream NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 - - SYM SYM _ _ _ _ SpaceAfter=No 68 224 224 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 which which PRON WDT PronType=Rel _ _ _ _ 71 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 72 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 73 by by ADP IN _ _ _ _ _ 74 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 gamma gamma NOUN NN Number=Sing _ _ _ _ 77 alone alone ADV RB _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 479 # text = LPS signaling was found to involve NF kappa B activation by the p50/p65 heterodimers. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 involve involve VERB VB VerbForm=Inf _ _ _ _ 7 NF NF ADP RP _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 480 # text = Synergistic induction of the IL-6 gene by IFN-gamma and TNF-alpha, in monocytic cells, involved cooperation between the IRF-1 and NF kappa B p65 homodimers with concomitant removal of the negative effect of the retinoblastoma control element present in the IL-6 promoter. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 involved involve ADJ JJ Degree=Pos _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ _ 34 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 37 removal removal NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 negative negative ADJ JJ Degree=Pos _ _ _ _ 41 effect effect NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 45 control control NOUN NN Number=Sing _ _ _ _ 46 element element NOUN NN Number=Sing _ _ _ _ 47 present present ADJ JJ Degree=Pos _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 6 6 NUM CD NumType=Card _ _ _ _ 53 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 481 # text = This removal occurred by activation of the constitutive Sp1 factor, whose increased binding activity and phosphorylation were mediated by IFN-gamma. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 removal removal NOUN NN Number=Sing _ _ _ _ 3 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 482 # text = Document 00300242 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300242 00300242 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 483 # text = The involvement of multiple tumor necrosis factor receptor (TNFR)-associated factors in the signaling mechanisms of receptor activator of NF-kappaB, a member of the TNFR superfamily. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TNFR TNFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 activator activator NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 member member NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 TNFR TNFR PROPN NNP Number=Sing _ _ _ _ 32 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 484 # text = Receptor activator of NF-kappaB (RANK) is a recently identified member of the tumor necrosis factor receptor superfamily and is expressed on activated T cells and dendritic cells. 1 Receptor Receptor NOUN NN Number=Sing _ _ _ _ 2 activator activator NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RANK rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 identified identify ADJ JJ Degree=Pos _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 superfamily superfamily ADV RB _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 485 # text = Its cognate ligand (RANKL) plays significant roles in the activation of dendritic cell function and osteoclast differentiation. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 3 ligand ligand NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 RANKL RANKL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 significant significant ADJ JJ Degree=Pos _ _ _ _ 9 roles role NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 osteoclast osteoclast ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 486 # text = We demonstrate here the interaction of RANK with tumor necrosis factor receptor-associated factors (TRAFs) 1, 2, 3, 5, and 6 both in vitro and in cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RANK rank PROPN NNP Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TRAFs Trafs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 6 6 NUM CD NumType=Card _ _ _ _ 29 both both CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 487 # text = Mapping of the structural requirements for TRAF/RANK interaction revealed multiple TRAF binding sites clustered in two distinct domains in the RANK cytoplasmic tail. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 structural structural ADJ JJ Degree=Pos _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 TRAF TRAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 RANK rank PROPN NNP Number=Sing _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 TRAF Traf SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 clustered cluster VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 domains domains NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 RANK rank PROPN NNP Number=Sing _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 25 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 488 # text = These TRAF binding domains were shown to be functionally important for the RANK-dependent induction of NF-kappaB and c-Jun NH2-terminal kinase activities. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 TRAF Traf NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 domains domain NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 functionally functionally ADV RB _ _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 RANK Rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 c care NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ _ 25 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -terminal -terminal ADJ JJ Degree=Pos _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 489 # text = Site-directed mutagenesis demonstrated that these TRAF binding sites exhibited selective binding for different TRAF proteins. 1 Site site PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 mutagenesis mutagenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 TRAF Traf NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 exhibited exhibite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 selective selective ADJ JJ Degree=Pos _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 TRAF TRAF PROPN NNP Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 490 # text = In particular, TRAF6 interacted with membrane-proximal determinants distinct from those binding TRAFs 1, 2, 3, and 5. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TRAF6 Traf6 PROPN NNP Number=Sing _ _ _ _ 5 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 10 determinants determinant NOUN NNS Number=Plur _ _ _ _ 11 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 TRAFs TRAFs ADV RB _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 491 # text = When this membrane-proximal TRAF6 interaction domain was deleted, RANK-mediated NF-kappaB signaling was completely inhibited while c-Jun NH2-terminal kinase activation was partially inhibited. 1 When when ADV WRB PronType=Int _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 6 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 RANK Rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 completely completely ADV RB _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 while while SCONJ IN _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ _ 25 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 partially partially ADV RB _ _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 492 # text = An NH2-terminal truncation mutant of TRAF6 inhibited RANKL-mediated NF-kappaB activation, but failed to affect constitutive signaling induced by receptor overexpression, revealing a selective role for TRAF6 in ligand-induced activation events. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 truncation truncation NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 RANKL Rankl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 affect affect VERB VB VerbForm=Inf _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 selective selective ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 ligand ligand NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 493 # text = Document 00300243 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300243 00300243 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 494 # text = Monocytic cell type-specific transcriptional induction of collagenase. 1 Monocytic Monocytic ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 495 # text = Interstitial collagenase (MMP-1), a metalloproteinase produced by resident and inflammatory cells during connective tissue turnover, cleaves type I collagen fibrils. 1 Interstitial Interstitial ADJ JJ Degree=Pos _ _ _ _ 2 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 MMP Mmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 11 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 resident resident NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 connective connective ADJ JJ Degree=Pos _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ _ 20 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 cleaves cleave NOUN NNS Number=Plur _ _ _ _ 23 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 collagen collagen ADJ JJ Degree=Pos _ _ _ _ 26 fibrils fibril NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 496 # text = This catalytic event is rate limiting in remodeling of tissues rich in fibrillar collagen such as the skin and lungs. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ _ 6 limiting limit VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ _ 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 fibrillar fibrillar ADJ JJ Degree=Pos _ _ _ _ 14 collagen collagen NOUN NNS Number=Plur _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 skin skin NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lungs lung NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 497 # text = The regulation of collagenase expression is cell-type specific; bacterial LPS and zymosan, a yeast cell wall derivative, are potent inducers of collagenase expression in macrophages, but do not alter fibroblast collagenase expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lps NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 zymosan zymosan NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 yeast yeast ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 wall wall NOUN NN Number=Sing _ _ _ _ 21 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 potent potent ADJ JJ Degree=Pos _ _ _ _ 25 inducers inducer NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 alter alter VERB VB VerbForm=Inf _ _ _ _ 36 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 37 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 498 # text = Since promoter elements controlling collagenase transcription in monocytic cells have not been previously defined, we sought to delineate responsive cis-acting elements of the collagenase promoter in transiently transfected human (U937) and murine (J774) monocytic cell lines. 1 Since since SCONJ IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 5 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 20 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 21 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 23 elements element NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 transiently transiently ADV RB _ _ _ _ _ 30 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 human human NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 murine murine NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 J774 J774 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 499 # text = Deletion constructs containing as little as 72 bp of 5' -flanking sequence of the collagenase promoter were sufficient for LPS- or zymosan-mediated transcriptional induction, whereas phorbol inducibility exhibited an absolute requirement for upstream elements including the polyoma enhancer A-binding protein-3 site (-83 to -91) and TTCA sequence (-102 to -105) in both monocytic cells and fibroblasts. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 constructs construct NOUN NNS Number=Plur _ _ _ _ 3 containing contain VERB VBG VerbForm=Ger _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 little little ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 72 72 NUM CD NumType=Card _ _ _ _ 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ _ 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 zymosan zymosan NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 33 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 34 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 absolute absolute ADJ JJ Degree=Pos _ _ _ _ 37 requirement requirement NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ _ 41 including include VERB VBG VerbForm=Ger _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 polyoma polyoma NOUN NN Number=Sing _ _ _ _ 44 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 45 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 binding bind VERB VBG VerbForm=Ger _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 3 3 NUM CD NumType=Card _ _ _ _ 51 site site NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 -83 -83 NUM CD NumType=Card _ _ _ _ 54 to to ADP IN _ _ _ _ _ 55 - - SYM SYM _ _ _ _ SpaceAfter=No 56 91 91 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 TTCA Ttca PROPN NNP Number=Sing _ _ _ _ 60 sequence sequence NOUN NN Number=Sing _ _ _ _ 61 (- (- PUNCT . _ _ _ _ SpaceAfter=No 62 102 102 NUM CD NumType=Card _ _ _ _ 63 to to ADP IN _ _ _ _ _ 64 - - SYM SYM _ _ _ _ SpaceAfter=No 65 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 ) ) PUNCT -RRB- _ _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 both both DET DT _ _ _ _ _ 69 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 70 cells cell NOUN NNS Number=Plur _ _ _ _ 71 and and CCONJ CC _ _ _ _ _ 72 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 73 . . PUNCT . _ _ _ _ _ # sent_id = 500 # text = Mutagenesis of the activator protein-1 [AP-1] site at -72 abolished basal promoter activity and LPS/zymosan inducibility, while mutagenesis of an NF-kappaB-like site at -20 to -10 had no effect. 1 Mutagenesis Mutagenesis PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activator activator NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ] ] PUNCT -RRB- _ _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 72 72 NUM CD NumType=Card _ _ _ _ 17 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 basal basal ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 zymosan zymosan ADJ JJ Degree=Pos _ _ _ _ 25 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 like like ADJ JJ Degree=Pos _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 20 20 NUM CD NumType=Card _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 10 10 NUM CD NumType=Card _ _ _ _ 43 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 no no DET DT _ _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 501 # text = Nuclear extracts from LPS- and zymosan-treated cells showed strong AP-1 activity by gel-shift analysis, and supershift analysis showed the AP-1 complexes contained specific members of both the jun and fos gene families. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 zymosan zymosan ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 shift shift NOUN NN Number=Sing _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ _ 26 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 complexes complexe NOUN NNS Number=Plur _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 members member NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 both both CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 jun jun NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 fos fo NOUN NNS Number=Plur _ _ _ _ 41 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 502 # text = These data indicate that, in contrast to most LPS effects, AP-1, but not nuclear factor-kappaB, mediates LPS induction of collagenase transcription in macrophagelike cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 contrast contrast NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 most most ADJ JJS Degree=Sup _ _ _ _ 10 LPS Lps NOUN NN Number=Sing _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 LPS Lp ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 macrophagelike macrophagelike ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 503 # text = Furthermore, as compared to regulation by phorbol ester, collagenase induction in monocytic cells by cell wall derivatives of bacteria or yeast is largely independent of upstream promoter sequences. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 wall wall NOUN NN Number=Sing _ _ _ _ 19 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 yeast yeast NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 largely largely ADV RB _ _ _ _ _ 26 independent independent ADJ JJ Degree=Pos _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 504 # text = Document 00300244 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300244 00300244 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 505 # text = CD30-dependent degradation of TRAF2: implications for negative regulation of TRAF signaling and the control of cell survival. 1 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 3 degradation degradation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 implications implication NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TRAF Traf NOUN NN Number=Sing _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 506 # text = CD30 is a cell-surface receptor that can augment lymphocyte activation and survival through its ability to induce the transcription factor NF-kappaB. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 augment augment VERB VB VerbForm=Inf _ _ _ _ 11 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 survival survival NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 ability ability NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 507 # text = CD30, however, has also been implicated in the induction of apoptotic cell death of lymphocytes. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 however however ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 death death NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 508 # text = Here we show that one of the effects of CD30 signal transduction is to render cells sensitive to apoptosis induced by the type 1 tumor necrosis factor receptor (TNFR1). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD30 CD30 NUM CD NumType=Card _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 render render VERB VB VerbForm=Inf _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 type type NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNFR1 TNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 509 # text = This sensitization is dependent on the TRAF-binding sites within the CD30 cytoplasmic domain. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sensitization sensitization NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TRAF Traf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 510 # text = One of the proteins that binds to these sites is TRAF2, a signal transduction molecule that is also utilized by TNFR1 to mediate the activation of several downstream kinases and transcription factors. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 molecule molecule NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 TNFR1 tNFR1 PROPN NNP Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 30 kinases kinase NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 511 # text = During CD30 signal transduction, we found that binding of TRAF2 to the cytoplasmic domain of CD30 results in the rapid depletion of TRAF2 and the associated protein TRAF1 by proteolysis. 1 During during ADP IN _ _ _ _ _ 2 CD30 CD30 NUM CD NumType=Card _ _ _ _ 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TRAF2 Traf2 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CD30 CD30 NUM CD NumType=Card _ _ _ _ 18 results result NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 22 depletion depletion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 TRAF1 tRAF1 NUM CD NumType=Card _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 512 # text = These data suggest a model in which CD30 limits its own ability to transduce cell survival signals through signal-coupled depletion of TRAF2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 9 limits limit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 own own ADJ JJ Degree=Pos _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 coupled coupl VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 depletion depletion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 513 # text = Depletion of intracellular TRAF2 and its coassociated proteins also increased the sensitivity of the cell to undergoing apoptosis during activation of death-inducing receptors such as TNFR1. 1 Depletion Depletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 4 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 coassociated coassociate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 undergoing undergoing ADJ JJ Degree=Pos _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 TNFR1 TNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 514 # text = Consistent with this hypothesis, expression of a dominant-negative form of TRAF2 was found to potentiate TNFR1-mediated death. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 form form NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TRAF2 TRAF2 NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 19 TNFR1 tNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 515 # text = These studies provide a potential mechanism through which CD30, as well as other TRAF-binding members of the TNFR superfamily, can negatively regulate cell survival. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential NOUN NN Number=Sing _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 TRAF Traf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TNFR TNFR PROPN NNP Number=Sing _ _ _ _ 22 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 negatively negatively ADV RB _ _ _ _ _ 26 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 516 # text = Document 00300245 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300245 00300245 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 517 # text = Active suppression of the class II transactivator-encoding AIR-1 locus is responsible for the lack of major histocompatibility complex class II gene expression observed during differentiation from B cells to plasma cells. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 AIR AIR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 during during ADP IN _ _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 plasma plasma NOUN NN Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 518 # text = In this study the genetic control of major histocompatibility complex (MHC) class II gene expression during the transition from B cell to plasma cell has been analyzed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 6 control control NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transition transition NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 plasma plasma NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 519 # text = Class II molecules are not expressed in plasma cells because of an active suppression resulting in the abrogation of class II gene transcription. 1 Class class VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ _ 3 molecules molecule NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 plasma plasma NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 because because ADP IN _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 active active ADJ JJ Degree=Pos _ _ _ _ 14 suppression suppression NOUN NN Number=Sing _ _ _ _ 15 resulting result VERB VBG VerbForm=Ger _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 abrogation abrogation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 520 # text = We show here that the plasma cell-specific repressor function, designated SIR (suppressor of immune response genes), does not act directly on the transcription of class II genes, but instead on the transcription of the AIR-1 gene, whose product, the class II transactivator (CIITA), is fundamental for the regulation of the constitutive and inducible expression of MHC class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 plasma plasma NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 repressor repressor NOUN NN Number=Sing _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 SIR Sir NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 immune immune ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 act act VERB VB VerbForm=Inf _ _ _ _ 26 directly directly ADV RB _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 instead instead ADV RB _ _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 AIR Air PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 48 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 class class NOUN NN Number=Sing _ _ _ _ 52 II ii NUM CD NumType=Card _ _ _ _ 53 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 59 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 60 for for ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 regulation regulation NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 68 expression expression NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 MHC MHC PROPN NNP Number=Sing _ _ _ _ 71 class class NOUN NN Number=Sing _ _ _ _ 72 II ii NUM CD NumType=Card _ _ _ _ 73 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 74 . . PUNCT . _ _ _ _ _ # sent_id = 521 # text = This was unambiguously demonstrated by the fact that plasmacytoma x B cell hybrids carrying an AIR-1 locus derived from CIITA-expressing cells do not express CIITA-specific transcripts. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 unambiguously unambiguously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 10 x x SYM SYM _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 14 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 AIR AIR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 locus locus NOUN NN Number=Sing _ _ _ _ 20 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 express express VERB VB VerbForm=Inf _ _ _ _ 29 CIITA CIITa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 522 # text = Transfection of a cDNA containing the human CIITA coding sequence under the control of an heterologous promoter restores expression of human MHC class II genes in the hybrids and is responsible for de novo expression of mouse MHC class II genes in both the mouse plasmacytoma cell line and the hybrids. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 9 coding code NOUN NN Number=Sing _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 restores restore NOUN NNS Number=Plur _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 MHC MHC PROPN NNP Number=Sing _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 de de PROPN NNP Number=Sing _ _ _ _ 34 novo novo PROPN NNP Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 mouse mouse NOUN NN Number=Sing _ _ _ _ 38 MHC MHC PROPN NNP Number=Sing _ _ _ _ 39 class class NOUN NN Number=Sing _ _ _ _ 40 II ii NUM CD NumType=Card _ _ _ _ 41 genes gene NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 both both CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 mouse mouse NOUN NN Number=Sing _ _ _ _ 46 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 line line NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 523 # text = These results confirm and extend the notion of the functional conservation of the AIR-1 gene product across species barriers. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 extend extend VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 notion notion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 conservation conservation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AIR Air PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 product product NOUN NN Number=Sing _ _ _ _ 19 across across ADP IN _ _ _ _ _ 20 species species NOUN NNS Number=Plur _ _ _ _ 21 barriers barrier NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 524 # text = Interestingly, in CIITA-transfected cell hybrids, cell surface expression of the human HLA-DQ heterodimer was not observed. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DQ Dq PROPN NNP Number=Sing _ _ _ _ 19 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 525 # text = This result was not attributable to lack of HLA-DQ alpha or -DQ beta transcription, because both transcripts were present in the CIITA-transfected hybrids, although at reduced levels. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 lack lack NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DQ Dq PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 DQ Dq ADJ JJ Degree=Pos _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 present present ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 although although SCONJ IN _ _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 526 # text = These findings further support our previous observations on the distinct regulation of expression of the human HLA-DQ class II subset, which may be thus controlled at the posttranscriptional level by a CIITA-independent mechanism. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 observations observation NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DQ Dq NOUN NN Number=Sing _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 subset subset NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 thus thus ADV RB _ _ _ _ _ 28 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 independent independent ADJ JJ Degree=Pos _ _ _ _ 38 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 527 # text = Document 00300246 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300246 00300246 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 528 # text = An isotype-specific activator of major histocompatibility complex (MHC) class II genes that is independent of class II transactivator. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 3 activator activator NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 529 # text = Patients with one type of major histocompatibility complex class II combined immunodeficiency have mutations in a gene termed class II transactivator (CIITA), which coordinately controls the transcription of the three major human class II genes, HLA-DR, -DQ, and -DP. 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mutations mutation NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 coordinately coordinately ADV RB _ _ _ _ _ 28 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 three three NUM CD NumType=Card _ _ _ _ 34 major major ADJ JJ Degree=Pos _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 class class NOUN NN Number=Sing _ _ _ _ 37 II ii NUM CD NumType=Card _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 DR dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 DQ Dq NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 DP DP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 530 # text = However, the experimentally derived B-lymphoblastoid cell line, clone 13, expresses high levels of HLADQ in the absence of HLA-DR and HLA-DP, despite its mapping by complementation analysis to this group. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 experimentally experimentally ADV RB _ _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ _ 13 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HLADQ HLADq NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 absence absence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 DR dr PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 DP DP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 despite despite ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 mapping mapping NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 complementation complementation NOUN NN Number=Sing _ _ _ _ 37 analysis analysis NOUN NN Number=Sing _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 40 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 531 # text = It was possible that one of the clone 13 CIITA alleles bore a mutation that allowed HLA-DQ, but not HLA-DR or -DP transcription. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 alleles allele NOUN NNS Number=Plur _ _ _ _ 12 bore bear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutation mutation NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DQ Dq PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DR dr PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DP Dp ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 532 # text = Alternatively, another factor, distinct from CIITA, might control HLA-DQ expression. 1 Alternatively Alternatively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 another another DET DT _ _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 might might AUX MD VerbForm=Fin _ _ _ _ 11 control control VERB VB VerbForm=Inf _ _ _ _ 12 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 DQ Dq PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 533 # text = We report here that ectopic expression of CIITA cDNAs derived by reverse transcriptase polymerase chain reaction from clone 13 do not restore expression of HLA-DQ in another CIITA-deficient cell line, RJ2.2.5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 9 cDNAs cDNAs NOUN NNS Number=Plur _ _ _ _ 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 reverse reverse NOUN NN Number=Sing _ _ _ _ 13 transcriptase transcriptase NOUN NN Number=Sing _ _ _ _ 14 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 reaction reaction NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 clone clone NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ _ 20 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 restore restore VERB VB VerbForm=Inf _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 DQ Dq PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 another another DET DT _ _ _ _ _ 30 CIITA CIITa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 RJ RJ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 2.2.5 2.2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 534 # text = In addition, no CIITA protein is detectable in clone 13 nuclear extracts. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 clone clone NOUN NN Number=Sing _ _ _ _ 11 13 13 NUM CD NumType=Card _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 535 # text = In contrast, somatic cell fusion between clone 13 and RJ2.2.5 restored expression of the HLA-DQ haplotype encoded by the RJ2.2.5 DQB gene. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RJ2.2.5 RJ2.2.5 NUM CD NumType=Card _ _ _ _ 12 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DQ Dq PROPN NNP Number=Sing _ _ _ _ 19 haplotype haplotype NOUN NN Number=Sing _ _ _ _ 20 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 RJ2.2.5 RJ2.2.5 PROPN NNP Number=Sing _ _ _ _ 24 DQB DQB PROPN NNP Number=Sing _ _ _ _ 25 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 536 # text = Taken together, these data demonstrate the existence of an HLA-DQ isotype-specific trans-acting factor, which functions independently of CIITA. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 existence existence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DQ Dq NOUN NN Number=Sing _ _ _ _ 14 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 15 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 acting act VERB VBG VerbForm=Ger _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 independently independently ADV RB _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 537 # text = Document 00300247 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300247 00300247 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 538 # text = CIITA activates the expression of MHC class II genes in mouse T cells. 1 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 539 # text = It has long been a puzzle that MHC class II molecules are expressed in human T cells after activation but not in mouse T cells; this expression is believed to play a role in the cell mediated immune response. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 long long ADV RB Degree=Pos _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 puzzle puzzle NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 play play VERB VB VerbForm=Inf _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 role role NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 540 # text = Recently the MHC class II transactivator (CIITA) has been reported to be a major regulatory factor for both the constitutive and IFN inducible expression of MHC class II genes. 1 Recently recently ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 MHC MHC PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 MHC MHC PROPN NNP Number=Sing _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 541 # text = Here we show that human T cells expressing MHC class II have CIITA transcripts while MHC class II-negative human T cells and mouse T cells do not. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II II PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 14 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 MHC MHC PROPN NNP Number=Sing _ _ _ _ 17 class class NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 do do VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 542 # text = The expression of MHC class II genes in mouse T cells can be reconstituted upon transfection with the human CIITA cDNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 MHC MHC PROPN NNP Number=Sing _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 transfection transfection NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 21 cDNA cDNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 543 # text = These data indicate that the expression of CIITA explains the expression or lack of expression of MHC class II in human and mouse T cells respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 9 explains explain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 lack lack NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MHC MHC PROPN NNP Number=Sing _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 544 # text = Document 00300248 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300248 00300248 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 545 # text = Membrane-associated lymphotoxin on natural killer cells activates endothelial cells via an NF-kappaB-dependent pathway. 1 Membrane membrane PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 natural natural ADJ JJ Degree=Pos _ _ _ _ 7 killer killer NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 546 # text = BACKGROUND: 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 547 # text = Inhibition of complement in small animal models of xenotransplantation has demonstrated graft infiltration with natural killer (NK) cells and monocytes associated with endothelial cell (EC) activation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 complement complement NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 animal animal NOUN NN Number=Sing _ _ _ _ 7 models model NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 xenotransplantation xenotransplantation NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 graft graft NOUN NN Number=Sing _ _ _ _ 13 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 natural natural ADJ JJ Degree=Pos _ _ _ _ 16 killer killer NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 548 # text = We have previously demonstrated that human NK cells activate porcine EC in vitro, which results in adhesion molecule expression and cytokine secretion. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 NK Nk PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 porcine porcine PRON PRP _ _ _ _ _ 11 EC EC PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which DET WDT PronType=Int _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 549 # text = In this study, we used the NK cell line NK92 to define the molecular and cellular basis of NK cell-mediated EC activation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NK NK PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 NK92 Nk92 NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 define define VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 basis basis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NK NK PROPN NNP Number=Sing _ _ _ _ 21 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 EC Ec PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 550 # text = METHODS: EC were transfected with either reporter constructs containing the luciferase gene driven either by E-selectin or interleukin (IL)-8 promoters or a synthetic NF-kappaB-dependent promoter. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 EC Ec PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 either either DET DT _ _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 selectin selectin NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 8 8 NUM CD NumType=Card _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 551 # text = In addition, a dominant-negative mutant tumor necrosis factor receptor 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 552 # text = I (TNFRI) expression vector was co-transfected in inhibition studies. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TNFRI TNFRI X AFX _ _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 vector vector NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 553 # text = Forty-eight hours after transfection, EC were stimulated with NK cells or NK cell membrane extracts for 7 hr and activation was measured by a luciferase assay. 1 Forty Forty INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 eight eight NUM CD NumType=Card _ _ _ _ 4 hours hour NOUN NNS Number=Plur _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 NK NK PROPN NNP Number=Sing _ _ _ _ 16 cell cell VERB VB VerbForm=Inf _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 extracts extract NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 7 7 NUM CD NumType=Card _ _ _ _ 21 hr hr NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 29 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 554 # text = RESULTS: Co-culture of NK cells with transfected EC enhanced E-selectin, IL-8, and NF-kappaB-dependent promoter activity. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Co-culture Co-culture NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NK NK PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 555 # text = NK cell membrane extracts retained the capacity to activate EC and induced nuclear translocation of NF-kappaB (p50 and p65). 1 NK NK PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 retained retain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 EC EC PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 p50 p50 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 556 # text = Western blotting of NK cell and membrane extracts detected the presence of Lymphotoxin-alpha (LTalpha) but not tumor necrosis factor-alpha. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NK NK PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 presence presence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Lymphotoxin Lymphotoxin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LTalpha LTalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 tumor tumor ADP IN _ _ _ _ _ 22 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 557 # text = Furthermore, LTalpha was secreted in NK:EC co-cultures. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LTalpha LTalpha PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NK:EC Nk:ec PROPN NNP Number=Sing _ _ _ _ 8 co-cultures co-culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 558 # text = Co-transfection with dominant-negative mutant TNFRI inhibited EC activation by NK cell membrane extracts and by NK cells by 80% and 47%, respectively. 1 Co-transfection Co-transfection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 TNFRI Tnfri PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ _ 15 extracts extract NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 NK NK PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 559 # text = The same pattern of inhibition was observed using anti-human LT sera. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 pattern pattern NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 10 LT Lt NOUN NN Number=Sing _ _ _ _ 11 sera sera NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 560 # text = CONCLUSIONS: Human NK cell membrane-bound LT signals across species via TNFRI, leading to NF-kappaB nuclear translocation and transcription of E-selectin and IL-8, which results in EC activation. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Human human ADJ JJ Degree=Pos _ _ _ _ 4 NK NK PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 LT Lt NOUN NN Number=Sing _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 across across ADP IN _ _ _ _ _ 12 species species NOUN NNS Number=Plur _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 leading lead VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 selectin selectin NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which DET WDT PronType=Int _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 EC EC PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 561 # text = The discrepancy in the degree of inhibition by membrane extracts and NK cells with mutant TNFRI suggests that additional pathways are utilized by NK cells to activate EC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 discrepancy discrepancy NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 degree degree NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 membrane membrane ADJ JJ Degree=Pos _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ _ 17 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 additional additional ADJ JJ Degree=Pos _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 NK NK PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 activate activate VERB VB VerbForm=Inf _ _ _ _ 28 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 562 # text = Document 00300249 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300249 00300249 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 563 # text = NF-kappaB only partially mediates Epstein-Barr virus latent membrane protein 1 activation of B cells. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 latent latent ADJ JJ Degree=Pos _ _ _ _ 12 membrane membrane NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 564 # text = The latent membrane protein 1 (LMP1) of Epstein-Barr virus (EBV) is required for EBV-induced immortalization of human B cells and causes tumorigenic transformation of cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latent latent ADJ JJ Degree=Pos _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LMP1 LMP1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 causes cause NOUN NNS Number=Plur _ _ _ _ 30 tumorigenic tumorigenic ADJ JJ Degree=Pos _ _ _ _ 31 transformation transformation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 565 # text = LMP1 expression induces phenotypic changes resembling B cell activation, such as cell size increase and up-regulation of cell surface activation markers. 1 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 size size NOUN NN Number=Sing _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 566 # text = LMP1 contains two domains that activate the transcription factor NF-kappaB, one through interactions with TRAF proteins and the other with the TRADD protein. 1 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 domains domain NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 interactions interaction NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 TRAF TRAF NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 567 # text = The purpose of the present study was to investigate the importance of NF-kappaB induction in the up-regulation of the B cell activation markers ICAM-1 and CD71 by LMP1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 importance importance NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 markers marker NOUN NNS Number=Plur _ _ _ _ 28 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 CD71 CD71 PROPN NNP Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 568 # text = This study shows that expression of LMP1 activates transcription from p50/p65- and c-Rel- responsive promoters, and that this activity can be completely inhibited by expression of a dominant inhibitory IkappaB mutant. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 8 activates activate NOUN NNS Number=Plur _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 p50/p65- p50/p65- PUNCT : _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 completely completely ADV RB _ _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 33 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 34 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 35 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 569 # text = ICAM-1 and CD71 are nevertheless up-regulated by LMP1 in primary B cells and cell lines expressing the dominant IkappaB. 1 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 CD71 Cd71 PROPN NNP Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 nevertheless nevertheless ADV RB _ _ _ _ _ 8 up up ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 LMP1 Lmp1 PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 570 # text = Furthermore, LMP1-induced cell size increase of primary B cells was unaffected by IkappaB expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 size size NOUN NN Number=Sing _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 571 # text = It was concluded that even when LMP1 is unable to activate NF-kappaB, it is still capable of inducing certain characteristics of activated B cells, strongly suggesting that LMP1 can also activate cells independently of NF-kappaB. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 even even ADV RB _ _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 unable unable ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 still still ADV RB _ _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 certain certain ADJ JJ Degree=Pos _ _ _ _ 23 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 strongly strongly ADV RB _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 activate activate VERB VB VerbForm=Inf _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 independently independently ADV RB _ _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 572 # text = Document 00300250 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300250 00300250 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 573 # text = Cell-specific bifunctional role of Jun oncogene family members on glucocorticoid receptor-dependent transcription. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 bifunctional bifunctional ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 574 # text = Interaction between protein kinase C (PKC)- and glucocorticoid receptor (GR)-mediated signaling is suggested by the ability of the PKC activating phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TPA) to inhibit GR-dependent transcription of the mouse mammary tumor virus (MMTV) long terminal repeat (LTR). 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PKC Pkc NOUN NN Number=Sing _ _ _ _ 27 activating activat VERB VBG VerbForm=Ger _ _ _ _ 28 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 29 ester ester NOUN NN Number=Sing _ _ _ _ 30 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 38 GR Gr ADV RB _ _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 mouse mouse NOUN NN Number=Sing _ _ _ _ 45 mammary mammary NOUN NN Number=Sing _ _ _ _ 46 tumor tumor NOUN NN Number=Sing _ _ _ _ 47 virus virus NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 long long ADJ JJ Degree=Pos _ _ _ _ 52 terminal terminal NOUN NN Number=Sing _ _ _ _ 53 repeat repeat NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 575 # text = Here we report that this interference is cell specific, as TPA augmented dexamethasone-induced transcriptional activation of the MMTV LTR in several T cell lines but was inhibitory in NIH-3T3 fibroblasts. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 interference interference NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 TPA TPA PROPN NNP Number=Sing _ _ _ _ 13 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 22 LTR LTR PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 NIH NIH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 3T3 3T3 NUM CD NumType=Card _ _ _ _ 35 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 576 # text = TPA-GR synergism was determined to have occurred at the GR-responsive element (GRE) level by functional analysis of deletion mutants or synthetic GRE oligonucleotides driving chloramphenicol acetyl-transferase expression. 1 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 GR Gr NOUN NN Number=Sing _ _ _ _ 4 synergism synergism NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determined ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 have have AUX VB VerbForm=Inf _ _ _ _ 9 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 functional functional ADJ JJ Degree=Pos _ _ _ _ 22 analysis analysis NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 deletion deletion NOUN NN Number=Sing _ _ _ _ 25 mutants mutant NOUN NNS Number=Plur _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 28 GRE Gre NOUN NN Number=Sing _ _ _ _ 29 oligonucleotides oligonucleotide SCONJ IN _ _ _ _ _ 30 driving drive VERB VBG VerbForm=Ger _ _ _ _ 31 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 32 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 transferase transferase NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 577 # text = Synergism required an intact GR DNA-binding domain, whereas amino- or carboxyl-terminal domains were dispensable. 1 Synergism Synergism PROPN NNP Number=Sing _ _ _ _ 2 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 intact intact ADJ JJ Degree=Pos _ _ _ _ 5 GR Gr NOUN NN Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas whereas SCONJ IN _ _ _ _ _ 12 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 domains domain NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 dispensable dispensable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 578 # text = The effect was abrogated by the PKC inhibitor staurosporine, suggesting a role for PKC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PKC PKC NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 staurosporine staurosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 579 # text = Increased c-jun, jun-B, and jun-D expression above basal levels and increased transcriptional activity of AP-1/TPA responsive elements fused to chloramphenicol acetyl-transferase vectors were observed in T cells treated with TPA alone or in combination with dexamethasone. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 jun jun ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -D -d ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 above above ADP IN _ _ _ _ _ 13 basal basal ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 24 TPA TPa NOUN NN Number=Sing _ _ _ _ 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 chloramphenicol chloramphenicol VERB VB VerbForm=Inf _ _ _ _ 30 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 transferase transferase NOUN NN Number=Sing _ _ _ _ 33 vectors vector NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 TPA TPA PROPN NNP Number=Sing _ _ _ _ 42 alone alone ADV RB _ _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 combination combination NOUN NN Number=Sing _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 580 # text = The ability of Jun proteins to cooperate with GR in T cells has been investigated after transfection of c-jun, jun-B, or jun-D expression vectors, which augmented GR-dependent transcription from either MMTV LTR or GRE. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 GR GR PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 D d NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 vectors vector NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 GR GR ADV RB _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 either either CCONJ CC _ _ _ _ _ 40 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 41 LTR LTR PROPN NNP Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 581 # text = Conversely, c-jun and jun-B transfection blunted GR-dependent transcription in HeLa cells. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 jun jun ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -B -b ADJ JJ Degree=Pos _ _ _ _ 8 transfection transfection NOUN NN Number=Sing _ _ _ _ 9 blunted blunt VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 GR GR ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 582 # text = The presence of c-fos had a negative influence on GR function and correlated with the cell-specific synergistic or antagonistic activity of Jun with respect to GR; high basal expression of c-fos as well as AP-1 DNA binding and transcriptional activity were observed in HeLa cells, but not in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 influence influence NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 GR Gr NOUN NN Number=Sing _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Jun Jun PROPN NNP Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 respect respect NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 basal basal NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 well well ADV RB Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 DNA dna NOUN NN Number=Sing _ _ _ _ 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activity activity NOUN NN Number=Sing _ _ _ _ 50 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 but but CCONJ CC _ _ _ _ _ 57 not not ADV RB _ _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 T t PROPN NNP Number=Sing _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 583 # text = Furthermore overexpression of exogenous c-fos has an inhibitory effect on GR-dependent transcription from GRE in T cells. 1 Furthermore furthermore ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fos fos NOUN NN Number=Sing _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 GRE GRE PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 584 # text = We propose that Jun plays a bifunctional role on GR-dependent transcriptional activation of GRE, selecting either synergistic or antagonistic activity depending on the cell-specific microenvironment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 bifunctional bifunctional ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 selecting selecte VERB VBG VerbForm=Ger _ _ _ _ 19 either either CCONJ CC _ _ _ _ _ 20 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 depending depend VERB VBG VerbForm=Ger _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 29 microenvironment microenvironment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 585 # text = In this regard, intracellular levels of c-fos appear to be influential. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 influential influential ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 586 # text = Document 00300251 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300251 00300251 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 587 # text = Effects of overexpression of IL-1 receptor-associated kinase on NFkappaB activation, IL-2 production and stress-activated protein kinases in the murine T cell line EL4. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 receptor- receptor- PUNCT : _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 murine murine PROPN NNP Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 line line NOUN NN Number=Sing _ _ _ _ 31 EL4 El4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 588 # text = The association and activation of the IL-1 receptor-associated protein kinase (IRAK) to the IL-1 receptor complex is one of the earliest events detectable in IL-1 signal transduction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 association association NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 one one NUM CD NumType=Card _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 30 events event NOUN NNS Number=Plur _ _ _ _ 31 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 signal signal NOUN NN Number=Sing _ _ _ _ 37 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 589 # text = We generated permanent clones of the murine T cell line EL4 6.1 overexpressing human (h)IRAK to evaluate the role of this kinase in IL-1 signaling. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 murine murine PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 EL4 EL4 NUM CD NumType=Card _ _ _ _ 12 6.1 6.1 NUM CD NumType=Card _ _ _ _ 13 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 h h INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 590 # text = Overexpression of hIRAK enhanced IL-1-stimulated activation of the transcription factor NFkappaB, whereas a truncated form (N-IRAK) specifically inhibited IL-1-dependent NFkappaB activity. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hIRAK hIRAK PROPN NNP Number=Sing _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 form form NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 specifically specifically ADV RB _ _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 591 # text = In clones stably overexpressing hIRAK a weak constitutive activation of NFkappaB correlated with a low basal IL-2 production which was enhanced in an IL-1-dependent manner. 1 In in ADP IN _ _ _ _ _ 2 clones clone NOUN NNS Number=Plur _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 5 hIRAK hIRAK PROPN NNP Number=Sing _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 weak weak ADJ JJ Degree=Pos _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 12 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 low low ADJ JJ Degree=Pos _ _ _ _ 16 basal basal NOUN NN Number=Sing _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 592 # text = Compared to the parental cell line the dose-response curve of IL-1-induced IL-2 production was shifted in both potency and efficacy. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 parental parental ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 response response NOUN NN Number=Sing _ _ _ _ 11 curve curve NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 shifted shift VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 potency potency NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 efficacy efficacy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 593 # text = These results demonstrate that IRAK directly triggers NFkappaB-mediated gene expression in EL4 cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EL4 EL4 PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 594 # text = Qualitatively different effects were observed for the IL-1-induced activation of stress-activated protein (SAP) kinases: permanent overexpression of IRAK did not affect the dose dependence but prolonged the kinetics of IL-1-induced activation of SAP kinases, suggesting that this signaling branch may be regulated by distinct mechanisms. 1 Qualitatively Qualitatively ADV RB _ _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 SAP sap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 25 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 affect affect VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 dose dose NOUN NN Number=Sing _ _ _ _ 33 dependence dependence NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 prolonged prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 SAP sap NOUN NN Number=Sing _ _ _ _ 47 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 50 that that SCONJ IN _ _ _ _ _ 51 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 52 signaling signaling NOUN NN Number=Sing _ _ _ _ 53 branch branch NOUN NN Number=Sing _ _ _ _ 54 may may AUX MD VerbForm=Fin _ _ _ _ 55 be be AUX VB VerbForm=Inf _ _ _ _ 56 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 59 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 595 # text = Document 00300252 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300252 00300252 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 596 # text = Inhibition of p105 processing by NF-kappaB proteins in transiently transfected cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 p105 p105 NUM CD NumType=Card _ _ _ _ 4 processing processing VERB VBG VerbForm=Ger _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transiently transiently ADV RB _ _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 597 # text = Regulation of the transcription factor NF-kappaB involves proteasome-mediated processing of the NF-kappaB1 p105 precursor protein, which generates the p50 subunit of NF-kappaB. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 processing processing NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB1 kappaB1 PROPN NNP Number=Sing _ _ _ _ 19 p105 p105 NOUN NN Number=Sing _ _ _ _ 20 precursor precursor NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ _ 27 subunit subunit NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 598 # text = The processing of p105 occurs constitutively in vivo but can be markedly enhanced by various cellular activation agents, although the underlying regulatory mechanism is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 processing processing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p105 p105 NUM CD NumType=Card _ _ _ _ 5 occurs occur NOUN NNS Number=Plur _ _ _ _ 6 constitutively constitutively ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 markedly markedly ADV RB _ _ _ _ _ 13 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 although although SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 yet yet ADV RB _ _ _ _ _ 28 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 599 # text = In the present study, we demonstrate that signal-mediated induction of p105 processing in human T cells is associated with de novo synthesis of this precursor protein. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p105 p105 NUM CD NumType=Card _ _ _ _ 15 processing processing NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 de de NOUN NN Number=Sing _ _ _ _ 24 novo novo NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 precursor precursor NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 600 # text = Transient transfection studies performed in COS7 cells revealed that the newly synthesized p105 protein appears to be more rapidly processed compared to its accumulated form that is already associated with the processed product p50. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 COS7 COS7 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 newly newly ADV RB _ _ _ _ _ 12 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 p105 p105 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 more more ADV RBR _ _ _ _ _ 19 rapidly rapidly ADV RB _ _ _ _ _ 20 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 already already ADV RB _ _ _ _ _ 29 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 product product NOUN NN Number=Sing _ _ _ _ 34 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 601 # text = Interestingly, the processing rate of p105 is markedly inhibited in cells co-transfected with p50 or other NF-kappaB subunits, including RelA and c-Rel, that physically interact with p105. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 processing processing VERB VBG VerbForm=Ger _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p105 p105 NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 RelA Rela NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 physically physically ADV RB _ _ _ _ _ 32 interact interact VERB VB VerbForm=Inf _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 602 # text = These findings suggest that the processing of p105 is subject to negative regulation by the various NF-kappaB subunits. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 processing processing NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p105 p105 NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 subject subject ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 20 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 603 # text = We further demonstrate that p105 undergoes degradation in lipopolysaccharide-stimulated human monocytic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 p105 p105 NUM CD NumType=Card _ _ _ _ 6 undergoes undergo NOUN NNS Number=Plur _ _ _ _ 7 degradation degradation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lipopolysaccharide-stimulated lipopolysaccharide-stimulated ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 604 # text = However, the inducible degradation of p105 is not coupled with the generation of p50. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p105 p105 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 coupled couple VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 generation generation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 605 # text = Together, these studies demonstrate that the processing and inducible degradation of p105 are differentially regulated. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 processing processing NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p105 p105 NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 differentially differentially ADV RB _ _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 606 # text = Document 00300253 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300253 00300253 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 607 # text = The role of jun and fos gene family members in 12-O-tetradecanoylphorbol-13-acetate induced hemopoietic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gene gene ADJ JJ Degree=Pos _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 12-O- 12-o- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 608 # text = Terminal differentiation of the leukemic cell lines U-937 and HL-60 by 12-O-tetradecanoylphorbol-13-acetate is accompanied by marked changes in gene expression. 1 Terminal Terminal NOUN NN Number=Sing _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 U- U- PUNCT : _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 12-O- 12-o- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 changes change NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 gene gene ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 609 # text = In this study, we demonstrate that the expression of jun and fos gene family members is induced with variable kinetics during 12-O-tetradecanoylphorbol-13-acetate induced differentiation, with c-jun expression best paralleling differentiation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 jun jun NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 variable variable ADJ JJ Degree=Pos _ _ _ _ 21 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 -acetate -acetate ADJ JJ Degree=Pos _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 jun jun NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 best best ADJ JJS Degree=Sup _ _ _ _ 34 paralleling paralleling NOUN NN Number=Sing _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 610 # text = The generation of AP-1 complexes, as measured by DNA binding activity, closely parallels morphological differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 closely closely ADV RB _ _ _ _ _ 17 parallels parallel NOUN NNS Number=Plur _ _ _ _ 18 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 611 # text = Furthermore, the ability of these complexes to regulate gene expression is demonstrated by increased transcription from an AP-1 driven reporter construct and marked increases in the expression of endogenous AP-1 regulated genes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 construct construct NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 increases increase NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 612 # text = Differentiation assays using water soluble phorbol esters reveal that differentiation becomes irreversible soon after AP-1 appears. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 water water NOUN NN Number=Sing _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 7 esters ester NOUN NNS Number=Plur _ _ _ _ 8 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 irreversible irreversible ADJ JJ Degree=Pos _ _ _ _ 13 soon soon ADV RB Degree=Pos _ _ _ _ 14 after after SCONJ IN _ _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 613 # text = This tight correlation between c-jun expression, the generation of AP-1 activity, and differentiation suggests a critical role for this gene and transcriptional complex during this process. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 tight tight ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 generation generation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 614 # text = Document 00300254 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300254 00300254 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 615 # text = Calcineurin activates transcription from the GM-CSF promoter in synergy with either protein kinase C or NF-kappa B/AP-1 in T cells. 1 Calcineurin Calcineurin PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 synergy synergy NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c PROPN NNP Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 /AP /ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 616 # text = Two cis-acting elements GM-kappa B/GC-box and CLE0, of the granulocyte-macrophage colony-stimulating factor (GM-CSF) gene are required for maximal induction in Jurkat T cells by costimulation with phorbol-12-myristate acetate (PMA) and Ca2+ ionophore (A23187). 1 Two two NUM CD NumType=Card _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 acting acte VERB VBG VerbForm=Ger _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B/GC B/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 box box NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 gene gene PRON NN Number=Sing _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 myristate myristate NOUN NN Number=Sing _ _ _ _ 47 acetate acetate NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 + + SYM SYM _ _ _ _ _ 54 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 617 # text = The GM-kappa B sequence is recognized by NF-kappa B, which is mainly induced by PMA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM gm NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mainly mainly ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 618 # text = The CLE0 sequence interacts with factors, related to a PMA-induced AP-1 and a PMA/A23187-induced NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 interacts interact NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 PMA/A23187 PMA/A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 619 # text = We examined whether signal transducing components in T cells can activate transcription of the GM-CSF gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 6 components component NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 620 # text = Cotransfection of NF-kappa B (p50/p65)- or AP-1 (c-Jun/c-Fos)- expression vectors into Jurkat cells with a luciferase reporter containing the GM-CSF promoter did not stimulate transcription from the GM-CSF promoter. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 9 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 )- )- PUNCT . _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 Jun/c Jun/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 vectors vector NOUN NNS Number=Plur _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 30 reporter reporter NOUN NN Number=Sing _ _ _ _ 31 containing contain VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CSF CSF PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 CSF CSF PROPN NNP Number=Sing _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 621 # text = In contrast, cotransfection with a combination of NF-kappa B and AP-1 significantly augmented transcription from the GM-CSF promoter containing the GM-kappa B/GC-box and the CLE0 (AP-1/NF-AT). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 combination combination NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 CSF CSF PROPN NNP Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B/GC B/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 box box NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 CLE0 CLE0 NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1/NF 1/nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 AT At NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 622 # text = Expression of a constitutively active calcineurin (CN), a Ca2+/calmodulin-dependent protein phosphatase, potentiated by two fold the transcriptional activation by NF-kappa B/AP-1. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CN CN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 fold fold NOUN NN Number=Sing _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 623 # text = Both constitutively active forms of CN and protein kinase C (PKC) synergistically activated transcription from the GM-CSF promoter. 1 Both both DET DT _ _ _ _ _ 2 constitutively constitutively ADV RB _ _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ _ 4 forms form NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 synergistically synergistically ADV RB _ _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF PROPN NNP Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 624 # text = These results suggest that cooperation among NF-kappa B-, AP-1- and NF-AT-binding sequences is required for induction of the GM-CSF gene through PKC- and Ca2+- signaling pathways downstream of T cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 6 among among ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 AT at NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 CSF CSF PROPN NNP Number=Sing _ _ _ _ 33 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 through through ADP IN _ _ _ _ _ 35 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 +- +- PUNCT , _ _ _ _ _ 40 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 41 pathways pathways NOUN NNS Number=Plur _ _ _ _ 42 downstream downstream NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 625 # text = Document 00300255 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300255 00300255 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 626 # text = Stimulation of CD40 on immunogenic human malignant melanomas augments their cytotoxic T lymphocyte-mediated lysis and induces apoptosis. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 8 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 9 augments augment NOUN NNS Number=Plur _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 lysis lysis NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 627 # text = Here, we report the functional expression of CD40 on human malignant melanomas (MMs). 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD40 CD40 NUM CD NumType=Card _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 13 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 MMs Mms PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 628 # text = Comparison of tumor specimen from MM precursor lesions, primary tumors, and metastases revealed that CD40 surface expression is down-regulated during tumor progression. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 specimen speciman NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 MM mm NUM CD NumType=Card _ _ _ _ 7 precursor precursor NOUN NN Number=Sing _ _ _ _ 8 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 metastases metastase NOUN NNS Number=Plur _ _ _ _ 15 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 down down ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 629 # text = CD40 expression was confirmed in 7 human MM cell lines established from immunogenic primary tumors or metastases, whereas 11 cell lines established from advanced stages were CD40 negative. 1 CD40 CD40 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 7 7 NUM CD NumType=Card _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 MM mm NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 tumors tumor NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 metastases metastase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 11 11 NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ _ 23 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 26 stages stage NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 29 negative negative NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 630 # text = CD40 expression could be enhanced in CD40-positive MM by stimulation with IFN-gamma and tumor necrosis factor-alpha but not by interleukin (IL)-1beta or CD40 triggering. 1 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 could could AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 MM mm PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 35 triggering triggering VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 631 # text = CD40 ligation on MM by CD40L-transfected murine L-cells or by a soluble CD40L fusion protein up-regulated their expression of intercellular adhesion molecule-1 and MHC class I and class II molecules and their secretion of IL-6, IL-8, tumor necrosis factor-a, and granulocyte macrophage colony-stimulating factor and also induced a rapid activation of the transcription factor nuclear factor kappaB. 1 CD40 CD40 NUM CD NumType=Card _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 MM mm PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 CD40L CD40L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 murine murine PRON PRP _ _ _ _ _ 10 L- L- SYM NFP _ _ _ _ SpaceAfter=No 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 16 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 17 fusion fusion NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 up up ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 MHC MHC PROPN NNP Number=Sing _ _ _ _ 32 class class NOUN NN Number=Sing _ _ _ _ 33 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 class class NOUN NN Number=Sing _ _ _ _ 36 II ii NUM CD NumType=Card _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 secretion secretion NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 tumor tumor NOUN NN Number=Sing _ _ _ _ 51 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 58 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 59 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 -stimulating -stimulat VERB VBG VerbForm=Ger _ _ _ _ 61 factor factor NOUN NN Number=Sing _ _ _ _ 62 and and CCONJ CC _ _ _ _ _ 63 also also ADV RB _ _ _ _ _ 64 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 66 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 67 activation activation NOUN NN Number=Sing _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 the the DET DT Definite=Def|PronType=Art _ _ _ _ 70 transcription transcription NOUN NN Number=Sing _ _ _ _ 71 factor factor NOUN NN Number=Sing _ _ _ _ 72 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 73 factor factor NOUN NN Number=Sing _ _ _ _ 74 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 632 # text = Furthermore, CD40 ligation of a HLA-A2+, MelanA/MART1+ 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 NUM CD NumType=Card _ _ _ _ 4 ligation ligation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 A2+ a2+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 MelanA MelanA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 MART1 MART1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 + + SYM NFP _ _ _ _ _ # sent_id = 633 # text = MM cell line enhanced its susceptibility to specific lysis by a HLA-A2-restricted, MelanA/MART-1-specific CTL clone. 1 MM mm NUM CD NumType=Card _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 line line NOUN NN Number=Sing _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 lysis lysis NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 A2 a2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 MelanA/MART MelanA/MART PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 CTL Ctl NOUN NN Number=Sing _ _ _ _ 24 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 634 # text = Finally, CD40 ligation induced growth inhibition and apoptosis in MM. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 NUM CD NumType=Card _ _ _ _ 4 ligation ligation NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 635 # text = These results indicate that CD40-CD40L interactions may play an important role in augmenting antitumor immunity and inducing apoptosis in some CD40-positive immunogenic human MMs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD40-CD40L Cd40-cd40l ADJ JJ Degree=Pos _ _ _ _ 6 interactions interaction NOUN NNS Number=Plur _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 14 antitumor antitumor NOUN NN Number=Sing _ _ _ _ 15 immunity immunity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 some some DET DT _ _ _ _ _ 21 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 positive positive ADJ JJ Degree=Pos _ _ _ _ 24 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 MMs MM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 636 # text = Document 00300256 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300256 00300256 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 637 # text = Involvement of adenylate cyclase and p70(S6)-kinase activation in IL-10 up-regulation in human monocytes by gp41 envelope protein of human immunodeficiency virus type 1. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 4 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 S6 S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 gp41 gp41 NUM CD NumType=Card _ _ _ _ 25 envelope envelope NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 type type NOUN NN Number=Sing _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 638 # text = Our previous results show that recombinant gp41 (aa565-647), the extracellular domain of HIV-1 transmembrane glycoprotein, stimulates interleukin-10 (IL-10) production in human monocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 gp41 gp41 NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 aa565- aa565- SYM SYM _ _ _ _ SpaceAfter=No 10 647 647 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 21 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 24 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 -10 -10 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 639 # text = The signal cascade transducing this effect is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 cascade cascade NOUN NN Number=Sing _ _ _ _ 4 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 yet yet ADV RB _ _ _ _ _ 10 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 640 # text = In this study, we examined whether gp41-induced IL-10 up-regulation is mediated by the previously described synergistic activation of cAMP and NF-kappaB pathways. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 gp41 gp41 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 previously previously ADV RB _ _ _ _ _ 22 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cAMP camp PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 641 # text = gp41 induced cAMP accumulation in monocytes in a time- and concentration-dependent manner and the adenylate cyclase inhibitor SQ 22536 suppressed gp41-induced IL-10 production in monocytes. 1 gp41 gp41 X LS _ _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cAMP camp NOUN NN Number=Sing _ _ _ _ 4 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 19 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 SQ sq NOUN NN Number=Sing _ _ _ _ 22 22536 22536 NUM CD NumType=Card _ _ _ _ 23 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 gp41 gp41 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 642 # text = In contrast, gp41 failed to stimulate NF-kappaB binding activity in as much as no NF-kappaB bound to the main NF-kappaB-binding site 2 of the IL-10 promoter after addition of gp41. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 gp41 gp41 NUM CD NumType=Card _ _ _ _ 5 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 much much ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 main main ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 2 2 NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 after after ADP IN _ _ _ _ _ 38 addition addition NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 gp41 gp41 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 643 # text = We also examined the involvement of other signal transduction pathways. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transduction transduction NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 644 # text = Specific inhibitors of p70(S6)-kinase (rapamycin), and Gi protein (pertussis toxin), prevented induction of IL-10 production by gp41 in monocytes, while inhibitors of the phosphatidylinositol 3-kinase (PI 3-kinase) (wortmannin) and mitogen-activated protein kinase (MAPK) pathway (PD 98059) did not. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 S6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Gi gi PROPN NNP Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 pertussis pertussis NOUN NN Number=Sing _ _ _ _ 19 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 10 10 NUM CD NumType=Card _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 gp41 gp41 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 while while SCONJ IN _ _ _ _ _ 35 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 39 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 kinase kinase NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PI Pi NUM CD NumType=Card _ _ _ _ 44 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 wortmannin wortmannin NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 protein protein NOUN NN Number=Sing _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 pathway pathway NOUN NN Number=Sing _ _ _ _ 61 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 62 PD P NOUN NN Number=Sing _ _ _ _ 63 98059 98059 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 66 not not PART RB _ _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 645 # text = Thus HIV-1 gp41-induced IL-10 up-regulation in monocytes may not involve NF-kappaB, MAPK, or PI 3-kinase activation, but rather may operate through activation of adenylate cyclase and pertussis-toxin-sensitive Gi/Go protein to effect p70(S6)-kinase activation. 1 Thus thus PROPN NNP Number=Sing _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gp41 gp41 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 involve involve VERB VB VerbForm=Inf _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 PI PI PROPN NNP Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 rather rather ADV RB _ _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 operate operate VERB VB VerbForm=Inf _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 39 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 pertussis- pertussis- SYM NFP _ _ _ _ SpaceAfter=No 42 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 45 Gi gi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 / / PUNCT , _ _ _ _ SpaceAfter=No 47 Go go PROPN NNP Number=Sing _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 effect effect NOUN NN Number=Sing _ _ _ _ 51 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 S6 S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 646 # text = Document 00300257 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300257 00300257 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 647 # text = Characterization of a cofactor that regulates dimerization of a mammalian homeodomain protein. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 11 homeodomain homeodomain NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 648 # text = Dimerization among transcription factors has become a recurrent theme in the regulation of eukaryotic gene expression. 1 Dimerization Dimerization NOUN NN Number=Sing _ _ _ _ 2 among among ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 recurrent recurrent ADJ JJ Degree=Pos _ _ _ _ 9 theme theme NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 649 # text = Hepatocyte nuclear factor-1 alpha (HNF-1 alpha) is a homeodomain-containing protein that functions as a dimer. 1 Hepatocyte Hepatocyte ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 homeodomain homeodomain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 containing contain VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 dimer dimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 650 # text = A dimerization cofactor of HNF-1 alpha (DCoH) was identified that displayed a restricted tissue distribution and did not bind to DNA, but, rather, selectively stabilized HNF-1 alpha dimers. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 3 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 DCoH DCoH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 tissue tissue NOUN NN Number=Sing _ _ _ _ 19 distribution distribution NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 bind bind VERB VB VerbForm=Inf _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 rather rather ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 selectively selectively ADV RB _ _ _ _ _ 32 stabilized stabilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 651 # text = The formation of a stable tetrameric DCoH-HNF-1 alpha complex, which required the dimerization domain of HNF-1 alpha, did not change the DNA binding characteristics of HNF-1 alpha, but enhanced its transcriptional activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 stable stable ADJ JJ Degree=Pos _ _ _ _ 6 tetrameric tetrameric NOUN NN Number=Sing _ _ _ _ 7 DCoH DCoH NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 change change VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 652 # text = However, DCoH did not confer transcriptional activation to the GAL4 DNA binding domain. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 DCoH DCoH PROPN NNP Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 confer confer VERB VB VerbForm=Inf _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 GAL4 Gal4 NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 653 # text = These results indicate that DCoH regulates formation of transcriptionally active tetrameric complexes and may contribute to the developmental specificity of the complex. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DCoH DCoH PROPN NNP Number=Sing _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 formation formation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ _ 11 tetrameric tetrameric ADJ JJ Degree=Pos _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 19 specificity specificity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 654 # text = Document 00300258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300258 00300258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 655 # text = Inhibitory effect of E3330, a novel quinone derivative able to suppress tumor necrosis factor-alpha generation, on activation of nuclear factor-kappa B. (2E)-3-[5-(2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2- propenoic acid (E3330), is a novel agent with hepatoprotective activity. 1 Inhibitory Inhibitory ADJ JJ Degree=Pos _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 E3330 E3330 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 quinone quinone NOUN NN Number=Sing _ _ _ _ 9 derivative derivative NOUN NN Number=Sing _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor-kappa factor-kappa NOUN NN Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 2E 2E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT : _ _ _ _ SpaceAfter=No 30 3-[ 3-[ PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 5-( 5-( SYM NFP _ _ _ _ SpaceAfter=No 32 2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2 2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ _ 34 propenoic propenoic ADJ JJ Degree=Pos _ _ _ _ 35 acid acid NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 E3330 E3330 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 novel novel NOUN NN Number=Sing _ _ _ _ 43 agent agent NOUN NN Number=Sing _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 hepatoprotective hepatoprotective ADJ JJ Degree=Pos _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 656 # text = We report the effect of E3330 on transcriptional activation of tumor necrosis factor (TNF)-alpha gene and on nuclear factor (NF)-kappa B activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 E3330 E3330 NUM CD NumType=Card _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 657 # text = Nuclear run-on experiments showed that E3330 decreases transcriptional activation of TNF-alpha gene induced by lipopolysaccharide (LPS) stimulation in human peripheral monocytes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 9 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 658 # text = To investigate the inhibitory mechanisms, we constructed a secreted-type placental alkaline phosphatase (PLAP) reporter gene whose transcription is controlled by a 1.4-kb human TNF-alpha promoter. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 constructed construct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 type type NOUN NN Number=Sing _ _ _ _ 13 placental placental NOUN NN Number=Sing _ _ _ _ 14 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 15 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PLAP PLAP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 1.4 1.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kb kb NOUN NN Number=Sing _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 659 # text = A stable transformant of the PLAP reporter gene derived from human monocytic cell line showed very little activity on the promoter before stimulation, whereas LPS stimulation led to a dramatic increase in PLAP activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 stable stable ADJ JJ Degree=Pos _ _ _ _ 3 transformant transformant NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PLAP PLAP PROPN NNP Number=Sing _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 very very ADV RB _ _ _ _ _ 17 little little ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 before before ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 32 increase increase NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 PLAP Plap NOUN NN Number=Sing _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 660 # text = E3330 inhibited this induced promoter activity in a dose-dependent manner. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 661 # text = There are four putative NF-kappa B binding sites (kappa B-1, kappa B-2, kappa B-3, kappa B-4) in human TNF-alpha promoter. 1 There there PRON EX _ _ _ _ _ 2 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 four four NUM CD NumType=Card _ _ _ _ 4 putative putative ADJ JJ Degree=Pos _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 662 # text = By using mutated promoter-PLAP plasmids, we established that these NF-kappa B sites were necessary for induction of TNF-alpha transcription on stimulation with LPS. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 PLAP pLAp NOUN NN Number=Sing _ _ _ _ 7 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 663 # text = A gel retardation experiment with synthetic double-stranded oligonucleotides showed that activated NF-kappa B consisting of p50/p65 heterodimer bound to all four putative NF-kappa B DNA probes, suggesting that all four putative NF-kappa B recognition sites play an important role in inducible TNF-alpha expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 retardation retardation NOUN NN Number=Sing _ _ _ _ 4 experiment experiment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 24 bound bound ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 all all DET DT _ _ _ _ _ 27 four four NUM CD NumType=Card _ _ _ _ 28 putative putative ADJ JJ Degree=Pos _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 probes probe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 all all DET DT _ _ _ _ _ 39 four four NUM CD NumType=Card _ _ _ _ 40 putative putative ADJ JJ Degree=Pos _ _ _ _ 41 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 recognition recognition NOUN NN Number=Sing _ _ _ _ 46 sites site NOUN NNS Number=Plur _ _ _ _ 47 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 important important ADJ JJ Degree=Pos _ _ _ _ 50 role role NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 53 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 alpha alpha NOUN NN Number=Sing _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 664 # text = E3330 decreased activated NF-kappa B in nuclei, suggesting that E3330 inhibits NF-kappa B activation and/or translocation of the nuclei. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 14 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 or or CCONJ CC _ _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 665 # text = Western blotting analysis with anti-I kappa B-alpha antibody indicated that E3330 inhibited degradation of I kappa B-alpha, which is an inhibitory protein of NF-kappa B, in LPS-stimulated monocytes. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blott NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anti anti X AFX _ _ _ _ SpaceAfter=No 6 -I -i X AFX _ _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B- B- X GW _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 antibody antibody PRON NN Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 14 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 degradation degradation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 666 # text = E3330 may suppress the production of active oxygen species serving as common messengers to activate NF-kappa B. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 9 species species NOUN NNS Number=Plur _ _ _ _ 10 serving serve VERB VBG VerbForm=Ger _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 messengers messenger NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 activate activate VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 667 # text = Document 00300259 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300259 00300259 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 668 # text = Activation of the interleukin 6 gene by Mycobacterium tuberculosis or lipopolysaccharide is mediated by nuclear factors NF-IL6 and NF-kappa B [published erratum appears in Proc Natl Acad Sci U S A 1995 Apr 11;92(8):3632] 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 5 6 6 NUM CD NumType=Card _ _ _ _ 6 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 9 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 erratum erratum NOUN NN Number=Sing _ _ _ _ 28 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Proc Proc PROPN NNP Number=Sing _ _ _ _ 31 Natl Natl PROPN NNP Number=Sing _ _ _ _ 32 Acad Acad PROPN NNP Number=Sing _ _ _ _ 33 Sci sci PROPN NNP Number=Sing _ _ _ _ 34 U U PROPN NNP Number=Sing _ _ _ _ 35 S be PART POS _ _ _ _ _ 36 A a PROPN NNP Number=Sing _ _ _ _ 37 1995 1995 NUM CD NumType=Card _ _ _ _ 38 Apr Apr PROPN NNP Number=Sing _ _ _ _ 39 11;92 11;92 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 8):3632 8):3632 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 669 # text = The host response to Mycobacterium tuberculosis includes granuloma formation at sites of infection and systemic symptoms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 host host NOUN NN Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 6 tuberculosis tuberculosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 granuloma granuloma NOUN NN Number=Sing _ _ _ _ 9 formation formation NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 16 symptoms symptom NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 670 # text = Cytokines have been identified by immunohistochemistry in granulomas in animal models of bacillus Calmette-Guerin (BCG) infection and are released by mononuclear phagocytes upon stimulation by mycobacterial proteins. 1 Cytokines Cytokine NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 granulomas granuloma NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 animal animal NOUN NN Number=Sing _ _ _ _ 11 models model NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 bacillus bacillus ADJ JJ Degree=Pos _ _ _ _ 14 Calmette Calmette PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Guerin Guerin PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 BCG BCG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 infection infection NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 released release VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 26 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 27 upon upon ADP IN _ _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 671 # text = In this regard, the cytokine interleukin 6 (IL-6) may play a role in the clinical manifestations and pathological events of tuberculosis infection. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 21 manifestations manifestation NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 tuberculosis tuberculosis DET DT Number=Sing|PronType=Dem _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 672 # text = We have demonstrated that lipoarabinomannan (LAM) from the mycobacterial cell wall, which was virtually devoid of lipopolysaccharide (LPS), stimulated mononuclear phagocytes to release IL-6 in a dose-response manner. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LAM LAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 wall wall NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 virtually virtually ADV RB _ _ _ _ _ 18 devoid devoid ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 27 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 release release VERB VB VerbForm=Inf _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 response response NOUN NN Number=Sing _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 673 # text = LAM and LPS were potent inducers of IL-6 gene expression in peripheral blood monocytes. 1 LAM LAM PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 potent potent ADJ JJ Degree=Pos _ _ _ _ 6 inducers inducer NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 674 # text = Both LAM- and LPS-inducible IL-6 promoter activity was localized to a DNA fragment, positions -158 to -49, by deletion analysis and chloramphenicol acetyltransferase assay. 1 Both both DET DT _ _ _ _ _ 2 LAM LAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 positions position NOUN NNS Number=Plur _ _ _ _ 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 158 158 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 49 49 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 deletion deletion NOUN NN Number=Sing _ _ _ _ 29 analysis analysis NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 32 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 33 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 675 # text = Two nuclear factor NF-IL6 (positions -153 to -145 and -83 to -75) and one nuclear factor NF-kappa B (positions -72 to -63) motifs are present within this fragment. 1 Two two NUM CD NumType=Card _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 positions position NOUN NNS Number=Plur _ _ _ _ 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 153 153 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 145 145 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 83 83 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 positions position NOUN NNS Number=Plur _ _ _ _ 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 72 72 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 motifs motif NOUN NNS Number=Plur _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 present present ADJ JJ Degree=Pos _ _ _ _ 40 within within ADP IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 676 # text = Site-directed mutagenesis of one or more of these motifs within the IL-6 promoter demonstrated that each has positive regulatory activity and that they could act in a function- and orientation-independent manner. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 more more ADJ JJR Degree=Cmp _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 motifs motif NOUN NNS Number=Plur _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 each each DET DT _ _ _ _ _ 21 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 act act VERB VB VerbForm=Inf _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 independent independent ADJ JJ Degree=Pos _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 677 # text = Deletion of all three elements abolished inducibility of IL-6 promoter activity by both LAM and LPS. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 LAM LAm PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 678 # text = We conclude that the NF-IL6 and NF-kappa B sites mediate IL-6 induction in response to both LPS and LAM, acting as bacterial or mycobacterial response elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 LPS Lp NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 LAM LAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 acting act VERB VBG VerbForm=Ger _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 679 # text = Document 00300260 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300260 00300260 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 680 # text = The class II trans-activator CIITA interacts with the TBP-associated factor TAFII32. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 8 interacts interact NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 TAFII32 Tafii32 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 681 # text = The class II trans- activator (CIITA) is the main transcriptional co-activator for the expression of MHC class II proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 main main ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 co-activator co-activator NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 MHC MHC PROPN NNP Number=Sing _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 682 # text = Its N-terminal 125 amino acids function as an independent transcriptional activation domain. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 N- N- SYM NFP _ _ _ _ SpaceAfter=No 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 125 125 NUM CD NumType=Card _ _ _ _ 5 amino amino ADJ JJ Degree=Pos _ _ _ _ 6 acids acids NOUN NNS Number=Plur _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 683 # text = Analyses of the primary amino acid sequence of the activation domain predict the presence of three alpha-helices, each with a high proportion of acidic residues. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 amino amino X GW _ _ _ _ _ 6 acid acid ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 predict predict VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 helices helice NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 each each DET DT _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 high high ADJ JJ Degree=Pos _ _ _ _ 25 proportion proportion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 28 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 684 # text = Using site-directed mutagenesis, we found that two of these predicted alpha-helices are required for full transcriptional activation by CIITA. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 helices helice NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 full full ADJ JJ Degree=Pos _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 685 # text = Moreover, a CIITA protein in which both functional alpha-helices have been deleted displays a dominant negative phenotype. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 helices helice NOUN NNS Number=Plur _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 686 # text = This activation domain of CIITA interacts with the 32 kDa subunit of the general transcription complex TFIID, TAFII32. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 6 interacts interact NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 32 32 NUM CD NumType=Card _ _ _ _ 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 general general ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 TFIID tFIId NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 TAFII32 TAFII32 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 687 # text = Decreased transcriptional activation by N-terminal deletions of CIITA is correlated directly with their reduced binding to TAFII32. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 N- N- SYM NFP _ _ _ _ SpaceAfter=No 6 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 7 deletions deletion NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 directly directly ADV RB _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 TAFII32 Tafii32 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 688 # text = We conclude that interactions between TAFII32 and CIITA are responsible for activation of class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 interactions interaction NOUN NNS Number=Plur _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 TAFII32 Tafii32 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 689 # text = Document 00300261 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300261 00300261 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 690 # text = Transcriptional regulation of the interleukin-2 gene in normal human peripheral blood T cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 691 # text = Convergence of costimulatory signals and differences from transformed T cells. 1 Convergence Convergence NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 692 # text = To study transcriptional regulation in normal human T cells, we have optimized conditions for transient transfection. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 optimized optimize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 conditions condition NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 693 # text = Interleukin-2 (IL-2) promoter-reporter gene behavior closely parallels the endogenous gene in response to T cell receptor and costimulatory signals. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 behavior behavior NOUN NN Number=Sing _ _ _ _ 14 closely closely ADV RB _ _ _ _ _ 15 parallels parallel VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 T t VERB VB VerbForm=Inf _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 694 # text = As assessed with mutagenized promoters, the most important IL-2 cis-regulatory elements in normal T cells are the proximal AP-1 site and the NF- kappaB site. 1 As as SCONJ IN _ _ _ _ _ 2 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mutagenized mutagenize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 most most ADV RBS _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ _ 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 695 # text = Both primary activation, with phytohemagglutinin or antibodies to CD3, and costimulation, provided by pairs of CD2 antibodies or B7-positive (B cells) or B7-negative (endothelial) accessory cells, are mediated through the same cis-elements. 1 Both both DET DT _ _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 pairs pair NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 20 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 same same ADJ JJ Degree=Pos _ _ _ _ 44 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 696 # text = Interestingly, the nuclear factor of activated T cell sites are much less important in normal T cells than in Jurkat T cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 much much ADV RB _ _ _ _ _ 13 less less ADV RBR Degree=Cmp _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 697 # text = We conclude that IL-2 transcriptional regulation differs in tumor cell lines compared with normal T cells and that different costimulatory signals converge on the same cis-elements in the IL-2 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 differs differ NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 23 signals signal NOUN NNS Number=Plur _ _ _ _ 24 converge converge NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 same same ADJ JJ Degree=Pos _ _ _ _ 28 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 elements element NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 698 # text = Document 00300262 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300262 00300262 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 699 # text = Interleukin 10 induced c-fos expression in human B cells by activation of divergent protein kinases. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 10 10 NUM CD NumType=Card _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fos NOUN NNS Number=Plur _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 700 # text = IL-10 is a potent mediator of human B cell growth and plasma cell formation. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 mediator mediator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 plasma plasma NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 701 # text = However, signal transduction of IL-10 in B cells is poorly understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 transduction transduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 poorly poorly ADV RB _ _ _ _ _ 14 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 702 # text = In this study the effect of IL-10 on the expression of the protooncogene c-fos was investigated, because Fos plays a potential role in the regulation of B cell proliferation and differentiation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 16 c- c- PUNCT , _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 because because SCONJ IN _ _ _ _ _ 22 Fos Fos PROPN NNP Number=Sing _ _ _ _ 23 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 potential potential ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 703 # text = B cells were purified from buffy coat preparations of healthy blood donors by positive selection using an anti CD20 monoclonal antibody and a MiniMACS separation unit. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 buffy buffy NOUN NN Number=Sing _ _ _ _ 7 coat coat NOUN NN Number=Sing _ _ _ _ 8 preparations preparation NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 donors donor NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 selection selection NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 anti anti X AFX _ _ _ _ _ 19 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 20 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 21 antibody antibody NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 MiniMACS MiniMACS PROPN NNP Number=Sing _ _ _ _ 25 separation separation NOUN NN Number=Sing _ _ _ _ 26 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 704 # text = B cells were prestimulated with SAC for 48 hrs. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 prestimulated prestimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 SAC Sac PROPN NNP Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 48 48 NUM CD NumType=Card _ _ _ _ 9 hrs hr NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 705 # text = Then, cells were incubated with medium or IL-10 (100 ng/ml) for 10 to 120 min. 1 Then then ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 medium medium NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IL-10 IL-10 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 100 100 NUM CD NumType=Card _ _ _ _ 12 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 120 120 NUM CD NumType=Card _ _ _ _ 19 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 706 # text = RNA was extracted by phenol/chloroform and c-fos expression was analyzed by PCR assisted mRNA assay. 1 RNA RNa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 phenol phenol NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 chloroform chloroform NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fos NOUN NNS Number=Plur _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PCR PCR PROPN NNP Number=Sing _ _ _ _ 17 assisted assist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 707 # text = A significant 2-4 fold increase of c-fos expression was observed within 30 min of stimulation with IL-10 (p < 0.01). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 fold fold NOUN NN Number=Sing _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 30 30 NUM CD NumType=Card _ _ _ _ 17 min min NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 10 10 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 p p NOUN NN Number=Sing _ _ _ _ 26 < < PUNCT -LRB- _ _ _ _ _ 27 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 708 # text = After 2 hrs c-fos expression declined to basal levels. 1 After after ADP IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 hrs hr NOUN NNS Number=Plur _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 709 # text = The effect of IL-10 was dose-dependent with a maximum stimulation using 100 ng/ml of IL-10. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 maximum maximum NOUN NN Number=Sing _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 100 100 NUM CD NumType=Card _ _ _ _ 17 ng/ml ng/ml NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 710 # text = The IL-10 effect on c-fos expression was not blocked by polymyxin B. Using the tyrosine kinase inhibitor genistein (10 microM) a complete inhibition of IL-10 induced c-fos expression was observed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NNS Number=Plur _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 polymyxin polymyxin NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ 18 Using use VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 genistein genistein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 10 10 NUM CD NumType=Card _ _ _ _ 26 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 complete complete ADJ JJ Degree=Pos _ _ _ _ 30 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 10 10 NUM CD NumType=Card _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 711 # text = In addition, H-7 (10 microM), a specific inhibitor of serine/threonine kinases, significantly blocked IL-10 mediated c-fos expression (p < 0.05). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 7 7 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 threonine threonine NUM CD NumType=Card _ _ _ _ 19 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 10 10 NUM CD NumType=Card _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 fos fo NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 p p NOUN NN Number=Sing _ _ _ _ 33 < < PUNCT -LRB- _ _ _ _ _ 34 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 712 # text = In conclusion, these data show that IL-10 induces c-fos expression in human B-cells by activation of tyrosine and serine/threonine kinases. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 c- c- SYM SYM _ _ _ _ SpaceAfter=No 13 fos fo NOUN NNS Number=Plur _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 threonine threonine NUM CD NumType=Card _ _ _ _ 27 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 713 # text = Since this is the first report on IL-10 induced signal transduction, these data may help to identify the intracellular mechanisms by which IL-10 stimulates human B-cells. 1 Since since SCONJ IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 report report NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 data data NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 help help VERB VB VerbForm=Inf _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 identify identify VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 714 # text = Document 00300263 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300263 00300263 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 715 # text = GM-CSF and IL-2 share common control mechanisms in response to costimulatory signals in T cells. 1 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 CSF CSF PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 share share NOUN NN Number=Sing _ _ _ _ 9 common common ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 costimulatory costimulatory VERB VB VerbForm=Inf _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 716 # text = Antigen complexed with major histocompatibility complex class I or II molecules on the surface of antigen presenting cells interacts with the T cell receptor (TCR) on the surface of T cells and initiates an activation cascade. 1 Antigen Antigen PROPN NNP Number=Sing _ _ _ _ 2 complexed complex VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 antigen antigen NOUN NNS Number=Plur _ _ _ _ 17 presenting presenting VERB VBG VerbForm=Ger _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 interacts interact NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 717 # text = So called costimulatory signals, mediated by other cell surface interactions or soluble cytokines produced by antigen presenting cells, are also required for complete T cell activation. 1 So so ADV RB _ _ _ _ _ 2 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 18 presenting presenting ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 complete complete ADJ JJ Degree=Pos _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 718 # text = High levels of cytokine gene expression in T cells also required both TCR and costimulatory signals. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 TCR TCR NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 719 # text = The granulocyte-macrophage colony-stimulating factor requires sequences in the promoter as well as a powerful enhancer located 3kb upstream to respond to TCR-like signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 5 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 sequences sequence NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 kb kb NOUN NN Number=Sing _ _ _ _ 23 upstream upstream NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 respond respond VERB VB VerbForm=Inf _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 like like ADP IN _ _ _ _ _ 30 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 720 # text = These promoter and enhancer regions are mainly activated by the transcription factor nuclear factor of activated T cells (NFAT). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mainly mainly ADV RB _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 721 # text = The activation of NFAT by TCR signals has been well described for interleukin-2 (IL-2) and IL-4 gene transcription in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 TCR TCR PROPN NNP Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ _ 11 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 722 # text = Costimulatory signals, such as activation of the CD28 cell surface molecule on T cells, lead to activation through a distinct region of the granulocyte-macrophage colony-stimulating factor (GM-CSF) promoter. 1 Costimulatory Costimulatory ADJ JJ Degree=Pos _ _ _ _ 2 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 lead lead VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 29 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 723 # text = This region is termed the CK-1 or CD28RE and appears to bind specific members of the NF-kappa B family of transcription factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 bind bind VERB VB VerbForm=Inf _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 724 # text = Human T leukemia virus type 1 (HTLV-1) infects T cells and can lead to increase GM-CSF expression. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 lead lead VERB VB VerbForm=Inf _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 725 # text = We have found that the HTLV-1 transactivator protein, tax, acts as a costimulatory signal for GM-CSF and IL-2 gene transcription, in that it can cooperate with TCR signals to mediate high level gene expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in SCONJ IN _ _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 TCR Tcr NOUN NN Number=Sing _ _ _ _ 37 signals signal NOUN NNS Number=Plur _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 40 high high ADJ JJ Degree=Pos _ _ _ _ 41 level level NOUN NN Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 726 # text = Tax activates the GM-CSF promoter through the CK-1/CD28RE region and also activates nuclear factor-kappa B binding to this region. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1/CD28RE 1/CD28RE NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 727 # text = However, other transcription factors or coactivators of NF-kappa B are required for tax activation but these remain to be identified. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 coactivators coactivator NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 tax tax NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 728 # text = The CK-1/CD28RE of GM-CSF shows a high degree of similarity to the IL-2 CD28RE and the IL-3 gene also contains a related region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1/CD28RE 1/CD28RE NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 degree degree NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 similarity similarity NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 also also ADV RB _ _ _ _ _ 28 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 related related ADJ JJ Degree=Pos _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 729 # text = This observation, together with the fact that both GM-CSF and IL-2 respond to TCR signals via NFAT, implies a high degree of conservation in the regulation of cytokine gene expression in T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 together together ADV RB _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 respond respond NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 TCR TCR VERB VB VerbForm=Inf _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 degree degree NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 conservation conservation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 730 # text = Document 00300264 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300264 00300264 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 731 # text = IL-7 reconstitutes multiple aspects of v-Abl-mediated signaling. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 reconstitutes reconstitute NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 aspects aspect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Abl Abl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 732 # text = The mechanism by which early lymphoid cells are selectively transformed by v-Abl is currently unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 Abl Abl PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 currently currently ADV RB _ _ _ _ _ 17 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 733 # text = Previous studies have shown constitutive activation of IL-4 and IL-7 signaling pathways, as measured by activation of Janus protein kinase (JAK)1, JAK3, STAT5, and STAT6, in pre-B cells transformed by v-Abl. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 7 7 NUM CD NumType=Card _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Janus Janus PROPN NNP Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 JAK3 JAK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 pre pre X AFX _ _ _ _ SpaceAfter=No 40 -B -b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 Abl Abl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 734 # text = To determine whether activation of these cytokine signaling pathways by v-Abl is important in the cellular events induced by the Abelson murine leukemia virus, the effects of IL-4 and IL-7 on pre-B cells transformed with a temperature-sensitive v-Abl mutant were examined. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 Abl Abl PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 events event NOUN NNS Number=Plur _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Abelson Abelson PROPN NNP Number=Sing _ _ _ _ 24 murine murine NOUN NN Number=Sing _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 7 7 NUM CD NumType=Card _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 pre pre X AFX _ _ _ _ SpaceAfter=No 40 -B -b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 temperature temperature NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 48 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ SpaceAfter=No 50 Abl Abl PROPN NNP Number=Sing _ _ _ _ 51 mutant mutant NOUN NN Number=Sing _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 735 # text = Whereas IL-4 had little or no effect, IL-7 delayed both the apoptosis and cell cycle arrest that occur upon v-Abl kinase inactivation. 1 Whereas whereas PROPN NNP Number=Sing _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 little little ADJ JJ Degree=Pos _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 7 7 NUM CD NumType=Card _ _ _ _ 14 delayed delay ADJ JJ Degree=Pos _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ _ 21 arrest arrest NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Abl Abl NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 736 # text = IL-7 also delayed the decreases in the levels of c-Myc, Bcl-2, and Bcl-xL that occur upon loss of v-Abl kinase activity. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 delayed delay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 decreases decrease NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Myc Myc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 xL xL AUX MD VerbForm=Fin _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 occur occur VERB VB VerbForm=Inf _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 loss loss NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Abl Abl NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 737 # text = IL-7 did not maintain v-Abl-mediated differentiation arrest of the pre-B cells, as activation of NF-kappaB and RAG gene transcription was unaffected by IL-7. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 7 v- v- SYM NFP _ _ _ _ SpaceAfter=No 8 Abl Abl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 arrest arrest NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pre pre X AFX _ _ _ _ SpaceAfter=No 16 -B -b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 RAG RAG PROPN NNP Number=Sing _ _ _ _ 27 gene gene PROPN NNP Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 738 # text = These results identify a potential role for IL-7 signaling pathways in transformation by v-Abl while demonstrating that a combination of IL-4 and IL-7 signaling cannot substitute for an active v-Abl kinase in transformed pre-B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 7 7 NUM CD NumType=Card _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transformation transformation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Abl Abl NOUN NN Number=Sing _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 combination combination NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 signaling signaling NOUN NN Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 34 not not PART RB _ _ _ _ _ 35 substitute substitute VERB VB VerbForm=Inf _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 active active ADJ JJ Degree=Pos _ _ _ _ 39 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Abl Abl NOUN NN Number=Sing _ _ _ _ 42 kinase kinase NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 pre pre X AFX _ _ _ _ SpaceAfter=No 46 -B -b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 739 # text = Document 00300265 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300265 00300265 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 740 # text = Constitutive activation of NF-kappaB in primary adult T-cell leukemia cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 741 # text = Human T-cell leukemia virus type I (HTLV-I) is an etiologic agent of adult T-cell leukemia (ATL). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 742 # text = The viral protein Tax induces the activation and nuclear translocalization of transcription factor NF-kappaB, which is proposed to play a crucial role in the transformation of T cells by HTLV-I. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocalization translocalization NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transformation transformation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 743 # text = However, the HTLV-I genes including Tax are not expressed significantly in primary leukemic cells from ATL patients. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 744 # text = In this study, we examined the basis for NF-kappaB activation in freshly isolated leukemic cells from ATL patients. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 basis basis NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 freshly freshly ADV RB _ _ _ _ _ 16 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 ATL ATL PROPN NNP Number=Sing _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 745 # text = We found that leukemic cells from ATL patients, like HTLV-I-infected T-cell lines, display constitutive NF-kappaB DNA binding activity and increased degradation of IkappaBalpha (an inhibitor of NF-kappaB). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 ATL ATL ADJ JJ Degree=Pos _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 like like ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I- I- PUNCT : _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 display display NOUN NN Number=Sing _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 746 # text = Whereas the NF-kappaB binding activity in Tax-expressing T-cell lines consisted mostly of p50/c-Rel, fresh ATL samples contained p50/p50 and p50/p65 heterodimers. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mostly mostly ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p50/c p50/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 23 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 24 samples sample NOUN NNS Number=Plur _ _ _ _ 25 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 p50/p50 p50/p50 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 / / SYM SYM _ _ _ _ SpaceAfter=No 30 p65 p65 NUM CD NumType=Card _ _ _ _ 31 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 747 # text = One T-cell line derived from ATL leukemic cells, TL-Om1, displayed constitutive NF-kappaB activity, as well as enhanced degradation of IkappaBalpha, despite the lack of detectable Tax expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 ATL ATL PROPN NNP Number=Sing _ _ _ _ 8 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TL TL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Om1 Om1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 despite despite ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 lack lack NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 35 Tax tax NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 748 # text = Interestingly, the NF-kappaB in TL-Om1 consists of p50/p50 and p50/p65 like that in fresh primary leukemic cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 TL TL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 Om1 Om1 NUM CD NumType=Card _ _ _ _ 11 consists consist NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50/ p50/ SYM NFP _ _ _ _ SpaceAfter=No 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 / / SYM SYM _ _ _ _ SpaceAfter=No 18 p65 p65 NUM CD NumType=Card _ _ _ _ 19 like like ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 23 primary primary ADJ JJ Degree=Pos _ _ _ _ 24 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 749 # text = Our results suggest that activation of NF-kappaB occurs through a Tax-independent mechanism in leukemic cells of ATL patients, possibly due to differential NF-kappaB subunit activation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 occurs occur NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 possibly possibly ADV RB _ _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 differential differential ADJ JJ Degree=Pos _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 subunit subunit NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 750 # text = Document 00300266 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300266 00300266 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 751 # text = Ligand-dependent repression of the erythroid transcription factor GATA-1 by the estrogen receptor. 1 Ligand Ligand ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 estrogen estrogen ADJ JJ Degree=Pos _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 752 # text = High-dose estrogen administration induces anemia in mammals. 1 High high INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 dose dose VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 estrogen estrogen NUM CD NumType=Card _ _ _ _ 5 administration administration NOUN NN Number=Sing _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 anemia anemion NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mammals mammal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 753 # text = In chickens, estrogens stimulate outgrowth of bone marrow-derived erythroid progenitor cells and delay their maturation. 1 In in ADP IN _ _ _ _ _ 2 chickens chicken NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 5 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 outgrowth outgrowth ADP IN _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 bone bone NOUN NN Number=Sing _ _ _ _ 9 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 delay delay VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 754 # text = This delay is associated with down-regulation of many erythroid cell-specific genes, including alpha- and beta-globin, band 3, band 4.1, and the erythroid cell-specific histone 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 delay delay NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 many many ADJ JJ Degree=Pos _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 band band NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 band band NOUN NN Number=Sing _ _ _ _ 29 4.1 4.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 755 # text = H5. 1 H5 h5 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 756 # text = We show here that estrogens also reduce the number of erythroid progenitor cells in primary human bone marrow cultures. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 reduce reduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 number number NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 bone bone NOUN NN Number=Sing _ _ _ _ 18 marrow marrow NOUN NN Number=Sing _ _ _ _ 19 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 757 # text = To address potential mechanisms by which estrogens suppress erythropoiesis, we have examined their effects on GATA-1, an erythroid transcription factor that participates in the regulation of the majority of erythroid cell-specific genes and is necessary for full maturation of erythrocytes. 1 To to PART TO _ _ _ _ _ 2 address address VERB VB VerbForm=Inf _ _ _ _ 3 potential potential ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 estrogens estrogen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 suppress suppress NOUN NN Number=Sing _ _ _ _ 9 erythropoiesis erythropoiesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 participates participate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 majority majority NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 full full ADJ JJ Degree=Pos _ _ _ _ 44 maturation maturation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 758 # text = We demonstrate that the transcriptional activity of GATA-1 is strongly repressed by the estrogen receptor (ER) in a ligand-dependent manner and that this repression is reversible in the presence of 4-hydroxytamoxifen. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 estrogen estrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 repression repression NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 presence presence NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 hydroxytamoxifen hydroxytamoxifen NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 759 # text = ER-mediated repression of GATA-1 activity occurs on an artificial promoter containing a single GATA-binding site, as well as in the context of an intact promoter which is normally regulated by GATA-1. 1 ER- ER- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 repression repression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 single single ADJ JJ Degree=Pos _ _ _ _ 17 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 context context NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 intact intact ADJ JJ Degree=Pos _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 normally normally ADV RB _ _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 760 # text = GATA-1 and ER bind to each other in vitro in the absence of DNA. 1 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 ER er NOUN NN Number=Sing _ _ _ _ 6 bind bind NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 other other ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 761 # text = In coimmunoprecipitation experiments using transfected COS cells, GATA-1 and ER associate in a ligand-dependent manner. 1 In in ADP IN _ _ _ _ _ 2 coimmunoprecipitation coimmunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 COS Cos NOUN NNS Number=Plur _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 ER er NOUN NN Number=Sing _ _ _ _ 14 associate associate NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 762 # text = Mapping experiments indicate that GATA-1 and the ER form at least two contacts, which involve the finger region and the N-terminal activation domain of GATA-1. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ER er NOUN NN Number=Sing _ _ _ _ 11 form form NOUN NN Number=Sing _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 contacts contact NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 finger finger NOUN NN Number=Sing _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 763 # text = We speculate that estrogens exert effects on erythropoiesis by modulating GATA-1 activity through protein-protein interaction with the ER. (ABSTRACT TRUNCATED AT 250 WORDS) 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 5 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 erythropoiesis erythropoiesis NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 interaction interaction NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ABSTRACT Abstract ADV RB _ _ _ _ _ 25 TRUNCATED tRUNCATEd VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 26 AT at ADV RB _ _ _ _ _ 27 250 250 NUM CD NumType=Card _ _ _ _ 28 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 764 # text = Document 00300267 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300267 00300267 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 765 # text = HMG-I binds to GATA motifs: implications for an HPFH syndrome. 1 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 GATA GATa PROPN NNP Number=Sing _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 implications implication NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 HPFH Hpfh ADJ JJ Degree=Pos _ _ _ _ 13 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 766 # text = We have examined binding of the nuclear protein HMG-I to the human gamma-globin promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 globin globin NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 767 # text = We find that HMG-I binds preferentially to the more 3' of a pair of GATA motifs in the gamma-globin promoter; this paired motif is bound by the erythroid factor GATA-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HMG Hmg VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 preferentially preferentially ADV RB _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 more more ADJ JJR Degree=Cmp _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 pair pair NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 globin globin NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 paired paired ADJ JJ Degree=Pos _ _ _ _ 29 motif motif NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 bound bound ADJ JJ Degree=Pos _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 768 # text = A naturally occurring mutation (-175 T-C) in the area bound by HMG-I results in overexpression of gamma-globin in adult red blood cells (HPFH) and up-regulation of the gamma-globin promoter in in vitro expression assays; HMG-I does not bind to this mutant sequence. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 naturally naturally ADV RB _ _ _ _ _ 3 occurring occurre ADJ JJ Degree=Pos _ _ _ _ 4 mutation mutation NOUN NN Number=Sing _ _ _ _ 5 (- (- PUNCT . _ _ _ _ SpaceAfter=No 6 175 175 NUM CD NumType=Card _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 area area NOUN NN Number=Sing _ _ _ _ 14 bound bound ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 adult adult ADJ JJ Degree=Pos _ _ _ _ 28 red red ADJ JJ Degree=Pos _ _ _ _ 29 blood blood NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 HPFH HPFH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 globin globin NOUN NN Number=Sing _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 vitro vitro NUM CD NumType=Card _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ _ 48 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 ; ; PUNCT , _ _ _ _ _ 50 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 51 - - PUNCT , _ _ _ _ SpaceAfter=No 52 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 53 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 not not PART RB _ _ _ _ _ 55 bind bind VERB VB VerbForm=Inf _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 58 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 59 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 769 # text = A survey of GATA motifs from other globin cis-elements demonstrates HMG-I binding to most of them. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 survey survey NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ _ 5 motifs motif NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 HMG Hmg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 most most ADJ JJS Degree=Sup _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 770 # text = These findings implicate HMG-I in the HPFH phenotype; we speculate that it may participate in the formation of multiprotein complexes that regulate globin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 implicate implicate ADJ JJ Degree=Pos _ _ _ _ 4 HMG Hmg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HPFH Hpfh ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 participate participate VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 multiprotein multiprotein ADJ JJ Degree=Pos _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 globin globin ADJ JJ Degree=Pos _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 771 # text = Document 00300268 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300268 00300268 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 772 # text = A nongenomic mechanism for progesterone-mediated immunosuppression: inhibition of K+ channels, Ca2+ signaling, and gene expression in T lymphocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nongenomic nongenomic ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 773 # text = The mechanism by which progesterone causes localized suppression of the immune response during pregnancy has remained elusive. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 causes cause NOUN NNS Number=Plur _ _ _ _ 7 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 pregnancy pregnancy NOUN NN Number=Sing _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 remained remain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 elusive elusive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 774 # text = Using human T lymphocytes and T cell lines, we show that progesterone, at concentrations found in the placenta, rapidly and reversibly blocks voltage-gated and calcium-activated K+ channels (KV and KCa, respectively), resulting in depolarization of the membrane potential. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 placenta placenta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 rapidly rapidly ADV RB _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 reversibly reversibly ADV RB _ _ _ _ _ 25 blocks block NOUN NNS Number=Plur _ _ _ _ 26 voltage voltage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gated gate ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 calcium- calcium- SYM NFP _ _ _ _ SpaceAfter=No 31 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 33 + + SYM SYM _ _ _ _ _ 34 channels channel NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 KV KV PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 KCa KCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 resulting result VERB VBG VerbForm=Ger _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 depolarization depolarization NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 membrane membrane NOUN NN Number=Sing _ _ _ _ 49 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 775 # text = As a result, Ca2+ signaling and nuclear factor of activated T cells (NF-AT)-driven gene expression are inhibited. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 result result NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 776 # text = Progesterone acts distally to the initial steps of T cell receptor (TCR)-mediated signal transduction, since it blocks sustained Ca2+ signals after thapsigargin stimulation, as well as oscillatory Ca2+ signals, but not the Ca2+ transient after TCR stimulation. 1 Progesterone Progesterone PRON NN Number=Sing _ _ _ _ 2 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 distally distally ADV RB _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 initial initial ADJ JJ Degree=Pos _ _ _ _ 7 steps step NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 since since SCONJ IN _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 blocks block NOUN NNS Number=Plur _ _ _ _ 23 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ca2 ca2 PART TO Abbr=Yes _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 thapsigargin thapsigargin NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 as as ADV RB _ _ _ _ _ 32 well well ADV RB Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 oscillatory oscillatory ADJ JJ Degree=Pos _ _ _ _ 35 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 + + SYM SYM _ _ _ _ _ 44 transient transient NOUN NN Number=Sing _ _ _ _ 45 after after ADP IN _ _ _ _ _ 46 TCR Tcr NOUN NN Number=Sing _ _ _ _ 47 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 777 # text = K+ 1 K K NUM CD NumType=Card _ _ _ SpaceAfter=No 2 + + SYM NFP _ _ _ _ _ # sent_id = 778 # text = channel blockade by progesterone is specific; other steroid hormones had little or no effect, although the progesterone antagonist RU 486 also blocked KV and KCa channels. 1 channel channel NOUN NN Number=Sing _ _ _ _ 2 blockade blockake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 ; ; PUNCT , _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 10 hormones hormone NOUN NNS Number=Plur _ _ _ _ 11 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 little little ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 20 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 21 RU Ru PROPN NNP Number=Sing _ _ _ _ 22 486 486 NUM CD NumType=Card _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 KV KV PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 KCa KCa PROPN NNP Number=Sing _ _ _ _ 28 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 779 # text = Progesterone effectively blocked a broad spectrum of K+ channels, reducing both Kv1.3 and charybdotoxin-resistant components of KV current and KCa current in T cells, as well as blocking several cloned KV channels expressed in cell lines. 1 Progesterone Progesterone PROPN NNP Number=Sing _ _ _ _ 2 effectively effectively ADV RB _ _ _ _ _ 3 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 broad broad ADJ JJ Degree=Pos _ _ _ _ 6 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 Kv1.3 Kv1.3 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 charybdotoxin charybdotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 resistant resistant NOUN NN Number=Sing _ _ _ _ 19 components component NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 KV KV PROPN NNP Number=Sing _ _ _ _ 22 current current PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 KCa KCa PROPN NNP Number=Sing _ _ _ _ 25 current current ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 blocking block VERB VBG VerbForm=Ger _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 cloned clon ADJ JJ Degree=Pos _ _ _ _ 36 KV Kv PROPN NNP Number=Sing _ _ _ _ 37 channels channel NOUN NNS Number=Plur _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 780 # text = Progesterone had little or no effect on a cloned voltage-gated Na+ channel, an inward rectifier K+ channel, or on lymphocyte Ca2+ and Cl- channels. 1 Progesterone Progesterone PRON NN Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 voltage voltage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gated gate ADJ JJ Degree=Pos _ _ _ _ 13 Na na PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 + + SYM SYM _ _ _ _ _ 15 channel channel NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inward inward ADJ JJ Degree=Pos _ _ _ _ 19 rectifier rectifier NOUN NN Number=Sing _ _ _ _ 20 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 channel channel NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 + + SYM SYM _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Cl Cl NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ _ 32 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 781 # text = We propose that direct inhibition of K+ channels in T cells by progesterone contributes to progesterone-induced immunosuppression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 channels channel NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 15 contributes contribute NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 progesterone progesterone VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 782 # text = Document 00300269 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300269 00300269 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 783 # text = Involvement of Rel, Fos, and Jun proteins in binding activity to the IL-2 promoter CD28 response element/AP-1 sequence in human T cells. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Jun Jun PROPN NNP Number=Sing _ _ _ _ 9 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 784 # text = CD28 is an important costimulatory molecule in the activation of human T cells. 1 CD28 Cd28 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 785 # text = Costimulation of T cells through both the Ag receptor and CD28 leads to high level IL-2 production, which is vital to the development of an immune response in vivo. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Ag ag ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 vital vital ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 immune immune ADJ JJ Degree=Pos _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 786 # text = Previous reports have suggested the CD28 stimulation contributes to the activation of the IL-2 promoter by up-regulating the activity of several transcription factors, including AP-1 and nuclear factor-kappaB (NF-kappaB)/Rel family members as well as an uncharacterized transcription factor called CD28 response complex. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 contributes contribute NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 up up ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 several several ADJ JJ Degree=Pos _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 including include VERB VBG VerbForm=Ger _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 Rel Rel PROPN NNP Number=Sing _ _ _ _ 44 family family NOUN NN Number=Sing _ _ _ _ 45 members member NOUN NNS Number=Plur _ _ _ _ 46 as as ADV RB _ _ _ _ _ 47 well well ADV RB Degree=Pos _ _ _ _ 48 as as ADP IN _ _ _ _ _ 49 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 uncharacterized uncharacterized ADJ JJ Degree=Pos _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ _ 53 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 CD28 CD28 NUM CD NumType=Card _ _ _ _ 55 response response NOUN NN Number=Sing _ _ _ _ 56 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 787 # text = While several lines of investigation have suggested that NF-kappaB/Rel family members make up the CD28 response complex transcription factor, other work has not supported this conclusion. 1 While while SCONJ IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 investigation investigation NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 members member NOUN NNS Number=Plur _ _ _ _ 16 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 up up ADP RP _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 complex complex NUM CD NumType=Card _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 work work NOUN NN Number=Sing _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 788 # text = Recent studies suggest that the CD28 response element (CD28RE) does not function independently but works instead in conjunction with the adjacent promoter proximal AP-1-binding site and this hypothesis is confirmed here. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 function function VERB VB VerbForm=Inf _ _ _ _ 15 independently independently ADV RB _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 works work VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 instead instead ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 proximal proximal NOUN NN Number=Sing _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 789 # text = Also in the current study, binding activity to the CD28RE/AP-1 sequence of the IL-2 promoter is evaluated. 1 Also also ADV RB _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 current current ADJ JJ Degree=Pos _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 790 # text = Although four specific complexes can be detected binding to this sequence, only one of these complexes is specific for both the CD28RE and the adjacent AP-1 site. 1 Although although SCONJ IN _ _ _ _ _ 2 four four NUM CD NumType=Card _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 complexes complexe NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 791 # text = Of the NF-kappaB/Rel family members tested, this CD28RE/AP-1-specific complex contains predominantly c-Rel, despite the fact that both p50 and RelA can efficiently bind to the CD28RE. 1 Of of ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 predominantly predominantly ADV RB _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 despite despite ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 fact fact NOUN NN Number=Sing _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 p50 p50 NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 RelA Rela NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 efficiently efficiently ADV RB _ _ _ _ _ 36 bind bind VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 792 # text = c-Fos and c-Jun are also found in this CD28RE/AP-1-specific complex. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Fos Fo NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 793 # text = These data indicate that functional complexes encompassing both the CD28RE and the AP-1-binding sites influence IL-2 promoter activity in CD28-costimulated T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 complexes complexe NOUN NNS Number=Plur _ _ _ _ 7 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 influence influence NOUN NN Number=Sing _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 794 # text = Document 00300270 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300270 00300270 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 795 # text = Monocyte tethering by P-selectin regulates monocyte chemotactic protein-1 and tumor necrosis factor-alpha secretion. 1 Monocyte Monocyte PROPN NNP Number=Sing _ _ _ _ 2 tethering tether VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 8 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 796 # text = Signal integration and NF-kappa B translocation [see comments] 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 integration integration NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 797 # text = Adhesion molecules that tether circulating leukocytes to endothelial cells may also transduce or modulate outside-in signals for cellular activation, providing an initial regulatory point in the inflammatory response. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 tether tether SCONJ IN _ _ _ _ _ 5 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 15 outside outside ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 in in ADP IN _ _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 providing provide VERB VBG VerbForm=Ger _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 initial initial ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 point point NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 798 # text = Adhesion of human monocytes to P-selectin, the most rapidly expressed endothelial tethering factor, increased the secretion of monocyte chemotactic protein-1 (MCP-1) and tumor necrosis factor-alpha (TNF-alpha) by the leukocytes when they were stimulated with platelet-activating factor. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 most most ADV RBS _ _ _ _ _ 11 rapidly rapidly ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 14 tethering tethering NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 22 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 tumor tumor NOUN NN Number=Sing _ _ _ _ 33 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 44 when when ADV WRB PronType=Int _ _ _ _ 45 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 46 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 with with ADP IN _ _ _ _ _ 49 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 activating activate VERB VBG VerbForm=Ger _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 799 # text = Increased cytokine secretion was specifically inhibited by G1, an anti-P-selectin mAb that prevents P-selectin from binding to its ligand (P-selectin glycoprotein ligand-1) on myeloid cells. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 cytokine cytokine PRON PRP _ _ _ _ _ 3 secretion secretion NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 anti-P- anti-P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 mAb mAb PROPN NNP Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 selectin selectin NOUN NN Number=Sing _ _ _ _ 18 from from SCONJ IN _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 ligand ligand NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 selectin selectin NOUN NN Number=Sing _ _ _ _ 26 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 X LS _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 800 # text = Moreover, tethering by P-selectin specifically enhanced nuclear translocation of nuclear factor-kappa B (NF-kappa B), a transcription factor required for expression of MCP-1, TNF-alpha, and other immediate-early genes. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tethering tether VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 early early ADJ JJ Degree=Pos _ _ _ _ 44 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 801 # text = These results demonstrate that P-selectin, through its ligands on monocytes, may locally regulate cytokine secretion in inflamed tissues. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 ligands ligand NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 locally locally ADV RB _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 secretion secretion NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 802 # text = Document 00300271 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300271 00300271 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 803 # text = Signal transduction abnormalities in T lymphocytes from patients with advanced renal carcinoma: clinical relevance and effects of cytokine therapy. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 11 renal renal ADJ JJ Degree=Pos _ _ _ _ 12 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 15 relevance relevance NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 804 # text = Studies have demonstrated abnormalities of the CD3/T-cell antigen receptor (TCR) and pathways of signal transduction in T lymphocytes from animals and patients with advanced malignancy. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CD3/T- Cd3/t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 animals animal NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 patients patient NOUN NNS Number=Plur _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 28 malignancy malignancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 805 # text = Diminished expression of TCRzeta and p56(lck) that are associated with the TCR and reduced nuclear localization of RelA containing nuclear factor kappaB (NFkappaB) complexes have been noted. 1 Diminished Diminished ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 localization localization NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 RelA RelA PROPN NNP Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 806 # text = These defects have been described in T cells from patients with malignant melanoma, renal cell carcinoma (RCC), ovarian cancer, and colorectal cancer. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 defects defects NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 patients patient NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 13 melanoma melanoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 renal renal ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 ovarian ovarian ADJ JJ Degree=Pos _ _ _ _ 23 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 colorectal colorectal ADJ JJ Degree=Pos _ _ _ _ 27 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 807 # text = Preliminary observations also indicate possible correlation with clinical variables such as stage in selected instances. 1 Preliminary Preliminary ADJ JJ Degree=Pos _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 correlation correlation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 variables variable NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 stage stage NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 selected selected VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 instances instance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 808 # text = To further characterize altered expression of TCRzeta, p56(lck), and impaired activation of NFkappaB, T lymphocytes were obtained from 65 patients with RCC, the majority of whom were receiving combination cytokine therapy [interleukin (IL)-2, IFN alpha-containing regimens] and 37 control individuals. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 characterize characterize NOUN NN Number=Sing _ _ _ _ 4 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 65 65 NUM CD NumType=Card _ _ _ _ 26 patients patient NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 majority majority NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 whom whom PRON WP PronType=Rel _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 36 combination combination NOUN NN Number=Sing _ _ _ _ 37 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 38 therapy therapy NOUN NN Number=Sing _ _ _ _ 39 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 IFN Ifn VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 containing contain VERB VBG VerbForm=Ger _ _ _ _ 51 regimens regimen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 ] ] PUNCT -RRB- _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 37 37 NUM CD NumType=Card _ _ _ _ 55 control control NOUN NN Number=Sing _ _ _ _ 56 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 809 # text = In 29 of these patients, levels of TCRzeta and p56(lck) were determined by Western blots of T-cell lysates and semiquantitated using densitometry. 1 In in ADP IN _ _ _ _ _ 2 29 29 NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Western western ADJ JJ Degree=Pos _ _ _ _ 19 blots blot NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lysates lysate NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 semiquantitated semiquantitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ 27 densitometry densitometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 810 # text = Relative levels were then correlated with a series of clinical variables including response to therapy, performance status, survival, disease sites, age, and others. 1 Relative relative ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 series series NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 11 variables variable NOUN NNS Number=Plur _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 performance performance NOUN NN Number=Sing _ _ _ _ 18 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 811 # text = In another group of 28 patients (three individuals from the first group), the frequency of abnormal NFkappaB activation was studied using electrophoretic mobility shift assays after activation of T cells with phorbol myristate acetate/ionomycin or anti-CD3 monoclonal antibody. 1 In in ADP IN _ _ _ _ _ 2 another another DET DT _ _ _ _ _ 3 group group NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 28 28 NUM CD NumType=Card _ _ _ _ 6 patients patient NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 three three NUM CD NumType=Card _ _ _ _ 9 individuals individual NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 frequency frequency NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 20 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 36 myristate myristate NOUN NN Number=Sing _ _ _ _ 37 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 42 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 43 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 812 # text = Changes in these signaling molecules during cytokine treatment were also investigated. 1 Changes change NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 molecules molecule NOUN NNS Number=Plur _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 813 # text = TCRzeta and p56(lck) were detected in the peripheral blood T cells in 27 of 29 patients, and overall, reduced levels were noted visually in 12 of 29 (41%) and 13 of 29 (45%) individuals, respectively. 1 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 T t NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 27 27 NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 29 29 NUM CD NumType=Card _ _ _ _ 19 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 overall overall ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 visually visually ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 12 12 NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 29 29 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 41 41 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 13 13 NUM CD NumType=Card _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 29 29 NUM CD NumType=Card _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 45 45 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 814 # text = When levels were semiquantitated using densitometry, significant decreases of TCRzeta (P = 0.029) and p56(lck) (P = 0.029) but not CD3epsilon (P = 0.131), compared with control levels, were found. 1 When when ADV WRB PronType=Int _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 semiquantitated semiquantitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 densitometry densitometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 significant significant ADJ JJ Degree=Pos _ _ _ _ 9 decreases decrease NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 P P SYM NFP _ _ _ _ _ 14 = = SYM SYM _ _ _ _ _ 15 0.029 0.029 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 P p NOUN NN Number=Sing _ _ _ _ 24 = = SYM SYM _ _ _ _ _ 25 0.029 0.029 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 CD3epsilon CD3epsilon PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 P P SYM NFP _ _ _ _ _ 32 = = SYM SYM _ _ _ _ _ 33 0.131 0.131 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 control control NOUN NN Number=Sing _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 815 # text = In patients treated with IL-2/IFN alpha-based therapy, relative levels of TCRzeta increased significantly (P = 0.002) on day 15 of cycle one compared with the baseline. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NNS Number=Plur _ _ _ _ 3 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 9 IFN Ifn NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 relative relative ADJ JJ Degree=Pos _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 significantly significantly ADV RB _ _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p SYM NFP _ _ _ _ _ 23 = = SYM SYM _ _ _ _ _ 24 0.002 0.002 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 day day NOUN NN Number=Sing _ _ _ _ 28 15 15 NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cycle cycle NOUN NN Number=Sing _ _ _ _ 31 one one NUM CD NumType=Card _ _ _ _ 32 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 baseline baseline NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 816 # text = Correlations of TCRzeta or p56(lck) levels with response or disease variables, except for lower TCRzeta levels (P < 0.001) in the presence of bone metastases, were not found. 1 Correlations Correlation NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 disease disease NOUN NN Number=Sing _ _ _ _ 14 variables variable NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 except except ADP IN _ _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 lower lower ADJ JJR Degree=Cmp _ _ _ _ 19 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p NOUN NN Number=Sing _ _ _ _ 23 < < PUNCT -LRB- _ _ _ _ _ 24 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 presence presence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 bone bone NOUN NN Number=Sing _ _ _ _ 31 metastases metastase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 817 # text = Abnormal NFkappaB activation after stimulation with phorbol myristate acetate/ionomycin and/or anti-CD3 monoclonal antibody was found in 59% of patients (17 of 28) and was not accounted for by the advanced age of the study cohort. 1 Abnormal abnormal PROPN NNP Number=Sing _ _ _ _ 2 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 /ionomycin /ionomycin NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 or or CCONJ CC _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 16 antibody antibody NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 17 17 NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 28 28 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 accounted account VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 37 age age NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 study study NOUN NN Number=Sing _ _ _ _ 41 cohort cohort NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 818 # text = Activation of NFkappaB in peripheral blood T cells was inducible during cytokine therapy in four of six individuals who displayed impaired NFkappaB activity prior to therapy. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 therapy therapy NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 four four NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 six six NUM CD NumType=Card _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ _ 19 who who PRON WP PronType=Rel _ _ _ _ 20 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 22 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 prior prior ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 819 # text = Moreover, impaired activation of NFkappaB does not appear linked to a reduction of TCRzeta expression, because in five patients, normal TCRzeta levels were present although kappaB binding was not inducible. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 7 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 appear appear VERB VB VerbForm=Inf _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 five five NUM CD NumType=Card _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 although although SCONJ IN _ _ _ _ _ 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 820 # text = In the majority of patients with advanced RCC, peripheral blood T cells express TCRzeta and p56(lck), and in a subset, reduced levels of these TCRzeta associated molecules are seen that may increase during cytokine-based therapy. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 majority majority NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 8 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 express express VERB VB VerbForm=Inf _ _ _ _ 15 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 subset subset NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 32 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 molecules molecule NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 that that PRON WDT PronType=Dem _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 increase increase VERB VB VerbForm=Inf _ _ _ _ 39 during during ADP IN _ _ _ _ _ 40 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 821 # text = Abnormal activation of NFkappaB is also present in >50% of patients and may also revert to normal during IL-2/IFN alpha-based treatment. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 present presend ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 > > SYM NFP _ _ _ _ SpaceAfter=No 10 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 revert revert VERB VB VerbForm=Inf _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 normal normal VERB VB VerbForm=Inf _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 IFN Ifn NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 822 # text = This alteration in NFkappaB activation occurred in the presence of normal expression of TCRzeta-associated signaling elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 alteration alteration NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 823 # text = The clinical significance of these findings remains unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 significance significance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 findings finding NOUN NNS Number=Plur _ _ _ _ 7 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 824 # text = Document 00300272 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300272 00300272 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 825 # text = Activation of protein kinase C and elevation of cAMP interact synergistically to raise c-Fos and AP-1 activity in Jurkat cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 C c NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 elevation elevation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 interact interact NOUN NN Number=Sing _ _ _ _ 11 synergistically synergistically ADV RB _ _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 raise raise VERB VB VerbForm=Inf _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Fos Fo NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 826 # text = We have earlier found that in Jurkat cells activation of protein kinase C (PKC) enhances the cyclic adenosine monophosphate (cAMP) accumulation induced by adenosine receptor stimulation or activation of Gs. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 earlier earlier ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 20 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 21 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Gs g NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 827 # text = Here we have therefore examined the effect of the phorbol ester PMA (phorbol 12-myristate 13-acetate) which stimulates PKC and a combination of the adenosine receptor agonist NECA (5'-(N-ethyl)-carboxamido adenosine) and forskolin to raise cAMP, on the levels of c-Fos and Jun and on the binding and transcriptional activity of the transcription factor, activator protein-1 (AP-1). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 therefore therefore ADV RB _ _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 myristate myristate NOUN NN Number=Sing _ _ _ _ 18 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 PKC PKC PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 combination combination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 adenosine adenosine ADJ JJ Degree=Pos _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ _ 32 agonist agonist NOUN NN Number=Sing _ _ _ _ 33 NECA NECA PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 '-( '-( PUNCT . _ _ _ _ SpaceAfter=No 37 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ethyl ethyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 carboxamido carboxamido NOUN NN Number=Sing _ _ _ _ 42 adenosine adenosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 forskolin forskolin VERB VB VerbForm=Inf _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 raise raise VERB VB VerbForm=Inf _ _ _ _ 48 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 Fos Fo PROPN NNP Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 Jun Jun PROPN NNP Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 on on ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 binding binding NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 65 activity activity NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 transcription transcription NOUN NN Number=Sing _ _ _ _ 69 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 , , PUNCT , _ _ _ _ _ 71 activator activator NOUN NN Number=Sing _ _ _ _ 72 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 74 1 1 NUM CD NumType=Card _ _ _ _ 75 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 76 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 80 . . PUNCT . _ _ _ _ _ # sent_id = 828 # text = PMA treatment caused a concentration- and time-dependent increase in both c-Fos and Jun immunoreactivity in contrast to cAMP elevation that had only a slight effect. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 c- c- SYM SYM _ _ _ _ SpaceAfter=No 15 Fos Fos PROPN NNPS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Jun Jun PROPN NNP Number=Sing _ _ _ _ 18 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 cAMP camp VERB VB VerbForm=Inf _ _ _ _ 23 elevation elevation NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 slight slight ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 829 # text = Both PMA and the combination of NECA and forskolin acted together either to increase (c-Fos) or decrease (Jun) protein levels as well as increasing AP-1 binding, as judged by gel-shift assay, and AP-1 transcriptional activity. 1 Both both CCONJ CC _ _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combination combination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NECA NECA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 forskolin forskolin PROPN NNP Number=Sing _ _ _ _ 10 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 together together ADV RB _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Fos Fos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 decrease decrease NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 as as SCONJ IN _ _ _ _ _ 37 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 shift shift NOUN NN Number=Sing _ _ _ _ 42 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 830 # text = Furthermore there was a clear-cut synergy between the PKC stimulator and the cAMP elevating agents. 1 Furthermore furthermore ADV RB _ _ _ _ _ 2 there there PRON EX _ _ _ _ _ 3 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cut cut ADJ JJ Degree=Pos _ _ _ _ 8 synergy synergy NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 PKC Pkc NOUN NN Number=Sing _ _ _ _ 12 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 elevating elevate VERB VBG VerbForm=Ger _ _ _ _ 17 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 831 # text = The results demonstrate that the simultaneous activation of PKC and elevation of cAMP leads to an enhanced AP-1 transcriptional activity in a T-leukemia cell line, suggesting that the previously observed interaction between the parallel signal transduction pathways may have functional consequences at the level of gene transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PKC Pkc NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 elevation elevation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cAMP camp NOUN NN Number=Sing _ _ _ _ 14 leads lead NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 previously previously ADV RB _ _ _ _ _ 34 observed observe ADJ JJ Degree=Pos _ _ _ _ 35 interaction interaction NOUN NN Number=Sing _ _ _ _ 36 between between ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 39 signal signal NOUN NN Number=Sing _ _ _ _ 40 transduction transduction NOUN NN Number=Sing _ _ _ _ 41 pathways pathway NOUN NNS Number=Plur _ _ _ _ 42 may may AUX MD VerbForm=Fin _ _ _ _ 43 have have VERB VB VerbForm=Inf _ _ _ _ 44 functional functional ADJ JJ Degree=Pos _ _ _ _ 45 consequences consequence NOUN NNS Number=Plur _ _ _ _ 46 at at ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 level level NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 832 # text = Document 00300273 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300273 00300273 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 833 # text = Differential effects of lipopolysaccharide and tumor necrosis factor on monocytic IkappaB kinase signalsome activation and IkappaB proteolysis. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 IkappaB IkappaB NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 signalsome signalsome NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 17 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 834 # text = The inflammatory mediators lipopolysaccharide (LPS) and tumor necrosis factor (TNF) are potent activators of NF-kappaB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 mediators mediator NOUN NNS Number=Plur _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 potent potent ADJ JJ Degree=Pos _ _ _ _ 17 activators activator NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 835 # text = This study compared the effect of these stimuli on endogenous IkappaB kinase (IKK) signalsome activation and IkappaB phosphorylation/proteolysis in human monocytic cells and investigated the role of the signalsome proteins IKK-alpha, IKK-beta, NF-kappaB-inducing kinase (NIK), IKK-gamma (NF-kappaB essential modulator), and IKK complex-associated protein. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ _ 35 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 48 kinase kinase NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 gamma gamma PROPN NNP Number=Sing _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 60 essential essential ADJ JJ Degree=Pos _ _ _ _ 61 modulator modulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 IKK IKK PROPN NNP Number=Sing _ _ _ _ 66 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 69 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 836 # text = Kinase assays showed that TNF elicited a rapid but short-lived induction of IKK activity with a 3-fold greater effect on IKK-alpha than on IKK-beta, peaking at 5 min. 1 Kinase Kinase ADJ JJ Degree=Pos _ _ _ _ 2 assays assays NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 elicited elicit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 lived lived ADJ JJ Degree=Pos _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IKK IKK NUM CD NumType=Card _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 fold fold VERB VB VerbForm=Inf _ _ _ _ 22 greater greater ADJ JJR Degree=Cmp _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 alpha alpha ADV RB _ _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 5 5 NUM CD NumType=Card _ _ _ _ 37 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 837 # text = In contrast, LPS predominantly stimulated IKK-beta activity, which slowly increased, peaking at 30 min. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS INTJ UH _ _ _ _ _ 5 predominantly predominantly ADV RB _ _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 slowly slowly ADV RB _ _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 30 30 NUM CD NumType=Card _ _ _ _ 19 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 838 # text = A second peak was observed at a later time point following LPS stimulation, which consisted of both IKK-alpha and -beta activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 peak peak NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 later later ADJ JJR Degree=Cmp _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ _ 10 point point NOUN NN Number=Sing _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 beta beta ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 839 # text = The endogenous levels of the signalsome components were unaffected by stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 unaffected unaffect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 840 # text = Furthermore, our studies showed association of the IKK-alpha/beta heterodimer with NIK, IkappaB-alpha and -epsilon in unstimulated cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 841 # text = Exposure to LPS or TNF led to differential patterns of IkappaB-alpha and IkappaB-epsilon disappearance from and reassembly with the signalsome, whereas IKK-alpha, IKK-beta, and NIK remained complex-associated. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 differential differential ADJ JJ Degree=Pos _ _ _ _ 9 patterns pattern NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IkappaB IkappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 18 disappearance disappearance NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 reassembly reassembly ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 signalsome signalsome NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 IKK Ikk NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NIK NIK PROPN NNP Number=Sing _ _ _ _ 37 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 complex complex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 associated associate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 842 # text = NIK cannot phosphorylate IkappaB-alpha directly, but it appears to be a functionally important subunit, because mutated NIK inhibited stimulus-induced kappaB-dependent transcription more effectively than mutated IKK-alpha or -beta. 1 NIK NIK ADV RB _ _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 3 not not PART RB _ _ _ _ _ 4 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 5 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 directly directly ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 functionally functionally ADV RB _ _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NIK NIK PROPN NNP Number=Sing _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 more more ADV RBR _ _ _ _ _ 32 effectively effectively ADV RB _ _ _ _ _ 33 than than ADP IN _ _ _ _ _ 34 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 843 # text = Overexpression of IKK complex-associated protein inhibited stimulus-mediated transcription, whereas NF-kappaB essential modulator enhanced it. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IKK IKK PROPN NNP Number=Sing _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 stimulus stimulus ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas whereas SCONJ IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 modulator modulator NOUN NN Number=Sing _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 844 # text = The understanding of LPS- and TNF-induced signaling may allow the development of specific strategies to treat sepsis-associated disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 understanding understanding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 allow allow VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 strategies strategy NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 treat treat VERB VB VerbForm=Inf _ _ _ _ 20 sepsis- sepsis- PUNCT : _ _ _ _ SpaceAfter=No 21 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 845 # text = Document 00300274 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300274 00300274 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 846 # text = Extinction of immunoglobulin gene expression in B cells upon fusion with HeLa cells is preceded by rapid nuclear depletion of essential transcription factors and is accompanied by widespread inactivation of genes expressed in a B cell-specific manner. 1 Extinction extinction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 depletion depletion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 29 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 847 # text = When immunoglobulin 1 When when ADV WRB PronType=Int _ _ _ _ 2 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ # sent_id = 848 # text = (Ig) expressing B cells are fused with non-B cells, Ig expression is rapidly suppressed at the level of transcription, a phenomenon termed extinction. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 expressing express VERB VBG VerbForm=Ger _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 fused fuse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 non non X AFX _ _ _ _ SpaceAfter=No 11 -B -b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Ig ig PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 27 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 extinction extinction NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 849 # text = Here we demonstrate that fusion of HeLa cells with either diploid or tetraploid B cells (Daudi) results in widespread extinction of several other B cell-encoded genes that are expressed in a B cell-specific manner. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 fusion fusion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 diploid diploid ADJ JJ Degree=Pos _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 tetraploid tetraploid ADJ JJ Degree=Pos _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 Daudi Daudi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 22 extinction extinction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 850 # text = In contrast, expression of B cell-expressed genes that are not dependent on cell-specific controls is unaffected. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 controls controls NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 851 # text = We show that the molecular mechanism(s) underlying Ig gene extinction can be explained, at least in part, by a lack of transcription factors that are essential for Ig gene transcription. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 underlying underly ADJ JJ Degree=Pos _ _ _ _ 11 Ig ig NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 extinction extinction NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 lack lack NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 essential essential ADJ JJ Degree=Pos _ _ _ _ 32 for for SCONJ IN _ _ _ _ _ 33 Ig ig VERB VBG VerbForm=Ger _ _ _ _ 34 gene gene ADJ JJ Degree=Pos _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 852 # text = These transcription factors are either not produced due to block of transcription of their respective genes (Oct-2, OBF-1, PU.1), or are rendered inactive posttranslationally (NF-kappa B, E47). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 either either CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 due due ADP IN _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 block block NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 respective respective ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 rendered render VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 32 posttranslationally posttranslationally ADV RB _ _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 E47 E47 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 853 # text = By isolating Daudi x 1 By by SCONJ IN _ _ _ _ _ 2 isolating isolate VERB VBG VerbForm=Ger _ _ _ _ 3 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 4 x x NOUN NN Number=Sing _ _ _ _ # sent_id = 854 # text = HeLa heterokaryons a few hours after fusion, we have studied the initial fate of two B cell-specific transcription factors involved in Ig gene transcription, Oct-2 and NF-kappa B. 1 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 2 heterokaryons heterokaryon VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 few few ADJ JJ Degree=Pos _ _ _ _ 5 hours hour NOUN NNS Number=Plur _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initial initial ADJ JJ Degree=Pos _ _ _ _ 14 fate fate NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Ig ig PROPN NNP Number=Sing _ _ _ _ 26 gene gene PROPN NNP Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 855 # text = This report provides the first demonstration that upon fusion with HeLa cells, the nuclear contents of B cell-expressed transcription factors are depleted within a few hours with kinetics that are as fast or faster than that of Ig gene extinction. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 report report NOUN NN Number=Sing _ _ _ _ 3 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 upon upon ADP IN _ _ _ _ _ 9 fusion fusion NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 contents contents NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 within within ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 few few ADJ JJ Degree=Pos _ _ _ _ 29 hours hour NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 fast fast ADJ JJ Degree=Pos _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 faster faster ADJ JJR Degree=Cmp _ _ _ _ 38 than than ADP IN _ _ _ _ _ 39 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 Ig ig ADJ JJ Degree=Pos _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 extinction extinction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 856 # text = Thus, the extinguishing mechanism is effective very early after fusion. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extinguishing extinguishing NOUN NN Number=Sing _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 effective effective ADJ JJ Degree=Pos _ _ _ _ 8 very very ADV RB _ _ _ _ _ 9 early early ADV RB Degree=Pos _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 857 # text = We suggest that extinction of Ig genes is part of a global mechanism that suppresses the differentiation program foreign to the HeLa phenotype. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 extinction extinction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Ig ig ADJ JJ Degree=Pos _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 part part NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 global global ADJ JJ Degree=Pos _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 program program NOUN NN Number=Sing _ _ _ _ 19 foreign foreign ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 23 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 858 # text = Document 00300275 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300275 00300275 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 859 # text = Sequential development of structural and functional alterations in T cells from tumor-bearing mice. 1 Sequential Sequential ADJ JJ Degree=Pos _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 structural structural ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 alterations alteration NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 bearing bearing VERB VBG VerbForm=Ger _ _ _ _ 15 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 860 # text = The TCR alpha beta or -gamma delta chains bind the peptide ligand, whereas the associated CD3 deltaepsilongamma and TCR zeta subunits couple the TCR to intracellular signal transduction components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCR Tcr NOUN NN Number=Sing _ _ _ _ 3 alpha alpha ADP IN _ _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 delta delta NOUN NN Number=Sing _ _ _ _ 9 chains chain NOUN NNS Number=Plur _ _ _ _ 10 bind bind ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 19 deltaepsilongamma deltaepsilongamma NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 zeta zeta NOUN NN Number=Sing _ _ _ _ 23 subunits subunit NOUN NNS Number=Plur _ _ _ _ 24 couple couple NOUN NN Number=Sing _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TCR Tcr NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 transduction transduction NOUN NN Number=Sing _ _ _ _ 31 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 861 # text = Recently, several groups have described marked alterations in signal transduction elements in T cells from cancer patients or in mice bearing tumor for a few weeks (>26 days). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 groups group NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 alterations alteration NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 cancer cancer NOUN NN Number=Sing _ _ _ _ 18 patients patient NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ _ 22 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 few few ADJ JJ Degree=Pos _ _ _ _ 27 weeks week NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 >26 >26 NUM CD NumType=Card _ _ _ _ 30 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 862 # text = The sequence in which these alterations develop is unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 alterations alteration NOUN NNS Number=Plur _ _ _ _ 7 develop develop VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 863 # text = The aim of this study was to explore the kinetics of the development of alterations in signal transduction molecules (TCR zeta chain, NF kappaB family proteins, and tyrosine kinase p56(lck)) in mice bearing MC38 colon adenocarcinoma. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 explore explore VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 alterations alteration NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 signal signal ADJ JJ Degree=Pos _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 molecules molecule NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 zeta zeta NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ _ 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 mice mouse NOUN NNS Number=Plur _ _ _ _ 40 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 41 MC38 MC38 NUM CD NumType=Card _ _ _ _ 42 colon colon NOUN NN Number=Sing _ _ _ _ 43 adenocarcinoma adenocarcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 864 # text = The results demonstrate that alterations in NF kappaB family proteins, specifically the failure of p65 translocation to the nucleus, occur earlier and more frequently than the decrease in zeta-chain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 alterations alteration NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 failure failure NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 more more ADV RBR _ _ _ _ _ 26 frequently frequently ADV RB _ _ _ _ _ 27 than than ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 decrease decrease NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 865 # text = These defects are paralleled by an impaired ability to produce Th1 cytokines (IL-2 and IFN-gamma). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 defects defects NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 8 ability ability NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 produce produce VERB VB VerbForm=Inf _ _ _ _ 11 Th1 Th1 NUM CD NumType=Card _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 866 # text = These initial changes are followed by the eventual loss of TCR zeta chain and p56(lck) and a marked decrease in cytotoxic function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 initial initial ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TCR Tcr NOUN NN Number=Sing _ _ _ _ 12 zeta zeta NOUN NN Number=Sing _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 decrease decrease NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 867 # text = An increased rate of lysosomal degradation is one of the mechanisms responsible for the loss of zeta-chain. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 rate rate NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 loss loss NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 868 # text = Document 00300276 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300276 00300276 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 869 # text = Thymocytes control the CD4 gene differently from mature T lymphocytes. 1 Thymocytes Thymocyte NOUN NNS Number=Plur _ _ _ _ 2 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 differently differently ADV RB _ _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 mature mature ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 870 # text = We analyzed the activity of the enhancer, the promoter and the silencer of the human CD4 gene during T cell development using transgenic mice. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 silencer silencer NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 871 # text = Immunofluorescence studies on thymic populations of mice carrying transgenes in various combinations of these regulatory DNA elements revealed that thymocytes control the CD4 gene in a different manner than mature peripheral T lymphocytes. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 5 populations population NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 9 transgenes transgene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 various various ADJ JJ Degree=Pos _ _ _ _ 12 combinations combination NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 21 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 mature mature ADJ JJ Degree=Pos _ _ _ _ 31 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 32 T t NOUN NN Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 872 # text = The 5'-positive regulatory unit, consisting of the promoter and the 5' enhancer, is already active at the CD4-CD8-double-negative (DN) stage of development. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 positive positive ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' 's PUNCT `` _ _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 already already ADV RB _ _ _ _ _ 21 active active ADJ JJ Degree=Pos _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CD4-CD8 CD4-CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 DN DN NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 stage stage NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 873 # text = However, its activity becomes lower in the double-positive and a fraction of the CD4+ CD8int/- cell population, indicating that an additional enhancer, located in either the first or the third intron of the CD4 gene, is required for CD4 gene expression in this population. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 fraction fraction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 CD8int CD8int ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 /- /- PUNCT . _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 additional additional ADJ JJ Degree=Pos _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 either either CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 39 intron intron NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 43 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 CD4 CD4 NUM CD NumType=Card _ _ _ _ 49 gene gene ADJ JJ Degree=Pos _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 53 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 874 # text = The other studied regulatory element is the minimal CD4 silencer which inhibits CD4 gene expression in peripheral CD8 T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 10 silencer silencer NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CD4 CD4 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 CD8 CD8 PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 875 # text = This silencer is inactive in the most immature DN thymocytes, which probably use a distinct silencer mechanism to down-regulate CD4 gene expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 silencer silencer NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 most most ADV RBS _ _ _ _ _ 8 immature immature ADJ JJ Degree=Pos _ _ _ _ 9 DN Dn NOUN NN Number=Sing _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 probably probably ADV RB _ _ _ _ _ 14 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 silencer silencer NOUN NN Number=Sing _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 down down ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 23 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 876 # text = Unexpectedly, the CD4 silencer is also active in CD4+ CD8int/- cells of the thymus, implying that an anti-silencer may be required to resume CD4 expression in this cell population. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 silencer silencer NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 CD8int CD8int NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 /- /- PUNCT . _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 implying imply VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 anti-silencer anti-silencer NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 resume resume VERB VB VerbForm=Inf _ _ _ _ 28 CD4 CD4 NUM CD NumType=Card _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 877 # text = Altogether, the CD4 gene is regulated by several positive and negative regulatory mechanisms which come into play in a developmentally coordinated manner. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 gene gene PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 several several ADJ JJ Degree=Pos _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 come come VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 play play NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 developmentally developmentally ADV RB _ _ _ _ _ 22 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 878 # text = Document 00300277 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300277 00300277 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 879 # text = Differential regulation of 4E-BP1 and 4E-BP2, two repressors of translation initiation, during human myeloid cell differentiation. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 BP1 BP1 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 4E 4e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 BP2 Bp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 repressors repressor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 translation translation NOUN NN Number=Sing _ _ _ _ 16 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 880 # text = Human myeloid differentiation is accompanied by a decrease in cell proliferation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 881 # text = Because the translation rate is an important determinant of cell proliferation, we have investigated translation initiation during human myeloid cell differentiation using the HL-60 promyelocytic leukemia cell line and the U-937 monoblastic cell line. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 translation translation NOUN NN Number=Sing _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 determinant determinant NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 translation translation NOUN NN Number=Sing _ _ _ _ 17 initiation initiation NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 60 60 NUM CD NumType=Card _ _ _ _ 28 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 937 937 NUM CD NumType=Card _ _ _ _ 37 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 882 # text = A decrease in the translation rate is observed when the cells are induced to differentiate along the monocytic/macrophage pathway or along the granulocytic pathway. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 decrease decrease NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 translation translation NOUN NN Number=Sing _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 along along ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 883 # text = The inhibition in protein synthesis correlates with specific regulation of two repressors of translation initiation, 4E-BP1 and 4E-BP2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 repressors repressor NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 translation translation NOUN NN Number=Sing _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 BP1 Bp1 NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 BP2 Bp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 884 # text = Induction of HL-60 and U-937 cell differentiation into monocytes/macrophages by IFN-gamma or PMA results in a dephosphorylation and consequent activation of 4E-BP1. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 PMA Pma PROPN NNP Number=Sing _ _ _ _ 22 results result NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 BP1 BP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 885 # text = Dephosphorylation of 4E-BP1 was also observed when U-937 cells were induced to differentiate into monocytes/macrophages following treatment with retinoic acid or DMSO. 1 Dephosphorylation Dephosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 BP1 BP1 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 937 937 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 22 following follow VERB VBG VerbForm=Ger _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 26 acid acid NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 886 # text = In contrast, treatment of HL-60 cells with retinoic acid or DMSO, which results in a granulocytic differentiation of these cells, decreases 4E-BP1 amount without affecting its phosphorylation and strongly increases 4E-BP2 amount. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 60 60 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 DMSO Dmso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which DET WDT PronType=Int _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 4E 4e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 BP1 Bp1 PROPN NNP Number=Sing _ _ _ _ 30 amount amount NOUN NN Number=Sing _ _ _ _ 31 without without SCONJ IN _ _ _ _ _ 32 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 strongly strongly ADV RB _ _ _ _ _ 37 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 BP2 Bp2 NUM CD NumType=Card _ _ _ _ 41 amount amount NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 887 # text = Taken together, these data provide evidence for differential regulation of the translational machinery during human myeloid differentiation, specific to the monocytic/macrophage pathway or to the granulocytic pathway. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 provide provide VERB VB VerbForm=Inf _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 translational translational ADJ JJ Degree=Pos _ _ _ _ 14 machinery machinery NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 31 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 888 # text = Document 00300278 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300278 00300278 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 889 # text = Apoptosis signaling pathways in normal T cells: differential activity of Bcl-2 and IL-1beta-converting enzyme family protease inhibitors on glucocorticoid- and Fas-mediated cytotoxicity. 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ _ 2 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 converting convert VERB VBG VerbForm=Ger _ _ _ _ 22 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 protease protease NOUN NN Number=Sing _ _ _ _ 25 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 31 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 890 # text = Fas-mediated apoptosis plays an important role in regulating the immune response in peripheral T cells. 1 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 891 # text = Restimulation of T cell blasts up-regulates Fas and Fas ligand expression, with subsequent interaction leading to cell death. 1 Restimulation Restimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell PROPN NNP Number=Sing _ _ _ _ 5 blasts blast VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 up up ADP RP _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulates regulate NOUN NNS Number=Plur _ _ _ _ 9 Fas Fa NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Fas Fa NOUN NNS Number=Plur _ _ _ _ 12 ligand ligand VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 cell cell VERB VB VerbForm=Inf _ _ _ _ 21 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 892 # text = Overexpression of Bcl-2 in tumor cells blocks apoptosis induced by many stimuli, but inhibition of Fas-mediated killing has not been consistently observed. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 tumor tumor ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 blocks block NOUN NNS Number=Plur _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 many many ADJ JJ Degree=Pos _ _ _ _ 14 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 killing killing NOUN NN Number=Sing _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 consistently consistently ADV RB _ _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 893 # text = To examine the behavior of Bcl-2 in normal cells, T cell blasts were transiently transfected with Bcl-2 and related gene products to determine the effect on apoptotic signaling. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 behavior behavior NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 blasts blast NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 transiently transiently ADV RB _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 related relate ADJ JJ Degree=Pos _ _ _ _ 25 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 determine determine VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 33 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 894 # text = Transient overexpression of Bcl-2 in mouse and human T cell blasts did not block Fas-mediated apoptosis, whereas etoposide- and glucocorticoid-induced cytotoxicity was potently inhibited. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 blasts blast NOUN NNS Number=Plur _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 block block VERB VB VerbForm=Inf _ _ _ _ 17 Fas- Fas- PUNCT : _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas wherea ADV RB _ _ _ _ _ 22 etoposide etoposide ADV RB _ _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 27 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 potently potently ADV RB _ _ _ _ _ 30 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 895 # text = Expression of Bcl-xL and adenovirus E1B 19K did not interfere with anti-Fas killing. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 xL xL PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 adenovirus adenovirus PROPN NNP Number=Sing _ _ _ _ 8 E1B E1B PROPN NNP Number=Sing _ _ _ _ 9 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 K k NUM CD NumType=Card _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 anti anti NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -Fas -Fas SCONJ IN _ _ _ _ _ 17 killing kill VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 896 # text = In contrast, interleukin-1beta-converting enzyme family protease inhibitors Ac-DEVD-CHO and CrmA blocked Fas-mediated apoptosis. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 converting converte VERB VBG VerbForm=Ger _ _ _ _ 10 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 14 Ac- Ac- PUNCT , _ _ _ _ SpaceAfter=No 15 DEVD DEVD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CHO Cho PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CrmA CrmA PROPN NNP Number=Sing _ _ _ _ 20 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 897 # text = These results suggest that peripheral T cells use distinct apoptosis signaling pathways with differential sensitivity to Bcl-2 and interleukin-1beta-converting enzyme family protease inhibitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 differential differential ADJ JJ Degree=Pos _ _ _ _ 15 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 converting convert VERB VBG VerbForm=Ger _ _ _ _ 26 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ _ 28 protease protease NOUN NN Number=Sing _ _ _ _ 29 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 898 # text = Since T cells normally express Bcl-2 and Bcl-xL following activation, their inability to block Fas-mediated apoptosis may allow for the elimination of self-reactive cells and the appropriate regulation of immune responses. 1 Since since SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 normally normally ADV RB _ _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 xL xL PROPN NNP Number=Sing _ _ _ _ 13 following follow VERB VBG VerbForm=Ger _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 inability inability NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 block block VERB VB VerbForm=Inf _ _ _ _ 20 Fas- Fas- PUNCT : _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 allow allow VERB VB VerbForm=Inf _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 elimination elimination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 immune immune ADJ JJ Degree=Pos _ _ _ _ 39 responses respons NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 899 # text = Document 00300279 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300279 00300279 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 900 # text = Activation of pp90rsk and early growth response-1 gene expression by pokeweed mitogen in human B cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 pokeweed pokeweed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 901 # text = The present studies have examined the effects of pokeweed mitogen (PWM) on the induction of early growth response-1 gene (EGR-1) in normal human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 pokeweed pokeweed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PWM PWM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 early early ADJ JJ Degree=Pos _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 902 # text = PWM regulates EGR-1 gene expression by both transcriptional and post-transcriptional mechanisms. 1 PWM PWM PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 post-transcriptional post-transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 903 # text = Transient transfection assays with EGR-1 promoter fragments linked to the chloramphenicol acetyltransferase (CAT) gene demonstrated that PWM induced EGR-1 transcription is conferred by the CArG motif (C C[AT]6GG) in the EGR-1 promoter. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 fragments fragment NOUN NNS Number=Plur _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 14 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 gene gene PRON NN Number=Sing _ _ _ _ 19 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 PWM PWM PROPN NNP Number=Sing _ _ _ _ 22 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 conferred confer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 CArG CArG PROPN NNP Number=Sing _ _ _ _ 32 motif motif NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 C C PROPN NNP Number=Sing _ _ _ _ 35 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 6GG 6gg INTJ UH _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 904 # text = The results further demonstrated the activation of S6 kinase (pp90rsk), evidenced by phosphorylation of S6 and serum response factor (SRF) peptides, in PWM treated B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 S6 S6 NUM CD NumType=Card _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 S6 s6 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 SRF SRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 peptides peptide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 PWM PWM PROPN NNP Number=Sing _ _ _ _ 30 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 905 # text = Taken together, these findings suggest that PWM is able to initiate an intracytoplasmic signalling cascade and EGR-1 induction in normal human B cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PWM PWM PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 signalling signalling NOUN NN Number=Sing _ _ _ _ 16 cascade cascade NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 906 # text = Document 00300280 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300280 00300280 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 907 # text = Inhibition of transcription factors belonging to the rel/NF-kappa B family by a transdominant negative mutant. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transdominant transdominant ADJ JJ Degree=Pos _ _ _ _ 18 negative negative ADJ JJ Degree=Pos _ _ _ _ 19 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 908 # text = The KBF1 factor, which binds to the enhancer 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ # sent_id = 909 # text = A located in the promoter of the mouse MHC class I gene H-2Kb, is indistinguishable from the p50 DNA binding subunit of the transcription factor NF-kappa B, which regulates a series of genes involved in immune and inflammatory responses. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 Kb kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binde VERB VBG VerbForm=Ger _ _ _ _ 25 subunit subunit NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 series series NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ _ 41 involved involved ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 immune immune ADJ JJ Degree=Pos _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 46 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 910 # text = The KBF1/p50 factor binds as a homodimer but can also form heterodimers with the products of other members of the same family, like the c-rel and v-rel (proto)oncogenes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 KBF KBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 p50 p50 NUM CD NumType=Card _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 form form VERB VB VerbForm=Inf _ _ _ _ 15 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 products product NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 members member NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 same same ADJ JJ Degree=Pos _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 like like ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 rel rel NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 v-rel v-rel NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 oncogenes oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 911 # text = The dimerization domain of KBF1/p50 is contained between amino acids 201 and 367. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 KBF KBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p50 p50 NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 amino amino DET DT _ _ _ _ _ 13 acids acid NOUN NNS Number=Plur _ _ _ _ 14 201 201 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 367 367 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 912 # text = A mutant of KBF1/p50 (delta SP), unable to bind to DNA but able to form homo- or heterodimers, has been constructed. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 KBF1/ Kbf1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 p50 p50 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 delta delta NOUN NN Number=Sing _ _ _ _ 8 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 unable unable ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 able able ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 form form VERB VB VerbForm=Inf _ _ _ _ 20 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 913 # text = This protein reduces or abolishes in vitro the DNA binding activity of wild-type proteins of the same family (KBF1/p50, c- and v-rel). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 reduces reduce NOUN NNS Number=Plur _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 abolishes abolish NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADP IN Typo=Yes _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 type type NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 same same ADJ JJ Degree=Pos _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 KBF KBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 1/ 1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 24 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 v- v- SYM NFP _ _ _ _ SpaceAfter=No 30 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 914 # text = This mutant also functions in vivo as a trans-acting dominant negative regulator: 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vivo vivo NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 trans tran NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 acting act VERB VBG VerbForm=Ger _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 negative negative NOUN NN Number=Sing _ _ _ _ 14 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ # sent_id = 915 # text = the transcriptional inducibility of the HIV long terminal repeat (which contains two potential NF-kappa B binding sites) by phorbol ester (PMA) is inhibited when it is co-transfected into CD4+ T cells with the delta SP mutant. 1 the the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 repeat repeat NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 which which PRON WDT PronType=Rel _ _ _ _ 12 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 potential potential ADJ JJ Degree=Pos _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 24 ester ester NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 when when ADV WRB PronType=Int _ _ _ _ 31 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 into into ADP IN _ _ _ _ _ 35 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 T t NUM CD NumType=Card _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 delta delta PROPN NNP Number=Sing _ _ _ _ 42 SP sp PROPN NNP Number=Sing _ _ _ _ 43 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 916 # text = Similarly the basal as well as TNF or IL1-induced activity of the MHC class I H-2Kb promoter can be inhibited by this mutant in two different cell lines. 1 Similarly similarly ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basal basal NOUN NN Number=Sing _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IL1 IL1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 MHC MHC PROPN NNP Number=Sing _ _ _ _ 16 class class NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 H h VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 Kb kb NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 mutant mutant NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 different different ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 917 # text = These results constitute the first formal demonstration that these genes are regulated by members of the rel/NF-kappa B family. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 constitute constitute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADV RBS _ _ _ _ _ 6 formal formal ADJ JJ Degree=Pos _ _ _ _ 7 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rel/ rel/ PUNCT HYPH _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 918 # text = Document 00300281 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300281 00300281 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 919 # text = Functional association of Nmi with Stat5 and Stat1 in IL-2- and IFNgamma-mediated signaling. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 association association NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 920 # text = Using the coiled-coil region of Stat5b as the bait in a yeast two-hybrid screen, we identified the association of Nmi, a protein of unknown function previously reported as an N-Myc interactor. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 coiled coil VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 coil coil NOUN NN Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat5 Stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 b b NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 bait bait NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 19 screen screen NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 association association NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Nmi Nmi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 32 function function NOUN NN Number=Sing _ _ _ _ 33 previously previously ADV RB _ _ _ _ _ 34 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 Myc Myc PROPN NNP Number=Sing _ _ _ _ 40 interactor interactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 921 # text = We further show that Nmi interacts with all STATs except Stat2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 6 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 STATs STAT NOUN NNS Number=Plur _ _ _ _ 10 except except ADP IN _ _ _ _ _ 11 Stat2 stat2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 922 # text = We evaluated two cytokine systems, IL-2 and IFNgamma, and demonstrate that Nmi augments STAT-mediated transcription in response to these cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 17 augments augment NOUN NNS Number=Plur _ _ _ _ 18 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 923 # text = Interestingly, Nmi lacks an intrinsic transcriptional activation domain; instead, Nmi enhances the association of CBP/p300 coactivator proteins with Stat1 and Stat5, and together with CBP/p300 can augment IL-2- and IFNgamma-dependent transcription. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 4 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 instead instead ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 14 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 p300 p300 NUM CD NumType=Card _ _ _ _ 21 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Stat5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 together together ADV RB _ _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 p300 p300 NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 augment augment VERB VB VerbForm=Inf _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 924 # text = Therefore, our data not only reveal that Nmi can potentiate STAT-dependent transcription, but also suggest that it can augment coactivator protein recruitment to at least some members of a group of sequence-specific transcription factors. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 12 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 augment augment VERB VB VerbForm=Inf _ _ _ _ 24 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 at at ADV RB _ _ _ _ _ 29 least least ADV RBS Degree=Sup _ _ _ _ 30 some some DET DT _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 group group NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 925 # text = Document 00300282 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300282 00300282 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 926 # text = Four P-like elements are required for optimal transcription of the mouse IL-4 gene: involvement of a distinct set of nuclear factor of activated T cells and activator protein-1 family proteins. 1 Four four NUM CD NumType=Card _ _ _ _ 2 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 involvement involvement NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 set set NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 927 # text = We previously identified the P sequence as a critical regulatory element of the human IL-4 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 P p NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 928 # text = In the mouse IL-4 promoter, there are five elements homologous to the human P sequence designated conserved lymphokine element 0 (CLE0), P, P2, P3 and P4. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 there there PRON EX _ _ _ _ _ 10 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 five five NUM CD NumType=Card _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 0 0 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CLE0 CLE0 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 P3 P3 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 P4 p4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 929 # text = To characterize the role of these P-like elements and their binding factors in the native promoter, we did transient transfection and electrophoretic mobility shift assays (EMSA). 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 like like ADP IN _ _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 native native ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 transient transient ADJ JJ Degree=Pos _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assay NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 930 # text = Transfection of EL-4 cells with the IL-4 promoter-reporter constructs carrying mutated P-like elements showed that four P-like elements, CLE0, P, P2 and P4, but not P3, were required for optimal activation of the IL-4 promoter. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 EL EL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 constructs construct NOUN NNS Number=Plur _ _ _ _ 16 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 17 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 like like ADP IN _ _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 four four NUM CD NumType=Card _ _ _ _ 24 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 like like ADJ JJ Degree=Pos _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 P2 P2 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 P4 P4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 P3 P3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 4 4 NUM CD NumType=Card _ _ _ _ 51 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 931 # text = EMSA showed that both constitutive and inducible complexes bound to CLE0, P, P2 and P4, whereas only a constitutive complex bound to P3. 1 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 bound bound ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 P2 P2 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 P4 P4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 bound bound ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 P3 P3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 932 # text = In competition and antibody supershift assays in EMSA, complexes formed with P or P2 proved to contain nuclear factor of activated T cells (NFAT) family proteins as major components. 1 In in ADP IN _ _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 antibody antibody PRON NN Number=Sing _ _ _ _ 5 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 P p NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 P2 p2 NOUN NN Number=Sing _ _ _ _ 16 proved prove VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 contain contain VERB VB VerbForm=Inf _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 933 # text = Activator protein (AP)-1 family proteins interacted with CLE0, P, P2 and P4. NFAT 1 Activator Activator NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 interacted interact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 P2 p2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 P4 p4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 934 # text = /AP-1 complex formed only with P and P2. 1 / / PUNCT , _ _ _ _ SpaceAfter=No 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 P p NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 935 # text = Cross-competition assays among the P-like elements revealed element-specific and common complexes. 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -competition -competition NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 among among ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 like like ADP IN _ _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 common common ADJ JJ Degree=Pos _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 936 # text = Six tandem repeats of the P element linked to the SV40 promoter responded to phorbol 12-myristate 13-acetate, while that of other elements did not. 1 Six six NUM CD NumType=Card _ _ _ _ 2 tandem tandem NOUN NN Number=Sing _ _ _ _ 3 repeats repeat NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 P P PROPN NNP Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 937 # text = It would thus appear that components of each P-like element-binding complexes are not identical and may coordinately contribute to transcriptional activity. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 would would AUX MD VerbForm=Fin _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 appear appear VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 components component NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 like like ADP IN _ _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 complexes complex NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 identical identical ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 coordinately coordinately ADV RB _ _ _ _ _ 21 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 938 # text = Document 0030010 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030010 0030010 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 939 # text = HIV enhancer activity perpetuated by NF-kappa B induction on infection of monocytes [see comments] 1 HIV haHive NOUN NN Number=Sing _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 perpetuated perpetuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 940 # text = Permissiveness to replication of human immunodeficiency virus (HIV) differs in T lymphocytes and macrophages. 1 Permissiveness Permissiveness NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 differs differ NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 941 # text = In T cells, HIV transcription is poorly detected in vivo. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 poorly poorly ADV RB _ _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 942 # text = Cloned, normal T lymphocytes show very little, if any, basal activity of the HIV enhancer and low nuclear expression of NF-kappa B, a potent transcriptional activator of the HIV enhancer. 1 Cloned Cloned ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 little little ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 if if SCONJ IN _ _ _ _ _ 11 any any DET DT _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 basal basal ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 low low ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 potent potent NOUN NN Number=Sing _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 activator activator NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 943 # text = In contrast, fixed tissue macrophages express detectable HIV proteins, indicating permanent virus transcription. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 7 express express ADJ JJ Degree=Pos _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 944 # text = One explanation for the perpetuation of virus infection in macrophages could be sustained nuclear NF-kappa B expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 explanation explanation NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 perpetuation perpetuation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 945 # text = However, the U937 monocytic cell line, which is fully permissive to HIV replication, is known to express only low levels of nuclear NF-kappa B. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 fully fully ADV RB _ _ _ _ _ 12 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 express express VERB VB VerbForm=Inf _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 low low ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 946 # text = We show here that chronic HIV infection results in both induction of a nuclear factor with antigenic properties indistinguishable from those of NF-kappa B and permanently increased HIV enhancer activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 18 properties property NOUN NNS Number=Plur _ _ _ _ 19 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 permanently permanently ADV RB _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 HIV Hiv NOUN NN Number=Sing _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 947 # text = This phenomenon, which is independent of tumour necrosis factor, is associated with HIV replication, and is thus likely to explain at least in part the perpetuation of HIV infection in monocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 9 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 likely likely ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 explain explain VERB VB VerbForm=Inf _ _ _ _ 24 at at ADV RB _ _ _ _ _ 25 least least ADV RBS Degree=Sup _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 part part NOUN NN Number=Sing _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 perpetuation perpetuation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV Hiv NOUN NN Number=Sing _ _ _ _ 32 infection infection NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 948 # text = Document 0030011 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011 0030011 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 949 # text = Functional roles of the transcription factor Oct-2A and the high mobility group protein I/Y in HLA-DRA gene expression. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 Oct-2 Oct-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 group group NOUN NN Number=Sing _ _ _ _ 14 protein protein ADV WRB PronType=Rel _ _ _ _ 15 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DRA DRA PROPN NNP Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 950 # text = The class II major histocompatibility complex gene HLA-DRA is expressed in B cells, activated T lymphocytes, and in antigen-presenting cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 DRA DRA PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 presenting presenting ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 951 # text = In addition, HLA-DRA gene expression is inducible in a variety of cell types by interferon-gamma (IFN-gamma). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 DRA DRA PROPN NNP Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 variety variety NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 952 # text = Here we show that the lymphoid-specific transcription factor Oct-2A plays a critical role in HLA-DRA gene expression in class II-positive B cell lines, and that the high mobility group protein (HMG) I/Y binds to multiple sites within the DRA promoter, including the Oct-2A binding site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 A a NOUN NN Number=Sing _ _ _ _ 15 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 DRA DRA PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 class class NOUN NN Number=Sing _ _ _ _ 27 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 positive positive ADJ JJ Degree=Pos _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 high high ADJ JJ Degree=Pos _ _ _ _ 38 mobility mobility NOUN NN Number=Sing _ _ _ _ 39 group group NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 I/Y I/y DET DT _ _ _ _ _ 45 binds bind NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 48 sites site NOUN NNS Number=Plur _ _ _ _ 49 within within ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 DRA DRa PROPN NNP Number=Sing _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 including include VERB VBG VerbForm=Ger _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 binding binding VERB VBG VerbForm=Ger _ _ _ _ 61 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 953 # text = Coexpression of HMG I/Y and Oct-2 in cell lines lacking Oct-2 results in high levels of HLA-DRA gene expression, and in vitro DNA-binding studies reveal that HMG I/Y stimulates Oct-2A binding to the HLA-DRA promoter. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HMG HMG PROPN NNP Number=Sing _ _ _ _ 4 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 DRA DRA PROPN NNP Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 studies study NOUN NNS Number=Plur _ _ _ _ 34 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 HMG HMG PROPN NNP Number=Sing _ _ _ _ 37 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 38 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 A a NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 HLA HLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 DRA DRa PROPN NNP Number=Sing _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 954 # text = Thus, Oct-2A and HMG I/Y may synergize to activate HLA-DRA expression in B cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 HMG HMG PROPN NNP Number=Sing _ _ _ _ 6 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 synergize synergize VERB VB VerbForm=Inf _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 HLA HLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DRA DRa PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 955 # text = By contrast, Oct-2A is not involved in the IFN-gamma induction of the HLA-DRA gene in HeLa cells, but antisense HMG I/Y dramatically decreases the level of induction. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 A a NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DRA DRA PROPN NNP Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 29 HMG HMG PROPN NNP Number=Sing _ _ _ _ 30 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 31 dramatically dramatically ADV RB _ _ _ _ _ 32 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 956 # text = We conclude that distinct sets of transcription factors are involved in the two modes of HLA-DRA expression, and that HMG I/Y may be important for B cell-specific expression, and is essential for IFN-gamma induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 sets set NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 modes mode NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DRA DRA PROPN NNP Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 HMG HMG PROPN NNP Number=Sing _ _ _ _ 24 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 essential essential ADJ JJ Degree=Pos _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 gamma gamma NOUN NN Number=Sing _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 957 # text = Document 0030012 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012 0030012 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 958 # text = Activation of E2F-mediated transcription by human T-cell leukemia virus type I Tax protein in a p16(INK4A)-negative T-cell line. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 Tax tax PROPN NNP Number=Sing _ _ _ _ 16 protein protein VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT : _ _ _ _ SpaceAfter=No 25 negative negative ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 959 # text = The human T-cell leukemia virus type I (HTLV-I) is a causative agent of adult T-cell leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 causative causative ADJ JJ Degree=Pos _ _ _ _ 17 agent agent NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 adult adult NOUN NN Number=Sing _ _ _ _ 20 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 960 # text = Although the exact mechanism by which HTLV-I contributes to leukemogenesis is still unclear, the Tax protein is thought to play a major role in this process. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 exact exact ADJ JJ Degree=Pos _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 still still ADV RB _ _ _ _ _ 15 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Tax tax NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 play play VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 major major ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 961 # text = This 40-kDa polypeptide is able to interact with the tumor suppressor p16(INK4A). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 interact interact VERB VB VerbForm=Inf _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ _ 13 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 14 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 962 # text = Consequently, Tax can activate the signaling pathway that lead to the release of E2F that in turn induces expression of factors required for cell cycle progression. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tax Tax PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signal NOUN NN Number=Sing _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 lead lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 F F PROPN NNP Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ _ 20 induces induce NOUN NNS Number=Plur _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 cycle cycle NOUN NN Number=Sing _ _ _ _ 28 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 963 # text = In this paper, we demonstrate that Tax can also activate E2F-mediated transcription independently of p16(INK4A). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 Tax Tax NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 E2F E2f PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 independently independently ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 964 # text = Indeed, when Tax is coexpressed with the E2F-1 transcription factor in CEM T-cells, which lack expression of p16(INK4A), it strongly potentiates the E2F-dependent activation of a reporter construct driven by a promoter containing E2F binding sites. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CEM CEM PROPN NNP Number=Sing _ _ _ _ 16 T- T- PUNCT , _ _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 strongly strongly ADV RB _ _ _ _ _ 31 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 E2F E2f PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 construct construct NOUN NN Number=Sing _ _ _ _ 41 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 promoter promoter NOUN NN Number=Sing _ _ _ _ 45 containing contain VERB VBG VerbForm=Ger _ _ _ _ 46 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 F F SCONJ IN _ _ _ _ _ 48 binding binding VERB VBG VerbForm=Ger _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 965 # text = This stimulation is abrogated by mutations affecting the E2F-binding sites. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 966 # text = In addition, Tax also stimulates the transcription of the E2F-1 gene itself. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 967 # text = Using Tax mutants that fail to activate either ATF- or NF-kappaB-dependent promoters and different 5' truncation mutants of the E2F-1 promoter, we show that the Tax-dependent transcriptional control of the E2F1 gene involves, at least in part, the ATF binding site located in the E2F-1 promoter. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 Tax tax NOUN NN Number=Sing _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 either either CCONJ CC _ _ _ _ _ 9 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 promoters promoter NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT '' _ _ _ _ _ 22 truncation truncation NOUN NN Number=Sing _ _ _ _ 23 mutants mutant NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 39 control control NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 E2F1 E2F1 PROPN NNP Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 involves involve NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 at at ADV RB _ _ _ _ _ 47 least least ADV RBS Degree=Sup _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 ATF Atf SCONJ IN _ _ _ _ _ 53 binding bind VERB VBG VerbForm=Ger _ _ _ _ 54 site site NOUN NN Number=Sing _ _ _ _ 55 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 E2F E2F NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ _ 61 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 968 # text = Document 0030013 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013 0030013 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 969 # text = Activation-dependent transcriptional regulation of the human Fas promoter requires NF-kappaB p50-p65 recruitment. 1 Activation Activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 Fas Fas PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter ADV RB _ _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 970 # text = Fas (CD95) and Fas ligand (CD95L) are an interacting receptor-ligand pair required for immune homeostasis. 1 Fas Fas PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Fas Fas PROPN NNP Number=Sing _ _ _ _ 7 ligand ligand PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 CD95L Cd95l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 interacting interact ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 pair pair NOUN NN Number=Sing _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 971 # text = Lymphocyte activation results in the upregulation of Fas expression and the acquisition of sensitivity to FasL-mediated apoptosis. 1 Lymphocyte Lymphocyte ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Fas Fas PROPN NNP Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 FasL FasL VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 972 # text = Although Fas upregulation is central to the preservation of immunologic tolerance, little is known about the molecular machinery underlying this process. 1 Although although SCONJ IN _ _ _ _ _ 2 Fas Fas PROPN NNP Number=Sing _ _ _ _ 3 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 preservation preservation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 11 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 little little ADJ JJ Degree=Pos _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 about about ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 machinery machinery NOUN NN Number=Sing _ _ _ _ 20 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 973 # text = To investigate the events involved in activation-induced Fas upregulation, we have examined mRNA accumulation, fas promoter activity, and protein expression in the Jurkat T-cell line treated with phorbol myristate acetate and ionomycin (P/I), pharmacological mimics of T-cell receptor activation. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 involved involved ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 Fas Fas NOUN NNS Number=Plur _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 fas fa NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 P/ Pith NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 45 mimics mimics NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 receptor receptor NOUN NN Number=Sing _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 974 # text = Although resting Jurkat cells express Fas, Fas mRNA was induced approximately 10-fold in 2 h upon P/I stimulation. 1 Although although SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Fas Fas PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 fold fold NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 P/I P/I PROPN NNP Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 975 # text = Using sequential deletion mutants of the human fas promoter in transient transfection assays, we identified a 47-bp sequence (positions -306 to -260 relative to the ATG) required for activation-driven fas upregulation. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 sequential sequential ADJ JJ Degree=Pos _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 fas fas NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 transfection transfection NOUN NN Number=Sing _ _ _ _ 13 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 positions position NOUN NNS Number=Plur _ _ _ _ 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 306 306 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 260 260 NUM CD NumType=Card _ _ _ _ 29 relative relative ADV RB _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 ATG ATG NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 fas fas NOUN NNS Number=Plur _ _ _ _ 40 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 976 # text = Sequence analysis revealed the presence of a previously unrecognized composite binding site for both the Sp1 and NF-kappaB transcription factors at positions -295 to -286. 1 Sequence Sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 10 composite composite SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 positions position NOUN NNS Number=Plur _ _ _ _ 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 295 295 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 286 286 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 977 # text = Electrophoretic mobility shift assay (EMSA) and supershift analyses of this region documented constitutive binding of Sp1 in unactivated nuclear extracts and inducible binding of p50-p65 NF-kappaB heterodimers after P/I activation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 supershift supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 10 analyses analysis NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 16 binding binding NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 binding binding NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 p65 p65 NOUN NN Number=Sing _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 34 after after ADP IN _ _ _ _ _ 35 P/ p/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 activation activation VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 978 # text = Sp1 and NF-kappaB transcription factor binding was shown to be mutually exclusive by EMSA displacement studies with purified recombinant Sp1 and recombinant p50. 1 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 mutually mutually ADV RB _ _ _ _ _ 14 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 17 displacement displacement NOUN NN Number=Sing _ _ _ _ 18 studies study NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 22 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 979 # text = The functional contribution of the kappaB-Sp1 composite site in P/I-inducible fas promoter activation was verified by using kappaB-Sp1 concatamers (-295 to -286) in a thymidine kinase promoter-driven reporter construct and native promoter constructs in Jurkat cells overexpressing IkappaB-alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 contribution contribution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 9 composite composite ADJ JJ Degree=Pos _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 P/I P/I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 14 fas fas NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 verified verify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 24 concatamers concatamer NOUN NNS Number=Plur _ _ _ _ 25 (- (- PUNCT . _ _ _ _ SpaceAfter=No 26 295 295 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 286 286 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 reporter reporter NOUN NN Number=Sing _ _ _ _ 39 construct construct NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 native native ADJ JJ Degree=Pos _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 constructs construct NOUN NNS Number=Plur _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 48 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 980 # text = Site-directed mutagenesis of the critical guanine nucleotides in the kappaB-Sp1 element documented the essential role of this site in activation-dependent fas promoter induction. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 critical critical ADJ JJ Degree=Pos _ _ _ _ 8 guanine guanine NOUN NN Number=Sing _ _ _ _ 9 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 fas fas NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 981 # text = Document 0030014 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030014 0030014 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 982 # text = HIV type 1 protease activation of NF-kappa B within T lymphoid cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 protease protease NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 983 # text = NF-kappa B is a nuclear protein of the rel oncogene family capable of enhancing transcription of several cellular genes, including IL-2 and the IL-2 receptor, and viral genes transcribed from the HIV-1 LTR. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 rel rel ADJ JJ Degree=Pos _ _ _ _ 12 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 capable capable ADJ JJ Degree=Pos _ _ _ _ 15 of of SCONJ IN _ _ _ _ _ 16 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ _ 37 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 984 # text = It has been reported that HIV-1 protease may cleave the NF-kappa B precursor to its active form in vitro. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 protease protease NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 cleave cleave VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 precursor precursor NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 form form NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 985 # text = In this study the effects of HIV protease on NF-kappa B precursor activation were examined in Jurkat T cells by introducing a protease expression vector into the cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV NOUN NN Number=Sing _ _ _ _ 8 protease protease NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 precursor precursor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 introducing introduce VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 protease protease NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 vector vector NOUN NN Number=Sing _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 986 # text = Increased NF-kappa B activity was observed and this increased activity was blocked by a specific inhibitor of the viral protease. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 increased increased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 protease protease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 987 # text = Viral transcription, as measured using LTR-CAT assays, was only slightly enhanced in the HIV-protease expressing cells, while secretion of IL-2 and expression of the IL-2 receptor were not affected. 1 Viral viral ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CAT cat NOUN NN Number=Sing _ _ _ _ 10 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 slightly slightly ADV RB _ _ _ _ _ 15 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 protease protease NOUN NN Number=Sing _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 988 # text = The limited activation of NF-kappa B by HIV protease appears unlikely to have a significant effect on virus expression or T cell function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 limited limited ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 protease protease NOUN NN Number=Sing _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unlikely unlikely ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 have have VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 989 # text = Document 0030015 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030015 0030015 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 990 # text = The regulation of HIV by retinoic acid correlates with cellular expression of the retinoic acid receptors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid ADJ JJ Degree=Pos _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 991 # text = OBJECTIVES: 1 OBJECTIVES objective NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 992 # text = To analyze the effect of retinoic acids (RA) on HIV-1 expression and correlate this effect with expression levels of RA receptors (RARs) in T-lymphoid and monocytoid cell lines. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acids acid NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RA RA X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 RA Ra PROPN NNP Number=Sing _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 993 # text = DESIGN AND METHODS: 1 DESIGN Design NOUN NN Number=Sing _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 994 # text = The effect of all-trans and 9-cis RA on HIV-1 production in T-lymphoid (H9, CEM) and monocytoid (U937,THP-1) cell lines was measured during acute and chronic infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cis cis NOUN NN Number=Sing _ _ _ _ 11 RA Ra NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 H9 H9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ SpaceAfter=No 30 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 acute acute NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 42 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 995 # text = The expression levels of human RAR alpha (hRAR alpha, receptor for all-trans RA) and the human retinoid-X receptor alpha (hRXR alpha receptor for 9-cis RA) were determined by Northern blot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 RAR RAR NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 hRAR hrar NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 all all DET DT _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 trans tran NOUN NNS Number=Plur _ _ _ _ 17 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 retinoid retinoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 X x NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 hRXR hrxr X GW _ _ _ _ _ 29 alpha alpha X GW _ _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT : _ _ _ _ SpaceAfter=No 34 cis cis NOUN NN Number=Sing _ _ _ _ 35 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 Northern northern ADJ JJ Degree=Pos _ _ _ _ 41 blot blot NOUN NN Number=Sing _ _ _ _ 42 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 996 # text = RESULTS: Both all-trans and 9-cis RA inhibited virus replication in HIV-1 IIIB-infected monocytoid cells, in the presence and absence of the co-stimulatory agent phorbol myristate acetate (PMA). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Both both DET DT _ _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cis cis NOUN NN Number=Sing _ _ _ _ 11 RA Ra NOUN NN Number=Sing _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 IIIB Iiib NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 absence absence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 co-stimulatory co-stimulatory ADJ JJ Degree=Pos _ _ _ _ 33 agent agent NOUN NN Number=Sing _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 997 # text = The retinoids had weak or no stimulatory effects on HIV production by T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 998 # text = HIV production by PMA-stimulated T-cell lines was inhibited by these retinoids. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 retinoids retinoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 999 # text = The 9-cis RA was generally more effective than all-trans RA in inhibiting HIV production and in combination generally more effective than the single agents alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 cis cis NOUN NN Number=Sing _ _ _ _ 5 RA Ra PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 generally generally ADV RB _ _ _ _ _ 8 more more ADV RBR _ _ _ _ _ 9 effective effective ADJ JJ Degree=Pos _ _ _ _ 10 than than ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 trans tran NOUN NNS Number=Plur _ _ _ _ 14 RA Ra NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 combination combination NOUN NN Number=Sing _ _ _ _ 22 generally generally ADV RB _ _ _ _ _ 23 more more ADV RBR _ _ _ _ _ 24 effective effective ADJ JJ Degree=Pos _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 single single ADJ JJ Degree=Pos _ _ _ _ 28 agents agent NOUN NNS Number=Plur _ _ _ _ 29 alone alone ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1000 # text = Human RAR alpha was expressed in H9, U937 and THP-1 cells, but almost undetectable in CEM cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 RAR Rar NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 H9 H9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 almost almost ADV RB _ _ _ _ _ 18 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 CEM CEM PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1001 # text = Human RXR alpha was significantly expressed in U937 and THP-1 cells, weakly expressed in H9 cells and not detectable in CEM cells. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 RXR Rxr PROPN NNP Number=Sing _ _ _ _ 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 weakly weakly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 H9 H9 PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 CEM CEM PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1002 # text = After stimulation by PMA, RXR alpha expression increased in H9 and U937 cells but not in CEM cells. 1 After after ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 RXR RXR X GW _ _ _ _ _ 7 alpha alpha X FW Foreign=Yes _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 H9 H9 PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 CEM CEM PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1003 # text = Human RAR alpha expression was unchanged in H9 and CEM cells, and elevated in U937 cells, after PMA stimulation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 RAR Rar NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 unchanged unchange ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 H9 H9 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CEM CEM PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1004 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 1005 # text = The effect of RA on HIV-1 expression was cell-type-dependent and partially correlated with cellular expression of RARs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1006 # text = Endogenous or exogenously administered RA may have a significant role in HIV regulation. 1 Endogenous Endogenous ADJ JJ Degree=Pos _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 exogenously exogenously ADV RB _ _ _ _ _ 4 administered administer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 have have VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1007 # text = Document 0030016 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030016 0030016 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1008 # text = Mycobacterium tuberculosis mannose-capped lipoarabinomannan can induce NF-kappaB-dependent activation of human immunodeficiency virus type 1 long terminal repeat in T cells. 1 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 2 tuberculosis tuberculosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mannose mannose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 capped cap ADJ JJ Degree=Pos _ _ _ _ 6 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ _ 22 terminal terminal NOUN NN Number=Sing _ _ _ _ 23 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1009 # text = Tuberculosis has emerged as an epidemic, extended by the large number of individuals infected with human immunodeficiency virus type 1 (HIV-1). 1 Tuberculosis Tuberculosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 emerged emerge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 epidemic epidemic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 extended extend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 large large ADJ JJ Degree=Pos _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 individuals individual NOUN NNS Number=Plur _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1010 # text = The major goal of this study was to determine whether the mycobacterial cell wall component mannose-capped lipoarabinomannan (ManLAM) of Mycobacterium tuberculosis (M. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 goal goal NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 determine determine VERB VB VerbForm=Inf _ _ _ _ 10 whether whether SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 wall wall NOUN NN Number=Sing _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 mannose mannose NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 capped cap VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 25 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1011 # text = tuberculosis) could activate transcription of HIV-1 in T cells with the use of an in vitro cell culture system. 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 could could AUX MD VerbForm=Fin _ _ _ _ 4 activate activate VERB VB VerbForm=Inf _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 use use NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vitro vitro NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 culture culture NOUN NN Number=Sing _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1012 # text = These experiments are of prime importance considering that CD4-expressing T lymphocytes represent the major virus reservoir in the peripheral blood of infected individuals. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 prime prime ADJ JJ Degree=Pos _ _ _ _ 6 importance importance NOUN NN Number=Sing _ _ _ _ 7 considering consider VERB VBG VerbForm=Ger _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -expressing -expresse VERB VBG VerbForm=Ger _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 21 blood blood NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 infected infect ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1013 # text = Using the 1G5 cell line harbouring the luciferase reporter gene under the control of the HIV-1 LTR, it was first found that culture protein filtrates (CFP) from M. tuberculosis or purified ManLAM could activate HIV-1 LTR-dependent gene expression unlike similarly prepared CFP extracts devoid of ManLAM. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 1G5 1G5 PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ _ 6 harbouring harbour VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 first first ADV RB _ _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 culture culture ADJ JJ Degree=Pos _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 filtrates filtrate NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 CFP CFP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 M. M. PROPN NNP Number=Sing _ _ _ _ 34 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 purified purify ADJ JJ Degree=Pos _ _ _ _ 37 ManLAM ManLAm NOUN NN Number=Sing _ _ _ _ 38 could could AUX MD VerbForm=Fin _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ _ 43 LTR- LTR- X AFX _ _ _ _ SpaceAfter=No 44 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 unlike unlike ADP IN _ _ _ _ _ 48 similarly similarly ADV RB _ _ _ _ _ 49 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 CFP Cfp NOUN NN Number=Sing _ _ _ _ 51 extracts extract NOUN NNS Number=Plur _ _ _ _ 52 devoid devoid NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1014 # text = The implication of protein tyrosine kinase(s), protein kinase A and/or protein kinase C was highlighted by the abrogation of the ManLAM-mediated activation of HIV-1 LTR-driven gene expression using herbimycin A and H7. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implication implication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 protein protein VERB VB VerbForm=Inf _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 A a NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 C c PROPN NNP Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 highlighted highlight VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 abrogation abrogation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 using use VERB VBG VerbForm=Ger _ _ _ _ 40 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 41 A a NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 H7 H7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1015 # text = It was also determined, using electrophoresis mobility shift assays, that M. tuberculosis ManLAM led to the nuclear translocation of the transcription factor NF-kappaB. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 electrophoresis electrophoresis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 mobility mobility NOUN NN Number=Sing _ _ _ _ 9 shift shift NOUN NN Number=Sing _ _ _ _ 10 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 M. M. PROPN NNP Number=Sing _ _ _ _ 14 tuberculosis tuberculosis PROPN NNP Number=Sing _ _ _ _ 15 ManLAM ManLAm PROPN NNP Number=Sing _ _ _ _ 16 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 translocation translocation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1016 # text = M. tuberculosis ManLAM resulted in clear induction of the luciferase gene placed under the control of the wild-type, but not the kappaB-mutated, HIV-1 LTR region. 1 M. m. PROPN NNP Number=Sing _ _ _ _ 2 tuberculosis tuberculosis PROPN NNP Number=Sing _ _ _ _ 3 ManLAM ManLAm PROPN NNP Number=Sing _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 clear clear ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 placed place VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 LTR Ltr NOUN NN Number=Sing _ _ _ _ 32 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1017 # text = Finally, the ManLAM-mediated activation of HIV-1 LTR transcription was found to be independent of the autocrine or paracrine action of endogenous TNF-alpha. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 paracrine paracrine NOUN NN Number=Sing _ _ _ _ 24 action action NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 27 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1018 # text = The results suggest that M. tuberculosis can upregulate HIV-1 expression in T cells and could thus have the potential to influence the pathogenesis of HIV-1 infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 M. M. PROPN NNP Number=Sing _ _ _ _ 6 tuberculosis tuberculosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 thus thus ADV RB _ _ _ _ _ 19 have have VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 potential potential NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 influence influence VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1019 # text = Document 0030017 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030017 0030017 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1020 # text = Effects of glucocorticoids on transcription factor activation in human peripheral blood mononuclear cells. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1021 # text = Glucocorticoids have an inhibitory effect on inflammatory and immune responses, and this may be through the modulation of transcription factor binding to DNA. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1022 # text = The interaction of the transcription factors, activator protein-1 (AP-1), nuclear factor kappa B (NF kappa B), and cAMP-responsive element binding protein (CREB) with DNA and glucocorticoid receptors (GR) was analyzed in human peripheral blood mononuclear cells by gel mobility shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 32 element element NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 42 receptors receptor NOUN NNS Number=Plur _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 51 blood blood NOUN NN Number=Sing _ _ _ _ 52 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 gel gel NOUN NN Number=Sing _ _ _ _ 56 mobility mobility NOUN NN Number=Sing _ _ _ _ 57 shift shift NOUN NN Number=Sing _ _ _ _ 58 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 1023 # text = TNF-alpha, IL-1 beta and phorbol myristate acetate (PMA) treatment increased AP-1 and NF kappa B DNA binding by up to 200% but decreased CREB binding (38%) over a 60-min time course. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 myristate myristate NOUN NN Number=Sing _ _ _ _ 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 DNA Dna PROPN NNP Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 up up NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 200 200 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 CREB Creb NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 38 38 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 over over ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 min min NOUN NN Number=Sing _ _ _ _ 45 time time NOUN NN Number=Sing _ _ _ _ 46 course course NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1024 # text = Dexamethasone produced a rapid and sustained increase in glucocorticoid response element binding and a concomitant 40-50% decrease in AP-1, NF kappa B, and CREB DNA binding that was blocked by combined dexamethasone and cytokine or PMA treatment. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 sustained sustain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 concomitant concomitant NOUN NN Number=Sing _ _ _ _ 16 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 decrease decrease NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CREB CREB NOUN NN Number=Sing _ _ _ _ 32 DNA Dna NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 44 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1025 # text = These latter effects were due to increases in the nuclear localization of GR, not to reduced amounts of the other transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 due due ADP IN _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 increases increase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 reduced reduce VERB VB VerbForm=Inf _ _ _ _ 18 amounts amount NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1026 # text = This suggests that in these cells GR within the nucleus interacts with cytokine-stimulated transcription factors by the process of cross coupling. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 GR Gr VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus ADJ JJ Degree=Pos _ _ _ _ 11 interacts interacts NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cross cross NOUN NN Number=Sing _ _ _ _ 23 coupling coupling NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1027 # text = This may be an important molecular site of steroid action. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1028 # text = Document 0030018 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030018 0030018 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1029 # text = Competent transcription initiation by RNA polymerase II in cell-free extracts from xeroderma pigmentosum groups B and D in an optimized RNA transcription assay. 1 Competent Competent ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 initiation initiation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 RNA RNA PROPN NNP Number=Sing _ _ _ _ 6 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 free free ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 xeroderma xeroderma NOUN NN Number=Sing _ _ _ _ 15 pigmentosum pigmentosum NOUN NN Number=Sing _ _ _ _ 16 groups group NOUN NNS Number=Plur _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 D d PROPN NNP Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 optimized optimized ADJ JJ Degree=Pos _ _ _ _ 23 RNA RNa NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1030 # text = The human autosomal recessive disease, xeroderma pigmentosum (XP), can result from mutations in any one of seven genes, designated XPA through XPG. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 autosomal autosomal ADJ JJ Degree=Pos _ _ _ _ 4 recessive recessive ADJ JJ Degree=Pos _ _ _ _ 5 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 xeroderma xeroderma NOUN NN Number=Sing _ _ _ _ 8 pigmentosum pigmentosum NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 mutations mutation NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 any any DET DT _ _ _ _ _ 19 one one NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 seven seven NUM CD NumType=Card _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 XPA XPA PROPN NNP Number=Sing _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 XPG XPG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1031 # text = Of these, the XPB and XPD genes encode proteins that are subunits of a general transcription factor, TFIIH, involved in both nucleotide excision repair (NER) and initiation of mRNA transcription by RNA polymerase II. 1 Of of ADP IN _ _ _ _ _ 2 these these PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 XPB XPB PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 XPD XPD PROPN NNP Number=Sing _ _ _ _ 8 genes gene VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 encode encode NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 subunits subunit NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 general general ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 TFIIH TFIIh INTJ UH _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 26 excision excision NOUN NN Number=Sing _ _ _ _ 27 repair repair NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NER NER PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 initiation initiation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 RNA RNA PROPN NNP Number=Sing _ _ _ _ 38 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 39 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1032 # text = In humans, mutation of the XPB or XPD gene impairs NER, resulting in hyper-sensitivity to sunlight and greatly increased skin tumor formation. 1 In in ADP IN _ _ _ _ _ 2 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mutation mutation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XPB XPB PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 XPD XPD AUX MD VerbForm=Fin _ _ _ _ 10 gene gene VERB VB VerbForm=Inf _ _ _ _ 11 impairs impairs ADV RB _ _ _ _ _ 12 NER ner ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 resulting result VERB VBG VerbForm=Ger _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 hyper hyper NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 sunlight sunlight NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 greatly greatly ADV RB _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 skin skin NOUN NN Number=Sing _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1033 # text = However, no transcription deficiency has been demonstrated in either XP-B or XP-D. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 either either DET DT _ _ _ _ _ 11 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 B B PROPN NNP Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1034 # text = We have employed an optimized cell-free RNA transcription assay to analyze transcription activity of XP-B and XP-D. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 employed employ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 optimized optimized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 free free ADJ JJ Degree=Pos _ _ _ _ 9 RNA RNa NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 assay assay NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 B B PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1035 # text = Although the growth rate was normal, the XP-B and XP-D cells contained reduced amounts of TFIIH. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 growth growth NOUN NN Number=Sing _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B b PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 D d PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 amounts amount NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 TFIIH TFIIH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1036 # text = Extracts prepared from XP-B and XP-D lymphoblastoid cells exhibited similar transcription activity from the adenovirus major late promoter when compared to that in extracts from normal cells. 1 Extracts Extract NOUN NNS Number=Plur _ _ _ _ 2 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 D d PROPN NNP Number=Sing _ _ _ _ 11 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 when when ADV WRB PronType=Int _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 extracts extract NOUN NNS Number=Plur _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1037 # text = Thus, we conclude that the XP-B and XP-D lymphoblastoid cells do not have impaired RNA transcription activity. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XP Xp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B b NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 XP Xp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 D d NOUN NN Number=Sing _ _ _ _ 14 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 have have AUX VB VerbForm=Inf _ _ _ _ 19 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 RNA RNA PROPN NNP Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1038 # text = We consider the possible consequences of the reduced cellular content of TFIIH for the clinical symptoms in XP-B or XP-D patients, and discuss a 'conditional phenotype' that may involve an impairment of cellular function only under certain growth conditions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 consider consider VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 consequences consequence NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 content content NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TFIIH TFIIh PROPN NNP Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 16 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 D d PROPN NNP Number=Sing _ _ _ _ 25 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 discuss discuss VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 31 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 32 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ' ' PUNCT '' _ _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 involve involve VERB VB VerbForm=Inf _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 impairment impairment NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 41 function function NOUN NN Number=Sing _ _ _ _ 42 only only ADV RB _ _ _ _ _ 43 under under ADP IN _ _ _ _ _ 44 certain certain ADJ JJ Degree=Pos _ _ _ _ 45 growth growth NOUN NN Number=Sing _ _ _ _ 46 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1039 # text = Document 0030019 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030019 0030019 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1040 # text = Targeted remodeling of human beta-globin promoter chromatin structure produces increased expression and decreased silencing. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 globin globin NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 10 structure structure NOUN NN Number=Sing _ _ _ _ 11 produces produce NOUN NNS Number=Plur _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 silencing silencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1041 # text = The chromatin structure of the human beta-globin gene locus assumes a transcriptionally-active conformation in erythroid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 3 structure structure NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 locus locus NOUN NN Number=Sing _ _ _ _ 12 assumes assume VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transcriptionally transcriptionally ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 conformation conformation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1042 # text = One feature of this chromatin reorganization is the formation of DNase 1 hypersensitive sites in the regions of active globin gene promoters. 1 One one NUM CD NumType=Card _ _ _ _ 2 feature feature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 6 reorganization reorganization NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 formation formation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 DNase DNase NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regions region NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 active active ADJ JJ Degree=Pos _ _ _ _ 20 globin globin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1043 # text = This reorganization requires the globin locus control region and is associated with normal expression of the beta-like globin genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 reorganization reorganization NOUN NN Number=Sing _ _ _ _ 3 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 globin globin NOUN NN Number=Sing _ _ _ _ 6 locus locus CCONJ CC _ _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 like like SCONJ IN _ _ _ _ _ 20 globin globin NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1044 # text = To determine whether it is possible to artificially enhance the opening of the chromatin structure of a minimal beta-globin promoter, we placed a 101bp, erythroid-specific DNase 1 hypersensitive site-forming element (HSFE) immediately upstream of the beta-globin promoter and gene. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 possible possible ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 artificially artificially ADV RB _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 opening opening NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 15 structure structure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 placed place VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 101 101 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 DNase DNase NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 forming forming VERB VBG VerbForm=Ger _ _ _ _ 39 element element NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 HSFE HSFE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 immediately immediately ADV RB _ _ _ _ _ 44 upstream upstream NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 globin globin NOUN NN Number=Sing _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1045 # text = This element includes binding sites for NF-E2, AP-1, GATA-1 and Sp-1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Sp sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1046 # text = Constructs were stably transfected into murine erythroleukemia cells and promoter chromatin structure and gene expression were analyzed. 1 Constructs Construct NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 murine murine PRON PRP _ _ _ _ _ 7 erythroleukemia erythroleukemia ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 11 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 12 structure structure NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1047 # text = The HSFE induced an area of enhanced DNase 1 hypersensitivity extending from the transcriptional start site to -300bp of the artificial promoter and significantly increased the proportion of beta-globin promoters in an open chromatin configuration. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HSFE HSFE PROPN NNP Number=Sing _ _ _ _ 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 area area NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 DNase DNase NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ _ 11 extending extend VERB VBG VerbForm=Ger _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 start start NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proportion proportion NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 globin globin NOUN NN Number=Sing _ _ _ _ 34 promoters promoter NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 open open ADJ JJ Degree=Pos _ _ _ _ 38 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 39 configuration configuration NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1048 # text = This remodeling of promoter chromatin structure resulted in 3-fold increases in beta-globin gene transcription and induction, and inhibited long-term beta-globin gene silencing. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 6 structure structure NOUN NN Number=Sing _ _ _ _ 7 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 fold fold VERB VB VerbForm=Inf _ _ _ _ 12 increases increase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 term term NOUN NN Number=Sing _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 globin globin NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 silencing silencing VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1049 # text = These results indicate that a relatively small cis-acting element is able to enhance remodeling of promoter chromatin structure resulting in increased beta-globin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 relatively relatively ADV RB _ _ _ _ _ 7 small small ADJ JJ Degree=Pos _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -acting -acting NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 15 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 19 structure structure NOUN NN Number=Sing _ _ _ _ 20 resulting result VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1050 # text = Document 00300110 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300110 00300110 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1051 # text = Transcriptional control of steroid-regulated apoptosis in murine thymoma cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 murine murine ADJ JJ Degree=Pos _ _ _ _ 10 thymoma thymoma NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1052 # text = Early studies in murine T cell lines indicated that transcriptional transactivation functions encoded in the glucocorticoid receptor (GR) 1 Early Early ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 murine murine ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 functions function NOUN NNS Number=Plur _ _ _ _ 13 encoded encod VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 1053 # text = N-terminal domain are required for glucocorticoid-mediated apoptosis. 1 N- N- SYM NFP _ _ _ _ SpaceAfter=No 2 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1054 # text = However, more recent studies in human T cell lines have suggested that the N-terminal domain is not necessary for steroid-regulated apoptosis and that GR-mediated transrepression may be the more critical mechanism. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 more more ADV RBR _ _ _ _ _ 4 recent recent ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 more more ADV RBR _ _ _ _ _ 36 critical critical ADJ JJ Degree=Pos _ _ _ _ 37 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1055 # text = To better understand the contribution of the GR N-terminal transactivation domain in mediating murine thymocyte apoptosis, we stably transfected GR, GR variants, and the androgen receptor (AR) into receptor-negative S49 murine thymoma cells. 1 To to ADV RB _ _ _ _ _ 2 better better ADV RBR Degree=Cmp _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 contribution contribution NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GR Gr PROPN NNP Number=Sing _ _ _ _ 9 N- N- SYM NFP _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 15 murine murine PRON PRP _ _ _ _ _ 16 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 17 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 stably stably ADV RB _ _ _ _ _ 21 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 GR Gr PROPN NNP Number=Sing _ _ _ _ 25 variants variant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 AR be NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 into into ADP IN _ _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 negative negative ADJ JJ Degree=Pos _ _ _ _ 38 S49 s49 NOUN NN Number=Sing _ _ _ _ 39 murine murine NOUN NN Number=Sing _ _ _ _ 40 thymoma thymoma ADP IN _ _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1056 # text = GR expression levels were shown to be rate-limiting for initiating the apoptotic pathway, and a positive correlation between steroid sensitivity and GR-mediated induction of an integrated mouse mammary tumor virus (MMTV) LTR reporter gene was observed. 1 GR Gr ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 limiting limit NOUN NN Number=Sing _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 correlation correlation NOUN NN Number=Sing _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 23 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 GR Gr NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 mouse mouse NOUN NN Number=Sing _ _ _ _ 33 mammary mammary NOUN NN Number=Sing _ _ _ _ 34 tumor tumor NOUN NN Number=Sing _ _ _ _ 35 virus virus NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 40 reporter reporter NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1057 # text = Analysis of GR chimeric receptors containing the potent VP16 and E1A viral transactivation domains in place of the GR N terminus revealed that even low level expression of these receptors resulted in both enhanced steroid sensitivity and MMTV induction, thus supporting a role for transactivation in apoptosis. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GR Gr ADJ JJ Degree=Pos _ _ _ _ 4 chimeric chimeric NOUN NN Number=Sing _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potent potent NOUN NN Number=Sing _ _ _ _ 9 VP16 VP16 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 viral viral ADJ JJ Degree=Pos _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 domains domain NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 place place NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 GR GR PROPN NNP Number=Sing _ _ _ _ 21 N N PROPN NNP Number=Sing _ _ _ _ 22 terminus terminus NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 low low ADJ JJ Degree=Pos _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 receptors receptor NOUN NNS Number=Plur _ _ _ _ 32 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 both both CCONJ CC _ _ _ _ _ 35 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 37 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 MMTV Mmtv NOUN NN Number=Sing _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 thus thus ADV RB _ _ _ _ _ 43 supporting support VERB VBG VerbForm=Ger _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 role role NOUN NN Number=Sing _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1058 # text = In contrast, we found that AR can initiate apoptosis in S49 cells after treatment with 5 alpha-dihydrotestosterone, despite its relative inability to induce high level expression of MMTV. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 AR ar PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 S49 S49 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dihydrotestosterone dihydrotestosterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 despite despite ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 relative relative ADJ JJ Degree=Pos _ _ _ _ 25 inability inability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 high high ADJ JJ Degree=Pos _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1059 # text = To investigate this further, we examined the steroid-regulated expression of an endogenous thymocyte-specific gene called GIG18. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 further further ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 thymocyte thymocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 GIG18 GIG18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1060 # text = We found that GIG18 was rapidly induced to comparable levels by both AR and GR, demonstrating that AR can indeed function as a transcriptional activator in S49 cells and, moreover, that GIG18 induction may be a marker of early apoptotic events in steroid-treated cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 GIG18 GIG18 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 AR be NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 AR be PROPN NNP Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 indeed indeed ADV RB _ _ _ _ _ 22 function function VERB VB VerbForm=Inf _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activator activator NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 S49 S49 PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 GIG18 Gig18 NOUN NN Number=Sing _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 be be AUX VB VerbForm=Inf _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 marker marker NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 early early ADJ JJ Degree=Pos _ _ _ _ 43 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 44 events event NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1061 # text = Taken together, these results support our conclusion that transcriptional transactivation is a necessary signaling component of S49 cell apoptosis, although an additional role for GR-mediated transrepression cannot be excluded. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 8 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 component component NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 S49 S49 NUM CD NumType=Card _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 additional additional ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate ADJ JJ Degree=Pos _ _ _ _ 30 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 32 not not PART RB _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 excluded exclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1062 # text = Document 00300111 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300111 00300111 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1063 # text = Infection and replication of Tat- human immunodeficiency viruses: genetic analyses of LTR and tat mutations in primary and long-term human lymphoid cells. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 9 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 12 analyses analysis NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 tat tat NOUN NN Number=Sing _ _ _ _ 17 mutations mutation NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 primary primary ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 term term NOUN NN Number=Sing _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1064 # text = Tat is an essential regulatory protein for the replication of human immunodeficiency virus (HIV). 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 essential essential ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1065 # text = Mutations in the tat gene have been shown to block HIV replication in human T cells. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tat tat NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 block block VERB VB VerbForm=Inf _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1066 # text = Several studies have established that Tat releases an elongation block to the transcription of HIV long terminal repeat (LTR); however, it is not known whether this mechanism alone is sufficient to explain the block to HIV replication in human T cells when Tat is absent. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Tat Tat PROPN NNP Number=Sing _ _ _ _ 7 releases release VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 elongation elongation NOUN NN Number=Sing _ _ _ _ 10 block block NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ _ 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 repeat repeat NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 whether whether SCONJ IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 32 alone alone ADV RB _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 explain explain VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 block block NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 human human ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 when when ADV WRB PronType=Int _ _ _ _ 47 Tat Tat PROPN NNP Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1067 # text = It is possible that Tat is also needed for other functions during HIV replication. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Tat Tat PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 HIV HIV NOUN NN Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1068 # text = To test these hypotheses, we studied several tat mutants, including two stop codon mutants and one deletion mutant using replication-competent HIV-1 constructs carrying wild-type or mutant LTRs with modifications in the NF-kappa B and/or Sp1 binding sites. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 hypotheses hypothese NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 tat tat NOUN NN Number=Sing _ _ _ _ 10 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 stop stop NOUN NN Number=Sing _ _ _ _ 15 codon codon NOUN NN Number=Sing _ _ _ _ 16 mutants mutant NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 one one NUM CD NumType=Card _ _ _ _ 19 deletion deletion NOUN NN Number=Sing _ _ _ _ 20 mutant mutant NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 competent competent NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 constructs construct NOUN NNS Number=Plur _ _ _ _ 29 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 30 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 type type NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 35 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 modifications modification NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ SpaceAfter=No 45 / / PUNCT , _ _ _ _ SpaceAfter=No 46 or or CCONJ CC _ _ _ _ _ 47 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1069 # text = In this study, we show that Tat- HIV-1 with wild-type LTRs can replicate in HeLa cells, and the virus produced from HeLa cells can infect primary peripheral blood lymphocytes and macrophages. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 infect infect VERB VB VerbForm=Inf _ _ _ _ 33 primary primary ADJ JJ Degree=Pos _ _ _ _ 34 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1070 # text = It was found that the propagation of the Tat mutants containing wild-type LTRs was less efficient than that of the LTR-modified Tat mutants. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 propagation propagation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Tat Tat PROPN NNP Number=Sing _ _ _ _ 10 mutants mutant PROPN NNPS Number=Plur _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 type type NOUN NN Number=Sing _ _ _ _ 15 LTRs LTR PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 less less ADV RBR Degree=Cmp _ _ _ _ 18 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR- ltr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 Tat Tat PROPN NNP Number=Sing _ _ _ _ 26 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1071 # text = Large amounts of viral RNA and particles were synthesized in infections established using the tat mutants that contain modified LTRs. 1 Large large ADJ JJ Degree=Pos _ _ _ _ 2 amounts amount NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 RNA RNa NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 particles particle NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 infections infection NOUN NNS Number=Plur _ _ _ _ 12 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tat tat NOUN NN Number=Sing _ _ _ _ 16 mutants mutant NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 LTRs LTR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1072 # text = However, this efficient propagation of the LTR-modified tat mutants was restricted to some lymphoid cell lines that have been transformed with other viruses. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 5 propagation propagation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 tat tat NOUN NN Number=Sing _ _ _ _ 11 mutants mutant NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 viruses virus NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1073 # text = Thus, despite its essential role for releasing an elongation block, Tat is not otherwise absolutely required for synthesis of full-length HIV transcripts and assembly of virus particles. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 despite despite ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 releasing release VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 elongation elongation NOUN NN Number=Sing _ _ _ _ 11 block block NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Tat Tat PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 otherwise otherwise ADV RB _ _ _ _ _ 17 absolutely absolutely ADV RB _ _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 length length NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ _ 26 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 assembly assembly NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 particles particle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1074 # text = Direct sequencing of the viral genomes and reinfection kinetics showed no evidence of wild-type reversion even after prolonged infection with the Tat- virus. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 genomes genome NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 reinfection reinfection NOUN NN Number=Sing _ _ _ _ 9 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 evidence evidence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 reversion reversion NOUN NN Number=Sing _ _ _ _ 18 even even ADV RB _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1075 # text = The implications for in vivo HIV-1 replication and potential application of this system to the study of alternative Tat function are discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implications implication NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo PROPN NNP Number=Sing _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 potential potential ADJ JJ Degree=Pos _ _ _ _ 12 application application NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 study study NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 21 Tat Tat NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1076 # text = Document 00300112 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300112 00300112 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1077 # text = The human prointerleukin 1 beta gene requires DNA sequences both proximal and distal to the transcription start site for tissue-specific induction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 prointerleukin prointerleukin NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 distal distal ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1078 # text = In these studies, we have identified DNA sequences and specific protein interactions necessary for transcriptional regulation of the human prointerleukin 1 beta (proIL-1 beta) gene. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 prointerleukin prointerleukin NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1079 # text = A cell-type-independent lipopolysaccharide (LPS)-responsive enhancer element located between -3757 and -2729 bp upstream from the transcription start site (cap site) consisted of at least six discrete subregions which were essential to the maximal induction by LPS in transfected monocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 -3757 -3757 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 2729 2729 NUM CD NumType=Card _ _ _ _ 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 upstream upstream NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 start start NOUN NN Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 cap cap NOUN NN Number=Sing _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 at at ADV RB _ _ _ _ _ 35 least least ADV RBS Degree=Sup _ _ _ _ 36 six six NUM CD NumType=Card _ _ _ _ 37 discrete discrete NOUN NN Number=Sing _ _ _ _ 38 subregions subregion NOUN NNS Number=Plur _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 essential essential ADJ JJ Degree=Pos _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 LPS Lp NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 1080 # text = The enhancer also appeared to mediate phorbol myristate acetate induction in monocytes and IL-1 responsiveness in fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1081 # text = Deletion and base substitution mutations along with DNA binding studies demonstrated that the enhancer contained a minimum of three functional protein binding sequences, two of which appeared to be important for gene induction. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 base base NOUN NN Number=Sing _ _ _ _ 4 substitution substitution NOUN NN Number=Sing _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ _ 6 along along ADP IN _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 studies study NOUN NNS Number=Plur _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 minimum minimum NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1082 # text = One of the essential proteins which bound to the enhancer was similar or identical to members of the C/EBP family of transcription factors required for both IL-1- and LPS-specific induction of the IL-6 gene (i.e., the NF-IL6 proteins). 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 essential essential ADJ JJ Degree=Pos _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 identical identical ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 EBP EBP PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 6 6 NUM CD NumType=Card _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 50 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 1083 # text = When ligated to the proIL-1 beta cap site-proximal region (located between -131 to +12), both the proIL-1 beta and the simian virus 40 enhancer elements functioned more efficiently in monocytes than in HeLa cells, which are not normally competent for IL-1 beta expression. 1 When when ADV WRB PronType=Int _ _ _ _ 2 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 cap cap NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 proximal proximal NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 131 131 NUM CD NumType=Card _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 +12 +12 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 simian simian ADJ JJ Degree=Pos _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 40 40 NUM CD NumType=Card _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 35 elements element NOUN NNS Number=Plur _ _ _ _ 36 functioned function VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 more more ADV RBR _ _ _ _ _ 38 efficiently efficiently ADV RB _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 41 than than ADP IN _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 which which PRON WDT PronType=Rel _ _ _ _ 47 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 normally normally ADV RB _ _ _ _ _ 50 competent competent ADJ JJ Degree=Pos _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 1 1 NUM CD NumType=Card _ _ _ _ 55 beta beta NOUN NN Number=Sing _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1084 # text = When ligated to the murine c-fos promoter, however, the proIL-1 beta enhancer was inducible in phorbol myristate acetate-stimulated HeLa cells, suggesting the existence of a proIL-1 beta promoter-proximal requirement for tissue specificity. 1 When when ADV WRB PronType=Int _ _ _ _ 2 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 23 myristate myristate NOUN NN Number=Sing _ _ _ _ 24 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 existence existence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 proximal proximal NOUN NN Number=Sing _ _ _ _ 42 requirement requirement NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 tissue tissue NOUN NN Number=Sing _ _ _ _ 45 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1085 # text = Document 00300113 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300113 00300113 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1086 # text = Interaction of HTLV-I Tax with the human proteasome: implications for NF-kappa B induction. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 Tax tax PROPN NNP Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 implications implication NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1087 # text = The human T-cell leukemia virus type I (HTLV-I) has been etiologically associated with the development of the adult T-cell leukemia (ATL) as well as degenerative neurologic syndrome termed tropical spastic paraparesis (TSP). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 etiologically etiologically ADV RB _ _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adult adult NOUN NN Number=Sing _ _ _ _ 24 T- T- PUNCT , _ _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 ATL ATL INTJ UH _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 degenerative degenerative ADJ JJ Degree=Pos _ _ _ _ 34 neurologic neurologic ADJ JJ Degree=Pos _ _ _ _ 35 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 36 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 tropical tropical ADJ JJ Degree=Pos _ _ _ _ 38 spastic spastic ADJ JJ Degree=Pos _ _ _ _ 39 paraparesis paraparesis NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TSP TSP NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1088 # text = HTLV-I encodes a potent transactivator protein termed Tax that appears to play an important role in the process of T-cell immortalization. 1 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 8 protein protein ADV WRB PronType=Rel _ _ _ _ 9 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 Tax Tax NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 play play VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 immortalization immortalization NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1089 # text = Even though the mechanisms by which Tax induces transformation are still unknown, it seems likely that the ability of Tax to alter the expression of many cellular genes plays an important part in this process. 1 Even even ADV RB _ _ _ _ _ 2 though though SCONJ IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which DET WDT PronType=Int _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 still still ADV RB _ _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Tax tax PROPN NNP Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 alter alter VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 many many ADJ JJ Degree=Pos _ _ _ _ 28 cellular celular ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 important important ADJ JJ Degree=Pos _ _ _ _ 33 part part NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 36 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1090 # text = Tax does not bind directly to DNA but rather deregulates the activity of cellular transcription factors. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 bind bind VERB VB VerbForm=Inf _ _ _ _ 5 directly directly ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 DNA Dna NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 rather rather ADV RB _ _ _ _ _ 10 deregulates deregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1091 # text = One family of host transcription factors whose activity is altered by Tax includes NF-kappa B/Rel. 1 One one NUM CD NumType=Card _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 host host NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Tax tax PROPN NNP Number=Sing _ _ _ _ 13 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1092 # text = These transcription factors are post-transcriptionally regulated by their assembly with a second family of inhibitory proteins termed I kappa B that serve to sequester the NF-kappa B/Rel complexes in the cytoplasm. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 post post VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 -transcriptionally -transcriptionally ADV RB _ _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 assembly assembly NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 sequester sequester VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 Rel Rel NOUN NN Number=Sing _ _ _ _ 33 complexes complex NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1093 # text = Upon cellular activation, I kappa B alpha is phosphorylated, polyubiquitinated, and degraded in the proteasome. 1 Upon upon ADP IN _ _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 polyubiquitinated polyubiquitinate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1094 # text = This proteolytic event liberates NF-kappa B, permitting its rapid translocation into the nucleus where it binds to its cognate enhancer elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ _ 4 liberates liberate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 permitting permitt VERB VBG VerbForm=Ger _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1095 # text = Similarly, the p105 precursor of the NF-kappa B p50 subunit is also post-translationally processed in the proteasome. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p105 p105 NOUN NN Number=Sing _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 post post X AFX _ _ _ _ SpaceAfter=No 17 -translationally -translationally ADV RB _ _ _ _ _ 18 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1096 # text = The mechanisms by which Tax activates NF-kappa B remain unclear, and findings presented in the literature are often controversial. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 Tax tax PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 findings finding NOUN NNS Number=Plur _ _ _ _ 16 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 literature literature NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 often often ADV RB _ _ _ _ _ 22 controversial controversial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1097 # text = We identified a physical interaction between Tax and the HsN3 subunit of the human proteasome. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 physical physical ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 Tax Tax NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HsN3 HsN3 NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1098 # text = This raises the intriguing possibility that physical association of the HsN3 proteasome subunit with HTLV-I Tax coupled with the independent interaction of Tax with either p100 or p65-I kappa B alpha targets these cytoplasmic NF-kappa B/Rel complexes to the proteasome for processing. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 raises rais VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intriguing intrigue VERB VBG VerbForm=Ger _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 physical physical ADJ JJ Degree=Pos _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HsN3 HsN3 NUM CD NumType=Card _ _ _ _ 12 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 Tax tax PROPN NNP Number=Sing _ _ _ _ 19 coupled couple VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 interaction interaction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 either either CCONJ CC _ _ _ _ _ 28 p100 p100 NUM CD NumType=Card _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 -I -i ADJ JJ Degree=Pos _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 alpha alpha ADP IN _ _ _ _ _ 35 targets target NOUN NNS Number=Plur _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 38 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 Rel Rel NOUN NN Number=Sing _ _ _ _ 44 complexes complex NOUN NNS Number=Plur _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 48 for for ADP IN _ _ _ _ _ 49 processing processing NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1099 # text = Document 00300114 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300114 00300114 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1100 # text = X-rays-induced secretion of cellular factor(s) that enhance(s) HIV-1 promoter transcription in various non-irradiated transfected cell lines. 1 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 rays ray NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 enhance enhance NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 s s X AFX _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 non-irradiated non-irradiated ADJ JJ Degree=Pos _ _ _ _ 26 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1101 # text = Various cellular stress agents like ionizing radiation exposure could activate human immunodeficiency virus type 1 (HIV- 1) replication or reporter gene expression. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 stress stress NOUN NN Number=Sing _ _ _ _ 4 agents agent NOUN NNS Number=Plur _ _ _ _ 5 like like SCONJ IN _ _ _ _ _ 6 ionizing ionize VERB VBG VerbForm=Ger _ _ _ _ 7 radiation radiation NOUN NN Number=Sing _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1102 # text = In addition, extracellular factor(s) released by X-ray-treated human colonic carcinoma cell line (HT29) might activate the long terminal repeat (LTR) of HIV-1 in non-irradiated HT29 cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 extracellular extracelular ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 s s X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ray ray NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 colonic colonic NOUN NN Number=Sing _ _ _ _ 18 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HT29 HT29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 might might AUX MD VerbForm=Fin _ _ _ _ 25 activate activate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 non-irradiated non-irradiated ADJ JJ Degree=Pos _ _ _ _ 39 HT29 HT29 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1103 # text = In the present report we show that in various transiently or stably transfected cell lines, X-ray irradiation up-regulates HIV-1 LTR transcription through the kappaB regulatory elements. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 transiently transiently ADV RB _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 stably stably ADV RB _ _ _ _ _ 13 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 X x PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ray ray NOUN NN Number=Sing _ _ _ _ 20 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 LTR Ltr NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1104 # text = A factor(s), which is processed by and acts upon a variety of cell types, was detected by addition to non-irradiated cells of either X-ray-treated cells or a conditioned medium taken from irradiated cultures. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 processed process VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 variety variety NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 addition addition NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 non-irradiated non-irradiate ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 either either CCONJ CC _ _ _ _ _ 29 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 ray ray NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 medium medium NOUN NN Number=Sing _ _ _ _ 39 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 irradiated irradiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1105 # text = The magnitude of responsiveness is cell type dependent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 1106 # text = In addition, X-ray activation of HIV-1 LTR in transiently or stably transfected cell lines is inhibited by a potent antioxidant drug, pyrrolidine dithiocarbamate and by another drug, known for its role in the trapping of growth factors, suramin. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 ray ray NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transiently transiently ADV RB _ _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 stably stably ADV RB _ _ _ _ _ 17 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 potent potent ADJ JJ Degree=Pos _ _ _ _ 25 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 26 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 pyrrolidine pyrrolidine PRON PRP _ _ _ _ _ 29 dithiocarbamate dithiocarbamate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 another another DET DT _ _ _ _ _ 33 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 role role NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 trapping trapping NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 growth growth NOUN NN Number=Sing _ _ _ _ 44 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 suramin suramin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1107 # text = The importance of these observations in the pathophysiology of patients with AIDS-related cancers treated by radiotherapy remains to be established. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 related related ADJ JJ Degree=Pos _ _ _ _ 15 cancers cancer NOUN NNS Number=Plur _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 radiotherapy radiotherapy NOUN NN Number=Sing _ _ _ _ 19 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1108 # text = Document 00300115 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300115 00300115 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1109 # text = TRAMP, a novel apoptosis-mediating receptor with sequence homology to tumor necrosis factor receptor 1 and Fas(Apo-1/CD95). 1 TRAMP TRAMP SYM NFP _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediating mediating VERB VBG VerbForm=Ger _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 Apo-1/CD95 Apo-1/CD95 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1110 # text = A novel member of the tumor necrosis factor (TNF) receptor family, designated TRAMP, has been identified. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 member member NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TRAMP Tramp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1111 # text = The structural organization of the 393 amino acid long human TRAMP is most homologous to TNF receptor 1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 organization organization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 393 393 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acid acid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 long long ADV RB Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 TRAMP Tramp NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 most most ADV RBS _ _ _ _ _ 14 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1112 # text = TRAMP is abundantly expressed on thymocytes and lymphocytes. 1 TRAMP Tramp NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 abundantly abundantly ADV RB _ _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 1113 # text = Its extracellular domain is composed of four cysteine-rich domains, and the cytoplasmic region contains a death domain known to signal apoptosis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 2 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 signal signal VERB VB VerbForm=Inf _ _ _ _ 25 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1114 # text = Overexpression of TRAMP leads to two major responses, NF-kappaB activation and apoptosis. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TRAMP TRAMP NOUN NN Number=Sing _ _ _ _ 4 leads lead NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1115 # text = TRAMP-induced cell death is inhibited by an inhibitor of ICE-like proteases, but not by Bcl-2. 1 TRAMP TRAMp SYM NFP _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 death death NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ICE ice PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 like like ADP IN _ _ _ _ _ 15 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1116 # text = In addition, TRAMP does not appear to interact with any of the known apoptosis-inducing ligands of the TNF family. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TRAMP TRAMP NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 appear appear VERB VB VerbForm=Inf _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 interact interact VERB VB VerbForm=Inf _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 any any DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 ligands ligand NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1117 # text = Document 00300116 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300116 00300116 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1118 # text = Interactions between the class II transactivator and CREB binding protein increase transcription of major histocompatibility complex class II genes. 1 Interactions Interaction NOUN NNS Number=Plur _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 class class NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1119 # text = Class II major histocompatibility (class II) genes are regulated in a B-cell-specific and gamma interferon-inducible fashion. 1 Class class NOUN NN Number=Sing _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ _ 3 major major ADJ JJ Degree=Pos _ _ _ _ 4 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1120 # text = The master switch for the expression of these genes is the class II transactivator (CIITA). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 master master NOUN NN Number=Sing _ _ _ _ 3 switch switch NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1121 # text = In this report, we demonstrate that one of the functions of CIITA is to recruit the CREB binding protein (CBP) to class II promoters. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 14 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 recruit recruit VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CREB CREB NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 class class VERB VB VerbForm=Inf _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1122 # text = Not only functional but also specific binding interactions between CIITA and CBP were demonstrated. 1 Not not ADV RB _ _ _ _ _ 2 only only ADV RB _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 CBP CBP PROPN NNP Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1123 # text = Moreover, a dominant negative form of CBP decreased the activity of class II promoters and levels of class II determinants on the surface of cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CBP CBP PROPN NNP Number=Sing _ _ _ _ 9 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 class class NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 determinants determinant NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 surface surface NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1124 # text = Finally, the inhibition of class II gene expression by the glucocorticoid hormone could be attributed to the squelching of CBP by the glucocorticoid receptor. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 hormone hormone NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 squelching squelching NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CBP CBP PROPN NNP Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1125 # text = We conclude that CBP, a histone acetyltransferase, plays an important role in the transcription of class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 CBP CBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 histone histone NOUN NN Number=Sing _ _ _ _ 8 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1126 # text = Document 00300117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300117 00300117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1127 # text = A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p [see comments] 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 histone histone NOUN NN Number=Sing _ _ _ _ 4 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 Rpd3 Rpd3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 p p NOUN NN Number=Sing _ _ _ _ 13 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1128 # text = Trapoxin is a microbially derived cyclotetrapeptide that inhibits histone deacetylation in vivo and causes mammalian cells to arrest in the cell cycle. 1 Trapoxin Trapoxin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 microbially microbially ADV RB _ _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cyclotetrapeptide cyclotetrapeptide NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 histone histone NOUN NN Number=Sing _ _ _ _ 10 deacetylation deacetylation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 arrest arrest VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1129 # text = A trapoxin affinity matrix was used to isolate two nuclear proteins that copurified with histone deacetylase activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 trapoxin trapoxin NOUN NN Number=Sing _ _ _ _ 3 affinity affinity NOUN NN Number=Sing _ _ _ _ 4 matrix matrix NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 copurified copurify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 histone histone NOUN NN Number=Sing _ _ _ _ 16 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1130 # text = Both proteins were identified by peptide microsequencing, and a complementary DNA encoding the histone deacetylase catalytic subunit (HD1) was cloned from a human Jurkat T cell library. 1 Both both DET DT _ _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 peptide peptide NOUN NN Number=Sing _ _ _ _ 7 microsequencing microsequencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 histone histone NOUN NN Number=Sing _ _ _ _ 16 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 17 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HD1 Hd1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1131 # text = As the predicted protein is very similar to the yeast transcriptional regulator Rpd3p, these results support a role for histone deacetylase as a key regulator of eukaryotic transcription. 1 As as SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 very very ADV RB _ _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulator regulator NOUN NN Number=Sing _ _ _ _ 13 Rpd3 Rpd3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 histone histone NOUN NN Number=Sing _ _ _ _ 23 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 key key ADJ JJ Degree=Pos _ _ _ _ 27 regulator regulator NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1132 # text = Document 00300118 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300118 00300118 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1133 # text = BCL-6 expression during B-cell activation. 1 BCL Bcl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1134 # text = Translocations involving the BCL-6 gene are common in the diffuse large cell subtype of non-Hodgkin's lymphoma. 1 Translocations Translocation NOUN NNS Number=Plur _ _ _ _ 2 involving involve VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 common common ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 diffuse diffuse NOUN NN Number=Sing _ _ _ _ 13 large large ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 subtype subtype NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 non-Hodgkin non-Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 's 's PART POS _ _ _ _ _ 19 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1135 # text = Invariably, the BCL-6 coding region is intact, but its 5' untranslated region is replaced with sequences from the translocation partner. 1 Invariably Invariably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 coding coding NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 intact intact ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 14 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ _ 17 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 sequences sequence NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 translocation translocation NOUN NN Number=Sing _ _ _ _ 26 partner partner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1136 # text = The present study shows that BCL-6 expression is regulated in lymphocytes during mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 shows show NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 BCL Bcl VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1137 # text = Resting B and T lymphocytes contain high levels of BCL-6 mRNA. 1 Resting rest PROPN NNP Number=Sing _ _ _ _ 2 B b PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ _ 13 mRNA. mRNA. NOUN NN Number=Sing _ _ _ _ # sent_id = 1138 # text = Stimulation of mouse B cells with anti-IgM or IgD antibodies, bacterial lipopolysaccharide, phorbol 12-myristate 13-acetate plus ionomycin, or CD40 ligand led to a five-fold to 35-fold decrease in BCL-6 mRNA levels. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 anti-IgM anti-Igm NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IgD igd NOUN NN Number=Sing _ _ _ _ 10 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 13 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 plus plus CCONJ CC _ _ _ _ _ 23 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 27 ligand ligand PROPN NNP Number=Sing _ _ _ _ 28 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 five five NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 fold fold NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fold fold NOUN NN Number=Sing _ _ _ _ 38 decrease decrease NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ _ 43 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 44 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1139 # text = Similar downregulation of BCL-6 mRNA was seen in human B cells stimulated with Staphylococcus aureus plus interleukin-2 or anti-IgM antibodies and in human T lymphocytes stimulated with phytohemagglutinin. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 Staphylococcus Staphylococcus PROPN NNP Number=Sing _ _ _ _ 17 aureus aureus NOUN NN Number=Sing _ _ _ _ 18 plus plus CCONJ CC _ _ _ _ _ 19 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 anti-IgM anti-Igm ADJ JJ Degree=Pos _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1140 # text = BCL-6 mRNA levels began to decrease 8 to 16 hours after stimulation, before cells entered S phase. 1 BCL Bcl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 began begin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 9 8 8 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 16 16 NUM CD NumType=Card _ _ _ _ 12 hours hour NOUN NNS Number=Plur _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 before before SCONJ IN _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 entered enter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 S s PROPN NNP Number=Sing _ _ _ _ 20 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1141 # text = Although polyclonal activation of B cells in vitro invariably decreased BCL-6 MRNA expression, activated B cells from human germinal centers expressed BCL-6 mRNA at levels comparable to the levels in resting B cells. 1 Although although SCONJ IN _ _ _ _ _ 2 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro PROPN NNP Number=Sing _ _ _ _ 9 invariably invariably ADV RB _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 MRNA MRNa PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 23 centers center NOUN NNS Number=Plur _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 6 6 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 in in SCONJ IN _ _ _ _ _ 36 resting rest VERB VBG VerbForm=Ger _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1142 # text = Despite these similar mRNA levels, BCL-6 protein expression was threefold to 34-fold higher in germinal center B cells than in resting B cells, suggesting that BCL-6 protein levels are controlled by translational or posttranslational mechanisms. 1 Despite despite ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 similar similar ADJ JJ Degree=Pos _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 threefold threefold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 34 34 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 higher higher ADV RBR Degree=Cmp _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 21 center center NOUN NN Number=Sing _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 resting rest VERB VBG VerbForm=Ger _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 levels level NOUN NNS Number=Plur _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 translational translational ADJ JJ Degree=Pos _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 43 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1143 # text = These observations suggest that the germinal center reaction provides unique activation signals to B cells that allow for continued, high-level BCL-6 expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 7 center center NOUN NN Number=Sing _ _ _ _ 8 reaction reaction NOUN NN Number=Sing _ _ _ _ 9 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unique unique ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 allow allow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 continued continue VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 level level NOUN NN Number=Sing _ _ _ _ 24 BCL Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1144 # text = Document 00300119 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300119 00300119 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1145 # text = Involvement of an SAF-like transcription factor in the activation of serum amyloid A gene in monocyte/macrophage cells by lipopolysaccharide. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 SAF SAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 like like ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ _ 14 amyloid amyloid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1146 # text = Serum amyloid A (SAA) has been linked to atherosclerosis because of its ability to remodel high-density lipoprotein by the depletion of apolipoprotein A1, its ability to bind cholesterol, and its presence in the atherosclerotic plaques of coronary and carotid arteries. 1 Serum Serum NOUN NN Number=Sing _ _ _ _ 2 amyloid amyloid NOUN NN Number=Sing _ _ _ _ 3 A a PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SAA SAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 because because ADP IN _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 remodel remodel VERB VB VerbForm=Inf _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 density density NOUN NN Number=Sing _ _ _ _ 21 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 depletion depletion NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 apolipoprotein apolipoprotein NOUN NN Number=Sing _ _ _ _ 27 A1 A1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 bind bind VERB VB VerbForm=Inf _ _ _ _ 33 cholesterol cholesterol NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 37 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 presence presence NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 42 plaques plaque NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 coronary coronary NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 carotid carotid NOUN NN Number=Sing _ _ _ _ 47 arteries artery NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1147 # text = In the present study, we investigated the induction mechanism of SAA gene in THP-1 monocyte/macrophage cells which play a critical role in the development of atherosclerotic fatty streak and plaque formation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 SAA SAA PROPN NNP Number=Sing _ _ _ _ 13 gene gene PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 critical critical ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 32 fatty fatty NOUN NN Number=Sing _ _ _ _ 33 streak streak NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 plaque plaque NOUN NN Number=Sing _ _ _ _ 36 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1148 # text = We and others have shown that SAA gene is induced in monocyte/macrophage cells by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 others other NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 SAA SAa PROPN NNP Number=Sing _ _ _ _ 8 gene gene PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1149 # text = By promoter function analysis, we show that the SAA promoter sequence between -280 and -226 can confer LPS responsiveness. 1 By by ADP IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 SAA SAA NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 280 280 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 226 226 NUM CD NumType=Card _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 confer confer VERB VB VerbForm=Inf _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ _ 22 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1150 # text = Gel electrophoretic mobility shift assay detected an induced DNA-binding activity in these cells in response to LPS. 1 Gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1151 # text = Characterization of the DNA-binding protein by UV cross-linking, Southwestern blot, and antibody ablation/supershift assays revealed that it is similar to a recently reported nuclear factor designated SAF. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 UV UV PROPN NNP Number=Sing _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 14 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 18 ablation ablation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 supershift supershift NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 similar similar ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 recently recently ADV RB _ _ _ _ _ 30 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 SAF SAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1152 # text = These results demonstrated that LPS-mediated SAA gene induction in monocyte/macrophage cells is primarily due to the induction of SAF activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 SAA SAa PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 primarily primarily ADV RB _ _ _ _ _ 18 due due ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 SAF SAF PROPN NNP Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1153 # text = Document 00300120 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300120 00300120 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1154 # text = The spatial distribution of human immunoglobulin genes within the nucleus: 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 spatial spatial ADJ JJ Degree=Pos _ _ _ _ 3 distribution distribution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ # sent_id = 1155 # text = evidence for gene topography independent of cell type and transcriptional activity. 1 evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 gene gene ADJ JJ Degree=Pos _ _ _ _ 4 topography topography NOUN NN Number=Sing _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1156 # text = The three-dimensional positioning of immunoglobulin 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dimensional dimensional ADJ JJ Degree=Pos _ _ _ _ 5 positioning positioning NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 1157 # text = (Ig) genes within the nucleus of human cells was investigated using in situ hybridization and confocal microscopy. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 situ situ NOUN NN Number=Sing _ _ _ _ 16 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 19 microscopy microscopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1158 # text = The visualization of heavy and light chain genes in B-lymphoid cells showed that the three 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 visualization visualization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 light light ADJ JJ Degree=Pos _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 three three NUM CD NumType=Card _ _ _ _ # sent_id = 1159 # text = Ig genes are differentially and nonrandomly distributed in different nuclear subvolumes: the kappa genes were found to be preferentially confined to an outer nuclear volume, whereas the gamma and lambda genes consistently occupied more central positions within the nucleus, the lambda genes being more interior when compared with the gamma genes. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 differentially differentially ADV RB _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 nonrandomly nonrandomly ADV RB _ _ _ _ _ 7 distributed distribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 subvolumes subvolume NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 preferentially preferentially ADV RB _ _ _ _ _ 21 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 outer outer ADJ JJ Degree=Pos _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 volume volume NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 whereas whereas SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 lambda lambda NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 consistently consistently ADV RB _ _ _ _ _ 35 occupied occupy VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 more more ADV RBR _ _ _ _ _ 37 central central ADJ JJ Degree=Pos _ _ _ _ 38 positions position NOUN NNS Number=Plur _ _ _ _ 39 within within ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 lambda lambda NOUN NN Number=Sing _ _ _ _ 45 genes gene NOUN NNS Number=Plur _ _ _ _ 46 being be AUX VBG VerbForm=Ger _ _ _ _ 47 more more ADV RBR _ _ _ _ _ 48 interior interior ADJ JJ Degree=Pos _ _ _ _ 49 when when ADV WRB PronType=Int _ _ _ _ 50 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 gamma gamma NOUN NN Number=Sing _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1160 # text = The data further show that these overall topographical distributions are independent of gene transcriptional activity and are conserved in different cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 overall overall ADJ JJ Degree=Pos _ _ _ _ 8 topographical topographical ADJ JJ Degree=Pos _ _ _ _ 9 distributions distribution NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 independent independent ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene PRON NN Number=Sing _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1161 # text = Although subtle gene movements within those defined topographical regions cannot be excluded by this study, the results indicate that tissue specificity of gene expression is not accompanied by drastic changes in gene nuclear topography, rather suggesting that gene organization within the nucleus may be primarily dependent on structural constraints imposed on the respective chromosomes. 1 Although although SCONJ IN _ _ _ _ _ 2 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 movements movement NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 topographical topographical ADJ JJ Degree=Pos _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 11 not not PART RB _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 excluded exclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 23 specificity specificity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 drastic drastic ADJ JJ Degree=Pos _ _ _ _ 32 changes change NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 gene gene ADJ JJ Degree=Pos _ _ _ _ 35 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 36 topography topography NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 rather rather ADV RB _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 gene gene ADJ JJ Degree=Pos _ _ _ _ 42 organization organization NOUN NN Number=Sing _ _ _ _ 43 within within ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 46 may may AUX MD VerbForm=Fin _ _ _ _ 47 be be AUX VB VerbForm=Inf _ _ _ _ 48 primarily primarily ADV RB _ _ _ _ _ 49 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 structural structural ADJ JJ Degree=Pos _ _ _ _ 52 constraints constraint NOUN NNS Number=Plur _ _ _ _ 53 imposed impose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 on on ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 respective respective ADJ JJ Degree=Pos _ _ _ _ 57 chromosomes chromosome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1162 # text = Document 00300121 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300121 00300121 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1163 # text = V3 loop of human immunodeficiency virus type 1 suppresses interleukin 2-induced T cell growth [published erratum appears in AIDS Res Hum Retroviruses 1997 May 1;13(7):633] 1 V3 V3 NUM CD NumType=Card _ _ _ _ 2 loop loop NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 10 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 erratum erratum NOUN NN Number=Sing _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AIDS aids NOUN NN Number=Sing _ _ _ _ 23 Res res NOUN NNS Number=Plur _ _ _ _ 24 Hum Hum PROPN NNP Number=Sing _ _ _ _ 25 Retroviruses Retroviruse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 1997 1997 NUM CD NumType=Card _ _ _ _ 27 May May PROPN NNP Number=Sing _ _ _ _ 28 1;13 1;13 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 :633 :633 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1164 # text = We tested the effect of three linear or two loop peptides derived from the V3 region of the HTLV-III BH10 clone or the SF2 strain of human immunodeficiency virus type 1 on IL-2-driven T cell proliferation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 three three NUM CD NumType=Card _ _ _ _ 7 linear linear NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 loop loop ADJ JJ Degree=Pos _ _ _ _ 11 peptides peptide NOUN NNS Number=Plur _ _ _ _ 12 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 V3 V3 NUM CD NumType=Card _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 III iii NUM CD NumType=Card _ _ _ _ 22 BH10 BH10 NUM CD NumType=Card _ _ _ _ 23 clone clone NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 SF2 Sf2 NOUN NN Number=Sing _ _ _ _ 27 strain strain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 31 virus virus NOUN NN Number=Sing _ _ _ _ 32 type type NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1165 # text = V3-BH10, which consists of 42 amino acids and has a loop structure, suppressed IL-2-driven proliferation of all IL-2-dependent cells [Kit225, ED-40515(+), KT-3, 7-day PHA-blasts, and fresh peripheral blood mononuclear cells] tested, whereas it did not suppress the cell growth of IL-2-independent cell lines (Hut102, Molt-4, and Jurkat). 1 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -BH10 -BH10 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 42 42 NUM CD NumType=Card _ _ _ _ 8 amino amino ADJ JJ Degree=Pos _ _ _ _ 9 acids acid NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 loop loop NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 all all DET DT _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 225 225 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 ED-40515 ED-40515 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 (+) (+) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 KT KT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 day day NOUN NN Number=Sing _ _ _ _ 44 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 50 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 51 blood blood NOUN NN Number=Sing _ _ _ _ 52 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 ] ] PUNCT -RRB- _ _ _ _ _ 55 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 whereas whereas SCONJ IN _ _ _ _ _ 58 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 59 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 60 not not PART RB _ _ _ _ _ 61 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 cell cell NOUN NN Number=Sing _ _ _ _ 64 growth growth NOUN NN Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 independent independent ADJ JJ Degree=Pos _ _ _ _ 71 cell cell NOUN NN Number=Sing _ _ _ _ 72 lines line NOUN NNS Number=Plur _ _ _ _ 73 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 74 Hut Hut PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 102 102 NUM CD NumType=Card _ _ _ SpaceAfter=No 76 , , PUNCT , _ _ _ _ _ 77 Molt Molt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 78 - - SYM SYM _ _ _ _ SpaceAfter=No 79 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 80 , , PUNCT , _ _ _ _ _ 81 and and CCONJ CC _ _ _ _ _ 82 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 83 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 84 . . PUNCT . _ _ _ _ _ # sent_id = 1166 # text = This suppressive effect was also seen in IL-2-driven cell growth of CD8-positive lymphocytes purified from 7-day PHA-blasts, indicating that CD4 molecules were not required for the suppression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 positive positive ADJ JJ Degree=Pos _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 day day NOUN NN Number=Sing _ _ _ _ 25 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 32 molecules molecule NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1167 # text = The treatment with anti-V3 loop monoclonal antibody (902 antibody) completely abolished the suppressive effect of V3-BH10. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 anti anti X AFX _ _ _ _ SpaceAfter=No 5 -V3 -V3 NUM CD NumType=Card _ _ _ _ 6 loop loop NOUN NN Number=Sing _ _ _ _ 7 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 8 antibody antibody NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 902 902 NUM CD NumType=Card _ _ _ _ 11 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 V3- v3- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 BH10 BH10 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1168 # text = In addition, V3-BH10 generated the arrest of Kit225 cells and also purified CD8-positive lymphocytes in G1 phase in the presence of IL-2. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 arrest arrest NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Kit225 Kit225 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 G1 g1 PROPN NNP Number=Sing _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1169 # text = Neither chromatin condensation nor DNA fragmentation was detected in Kit225 cells cultured with V3-BH10 and IL-2. 1 Neither neither DET DT _ _ _ _ _ 2 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 3 condensation condensation NOUN NN Number=Sing _ _ _ _ 4 nor nor CCONJ CC _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 225 225 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 V3- v3- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 BH10 BH10 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1170 # text = V3-BH10 neither blocked radiolabeled IL-2 binding to IL-2 receptors nor affected tyrosyl phosphorylation of several cellular proteins (p120, p98, p96, p54, and p38), which is immediately induced by IL-2 stimulation. 1 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 neither neither NOUN NN Number=Sing _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 radiolabeled radiolabel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 tyrosyl tyrosyl NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 several several ADJ JJ Degree=Pos _ _ _ _ 23 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 p120 p120 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 p98 p98 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 p96 p96 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 p54 p54 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 p38 p38 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 immediately immediately ADV RB _ _ _ _ _ 41 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1171 # text = However, V3-BH10 enhanced IL-2-induced mRNA expression of c-fos but not c-myc or junB. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 myc myc ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 junB junb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1172 # text = Thus, the binding of V3 loop of gp120 to the cell surface molecule(s) appears to affect intracellular IL-2 signaling, which leads to the suppression of IL-2-induced T cell growth. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 binding binding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 V3 V3 NUM CD NumType=Card _ _ _ _ 7 loop loop NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 gp120 gp120 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 s s X AFX _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 suppression suppression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1173 # text = Document 00300122 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300122 00300122 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1174 # text = Interleukin 6-induced differentiation of a human B cell line into IgM-secreting plasma cells is mediated by c-fos. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 IgM Igm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 secreting secreting ADJ JJ Degree=Pos _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1175 # text = The role of the protooncogene c-fos in interleukin (IL) 6-induced B cell differentiation was assessed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 6 c- c- PUNCT , _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1176 # text = Treatment of SKW 6.4 cells with IL 6 induced a transient and early stimulation of c-fos sense mRNA expression. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SKW SKW PROPN NNP Number=Sing _ _ _ _ 4 6.4 6.4 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fos fos NOUN NN Number=Sing _ _ _ _ 19 sense sense NOUN NN Number=Sing _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1177 # text = The effect appeared within 30 min and returned to basal levels after 2 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 30 30 NUM CD NumType=Card _ _ _ _ 6 min min NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1178 # text = The addition of antisense oligonucleotides to c-fos significantly inhibited IL 6-induced IgM production by SKW 6.4 cells (p less than 0.001), whereas control oligonucleotides had no inhibitory effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 5 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NNS Number=Plur _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IgM Igm NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 SKW SKW PROPN NNP Number=Sing _ _ _ _ 20 6.4 6.4 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 p p NOUN NN Number=Sing _ _ _ _ 24 less less ADV RBR Degree=Cmp _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 whereas whereas SCONJ IN _ _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 32 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1179 # text = These results indicate that activation of c-fos is involved in IL 6-induced differentiation of SKW 6.4 cells into IgM-secreting cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fos NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ _ 14 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SKW SKW PROPN NNP Number=Sing _ _ _ _ 20 6.4 6.4 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 IgM Igm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 secreting secreting ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1180 # text = Document 00300123 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300123 00300123 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1181 # text = Tissue-specific expression of the platelet GPIIb gene. 1 Tissue Tissue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 platelet platelet NOUN NN Number=Sing _ _ _ _ 8 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ _ 9 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1182 # text = One of the major objectives in the study of thrombogenesis is to determine the mechanisms by which a hematopoietic progenitor is activated and committed to the megakaryocytic lineage. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 objectives objective NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 study study NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thrombogenesis thrombogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 determine determine VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 which which DET WDT PronType=Int _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 committed committed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 28 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1183 # text = Recent development of primary cultures of human megakaryocytes and the molecular cloning of genes that are specific to this lineage offer the possibility of getting some insights into the genetic mechanisms that control megakaryocytopoiesis. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 12 cloning cloning NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 possibility possibility NOUN NN Number=Sing _ _ _ _ 24 of of SCONJ IN _ _ _ _ _ 25 getting get VERB VBG VerbForm=Ger _ _ _ _ 26 some some DET DT _ _ _ _ _ 27 insights insight NOUN NNS Number=Plur _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 31 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 megakaryocytopoiesis megakaryocytopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1184 # text = One gene of interest is the glycoprotein IIb (GPIIb) gene; GPIIb, the alpha subunit of the platelet cytoadhesin GPIIb-IIIa, is produced in megakaryocytes at an early stage of the differentiation, whereas the other subunit of this complex, GPIIIa, is expressed in other cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interest interest NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 8 IIb IIb PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 platelet platelet NOUN NN Number=Sing _ _ _ _ 22 cytoadhesin cytoadhesin ADP IN _ _ _ _ _ 23 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 IIIa IIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 early early ADJ JJ Degree=Pos _ _ _ _ 34 stage stage NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 whereas whereas SCONJ IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 other other ADJ JJ Degree=Pos _ _ _ _ 42 subunit subunit NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 GPIIIa GPIIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 other other ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 1185 # text = For these reasons, the 5'-flanking region of the GPIIb gene was used to identify the regions that interact with DNA-binding nuclear factors. 1 For for ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 reasons reason NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ _ 14 gene gene PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 identify identify VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 regions region NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1186 # text = A fragment extending from -643 to +33 is capable of controlling the tissue-specific expression of the CAT gene in transfection experiments. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 fragment fragment NOUN NN Number=Sing _ _ _ _ 3 extending extend VERB VBG VerbForm=Ger _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 643 643 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 +33 +33 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 capable capable ADJ JJ Degree=Pos _ _ _ _ 11 of of SCONJ IN _ _ _ _ _ 12 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CAT cat PROPN NNP Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 transfection transfection NOUN NN Number=Sing _ _ _ _ 24 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1187 # text = Within this region, we have identified several sequences that are implicated in DNA protein interactions as shown in DNAse I footprints and gel mobility shift assays. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 interactions interaction NOUN NNS Number=Plur _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 DNAse DNAse NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 footprints footprint NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1188 # text = One region, centered at -54, is similar to a nuclear factor E1-binding site, and a region located at position -233 contains a CCAAT motif. 1 One one NUM CD NumType=Card _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 54 54 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 E1 e1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 position position NOUN NN Number=Sing _ _ _ _ 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 233 233 NUM CD NumType=Card _ _ _ _ 28 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 31 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1189 # text = Two domains centered at positions -345 and -540, respectively, bind proteins that are present in megakaryocytic cells and nonrelated cells as well. 1 Two two NUM CD NumType=Card _ _ _ _ 2 domains domain NOUN NNS Number=Plur _ _ _ _ 3 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 positions position NOUN NNS Number=Plur _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 345 345 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 540 540 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 bind bind ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 nonrelated nonrelate ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1190 # text = Finally, two other domains, located at positions -460 and -510, interact with proteins that are only present in megakaryocytic cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 positions position NOUN NNS Number=Plur _ _ _ _ 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 460 460 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 510 510 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 interact interact NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 present present ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1191 # text = In addition, deletion of the region containing these two domains results in a significant decrease of the promoter activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 domains domain NOUN NNS Number=Plur _ _ _ _ 12 results result NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 decrease decrease NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1192 # text = It is very likely that these domains bind megakaryocyte-specific nuclear proteins acting as positive transcription factors. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 very very ADV RB _ _ _ _ _ 4 likely likely ADJ JJ Degree=Pos _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 domains domain NOUN NNS Number=Plur _ _ _ _ 8 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 megakaryocyte megakaryocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 acting act VERB VBG VerbForm=Ger _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 positive positive ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1193 # text = Document 00300124 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300124 00300124 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1194 # text = HIV-1 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 1195 # text = Nef protein inhibits the recruitment of AP-1 DNA-binding activity in human T-cells. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1196 # text = The human immunodeficiency virus type 1 long terminal repeat, HIV-1-LTR, contains binding sites for several cellular transcription factors which contribute to HIV-1 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1197 # text = Our previous studies on the function of the HIV-1-encoded Nef protein suggested that Nef may be an inhibitor HIV-1 transcription. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Nef Nef PROPN NNP Number=Sing _ _ _ _ 15 protein protein PROPN NNP Number=Sing _ _ _ _ 16 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 Nef Nef PROPN NNP Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 inhibitor inhibitor ADJ JJ Degree=Pos _ _ _ _ 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1198 # text = To determine whether Nef affects the binding of cellular factors implicated in HIV-1 regulation, 32P-labeled oligonucleotides corresponding to the binding sites were incubated with nuclear extracts prepared from Nef-expressing T-cell lines that were not stimulated or were stimulated with T-cell mitogens. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 Nef Nef PROPN NNP Number=Sing _ _ _ _ 5 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 32P 32p NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 22 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 extracts extract NOUN NNS Number=Plur _ _ _ _ 32 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 37 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ _ 40 that that PRON WDT PronType=Rel _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 not not PART RB _ _ _ _ _ 43 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 1199 # text = We found that Nef inhibited the recruitment of AP-1 DNA-binding activity in mitogen-stimulated human T-cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Nef Nef PROPN NNP Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1200 # text = Additionally, 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ # sent_id = 1201 # text = Nef expressing cells were transiently transfected with a plasmid in which HIV-1 AP-1 DNA recognition sequences were cloned downstream of the chloramphenicol acetyltransferase (CAT) gene. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 expressing expressing ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 transiently transiently ADV RB _ _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 recognition recognition NOUN NN Number=Sing _ _ _ _ 20 sequences sequence NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 downstream downstream NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 27 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1202 # text = Mitogen-mediated transcriptional activation of the CAT gene in this construct was inhibited in Nef-expressing cells but not in control cells. 1 Mitogen Mitogen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CAT cat PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1203 # text = These studies suggest that, by inhibiting AP-1 activation, Nef may play a role in regulating HIV-1 gene expression in infected T-cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 inhibiting inhibiting VERB VBG VerbForm=Ger _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Nef Nef PROPN NNP Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 infected infect ADJ JJ Degree=Pos _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1204 # text = Document 00300125 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300125 00300125 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1205 # text = Synergism between two distinct elements of the HTLV-I enhancer during activation by the trans-activator of HTLV-I. 1 Synergism Synergism NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1206 # text = We have conducted functional studies of the enhancer elements of human T-cell leukemia virus type I (HTLV-I) using the human T-cell lines Jurkat and MOLT 4, which are negative for HTLV-I, and MT-2 and TL-Mor, which carry the proviral genome of HTLV-I. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 conducted conduct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 MOLT MOLT PROPN NNP Number=Sing _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 negative negative ADJ JJ Degree=Pos _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 MT Mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 TL Tl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 Mor Mor PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 which which PRON WDT PronType=Rel _ _ _ _ 52 carry carry VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 55 genome genome NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 1207 # text = Two distinct elements have been implicated in function of the HTLV-I enhancer. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1208 # text = One is the 21-base-pair (bp) core element that is responsible for trans-activation by the HTLV-I trans-activator p40tax and that has the ability to bind to cyclic-AMP responsive element binding factor (CREB)-like factor(s). 1 One one PRON PRP _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 pair pair NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 core core NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 activator activator NOUN NN Number=Sing _ _ _ _ 28 p40tax p40tax NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ability ability NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 bind bind VERB VB VerbForm=Inf _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 cyclic cyclic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AMP Amp NOUN NN Number=Sing _ _ _ _ 40 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ _ 42 binding bind VERB VBG VerbForm=Ger _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 like like ADP IN _ _ _ _ _ 49 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 s s X AFX _ _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1209 # text = The other is a region interposed between the 21-bp elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 interposed interpose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1210 # text = In this study we demonstrate that a subfragment (C26) in the region between the 21-bp elements is involved in trans-activation by p40tax, possibly through binding to an NF-kappa B-like nuclear factor or factors. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 subfragment subfragment NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 C26 c26 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 bp bp NOUN NN Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 trans-activation trans-activation NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 possibly possibly ADV RB _ _ _ _ _ 29 through through SCONJ IN _ _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 like like ADP IN _ _ _ _ _ 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1211 # text = Formation of the protein-DNA complex with the C26 subfragment was positively affected by p40tax. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 C26 c26 NOUN NN Number=Sing _ _ _ _ 11 subfragment subfragment NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 positively positively ADV RB _ _ _ _ _ 14 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1212 # text = The C26 element conferred partial responsiveness to p40tax when linked to one copy of the 21-bp element that, by itself, showed little activation in response to p40tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C26 c26 PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 partial partial ADJ JJ Degree=Pos _ _ _ _ 6 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 p40tax p40tax VERB VB VerbForm=Inf _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 copy copy NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 little little ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1213 # text = However, the C26 element alone, even when repeated, could not be activated by p40tax, unlike other NF-kappa B-binding elements. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 C26 c26 PROPN NNP Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 even even ADV RB _ _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 repeated repeate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 unlike unlike ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1214 # text = In contrast, the C26 element itself was profoundly activated upon stimulation with 12-O-tetradecanoylphorbol-13-acetate. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 C26 c26 PROPN NNP Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 profoundly profoundly ADV RB _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -acetate -acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1215 # text = These findings therefore suggest that the HTLV-I enhancer contains multiple functional elements, including binding sites for at least CREB- and NF-kappa B-like factors, which synergistically cooperate in activation of the HTLV-I enhancer in response to p40tax. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 at at ADV RB _ _ _ _ _ 21 least least ADV RBS Degree=Sup _ _ _ _ 22 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 like like ADP IN _ _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 synergistically synergistically ADV RB _ _ _ _ _ 35 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 43 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 response response NOUN NN Number=Sing _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1216 # text = Our results also demonstrate that TPA-dependent activation of the HTLV-I enhancer may be mediated through the C26 element. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 TPA TPa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 C26 c26 NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1217 # text = Document 00300126 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300126 00300126 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1218 # text = Regulation of sialoadhesin expression on rat macrophages. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 1219 # text = Induction by glucocorticoids and enhancement by IFN-beta, IFN-gamma, IL-4, and lipopolysaccharide. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1220 # text = Sialoadhesin is a macrophage-restricted member of the Ig superfamily that mediates adhesion with lymphoid and myeloid cells. 1 Sialoadhesin Sialoadhesin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 member member NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Ig ig PROPN NNP Number=Sing _ _ _ _ 11 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1221 # text = It is expressed on a subpopulation of macrophages in lymphoid tissues and in chronic inflammation (e.g., during autoimmune diseases). 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 subpopulation subpopulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 21 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1222 # text = We have studied the regulation of sialoadhesin expression in vitro and show that glucocorticoids (GC) induce sialoadhesin expression on freshly isolated rat macrophages and the rat macrophage cell line R2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 induce induce NOUN NN Number=Sing _ _ _ _ 19 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 freshly freshly ADV RB _ _ _ _ _ 23 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 rat rat NOUN NN Number=Sing _ _ _ _ 25 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 rat rat NOUN NN Number=Sing _ _ _ _ 29 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 R2 r2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1223 # text = The cytokines IFN-beta, IFN-gamma, IL-4, and LPS, although unable to induce sialoadhesin expression by themselves, were able to enhance GC-mediated induction of sialoadhesin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 sialoadhesin sialoadhesin ADP IN _ _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 themselves themself PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 able able ADJ JJ Degree=Pos _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 31 GC Gc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1224 # text = Sialoadhesin expression was functional as shown by cell adhesion assays with human RBCs. 1 Sialoadhesin Sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 RBCs RBC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1225 # text = Northern blotting experiments indicated that regulation predominantly occurred at the mRNA level. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 predominantly predominantly ADV RB _ _ _ _ _ 8 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1226 # text = Comparison of the different combinations of GC and cytokines/LPS revealed differences in the level of GC-dependent enhancement of sialoadhesin expression, with IFN-beta and IL-4 being more potent than IFN-gamma and LPS. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 combinations combination NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GC Gc NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 LPS Lp NOUN NNS Number=Plur _ _ _ _ 12 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 beta beta PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 being be AUX VBG VerbForm=Ger _ _ _ _ 35 more more ADV RBR _ _ _ _ _ 36 potent potent ADJ JJ Degree=Pos _ _ _ _ 37 than than ADP IN _ _ _ _ _ 38 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 gamma gamma PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1227 # text = Moreover, the effects of IFN-gamma and LPS could be reproduced by priming, whereas IFN-beta and IL-4 were required simultaneously with GC. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 priming priming NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 simultaneously simultaneously ADV RB _ _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1228 # text = The regulation of sialoadhesin expression was mediated by the GC receptor, and not by mineralocorticoid receptor, as shown by inhibition experiments with specific antagonists. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GC GC PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 mineralocorticoid mineralocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 experiments experiment NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1229 # text = Finally, it is demonstrated that macrophages in the adrenal gland, the major site of endogenous GC production, express sialoadhesin. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 11 gland gland NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 18 GC GC PROPN NNP Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 express express ADJ JJ Degree=Pos _ _ _ _ 22 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1230 # text = This study demonstrates that GC act as a primary inducer of sialoadhesin expression on rat macrophages, and that the response can be enhanced by IFN-beta, T cell-derived cytokines, or LPS. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GC Gc PROPN NNP Number=Sing _ _ _ _ 6 act act NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 inducer inducer NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 rat rat NOUN NN Number=Sing _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1231 # text = Document 00300127 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300127 00300127 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1232 # text = Transcription factor activation in lymphokine activated killer cells and lymphocytes from patients receiving IL-2 immunotherapy. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 killer killer NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 receiving receive VERB VBG VerbForm=Ger _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1233 # text = Administration of the cytokine interleukin-2 (IL-2) can result in therapeutic benefits for individuals with renal cell carcinoma and melanoma. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 17 benefits benefit NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 renal renal ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 melanoma melanoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1234 # text = Here we report an analysis of the transcription factor families AP-1, Sp1, NF-kappaB, and signal transducers and activators of transcription (STAT) in cancer patients' lymphocytes before and after IL-2 immunotherapy, as assessed by a gel-shift assay. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 families family NOUN NNS Number=Plur _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Sp1 Sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 signal signal ADJ JJ Degree=Pos _ _ _ _ 23 transducers transducer NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 activators activator NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cancer cancer NOUN NN Number=Sing _ _ _ _ 33 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ' 's PUNCT '' _ _ _ _ _ 35 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 36 before before ADP IN _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 after after ADP IN _ _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 as as SCONJ IN _ _ _ _ _ 45 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 shift shift NOUN NN Number=Sing _ _ _ _ 51 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 1235 # text = An in vitro surrogate of IL-2 immunotherapy is the incubation of fresh peripheral blood mononuclear cells (PBMC) from healthy individuals in IL-2 for several days, resulting in the production of lymphokine-activated killer (LAK) activity in these cultures. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 4 surrogate surrogate NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 incubation incubation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 several several ADJ JJ Degree=Pos _ _ _ _ 31 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 resulting result VERB VBG VerbForm=Ger _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 killer killer NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 LAK LAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1236 # text = One purpose of this study was to describe the profile of transcription factor activation in these different populations, and assess whether the patterns observed correlated with functional differences in these cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 describe describe VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 profile profile NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 assess assess NOUN NN Number=Sing _ _ _ _ 22 whether whether SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 patterns pattern NOUN NNS Number=Plur _ _ _ _ 25 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 functional functional ADJ JJ Degree=Pos _ _ _ _ 29 differences difference NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1237 # text = Prior to in vivo IL-2 administration, the typical binding pattern of transcription factors in PBMC from patients resembled that seen in fresh PBMC from healthy individuals. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vivo vivo PROPN NNP Number=Sing _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 administration administration NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 typical typical ADJ JJ Degree=Pos _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 pattern pattern NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 resembled resemble VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 26 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 29 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1238 # text = Over a 3-week course of IL-2 therapy, in most patients the binding patterns of AP-1 , Sp1, and NF-kappaB proteins changed to resemble those seen in PBMC activated by IL-2 in vitro. 1 Over over ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 week week NOUN NN Number=Sing _ _ _ _ 6 course course NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 most most ADJ JJS Degree=Sup _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 patterns pattern NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 , , PUNCT , _ _ _ _ _ 24 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 changed chang VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 resemble resemble VERB VB VerbForm=Inf _ _ _ _ 34 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1239 # text = However, the cells obtained from IL-2-treated patients did not have low-level constitutive expression of STAT binding factors as did LAK cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 have have VERB VB VerbForm=Inf _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 level level NOUN NN Number=Sing _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 STAT Stat SCONJ IN _ _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 LAK LAK PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1240 # text = When these patient cells were further stimulated by IL-2 in vitro, additional differences in STAT induction patterns were noted. 1 When when ADV WRB PronType=Int _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 patient patient ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 further further ADV RB _ _ _ _ _ 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 additional additional ADJ JJ Degree=Pos _ _ _ _ 16 differences difference NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 patterns pattern NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1241 # text = These data provide further information on the molecular events occurring in immune cells generated through in vivo and in vitro administration of IL-2, and further document that there is not a precise congruence between PBMC activated in vivo and in vitro by IL-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADJ JJ Degree=Pos _ _ _ _ 5 information information NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 21 administration administration NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 further further ADJ JJ Degree=Pos _ _ _ _ 29 document document NOUN NN Number=Sing _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 there there PRON EX _ _ _ _ _ 32 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 precise precise ADJ JJ Degree=Pos _ _ _ _ 36 congruence congruence NOUN NN Number=Sing _ _ _ _ 37 between between ADP IN _ _ _ _ _ 38 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 39 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 vivo vivo NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 vitro vitro NOUN NN Number=Sing _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1242 # text = Document 00300128 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300128 00300128 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1243 # text = A family of serine proteases expressed exclusively in myelo-monocytic cells specifically processes the nuclear factor-kappa 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 serine serine NOUN NN Number=Sing _ _ _ _ 5 proteases protease NOUN NNS Number=Plur _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 exclusively exclusively ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 myelo myelo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 processes process VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 1244 # text = B subunit p65 in vitro and may impair human immunodeficiency virus replication in these cells. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 p65 p65 NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 impair impair VERB VB VerbForm=Inf _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1245 # text = Two groups of U937 promonocytic cells were obtained by limiting dilution cloning which differed strikingly in their ability to support human immunodeficiency virus 1 (HIV-1) replication. 1 Two two NUM CD NumType=Card _ _ _ _ 2 groups group NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 limiting limite VERB VBG VerbForm=Ger _ _ _ _ 11 dilution dilution NOUN NN Number=Sing _ _ _ _ 12 cloning cloning NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 strikingly strikingly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 support support VERB VB VerbForm=Inf _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1246 # text = "Plus" clones replicated the virus efficiently, whereas "minus" clones did not. 1 " " PUNCT `` _ _ _ _ SpaceAfter=No 2 Plus plus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 " " PUNCT '' _ _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 replicated replicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 efficiently efficiently ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 whereas whereas SCONJ IN _ _ _ _ _ 11 " " PUNCT `` _ _ _ _ SpaceAfter=No 12 minus minus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 " " PUNCT '' _ _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1247 # text = We examined these clones for differences in nuclear factor (NF)-kappa B activity which might account for the observed phenomenon. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 might might AUX MD VerbForm=Fin _ _ _ _ 19 account account VERB VB VerbForm=Inf _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 observed observed ADJ JJ Degree=Pos _ _ _ _ 23 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1248 # text = Stimulation of plus clones liberated the classical p50-p65 complex from cytoplasmic pools, whereas minus clones produced an apparently novel, faster-migrating complex, as judged by electrophoretic mobility shift assays. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 plus plus CCONJ CC _ _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 liberated liberate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 classical classical ADJ JJ Degree=Pos _ _ _ _ 8 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 p65 p65 NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 pools pool NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas wherea SCONJ IN _ _ _ _ _ 17 minus minus ADJ JJ Degree=Pos _ _ _ _ 18 clones clone NOUN NNS Number=Plur _ _ _ _ 19 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 apparently apparently ADV RB _ _ _ _ _ 22 novel novel ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 migrating migrating NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 33 mobility mobility NOUN NN Number=Sing _ _ _ _ 34 shift shift NOUN NN Number=Sing _ _ _ _ 35 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1249 # text = It is surprising that the faster-migrating complex was composed also of p50 and p65. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 surprising surprising ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 migrating migrating NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1250 # text = However, the p65 subunit was COOH-terminally truncated, as shown by immunoprecipitation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 subunit subunit NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 COOH COOH ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 terminally terminally ADV RB _ _ _ _ _ 10 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1251 # text = The truncation resulted from limited proteolysis of p65 during cellular extraction which released particular lysosomal serine proteases, such as elastase, cathepsin G, and proteinase 3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 truncation truncation NOUN NN Number=Sing _ _ _ _ 3 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 limited limited ADJ JJ Degree=Pos _ _ _ _ 6 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p65 p65 NUM CD NumType=Card _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 extraction extraction NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 particular particular ADJ JJ Degree=Pos _ _ _ _ 15 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ _ 17 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 elastase elastase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 24 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 proteinase proteinase NOUN NN Number=Sing _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1252 # text = These specific proteases are coordinately expressed and were present exclusively in the minus U937 clones, but not in the plus clones, as demonstrated in the case of cathepsin G. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 proteases protease NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 coordinately coordinately ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 exclusively exclusively ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minus minus ADJ JJ Degree=Pos _ _ _ _ 14 U937 U937 NOUN NN Number=Sing _ _ _ _ 15 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 plus plus ADJ JJ Degree=Pos _ _ _ _ 22 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 31 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1253 # text = In addition, these proteases were detected in certain subclones of THP-1 and HL-60 cells and in primary monocytes, in each case correlating with the truncated from of p65. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteases protease NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 certain certain ADJ JJ Degree=Pos _ _ _ _ 10 subclones subclone NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 60 60 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 each each DET DT _ _ _ _ _ 27 case case NOUN NN Number=Sing _ _ _ _ 28 correlating correlat VERB VBG VerbForm=Ger _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1254 # text = We demonstrate in vitro cleavage of p65 by purified elastase and cathepsin G. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p65 p65 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 elastase elastase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 13 G g NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1255 # text = It is possible that particular serine proteases may have inhibiting effects on the replication of HIV-1 in myelo-monocytic cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 particular particular ADJ JJ Degree=Pos _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ _ 7 proteases protease NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 myelo myelo X AFX _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1256 # text = The data also demonstrate that special precautions must be taken when making extracts from myelo-monocytic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 special special ADJ JJ Degree=Pos _ _ _ _ 7 precautions precaution NOUN NNS Number=Plur _ _ _ _ 8 must must AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 taken take VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 making make VERB VBG VerbForm=Ger _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 myelo myelo X AFX _ _ _ _ SpaceAfter=No 16 -monocytic -monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1257 # text = Document 00300129 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300129 00300129 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1258 # text = Nuclear factor-kappaB activation in human monocytes stimulated with lipopolysaccharide is inhibited by fibroblast conditioned medium and exogenous PGE2. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 fibroblast fibroblast ADV RB _ _ _ _ _ 15 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 medium medium ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 19 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1259 # text = The nuclear factor kappaB (NF-kappaB) is thought to be crucially involved in the gene activation of several cytokines, including tumor necrosis factor alpha (TNF). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 crucially crucially ADV RB _ _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1260 # text = Previously, we showed that fibroblast conditioned medium (FCM) is able to inhibit both TNF mRNA accumulation and protein release in peripheral blood-derived human monocytes (PBM) stimulated with lipopolysaccharide (LPS). 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 fibroblast fibroblast ADV RB _ _ _ _ _ 7 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 medium medium NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FCM FCM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 able able ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 release release NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PBM PBM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1261 # text = In this study we have investigated the effect of FCM on the LPS-induced DNA-binding activity of NF-kappaB, by means of electrophoretic shift assay (EMSA). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FCM FCM PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 means means NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 29 shift shift NOUN NN Number=Sing _ _ _ _ 30 assay assay NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1262 # text = We provide evidence that FCM strongly inhibits the LPS-induced NF-kappaB activation in PBM. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 FCM FCM PROPN NNP Number=Sing _ _ _ _ 6 strongly strongly ADV RB _ _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 PBM PBM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1263 # text = Furthermore, we show that exogenous PGE2 mimics the NF-kappaB inhibitory effect of FCM. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 7 PGE2 PGE2 NOUN NN Number=Sing _ _ _ _ 8 mimics mimics NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FCM FCM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1264 # text = On the other hand, FCM produced in the presence of indomethacin does not inhibit NF-kappaB activation by LPS. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 FCM FCm PROPN NNP Number=Sing _ _ _ _ 7 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 indomethacin indomethacin NOUN NN Number=Sing _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1265 # text = Our results lend further support to the hypothesis that inflammatory and immune responses of monocytes/macrophages may be modulated at the molecular level by signals originating from tissue structural cells such as fibroblasts. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 lend lend VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADJ JJ Degree=Pos _ _ _ _ 5 support support NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 responses response NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ _ 27 originating originate VERB VBG VerbForm=Ger _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 tissue tissue NOUN NN Number=Sing _ _ _ _ 30 structural structural ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1266 # text = Document 00300130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300130 00300130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1267 # text = Interferon-gamma potentiates the antiviral activity and the expression of interferon-stimulated genes induced by interferon-alpha in U937 cells. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma PROPN NNP Number=Sing _ _ _ _ 4 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1268 # text = Binding of type I interferon (IFN-alpha/beta) to specific receptors results in the rapid transcriptional activation, independent of protein synthesis, of IFN-alpha-stimulated genes (ISGs) in human fibroblasts and HeLa and Daudi cell lines. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 interferon interferon X FW Foreign=Yes _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha/beta alpha/beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 independent independent ADJ JJ Degree=Pos _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ISGs ISGs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1269 # text = The binding of ISGF3 (IFN-stimulated gene factor 3) to the conserved IFN-stimulated response element (ISRE) results in transcriptional activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 3 3 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 ISRE ISRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 results result NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1270 # text = This factor is composed of a DNA-binding protein (ISGF3 gamma), which normally is present in the cytoplasm, and other IFN-alpha-activated proteins which preexist as latent cytoplasmic precursors (ISGF3 alpha). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 preexist preexist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 latent latent ADJ JJ Degree=Pos _ _ _ _ 36 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 37 precursors precursor NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1271 # text = We have found that ISG expression in the monocytic U937 cell line differs from most cell lines previously examined. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ISG ISG VERB VBG VerbForm=Ger _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 U937 U937 NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 differs differ NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 most most ADJ JJS Degree=Sup _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 previously previously ADV RB _ _ _ _ _ 19 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1272 # text = U937 cells express both type I and type II IFN receptors, but only IFN-alpha is capable of inducing antiviral protection in these cells. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 23 protection protection NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1273 # text = Pretreatment with IFN-gamma potentiates the IFN-alpha-induced protection, but IFN-gamma alone does not have any antiviral activity. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma PROPN NNP Number=Sing _ _ _ _ 6 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 protection protection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma PROPN NNP Number=Sing _ _ _ _ 19 alone alone ADV RB _ _ _ _ _ 20 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 have have VERB VB VerbForm=Inf _ _ _ _ 23 any any DET DT _ _ _ _ _ 24 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1274 # text = ISG15 mRNA accumulation in U937 cells is not detectable before 6 h of IFN-alpha treatment, peaks at 24 h, and requires protein synthesis. 1 ISG15 ISG15 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 10 before before ADP IN _ _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 peaks peak NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 24 24 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1275 # text = Although IFN-gamma alone does not induce ISG expression, IFN-gamma pretreatment markedly increases and hastens ISG expression and transcriptional induction. 1 Although although SCONJ IN _ _ _ _ _ 2 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 alone alone NOUN NN Number=Sing _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 ISG ISG PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ _ 15 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 hastens hasten VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 ISG ISG ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1276 # text = Nuclear extracts assayed for the presence of ISRE binding factors by electrophoretic mobility shift assays show that ISGF3 is induced by IFN-alpha within 6 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ISRE Isre PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 13 mobility mobility NOUN NN Number=Sing _ _ _ _ 14 shift shift NOUN NN Number=Sing _ _ _ _ 15 assays assay NOUN NNS Number=Plur _ _ _ _ 16 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 alpha alpha ADV RB _ _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 1277 # text = h from undetectable basal levels in untreated U937 cells. 1 h h INTJ UH _ _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 4 basal basal ADJ JJ Degree=Pos _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1278 # text = Activation of ISGF3 alpha, the latent component of ISGF3, occurs rapidly. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 component component NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 occurs occurs ADV RB _ _ _ _ _ 13 rapidly rapidly ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1279 # text = However, the increase in ISGF3 activity ultimately correlates with the accumulation of ISGF3 gamma induced by IFN-alpha or IFN-gamma. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 ultimately ultimately ADV RB _ _ _ _ _ 9 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1280 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1281 # text = Document 00300131 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300131 00300131 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1282 # text = Interferon-alpha activates multiple 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1283 # text = STAT proteins and upregulates proliferation-associated IL-2Ralpha, c-myc, and pim-1 genes in human T cells. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 upregulates upregulate NOUN NNS Number=Plur _ _ _ _ 5 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 myc myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1284 # text = Interferon-alpha (IFN-alpha) is a pleiotropic cytokine that has antiviral, antiproliferative, and immunoregulatory functions. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 antiviral antiviral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 21 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1285 # text = There is increasing evidence that IFN-alpha has an important role in T-cell biology. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1286 # text = We have analyzed the expression of IL-2Ralpha, c-myc, and pim-1 genes in anti-CD3-activated human T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -activated -activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1287 # text = The induction of these genes is associated with interleukin-2 (IL-2)-induced T-cell proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1288 # text = Treatment of T lymphocytes with IFN-alpha, IL-2, IL-12, and IL-15 upregulated IL-2Ralpha, c-myc, and pim-1 gene expression. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -12 -12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 15 15 NUM CD NumType=Card _ _ _ _ 21 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1289 # text = IFN-alpha also sensitized T cells to IL-2-induced proliferation, further suggesting that IFN-alpha may be involved in the regulation of T-cell mitogenesis. 1 IFN- IFN- SYM NFP _ _ _ _ SpaceAfter=No 2 alpha alpha NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 sensitized sensitize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 T t NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 further further ADV RB _ _ _ _ _ 16 suggesting suggesting VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1290 # text = When we analyzed the nature of STAT proteins capable of binding to IL-2Ralpha, pim-1, and IRF-1 GAS elements after cytokine stimulation, we observed IFN-alpha-induced binding of STAT1, STAT3, and STAT4, but not STAT5 to all of these elements. 1 When when ADV WRB PronType=Int _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nature nature NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 Ralpha Ralpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 GAS gas NOUN NN Number=Sing _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 observed observe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 binding binding NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 but but CCONJ CC _ _ _ _ _ 48 not not ADV RB _ _ _ _ _ 49 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 all all DET DT _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1291 # text = Yet, IFN-alpha was able to activate binding of STAT5 to the high-affinity IFP53 GAS site. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 affinity affinity NOUN NN Number=Sing _ _ _ _ 18 IFP53 IFP53 NUM CD NumType=Card _ _ _ _ 19 GAS gas PROPN NNP Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1292 # text = IFN-alpha enhanced tyrosine phosphorylation of STAT1, STAT3, STAT4, STAT5a, and STAT5b. 1 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha X FW Foreign=Yes _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 STAT5a STAT5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1293 # text = IL-12 induced STAT4 and IL-2 and IL-15 induced STAT5 binding to the GAS elements. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 STAT4 Stat4 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 15 15 NUM CD NumType=Card _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 GAS gas PROPN NNP Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1294 # text = Taken together, our results suggest that IFN-alpha, IL-2, IL-12, and IL-15 have overlapping activities on human T cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -12 -12 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 15 15 NUM CD NumType=Card _ _ _ _ 23 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1295 # text = These findings thus emphasize the importance of IFN-alpha as a T-cell regulatory cytokine. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 importance importance NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1296 # text = Document 00300132 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300132 00300132 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1297 # text = An alternatively spliced isoform of the Spi-B transcription factor. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 alternatively alternatively ADV RB _ _ _ _ _ 3 spliced spliced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 isoform isoform NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1298 # text = Spi-B is an Ets transcription factor related to the oncoprotein Spi-1/PU.1 and highly expressed in B lymphoid cells. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -B PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 12 Spi-1/ spi-1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1299 # text = The Ets proteins share a conserved Ets domain that mediates specific DNA binding. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ets ets PROPN NNPS Number=Plur _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Ets ets NOUN NNS Number=Plur _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1300 # text = Spi-B binds DNA sequences containing a core 5'-GGAA-3' and activates transcription through this motif. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -B PROPN NNP Number=Sing _ _ _ _ 3 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 GGAA GGAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 activates activate NOUN NNS Number=Plur _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1301 # text = Up to date, the biological function of Spi-B remains unknown. 1 Up up ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 date date NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 biological biological ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B b PROPN NNP Number=Sing _ _ _ _ 12 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1302 # text = Here, we describe the characterization of an alternatively spliced variant of Spi-B, named deltaSpi-B, which has lost the Ets domain. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 alternatively alternatively ADV RB _ _ _ _ _ 10 spliced spliced ADJ JJ Degree=Pos _ _ _ _ 11 variant variant NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 deltaSpi deltaSpi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -B -B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 lost lose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Ets Et PROPN NNPS Number=Plur _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1303 # text = In B lymphoid cells, deltaspi-B and spi-B mRNAs were present simultaneously in a ratio of around 10%. 1 In in ADP IN _ _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 deltaspi deltaspi ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -B -b NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 spi spi X AFX _ _ _ _ SpaceAfter=No 10 -B -b ADJ JJ Degree=Pos _ _ _ _ 11 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 simultaneously simultaneously ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 ratio ratio NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 around around ADV RB _ _ _ _ _ 20 10% 10% SYM NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1304 # text = DeltaSpi-B product was not able to bind DNA and was recovered in cytoplasmic cellular extracts. 1 DeltaSpi DeltaSpi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -b PROPN NNP Number=Sing _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 able able ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 recovered recover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1305 # text = We raise the hypothesis that delta Spi-B might affect Spi-B function by recruiting factors involved in Spi-B activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 delta delta PROPN NNP Number=Sing _ _ _ _ 7 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B b PROPN NNP Number=Sing _ _ _ _ 10 might might AUX MD VerbForm=Fin _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b PROPN NNP Number=Sing _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 recruiting recruite VERB VBG VerbForm=Ger _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 involved involve ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1306 # text = Document 00300133 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300133 00300133 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1307 # text = ZAP-70 tyrosine kinase, CD45, and T cell receptor involvement in UV- and H2O2-induced T cell signal transduction. 1 ZAP Zap SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 70 70 NUM CD NumType=Card _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 involvement involvement NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 UV UV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 H2O2 h2o2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1308 # text = Several mammalian responses to UV irradiation, including the activation of NF-kappa B, are believed to involve tyrosine phosphorylation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 responses response NOUN NNS Number=Plur _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 UV UV PROPN NNP Number=Sing _ _ _ _ 6 irradiation irradiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 involve involve VERB VB VerbForm=Inf _ _ _ _ 21 tyrosine tyrosine PRON PRP _ _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1309 # text = UV irradiation and H2O2 treatment of T lymphocytes induce protein tyrosine phosphorylation and Ca2+ signals similar to those observed following biological stimulation. 1 UV UV NOUN NN Number=Sing _ _ _ _ 2 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 following follow VERB VBG VerbForm=Ger _ _ _ _ 22 biological biological ADJ JJ Degree=Pos _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1310 # text = We have examined the role of cell surface molecules in these responses. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 surface surface NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1311 # text = Normal T lymphocytes whose surface expression of CD3 was depleted showed impaired UV-induced tyrosine phosphorylation and Ca2+ signals. 1 Normal normal PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 5 surface surface VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 showed show ADJ JJ Degree=Pos _ _ _ _ 12 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 UV UV NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1312 # text = Similarly, Jurkat T cell lines deficient in CD3 or CD45 expression also gave impaired UV responses. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 CD3 CD3 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 CD45 CD45 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 16 UV uv NOUN NN Number=Sing _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1313 # text = However, all these cell types still gave strong Ca2+ and tyrosine phosphorylation responses to H2O2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET PDT _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 types type NOUN NNS Number=Plur _ _ _ _ 7 still still ADV RB _ _ _ _ _ 8 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 strong strong ADJ JJ Degree=Pos _ _ _ _ 10 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1314 # text = The T cell tyrosine kinase ZAP-70 was found to be highly responsive to UV and H2O2 treatment. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ZAP Zap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 70 70 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 UV UV PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1315 # text = ZAP-70 responsiveness to UV required expression of both CD3 and CD45, whereas only CD3 was required for the response to H2O2. 1 ZAP Zap SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 70 70 NUM CD NumType=Card _ _ _ _ 4 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 UV UV PROPN NNP Number=Sing _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD45 Cd45 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1316 # text = UV-induced activation of NF-kappa B was blocked by CD3 depletion, indicating the importance of such cell surface molecules in biological responses to UV. 1 UV haUve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 CD3 CD3 NUM CD NumType=Card _ _ _ _ 14 depletion depletion NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 importance importance NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 such such ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 biological biological ADJ JJ Degree=Pos _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 UV UV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1317 # text = In nonlymphoid cells, the epidermal growth factor receptor displayed increased tyrosine phosphorylation within seconds of UV irradiation. 1 In in ADP IN _ _ _ _ _ 2 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 seconds seconds NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 UV UV PROPN NNP Number=Sing _ _ _ _ 18 irradiation irradiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1318 # text = These results suggest that UV-induced signal transduction is mediated via cell surface receptors that normally respond to biological stimulation, whereas 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 UV uv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transduction transduction NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 biological biological ADJ JJ Degree=Pos _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas wherea SCONJ IN _ _ _ _ _ # sent_id = 1319 # text = H2O2 is able to partially bypass this requirement. 1 H2O2 h2o2 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 able able ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 bypass bypass VERB VB VerbForm=Inf _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 requirement requirement NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1320 # text = Document 00300134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300134 00300134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1321 # text = Bcl-2 protein inhibits bufalin-induced apoptosis through inhibition of mitogen-activated protein kinase activation in human leukemia U937 cells. 1 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 bufalin- bufalin- PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemion NOUN NN Number=Sing _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1322 # text = In a previous study, we demonstrated that bufalin, which is an active principle of Chinese medicine, chan'su, caused apoptosis in human leukemia U937 cells by anomalous activation of mitogen-activated protein kinase (MAPK) via the signaling pathway of Ras, Raf-1, and MAPK kinase-1. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 previous previous ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 principle principle NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 18 medicine medicine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 chan chan NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 'su 'su NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 leukemia leukemion NOUN NN Number=Sing _ _ _ _ 28 U937 U937 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 anomalous anomalous ADJ JJ Degree=Pos _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT : _ _ _ _ SpaceAfter=No 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 via via ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 signaling signaling NOUN NN Number=Sing _ _ _ _ 45 pathway pathway NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 55 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 1323 # text = Here, we report the effect of overexpression of bcl-2 in U937 cells on the signaling pathway of apoptosis that is induced by bufalin. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 signaling signal NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1324 # text = The results indicated that the apoptosis induced by bufalin in U937 cells was significantly inhibited by overexpression of the Bcl-2 protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 bufalin bufalin NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 significantly significantly ADV RB _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1325 # text = No significant difference was detected in the activation of MAPK kinase-1 that is induced by bufalin in wild-type or Bcl-2-overexpressed 1 No no DET DT _ _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 bufalin bufalin NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 1326 # text = U937 cells; however, the activation of MAPK by bufalin was significantly attenuated in the cells overexpressing Bcl-2. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ; ; PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 bufalin bufalin PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 19 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1327 # text = Bufalin treatment activated activator protein-1 transcriptional activity; however, this activation was decreased to 40% in bcl-2-overexpressed U937 cells. 1 Bufalin Bufalin PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activator activator NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U937 U937 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1328 # text = These results indicate that Bcl-2 acts downstream of MAPK kinase-1 but upstream of MAPK and suggest that, in the signaling pathway of the apoptotic process induced by bufalin, the transcriptional activity of activator protein-1 may be down-regulated through the inhibition of MAPK activity by Bcl-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 acts act NOUN NNS Number=Plur _ _ _ _ 9 downstream downstream NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 30 process process NOUN NN Number=Sing _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 activator activator NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 may may AUX MD VerbForm=Fin _ _ _ _ 44 be be AUX VB VerbForm=Inf _ _ _ _ 45 down down ADV RB _ _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 through through ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1329 # text = Document 00300135 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300135 00300135 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1330 # text = STAT1 activation during monocyte to macrophage maturation: role of adhesion molecules. 1 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 during during ADP IN _ _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 7 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1331 # text = Human monocytes isolated from peripheral blood of healthy donors show a time-dependent differentiation into macrophages upon in vitro cultivation, closely mimicking their in vivo migration and maturation into extravascular tissues. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 9 donors donor NOUN NNS Number=Plur _ _ _ _ 10 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 upon upon ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ _ 21 cultivation cultivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 closely closely ADV RB _ _ _ _ _ 24 mimicking mimick VERB VBG VerbForm=Ger _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ _ 28 migration migration NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 maturation maturation NOUN NN Number=Sing _ _ _ _ 31 into into ADP IN _ _ _ _ _ 32 extravascular extravascular ADJ JJ Degree=Pos _ _ _ _ 33 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1332 # text = The mediator(s) of this maturation process has not been yet defined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mediator mediator NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 maturation maturation NOUN NN Number=Sing _ _ _ _ 9 process process NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 yet yet ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1333 # text = We investigated the involvement of signal transducers and activators of transcription (STAT) factors in this phenomenon and reported the specific, time-dependent, activation of STAT1 protein starting at day 0/1 of cultivation and maximally expressed at day 5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 involvement involvement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transducers transducer NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 starting start VERB VBG VerbForm=Ger _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 day day NOUN NN Number=Sing _ _ _ _ 35 0/1 0/1 NUM CD NumType=Card _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cultivation cultivation NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 maximally maximally ADV RB _ _ _ _ _ 40 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 day day NOUN NN Number=Sing _ _ _ _ 43 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1334 # text = STAT1 activity was evident on the STAT binding sequences (SBE) present in the promoters of genes which are up-regulated during monocyte to macrophage maturation such as FcgammaRI and ICAM-1, and in the promoter of the transcription factor IFN regulatory factor-1. 1 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 evident evident ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 SBE SBE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 promoters promoter NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 up up ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 macrophage macrophage VERB VB VerbForm=Inf _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ _ 29 such such ADJ JJ Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 FcgammaRI Fcgammari PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 IFN Ifn ADP IN _ _ _ _ _ 46 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1335 # text = Moreover, the effect of cell adhesion to fibronectin or laminin was studied to investigate mechanisms involved in STAT1 activation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 laminin laminin NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 16 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1336 # text = Compared with monocytes adherent on plastic surfaces, freshly isolated cells allowed to adhere either to fibronectin- or laminin-coated flasks exhibited an increased STAT1 binding activity both in control and in IFN-gamma-treated cells. 1 Compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 7 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 freshly freshly ADV RB _ _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 adhere adhere VERB VB VerbForm=Inf _ _ _ _ 15 either either ADV RB _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 laminin laminin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 coated coate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 flasks flask NOUN NNS Number=Plur _ _ _ _ 24 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 STAT1 stat1 NOUN NN Number=Sing _ _ _ _ 28 binding binde VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1337 # text = The molecular events leading to enhanced STAT1 activation and cytokine responsiveness concerned both Y701 and S727 STAT1 phosphorylation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 leading lead VERB VBG VerbForm=Ger _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 7 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 12 concerned concern ADJ JJ Degree=Pos _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 Y701 Y701 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 S727 S727 NUM CD NumType=Card _ _ _ _ 17 STAT1 STAT1 NOUN NN Number=Sing _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1338 # text = Exogenous addition of transforming growth factor-beta, which exerts an inhibitory effect on some monocytic differentiation markers, inhibited macrophage maturation, integrin expression and STAT1 binding activity. 1 Exogenous Exogenous ADJ JJ Degree=Pos _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 some some DET DT _ _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 29 binding binde VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1339 # text = Taken together these results indicate that STAT1 plays a pivotal role in the differentiation/maturation process of monocytes as an early transcription factor initially activated by adherence and then able to modulate the expression of functional genes, such as ICAM-1 and FcgammaRI. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 maturation maturation NOUN NN Number=Sing _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 early early ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 initially initially ADV RB _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 adherence adherence NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 then then ADV RB PronType=Dem _ _ _ _ 31 able able ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 such such ADJ JJ Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - SYM SYM _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1340 # text = Document 00300136 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300136 00300136 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1341 # text = Nuclear localization and formation of beta-catenin-lymphoid enhancer factor 1 complexes are not sufficient for activation of gene expression. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 localization localization NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 formation formation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 beta-catenin beta-catenin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 complexes complexe NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1342 # text = In response to activation of the Wnt signaling pathway, beta-catenin accumulates in the nucleus, where it cooperates with LEF/TCF (for lymphoid enhancer factor and T-cell factor) transcription factors to activate gene expression. 1 In in ADP IN _ _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Wnt Wnt PROPN NNP Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 catenin catenin NOUN NN Number=Sing _ _ _ _ 14 accumulates accumulate NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 where where ADV WRB PronType=Rel _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 TCF TCF PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 for for ADP IN _ _ _ _ _ 28 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1343 # text = The mechanisms by which beta-catenin undergoes this shift in location and participates in activation of gene transcription are unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 catenin catenin NOUN NN Number=Sing _ _ _ _ 8 undergoes undergo AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 location location NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 participates participate NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1344 # text = We demonstrate here that beta-catenin can be imported into the nucleus independently of LEF/TCF binding, and it may also be exported from nuclei. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 catenin catenin NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 imported import VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 14 independently independently ADV RB _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 TCF TCF PROPN NNP Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 exported export VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1345 # text = We have introduced a small deletion within beta-catenin (Delta19) that disrupts binding to LEF-1, E-cadherin, and APC but not axin. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 catenin catenin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cadherin cadherin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 APC APC PROPN NNP Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 axin axin ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1346 # text = This Delta19 beta-catenin mutant localizes to the nucleus because it may not be efficiently sequestered in the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 catenin catenin NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 localizes localize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 11 because because SCONJ IN _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 efficiently efficiently ADV RB _ _ _ _ _ 17 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1347 # text = The nuclear localization of Delta19 definitively demonstrates that the mechanisms by which beta-catenin localizes in the nucleus are completely independent of LEF/TCF factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ _ 6 definitively definitively ADV RB _ _ _ _ _ 7 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 catenin catenin NOUN NN Number=Sing _ _ _ _ 16 localizes localize NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 completely completely ADV RB _ _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 TCF TCF PROPN NNP Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1348 # text = beta-Catenin and LEF-1 complexes can activate reporter gene expression in a transformed T-lymphocyte cell line (Jurkat) but not in normal T lymphocytes, even though both factors are nuclear. 1 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Catenin Catenin PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 even even ADV RB _ _ _ _ _ 32 though though SCONJ IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1349 # text = Thus, localization of both factors to the nucleus is not sufficient for activation of gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1350 # text = Excess beta-catenin can squelch reporter gene activation by LEF-1-beta-catenin complexes but not activation by the transcription factor VP16. 1 Excess Excess NOUN NN Number=Sing _ _ _ _ 2 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 catenin catenin NOUN NN Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 squelch squelch VERB VB VerbForm=Inf _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1-beta 1-beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 catenin catenin NOUN NN Number=Sing _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 VP vp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1351 # text = Taken together, these data suggest that a third component is necessary for gene activation and that this third component may vary with cell type. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 20 component component NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 vary vary VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1352 # text = Document 00300137 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300137 00300137 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1353 # text = One gene, two transcripts: isolation of an alternative transcript encoding for the autoantigen La/SS-B from a cDNA library of a patient with primary Sjogrens' syndrome. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 isolation isolation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 11 transcript transcript NOUN NN Number=Sing _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 autoantigen autoantigen ADJ JJ Degree=Pos _ _ _ _ 16 La/SS La/ss NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 B b NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 22 library library NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 patient patient NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 primary primary ADJ JJ Degree=Pos _ _ _ _ 28 Sjogrens Sjogrens PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 ' ' PART POS _ _ _ _ _ 30 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1354 # text = A cDNA library was prepared from peripheral blood lymphocytes of an autoimmune patient with primary Sjogrens' syndrome. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 library library NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 13 patient patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 Sjogrens sjogrens PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1355 # text = The cDNA library was screened with the patients own autoimmune serum being monospecific for the nuclear autoantigen La/SS-B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 library library NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 screened screen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 own own VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 monospecific monospecific ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 autoantigen autoantigen NOUN NN Number=Sing _ _ _ _ 18 La/SS La/ss PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1356 # text = Thereby an alternative type of La mRNA was identified that differed from the known La mRNA due to an exchange of the exon 1. 1 Thereby thereby ADV RB _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 La La PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 differed differ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 La La PROPN NNP Number=Sing _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 exchange exchange NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 exon exon NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1357 # text = Sequencing of the genomic region between the exons 1 and 2 showed that the alternative 5'-end is a part of the intron. 1 Sequencing Sequencing NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 exons exon NOUN NNS Number=Plur _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 end end NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1358 # text = In addition, the presence of an alternative promoter site, which exists within the intron downstream of the exon 1, became evident. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ _ 17 downstream downstream NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 exon exon NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 evident evident ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1359 # text = In consequence, the alternative La mRNA is the result of a promoter switching combined with an alternative splicing mechanism. 1 In in ADP IN _ _ _ _ _ 2 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 6 La La PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 result result NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 switching switching VERB VBG VerbForm=Ger _ _ _ _ 15 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 19 splicing splicing NOUN NN Number=Sing _ _ _ _ 20 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1360 # text = In the intron, further transcription factor binding sites, including a NF-kappa B element, were identified leading to the suggestion that the expression of the gene encoding for the nuclear autoantigen La/SS-B alters in dependence on disease conditions. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 further further ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 leading lead VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 suggestion suggestion NOUN NN Number=Sing _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 autoantigen autoantigen NOUN NN Number=Sing _ _ _ _ 36 La/SS La/ss NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 B b NOUN NN Number=Sing _ _ _ _ 39 alters alter NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 dependence dependence NOUN NN Number=Sing _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 disease disease NOUN NN Number=Sing _ _ _ _ 44 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1361 # text = Document 00300138 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300138 00300138 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1362 # text = Regulation of the tissue factor gene in human monocytic cells. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1363 # text = Role of AP-1, NF-kappa B/Rel, and Sp1 proteins in uninduced and lipopolysaccharide-induced expression. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1364 # text = Tissue factor (TF) expression by peripheral blood monocytes during sepsis initiates intravascular thrombosis. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 sepsis sepsis ADJ JJ Degree=Pos _ _ _ _ 13 initiates initiate NOUN NNS Number=Plur _ _ _ _ 14 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 15 thrombosis thrombosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1365 # text = Bacterial lipopolysaccharide (LPS) rapidly induces TF gene transcription in monocytes. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 TF Tf ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1366 # text = The human TF promoter contains binding sites for the transcription factors AP-1, c-Rel/p65, Egr-1, and Sp1. NF-kappa B/Rel proteins have been shown to physically interact with both AP-1 and Sp1 proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 Rel/p65 Rel/p65 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Rel Rel NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 physically physically ADV RB _ _ _ _ _ 37 interact interact ADV RB _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 45 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1367 # text = In this study, we investigated the role of these transcription factors in uninduced and LPS-induced TF gene expression in human monocytic THP-1 cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 TF Tf NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1368 # text = Deletional analysis indicated that five Sp1 sites mediated basal expression in uninduced cells. 1 Deletional Deletional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 five five NUM CD NumType=Card _ _ _ _ 6 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 basal basal ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1369 # text = The two AP-1 sites bound c-Fos/c-Jun heterodimers in both unstimulated and LPS-stimulated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 bound bound ADP IN _ _ _ _ _ 8 c-Fos/c c-Fos/c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 -Jun -Jun ADJ JJ Degree=Pos _ _ _ _ 10 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1370 # text = Maximal LPS induction of the TF promoter required the two AP-1 sites and the kappa B site within the LPS response element. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 LPS Lps NOUN NN Number=Sing _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TF TF PROPN NNP Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1371 # text = Disruption of the conserved spacing between the proximal AP-1 site and the kappa B site abolished LPS induction. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 spacing spacing NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 LPS Lp NOUN NNS Number=Plur _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1372 # text = Replacement of the two AP-1 sites with intrinsically bent DNA partially restored LPS induction, suggesting an additional structural role for the AP-1 sites. 1 Replacement replacement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 intrinsically intrinsically ADV RB _ _ _ _ _ 11 bent bent ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 partially partially ADV RB _ _ _ _ _ 14 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 LPS Lps PROPN NNP Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 additional additional ADJ JJ Degree=Pos _ _ _ _ 21 structural structural ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1373 # text = Synergistic transactivation of the LPS response element in Drosophila Schneider cells by coexpression of c-Fos, c-Jun, c-Rel, and p65 or c-Jun and p65 required the transactivation domains of c-Jun and p65. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 10 Schneider Schneider PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p65 p65 NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 Jun Jun PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 p65 p65 NUM CD NumType=Card _ _ _ _ 33 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 36 domains domain NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 Jun Jun PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1374 # text = These data indicated that c-Fos/c-Jun, c-Rel/p65, and Sp1 regulate TF gene expression in human monocytic cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -Jun -Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 c-Rel/p65 c-Rel/p65 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 12 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 13 TF TF PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1375 # text = Document 00300139 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300139 00300139 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1376 # text = Nuclear factor-IL6 activates the human IL-4 promoter in T cells. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1377 # text = Positive regulatory element I (PRE-I) is a strong enhancer element essential for expression of the human IL-4 gene. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1378 # text = To identify transcription factors binding to PRE-I, we screened a cDNA expression library from Jurkat T cells and isolated a cDNA encoding nuclear factor (NF)-IL6 (also known as C/EBP beta). 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 screened screen VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cDNA cDNA NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 library library NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 25 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 also also ADV RB _ _ _ _ _ 35 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 EBP EBP PROPN NNP Number=Sing _ _ _ _ 40 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1379 # text = NF-IL6 mRNA was found in human Jurkat T cells and in the mouse Th2 clone D10, but not in Th1 clone 29. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mouse mouse NOUN NN Number=Sing _ _ _ _ 16 Th2 Th2 NUM CD NumType=Card _ _ _ _ 17 clone clone NOUN NN Number=Sing _ _ _ _ 18 D10 D10 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Th1 Th1 NUM CD NumType=Card _ _ _ _ 24 clone clone NOUN NN Number=Sing _ _ _ _ 25 29 29 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1380 # text = rNF-IL6 expressed in bacteria was shown to specifically bind to PRE-I. 1 rNF rNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 bind bind VERB VB VerbForm=Inf _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1381 # text = PRE-I forms multiple DNA-protein complexes with nuclear extracts from Jurkat cells. 1 PRE pre ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 forms form NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1382 # text = Some of these complexes were demonstrated to contain NF-IL6 by using anti-C/EBP beta Abs. 1 Some some DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 complexes complexe NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 contain contain VERB VB VerbForm=Inf _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 anti-C anti-C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 EBP EBP PROPN NNP Number=Sing _ _ _ _ 17 beta beta PROPN NNP Number=Sing _ _ _ _ 18 Abs Abs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1383 # text = Overexpression of NF-IL6 enhanced expression of the chloramphenicol acetyl transferase reporter gene linked to the PRE-I-thymidine kinase or the human IL-4 promoter more than 10-fold in Jurkat cells. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 6 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 12 transferase transferase NOUN NN Number=Sing _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 than than ADP IN _ _ _ _ _ 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 fold fold NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1384 # text = Promoter deletion studies revealed two additional NF-IL6 binding sites located at positions -44 to -36 (C/EBP proximal) and -87 to -79 (C/EBP medial), respectively. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 additional additional ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 positions position NOUN NNS Number=Plur _ _ _ _ 15 -44 -44 NUM CD NumType=Card _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 -36 -36 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 EBP Ebp NOUN NN Number=Sing _ _ _ _ 21 proximal proximal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 87 87 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 -79 -79 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 C/ C/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 EBP EBP NOUN NN Number=Sing _ _ _ _ 31 medial medial NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1385 # text = Our results demonstrate that NF-IL6 is involved in transcriptional activation of the human IL-4 promoter in T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1386 # text = Document 00300140 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300140 00300140 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1387 # text = An 11-base-pair DNA sequence motif apparently unique to the human interleukin 4 gene confers responsiveness to T-cell activation signals. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 pair pair NOUN NN Number=Sing _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 apparently apparently ADV RB _ _ _ _ _ 11 unique unique ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 confers confer NOUN NNS Number=Plur _ _ _ _ 19 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1388 # text = We have identified a DNA segment that confers responsiveness to antigen stimulation signals on the human interleukin (IL) 4 gene in Jurkat cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 segment segment NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 confers confer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 signals signal NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 4 4 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1389 # text = The human IL-4 gene, of 10 kilobases, is composed of four exons and three introns. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ _ 10 kilobases kilobase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 four four NUM CD NumType=Card _ _ _ _ 16 exons exon NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 three three NUM CD NumType=Card _ _ _ _ 19 introns intron NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1390 # text = A cis-acting element (P sequence) resides in the 5' upstream region; no additional DNA segments with enhancer activity were identified in the human IL-4 gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting acting VERB VBG VerbForm=Ger _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 P p NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 resides reside NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 additional additional ADJ JJ Degree=Pos _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 segments segment NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 4 4 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1391 # text = For further mapping purposes, a fusion promoter was constructed with the granulocyte/macrophage colony-stimulating factor basic promoter containing 60 base pairs of sequence upstream from the cap site of the mouse granulocyte/macrophage colony-stimulating factor gene and various lengths of the 5' upstream sequence of the IL-4 gene. 1 For for ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 mapping mapping NOUN NN Number=Sing _ _ _ _ 4 purposes purpose NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 fusion fusion NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 16 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 basic basic ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 60 60 NUM CD NumType=Card _ _ _ _ 24 base base NOUN NN Number=Sing _ _ _ _ 25 pairs pair NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cap cap NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 mouse mouse NOUN NN Number=Sing _ _ _ _ 36 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 39 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 various various ADJ JJ Degree=Pos _ _ _ _ 46 lengths length NOUN NNS Number=Plur _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ' 's PUNCT `` _ _ _ _ _ 51 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 52 sequence sequence NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 4 4 NUM CD NumType=Card _ _ _ _ 58 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 1392 # text = The P sequence was located between positions -79 and -69 relative to the transcription start site of the human IL-4 gene, and this location was confirmed by base-substitution mutations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 positions position NOUN NNS Number=Plur _ _ _ _ 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 79 79 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 69 69 NUM CD NumType=Card _ _ _ _ 13 relative relative ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 location location NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 substitution substitution NOUN NN Number=Sing _ _ _ _ 36 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1393 # text = The plasmids carrying multiple copies of the P sequence showed higher responsiveness to the stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 3 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 P P PROPN NNP Number=Sing _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 higher higher ADJ JJR Degree=Cmp _ _ _ _ 12 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1394 # text = The binding protein(s) that recognize the P sequence of the IL-4 gene were identified by DNA-mobility-shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 s s X AFX _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 P P NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1395 # text = The binding of NF(P) (a DNA binding protein that specifically recognizes the P sequence) to the P sequence was abolished when oligonucleotides carrying base substitutions were used, indicating that the NF(P) interaction is sequence-specific and that binding specificity of the protein paralleled the sequence requirements for IL-4 expression in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 P p NOUN NN Number=Sing _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 when when ADV WRB PronType=Int _ _ _ _ 27 oligonucleotides oligonucleotides SCONJ IN _ _ _ _ _ 28 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 29 base base NOUN NN Number=Sing _ _ _ _ 30 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 interaction interaction NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 specific specific ADJ JJ Degree=Pos _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 that that SCONJ IN _ _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 specificity specificity NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ _ 53 paralleled parallel VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 sequence sequence NOUN NN Number=Sing _ _ _ _ 56 requirements requirement NOUN NNS Number=Plur _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT , _ _ _ _ SpaceAfter=No 60 4 4 NUM CD NumType=Card _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 1396 # text = The P sequence does not share homology with the 5' upstream sequence of the IL-2 gene, even though surrounding sequences of the IL-4 gene share high homology with the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 share share VERB VB VerbForm=Inf _ _ _ _ 7 homology homology NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT `` _ _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 even even ADV RB _ _ _ _ _ 22 though though SCONJ IN _ _ _ _ _ 23 surrounding surround VERB VBG VerbForm=Ger _ _ _ _ 24 sequences sequence NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 share share NOUN NN Number=Sing _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 homology homology NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1397 # text = We conclude that a different set of proteins recognize IL-2 and IL-4 genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 set set NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1398 # text = Document 00300141 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300141 00300141 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1399 # text = PPARalpha activators inhibit cytokine-induced vascular cell adhesion molecule-1 expression in human endothelial cells. 1 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 2 activators activator NOUN NNS Number=Plur _ _ _ _ 3 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1400 # text = BACKGROUND: Adhesion molecule expression on the endothelial cell (EC) surface is critical for leukocyte recruitment to atherosclerotic lesions. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 4 molecule molecule NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 critical critical ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 18 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 21 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1401 # text = Better understanding of transcriptional regulation of adhesion molecules in ECs may provide important insight into plaque formation. 1 Better better ADJ JJ Degree=Pos _ _ _ _ 2 understanding understanding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ECs EC PROPN NNP Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 provide provide VERB VB VerbForm=Inf _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 insight insight NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 plaque plaque NOUN NN Number=Sing _ _ _ _ 17 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1402 # text = Peroxisome proliferator-activated receptor-alpha (PPARalpha), a member of the nuclear receptor family, regulates gene expression in response to certain fatty acids and fibric acid derivatives. 1 Peroxisome Peroxisome DET DT _ _ _ _ _ 2 proliferator proliferator NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 member member NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 certain certain ADJ JJ Degree=Pos _ _ _ _ 27 fatty fatty NOUN NN Number=Sing _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 fibric fibric ADJ JJ Degree=Pos _ _ _ _ 31 acid acid ADJ JJ Degree=Pos _ _ _ _ 32 derivatives derivative NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1403 # text = The present study investigated PPARalpha expression in human ECs and their regulation of vascular cell adhesion molecule-1 (VCAM-1). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 ECs EC NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1404 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 1405 # text = Immunohistochemistry revealed that human carotid artery ECs express PPARalpha. 1 Immunohistochemistry Immunohistochemistry PROPN NNP Number=Sing _ _ _ _ 2 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 carotid carotid NOUN NN Number=Sing _ _ _ _ 6 artery artery NOUN NN Number=Sing _ _ _ _ 7 ECs Ecs PROPN NNP Number=Sing _ _ _ _ 8 express express PROPN NNP Number=Sing _ _ _ _ 9 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1406 # text = Pretreatment of cultured human ECs with the PPARalpha activators fenofibrate or WY14643 inhibited TNF-alpha-induced VCAM-1 in a time- and concentration-dependent manner, an effect not seen with PPARgamma activators. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cultured culture ADJ JJ Degree=Pos _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 ECs EC NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 fenofibrate fenofibrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 WY WY VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 14643 14643 NUM CD NumType=Card _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 effect effect NOUN NN Number=Sing _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 39 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1407 # text = Both PPARalpha activators decreased cytokine-induced VCAM-1 mRNA expression without altering its mRNA half-life. 1 Both both DET DT _ _ _ _ _ 2 PPARalpha PPARalpha NOUN NN Number=Sing _ _ _ _ 3 activators activator NOUN NNS Number=Plur _ _ _ _ 4 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 without without SCONJ IN _ _ _ _ _ 14 altering alter VERB VBG VerbForm=Ger _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 16 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 life life NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1408 # text = Transient transfection of deletional VCAM-1 promoter constructs and electrophoretic mobility shift assays suggest that fenofibrate inhibits VCAM-1 transcription in part by inhibiting NF-kappaB. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 deletional deletional ADJ JJ Degree=Pos _ _ _ _ 5 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 assays assay NOUN NNS Number=Plur _ _ _ _ 15 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 fenofibrate fenofibrate ADJ JJ Degree=Pos _ _ _ _ 18 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 19 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 part part NOUN NN Number=Sing _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1409 # text = Finally, PPARalpha activators significantly reduced adhesion of U937 cells to cultured human ECs. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 cultured culture ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 ECs EC PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1410 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 1411 # text = Human ECs express PPARalpha, a potentially important regulator of atherogenesis through its transcriptional control of VCAM-1 gene expression. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 ECs EC NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potentially potentially ADV RB _ _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 regulator regulator NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1412 # text = Such findings also have implications regarding the clinical use of lipid-lowering agents, like fibric acids, which can activate PPARalpha. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implications implication NOUN NNS Number=Plur _ _ _ _ 6 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 use use NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 lipid lipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 lowering lowering VERB VBG VerbForm=Ger _ _ _ _ 14 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 like like ADP IN _ _ _ _ _ 17 fibric fibric ADJ JJ Degree=Pos _ _ _ _ 18 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 activate activate VERB VB VerbForm=Inf _ _ _ _ 23 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1413 # text = Document 00300142 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300142 00300142 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1414 # text = Inducible expression and phosphorylation of coactivator BOB.1/OBF.1 in T cells [see comments] BOB.1/OBF.1 is a transcriptional coactivator that is constitutively expressed in B cells and interacts with the Oct1 and Oct2 transcription factors. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 7 BOB.1/OBF BOB.1/OBF ADP IN _ _ _ _ SpaceAfter=No 8 .1 .1 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 16 BOB.1/OBF BOB.1/OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 .1 .1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 interacts interact NOUN NNS Number=Plur _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Oct1 oct1 PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1415 # text = Upon activation of Jurkat T cells and primary murine thymocytes with phorbol esters and ionomycin, BOB.1/OBF.1 expression and transactivation function were induced. 1 Upon upon ADP IN _ _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 murine murine NOUN NN Number=Sing _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 esters ester NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 .1 .1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1416 # text = BOB.1/OBF.1 was phosphorylated at Ser184 both in vivo and in vitro, and this modification was required for inducible activation. 1 BOB.1/OBF BOB.1/OBF ADP IN _ _ _ _ SpaceAfter=No 2 .1 .1 NUM CD NumType=Card _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 Ser184 Ser184 PROPN NNP Number=Sing _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vivo vivo NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 modification modification NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1417 # text = Mutation of Ser184 also diminished transactivation function in B cells, suggesting that the activating phosphorylation that is inducible in T cells is constitutively present in B cells. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Ser184 Ser184 PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activating activat VERB VBG VerbForm=Ger _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1418 # text = Thus, BOB.1/OBF.1 is a transcriptional coactivator that is critically regulated by posttranslational modifications to mediate cell type-specific gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 .1 .1 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 critically critically ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 15 modifications modification NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1419 # text = Document 00300143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300143 00300143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1420 # text = Oncogenic forms of NOTCH1 lacking either the primary binding site for RBP-Jkappa or nuclear localization sequences retain the ability to associate with RBP-Jkappa and activate transcription. 1 Oncogenic Oncogenic ADJ JJ Degree=Pos _ _ _ _ 2 forms form NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 5 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 localization localization NOUN NN Number=Sing _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 retain retain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 associate associate VERB VB VerbForm=Inf _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activate activate ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1421 # text = Truncated forms of the NOTCH1 transmembrane receptor engineered to resemble mutant forms of NOTCH1 found in certain cases of human T cell leukemia/lymphoma (T-ALL) efficiently induce T-ALL when expressed in the bone marrow of mice. 1 Truncated Truncated ADJ JJ Degree=Pos _ _ _ _ 2 forms form NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 6 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 engineered engineer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 resemble resemble VERB VB VerbForm=Inf _ _ _ _ 11 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 12 forms form NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 certain certain ADJ JJ Degree=Pos _ _ _ _ 18 cases cas NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 leukemia/ leukemiaith PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 ALL All PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 efficiently efficiently ADV RB _ _ _ _ _ 31 induce induce ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 ALL all ADV RB _ _ _ _ _ 35 when when ADV WRB PronType=Int _ _ _ _ 36 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 bone bone NOUN NN Number=Sing _ _ _ _ 40 marrow marrow NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1422 # text = Unlike full-sized NOTCH1, two such truncated forms of the protein either lacking a major portion of the extracellular domain (DeltaE) or consisting only of the intracellular domain (ICN) were found to activate transcription in cultured cells, presumably through RBP-Jkappa response elements within DNA. 1 Unlike unlike ADP IN _ _ _ _ _ 2 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 sized size VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NOTCH1 Notch1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 forms form NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 major major ADJ JJ Degree=Pos _ _ _ _ 18 portion portion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 consisting consist VERB VBG VerbForm=Ger _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ICN ICN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 presumably presumably ADV RB _ _ _ _ _ 46 through through ADP IN _ _ _ _ _ 47 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 50 response response NOUN NN Number=Sing _ _ _ _ 51 elements element NOUN NNS Number=Plur _ _ _ _ 52 within within ADP IN _ _ _ _ _ 53 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 1423 # text = Both truncated forms also bound to the transcription factor RBP-Jkappa in extracts prepared from human and murine T-ALL cell lines. 1 Both both DET DT _ _ _ _ _ 2 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 forms form NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 extracts extract NOUN NNS Number=Plur _ _ _ _ 15 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 human human NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 murine murine NOUN NN Number=Sing _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 ALL all DET DT _ _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1424 # text = Transcriptional activation required the presence of a weak RBP-Jkappa-binding site within the NOTCH1 ankyrin repeat region of the intracellular domain. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 weak weak ADJ JJ Degree=Pos _ _ _ _ 9 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NOTCH1 Notch1 NOUN NN Number=Sing _ _ _ _ 18 ankyrin ankyrin ADP IN _ _ _ _ _ 19 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1425 # text = Unexpectedly, a second, stronger RBP-Jkappa-binding site, which lies within the intracellular domain close to the transmembrane region and significantly augments association with RBP-Jkappa, was not needed for oncogenesis or for transcriptional activation. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 7 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 close close ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ _ 27 augments augment NOUN NNS Number=Plur _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 oncogenesis oncogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1426 # text = While ICN appeared primarily in the nucleus, DeltaE localized to cytoplasmic and nuclear membranes, suggesting that intranuclear localization is not essential for oncogenesis or transcriptional activation. 1 While while SCONJ IN _ _ _ _ _ 2 ICN ICN PROPN NNP Number=Sing _ _ _ _ 3 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 primarily primarily ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ _ 10 localized localize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 membranes membrane NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 intranuclear intranuclear ADJ JJ Degree=Pos _ _ _ _ 20 localization localization NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 essential essential ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 oncogenesis oncogenesis ADJ JJ Degree=Pos _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1427 # text = In support of this interpretation, mutation of putative nuclear localization sequences decreased nuclear localization and increased transcriptional activation by membrane-bound DeltaE. 1 In in ADP IN _ _ _ _ _ 2 support support NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interpretation interpretation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 mutation mutation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 sequences sequence NOUN NNS Number=Plur _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 localization localization NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 bound bound ADJ JJ Degree=Pos _ _ _ _ 24 DeltaE Delta NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1428 # text = Transcriptional activation by this mutant form of membrane-bound DeltaE was approximately equivalent to that produced by intranuclear ICN. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 bound bound ADJ JJ Degree=Pos _ _ _ _ 11 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 approximately approximately ADV RB _ _ _ _ _ 14 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 intranuclear intranuclear ADJ JJ Degree=Pos _ _ _ _ 20 ICN Icn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1429 # text = These data are most consistent with NOTCH1 oncogenesis and transcriptional activation being independent of association with RBP-Jkappa at promoter sites. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 8 oncogenesis oncogenesis PROPN NNPS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1430 # text = Document 00300144 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300144 00300144 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1431 # text = Impaired induction of c-fos/c-jun genes and of transcriptional regulatory proteins binding distinct c-fos/c-jun promoter elements in activated human T cells during aging. 1 Impaired Impaired VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 fos/c-jun fos/c-jun ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 c-fos/c-jun c-fos/c-jun NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1432 # text = The activation of transcriptional factor c-Fos/c-Jun AP-1 is essential for normal T cell responsiveness and is often impaired in T cells during aging. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -Jun -Jun PROPN NNP Number=Sing _ _ _ _ 8 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 essential essential ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 often often ADV RB _ _ _ _ _ 21 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1433 # text = In the present study, we investigated whether aberrancies in the regulation of c-fos/c-jun at the mRNA or protein level might underlie the age-associated impairments of AP-1 in human T cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 whether whether SCONJ IN _ _ _ _ _ 9 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 fos/c-jun fos/c-jun VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 might might AUX MD VerbForm=Fin _ _ _ _ 23 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 age- age- SYM NFP _ _ _ _ SpaceAfter=No 26 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 impairments impairment NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1434 # text = Whereas T cells from young subjects stimulated with cross-linked anti-CD3epsilon mAb OKT3 plus PMA or with the lectin PHA plus PMA demonstrated considerable increases in c-Fos protein expression, the expression of c-Fos but not c-Jun was markedly reduced in stimulated T cells from certain elderly subjects. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 young young ADJ JJ Degree=Pos _ _ _ _ 6 subjects subjects NOUN NNS Number=Plur _ _ _ _ 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 13 mAb mAb PROPN NNP Number=Sing _ _ _ _ 14 OKT3 OKT3 NUM CD NumType=Card _ _ _ _ 15 plus plus CCONJ CC _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lectin lectin PROPN NNP Number=Sing _ _ _ _ 21 PHA PHA PROPN NNP Number=Sing _ _ _ _ 22 plus plus CCONJ CC _ _ _ _ _ 23 PMA PMA PROPN NNP Number=Sing _ _ _ _ 24 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 26 increases increase NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 Fos Fos PROPN NNP Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 Fos Fos NOUN NNS Number=Plur _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 not not ADV RB _ _ _ _ _ 42 c- c- SYM NFP _ _ _ _ SpaceAfter=No 43 Jun Jun PROPN NNP Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 markedly markedly ADV RB _ _ _ _ _ 46 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 from from ADP IN _ _ _ _ _ 52 certain certain ADJ JJ Degree=Pos _ _ _ _ 53 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 54 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1435 # text = In addition, 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ # sent_id = 1436 # text = RNase protection assays revealed that anti-CD3/PMA-stimulated T cells from a substantial proportion of elderly subjects exhibited decreased levels of c-fos and/or c-jun mRNA compared to T cells from young subjects. 1 RNase RNase NOUN NN Number=Sing _ _ _ _ 2 protection protection NOUN NN Number=Sing _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 anti-CD3/PMA anti-CD3/PMa ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 14 proportion proportion NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 17 subjects subjects NOUN NNS Number=Plur _ _ _ _ 18 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fos fo NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 or or CCONJ CC _ _ _ _ _ 28 c- c- SYM SYM _ _ _ _ SpaceAfter=No 29 jun jun ADJ JJ Degree=Pos _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 young young ADJ JJ Degree=Pos _ _ _ _ 37 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1437 # text = Using electrophoretic mobility shift assays, the levels of nuclear regulatory proteins recognizing the AP-1 consensus TRE motif, the proximal c-jun TRE-like promoter element, and the c-fos serum response element (SRE) were determined in resting and stimulated T cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 TRE Tre NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 jun jun VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 TRE Tre ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fos fos NOUN NN Number=Sing _ _ _ _ 37 serum serum NOUN NN Number=Sing _ _ _ _ 38 response response NOUN NN Number=Sing _ _ _ _ 39 element element NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 resting rest VERB VBG VerbForm=Ger _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 1438 # text = Although the stimulation of T cells from young subjects resulted in coordinated increases of nuclear protein complexes binding the AP-1 TRE, c-jun TRE, and c-fos SRE DNA sequence motifs, age-related reductions in the activation of AP-1 were accompanied by decreased levels of c-jun TRE and c-fos SRE binding complexes. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 young young ADJ JJ Degree=Pos _ _ _ _ 9 subjects subjects NOUN NNS Number=Plur _ _ _ _ 10 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 increases increase NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 jun jun NOUN NN Number=Sing _ _ _ _ 27 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 fos fo NOUN NNS Number=Plur _ _ _ _ 32 SRE Sre ADJ JJ Degree=Pos _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 sequence sequence NOUN NN Number=Sing _ _ _ _ 35 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 related related ADJ JJ Degree=Pos _ _ _ _ 40 reductions reduction NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 c- c- SYM NFP _ _ _ _ SpaceAfter=No 55 jun jun NOUN NN Number=Sing _ _ _ _ 56 TRE tre NOUN NN Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 c- c- PUNCT , _ _ _ _ SpaceAfter=No 59 fos fo NOUN NNS Number=Plur _ _ _ _ 60 SRE Sre AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 61 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 62 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 1439 # text = Furthermore, the nuclear protein complexes binding the SRE motif induced in activated T cells of young and elderly subjects contained serum response factor and Elk-1 pointing toward age-related defects in the activation of transcriptional regulatory proteins distinct from c-jun/AP-1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 SRE SRE PROPN NNP Number=Sing _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 young young ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 20 subjects subject NOUN NNS Number=Plur _ _ _ _ 21 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Elk elk NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 pointing point VERB VBG VerbForm=Ger _ _ _ _ 30 toward toward ADP IN _ _ _ _ _ 31 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 related related ADJ JJ Degree=Pos _ _ _ _ 34 defects defect NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ _ 42 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 43 from from ADP IN _ _ _ _ _ 44 c- c- SYM NFP _ _ _ _ SpaceAfter=No 45 jun/AP jun/AP NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1440 # text = These results suggest that underlying aberrancies in the induction of c-fos/c-jun as well as their nuclear regulatory proteins may contribute to the age-related impairments of AP-1 activation in human T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 6 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 fos/c-jun fos/c-jun ADJ JJ Degree=Pos _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 related related ADJ JJ Degree=Pos _ _ _ _ 27 impairments impairment NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1441 # text = Document 00300145 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300145 00300145 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1442 # text = SLP-76 and Vav function in separate, but overlapping pathways to augment interleukin-2 promoter activity. 1 SLP Slp SYM NFP _ _ _ _ SpaceAfter=No 2 -76 -76 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Vav Vav PROPN NNP Number=Sing _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 separate separate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 augment augment NOUN NN Number=Sing _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1443 # text = SLP-76 and Vav, two hematopoietic cell specific molecules, are critical for T cell development and activation. 1 SLP Slp SYM NFP _ _ _ _ SpaceAfter=No 2 -76 -76 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1444 # text = Following 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 1445 # text = T cell antigen receptor stimulation, SLP-76 and Vav both undergo tyrosine phosphorylation and associate with each other via the SH2 domain of Vav and phosphorylated tyrosines of SLP-76. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 76 76 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Vav Vav PROPN NNP Number=Sing _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 associate associate NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 each each DET DT _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Vav Vav PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1446 # text = Furthermore, SLP-76 and Vav have a synergistic effect on interleukin (IL)-2 promoter activity in T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 76 76 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Vav Vav PROPN NNP Number=Sing _ _ _ _ 8 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1447 # text = In this report, we show that two tyrosines, Tyr-113 and Tyr-128, of SLP-76 are required for its binding to Vav, both in vitro and in intact cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Tyr Tyr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 113 113 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Tyr Tyr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -128 -128 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 76 76 NUM CD NumType=Card _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vitro vitro NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 intact intact ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1448 # text = Surprisingly, we find also that the interaction between SLP-76 and Vav is not required for their cooperation in augmenting IL-2 promoter activity, as the two molecules appear to function in different signaling pathways upstream of IL-2 gene expression. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 76 76 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Vav Vav PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 molecules molecule NOUN NNS Number=Plur _ _ _ _ 33 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 function function VERB VB VerbForm=Inf _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 different different ADJ JJ Degree=Pos _ _ _ _ 38 signaling signaling NOUN NN Number=Sing _ _ _ _ 39 pathways pathway NOUN NNS Number=Plur _ _ _ _ 40 upstream upstream NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1449 # text = Overexpression of SLP-76 in the Jurkat T cell line potentiates the activities of both nuclear factor of activated T cells and AP-1 transcription factors. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 76 76 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activities activity NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1450 # text = In contrast, overexpression of Vav leads to enhanced nuclear factor of activated T cells activity without affecting AP-1. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Vav Vav PROPN NNP Number=Sing _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 without without SCONJ IN _ _ _ _ _ 18 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1451 # text = Additionally, overexpression of Vav, but not SLP-76, augments CD28-induced IL-2 promoter activity. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 augments augment NOUN NNS Number=Plur _ _ _ _ 14 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1452 # text = These findings suggest that the synergy between SLP-76 and Vav in regulating IL-2 gene expression reflects the cooperation between different signaling pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 synergy synergy NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 76 76 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Vav Vav PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 different different ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1453 # text = Document 00300146 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300146 00300146 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1454 # text = Human immunodeficiency virus type-2 gene expression: two enhancers and their activation by T-cell activators. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1455 # text = The human immunodeficiency viruses (HIVs) may include a spectrum of retroviruses with varying potential to infect their host, undergo long periods of latent infection, and induce pathology. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 viruses viruse NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HIVs HIV NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 include include VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 varying vary NOUN NN Number=Sing _ _ _ _ 16 potential potential NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 infect infect VERB VB VerbForm=Inf _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 undergo undergo ADV RB _ _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 periods periods NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 latent latent ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 induce induce ADJ JJ Degree=Pos _ _ _ _ 31 pathology pathology NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1456 # text = Since expression of the viruses is in large part regulated by the sequence elements in their long terminal repeats (LTRs), this study was directed to an analysis of the regulatory elements in the HIV-2 LTR. 1 Since since ADP IN _ _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viruses viruse NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 large large ADJ JJ Degree=Pos _ _ _ _ 9 part part NOUN NN Number=Sing _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeats repeat NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LTRs LTR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 study study NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 analysis analysis NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1457 # text = The HIV-2 LTR was found to contain two enhancers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 LTR Ltr NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 contain contain VERB VB VerbForm=Inf _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1458 # text = One of these enhancers is, in part, identical to the HIV-1 enhancer. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 identical identical ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1459 # text = This enhancer in HIV-1 is the T-cell activation response element; in HIV-2, however, it is the second enhancer that is mainly responsible for activation in response to T-cell activators. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 however however ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 mainly mainly ADV RB _ _ _ _ _ 30 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1460 # text = The second enhancer interacts with two nuclear binding proteins (85 kD and 27 kD mobility) that appear to be required for optimal enhancer function and activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 interacts interact NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 85 85 NUM CD NumType=Card _ _ _ _ 12 kD kD NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 27 27 NUM CD NumType=Card _ _ _ _ 15 kD kd NOUN NN Number=Sing _ _ _ _ 16 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1461 # text = Observations such as these encourage the speculation that there may be subtle differences in the regulation of HIV-1 and HIV-2 expression that may be relevant to the possible longer latency and reduced pathogenicity of HIV-2. 1 Observations observation NOUN NNS Number=Plur _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 encourage encourage NOUN NN Number=Sing _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 speculation speculation NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 there there PRON EX _ _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be VERB VB VerbForm=Inf _ _ _ _ 12 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 possible possible ADJ JJ Degree=Pos _ _ _ _ 33 longer longer ADV RBR Degree=Cmp _ _ _ _ 34 latency latency ADV RB _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 pathogenicity pathogenicity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1462 # text = Document 00300147 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300147 00300147 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1463 # text = Vitamin 1 Vitamin Vitamin PROPN NNP Number=Sing _ _ _ _ # sent_id = 1464 # text = E therapy of acute CCl4-induced hepatic injury in mice is associated with inhibition of nuclear factor kappa B binding. 1 E e NOUN NN Number=Sing _ _ _ _ 2 therapy therapy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 acute acute NOUN NN Number=Sing _ _ _ _ 5 CCl4 CCl4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 9 injury injury NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1465 # text = Oxidative stress, with reactive oxygen intermediate formation, may represent a common mechanism by which liver injury is induced by diverse etiologies. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 6 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 7 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 represent represent VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 common common ADJ JJ Degree=Pos _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 which which DET WDT PronType=Int _ _ _ _ 17 liver liver NOUN NN Number=Sing _ _ _ _ 18 injury injury NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 23 etiologies etiology NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1466 # text = Oxidative stress enhances nuclear factor kappa B (NF-kappa B) activity, and NF-kappa B activity has been shown to enhance the expression of cytotoxic cytokines. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ _ 3 enhances enhance NOUN NNS Number=Plur _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1467 # text = Acute hepatic injury caused by reactive oxygen intermediate production was induced by an intraperitoneal injection of CCl4 in mice. 1 Acute Acute ADV RB _ _ _ _ _ 2 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 3 injury injury NOUN NN Number=Sing _ _ _ _ 4 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 7 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 8 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 intraperitoneal intraperitoneal ADJ JJ Degree=Pos _ _ _ _ 15 injection injection NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CCl4 Ccl4 NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1468 # text = This injury was significantly inhibited by intravenous pretreatment of the mice with a water-soluble emulsion of alpha-tocopherol. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 injury injury NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 intravenous intravenous ADJ JJ Degree=Pos _ _ _ _ 8 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 water water NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 17 emulsion emulsion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 tocopherol tocopherol NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1469 # text = Alpha-tocopherol treatment of the mice given the CCl4 also reduced the NF-kappa B binding to levels approaching those found in normal mice. 1 Alpha Alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CCl4 CCl4 PROPN NNP Number=Sing _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 approaching approach VERB VBG VerbForm=Ger _ _ _ _ 22 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1470 # text = In vitro treatment of a monocyte/macrophage cell line with CCl4 led to enhanced NF-kappa B binding and an increase in tumor necrosis factor-alpha (TNF-alpha) messenger RNA levels. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CCl4 CCl4 PROPN NNP Number=Sing _ _ _ _ 13 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 messenger messenger NOUN NN Number=Sing _ _ _ _ 36 RNA RNA ADP IN _ _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1471 # text = Liver specimens taken from patients with acute fulminant hepatitis had markedly increased NF-kappa B binding activity in comparison with the binding of normal livers. 1 Liver liver PROPN NNP Number=Sing _ _ _ _ 2 specimens specimen NOUN NNS Number=Plur _ _ _ _ 3 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 patients patient NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 acute acute ADJ JJ Degree=Pos _ _ _ _ 8 fulminant fulminant ADJ JJ Degree=Pos _ _ _ _ 9 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 10 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 comparison comparison NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 binding binding NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 livers liver NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1472 # text = These data demonstrate that abolishing acute hepatic injury with alpha-tocopherol, a free radical scavenger, also eliminated increased NF-kappa B binding. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 abolishing abolish VERB VBG VerbForm=Ger _ _ _ _ 6 acute acute ADV RB _ _ _ _ _ 7 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 8 injury injury NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 tocopherol tocopherol NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 radical radical ADJ JJ Degree=Pos _ _ _ _ 17 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1473 # text = It is tempting to speculate that enhanced NF-kappa B expression caused by free radical production/oxidative stress may modulate liver injury, perhaps through an effect on cytotoxic cytokine synthesis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 tempting tempt VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 speculate speculate VERB VB VerbForm=Inf _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 radical radical ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 23 liver liver NOUN NN Number=Sing _ _ _ _ 24 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 perhaps perhaps ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1474 # text = Document 00300148 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300148 00300148 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1475 # text = Limited proteolysis for assaying ligand binding affinities of nuclear receptors. 1 Limited limited ADJ JJ Degree=Pos _ _ _ _ 2 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 3 for for SCONJ IN _ _ _ _ _ 4 assaying assay VERB VBG VerbForm=Ger _ _ _ _ 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 affinities affinity NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1476 # text = The binding of natural or synthetic ligands to nuclear receptors is the triggering event leading to gene transcription activation or repression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 natural natural ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 ligands ligand NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 triggering triggering NOUN NN Number=Sing _ _ _ _ 14 event event NOUN NN Number=Sing _ _ _ _ 15 leading lead VERB VBG VerbForm=Ger _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 gene gene VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1477 # text = Ligand binding to the ligand binding domain of these receptors induces conformational changes that are evidenced by an increased resistance of this domain to proteases. 1 Ligand Ligand PROPN NNP Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 binding binde VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 induces induces NOUN NNS Number=Plur _ _ _ _ 12 conformational conformational ADJ JJ Degree=Pos _ _ _ _ 13 changes change NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 evidenced evidence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 resistance resistance NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1478 # text = In vitro labeled receptors were incubated with various synthetic or natural agonists or antagonists and submitted to trypsin digestion. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ _ 3 labeled label VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 natural natural ADJ JJ Degree=Pos _ _ _ _ 12 agonists agonist NOUN NNS Number=Plur _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 submitted submit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 trypsin trypsin VERB VB VerbForm=Inf _ _ _ _ 19 digestion digestion NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1479 # text = Proteolysis products were separated by SDS-PAGE and quantified. 1 Proteolysis Proteolysis PROPN NNP Number=Sing _ _ _ _ 2 products product NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 SDS SDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 PAGE page PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 quantified quantify ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1480 # text = The amount of trypsin-resistant fragments was proportional to receptor occupancy by the ligand, and allowed the determination of dissociation constants (kDa). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amount amount NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 trypsin- trypsin- SYM NFP _ _ _ _ SpaceAfter=No 5 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 6 fragments fragment NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 proportional proportional ADJ JJ Degree=Pos _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 receptor receptor VERB VB VerbForm=Inf _ _ _ _ 11 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 determination determination NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 22 constants constant NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1481 # text = Using the wild-type or mutated human retinoic acid receptor alpha as a model, kDa values determined by classical competition binding assays using tritiated ligands are in agreement with those measured by the proteolytic assay. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 kDa kDa PROPN NNP Number=Sing _ _ _ _ 18 values value NOUN NNS Number=Plur _ _ _ _ 19 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 classical classical ADJ JJ Degree=Pos _ _ _ _ 22 competition competition NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 assays assay NOUN NNS Number=Plur _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 tritiated tritiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 ligands ligand NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 agreement agreement NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 33 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1482 # text = This method was successfully extended to human retinoic X receptor alpha, glucocorticoid receptor, and progesterone receptor, thus providing a basis for a new, faster assay to determine simultaneously the affinity and conformation of receptors when bound to a given ligand. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 method method NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 successfully successfully ADV RB _ _ _ _ _ 5 extended extend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 retinoic retinoic NOUN NN Number=Sing _ _ _ _ 9 X x SYM SYM _ _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 providing provide VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 basis basis NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 faster faster ADJ JJR Degree=Cmp _ _ _ _ 29 assay assay NOUN NN Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 determine determine VERB VB VerbForm=Inf _ _ _ _ 32 simultaneously simultaneously ADV RB _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 affinity affinity NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 conformation conformation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 receptors receptor NOUN NNS Number=Plur _ _ _ _ 39 when when ADV WRB PronType=Int _ _ _ _ 40 bound bound ADJ JJ Degree=Pos _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1483 # text = Document 00300149 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300149 00300149 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1484 # text = Isolation of a candidate repressor/activator, NF-E1 (YY-1, delta), that binds to the immunoglobulin kappa 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 candidate candidate NOUN NN Number=Sing _ _ _ _ 5 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 E1 E1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 YY YY INTJ UH _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 1485 # text = 3' enhancer and the immunoglobulin heavy-chain mu E1 site. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 ' ' PUNCT `` _ _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 mu mu NOUN NN Number=Sing _ _ _ _ 11 E1 E1 NUM CD NumType=Card _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1486 # text = We have determined that the developmental control of immunoglobulin kappa 3' enhancer (kappa E3') activity is the result of the combined influence of positive- and negative-acting elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ' ' PUNCT `` _ _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 result result NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 influence influence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 acting acting VERB VBG VerbForm=Ger _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1487 # text = We show that a central core in the kappa E3' enhancer is active at the pre-B-cell stage but is repressed by flanking negative-acting elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 core core NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pre pre X AFX _ _ _ _ SpaceAfter=No 18 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 stage stage NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 acting acting VERB VBG VerbForm=Ger _ _ _ _ 30 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1488 # text = The negative-acting sequences repress enhancer activity in a position- and orientation-independent manner at the pre-B-cell stage. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting act VERB VBG VerbForm=Ger _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 repress repress NOUN NN Number=Sing _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 manner manner NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 pre pre X AFX _ _ _ _ SpaceAfter=No 21 -B -b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1489 # text = We have isolated a human cDNA clone encoding a zinc finger protein (NF-E1) that binds to the negative-acting segment of the kappa E3' enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 7 clone clone NOUN NN Number=Sing _ _ _ _ 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 finger finger NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 acting act VERB VBG VerbForm=Ger _ _ _ _ 25 segment segment NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ' ' PUNCT '' _ _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1490 # text = This protein also binds to the immunoglobulin heavy-chain enhancer mu E1 site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 8 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 mu mu NOUN NN Number=Sing _ _ _ _ 13 E1 E1 NUM CD NumType=Card _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1491 # text = NF-E1 is encoded by the same gene as the YY-1 protein, which binds to the adeno-associated virus P5 promoter. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 E1 E1 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 same same ADJ JJ Degree=Pos _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 YY YY NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adeno adeno NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 P5 p5 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1492 # text = NF-E1 is also the human homologue of the mouse delta protein, which binds to ribosomal protein gene promoters. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 E1 E1 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 homologue homologue NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 delta delta NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 ribosomal ribosomal VERB VB VerbForm=Inf _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1493 # text = The predicted amino acid sequence of this protein contains features characteristic of transcriptional activators as well as transcriptional repressors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 amino amino DET DT _ _ _ _ _ 4 acid acid ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 features feature NOUN NNS Number=Plur _ _ _ _ 11 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activators activator NOUN NNS Number=Plur _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 repressors repressor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1494 # text = Cotransfection studies with this cDNA indicate that it can repress basal promoter activity. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 repress repress VERB VB VerbForm=Inf _ _ _ _ 11 basal basal ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1495 # text = The apparent dual function of this protein is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 3 dual dual ADJ JJ Degree=Pos _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1496 # text = Document 00300150 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300150 00300150 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1497 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 1498 # text = A interferes with the inducible degradation of NF-kappa B inhibitors, but not with the processing of p105/NF-kappa B1 in T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 interferes interfere NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 processing processing NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B1 b1 PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1499 # text = The transcription factor NF-kappa B controls the induction of numerous cytokine promoters during the activation of T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 promoters promoter NOUN NNS Number=Plur _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1500 # text = Inhibition of T cell activation by the immunosuppressants cyclosporin A (CsA) and FK506 exerts a suppressive effect on the induction of these NF-kappa B-controlled cytokine promoters. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 9 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 10 A A PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 FK506 FK506 NUM CD NumType=Card _ _ _ _ 16 exerts exert NOUN NNS Number=Plur _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1501 # text = We show for human Jurkat T leukemia cells, as well as human and mouse primary T lymphocytes, that this inhibitory effect is accompanied by an impaired nuclear translocation of the Rel proteins c-Rel, RelA/p65 and NF-kappa B1/p50, whereas the nuclear appearance of RelB remains unaffected. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 mouse mouse VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 T t NOUN NN Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 translocation translocation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Rel Rel PROPN NNP Number=Sing _ _ _ _ 34 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 p65 p65 NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B1/ b1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 47 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 whereas whereas SCONJ IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 52 appearance appearance NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 RelB RelB PROPN NNP Number=Sing _ _ _ _ 55 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1502 # text = CsA does not interfere with the synthesis of Rel proteins, but prevents the inducible degradation of cytosolic NF-kappa B inhibitors I kappa B alpha and I kappa B beta upon T cell activation. 1 CsA csa NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 inhibitors inhibitor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 beta beta PROPN NNP Number=Sing _ _ _ _ 33 upon upon ADP IN _ _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1503 # text = CsA neither inhibits the processing of the NF-kappa B1 precursor p105 to p50, nor does it "stabilize" the C-terminal portion of p105, I kappa 1 CsA csa ADP IN _ _ _ _ _ 2 neither neither DET DT _ _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 processing processing NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B1 B1 PROPN NNP Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 p105 p105 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 " " PUNCT `` _ _ _ _ SpaceAfter=No 21 stabilize stabilize VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 " " PUNCT '' _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 portion portion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 1504 # text = B gamma, which is degraded during p105 processing to mature p50. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 p105 p105 NUM CD NumType=Card _ _ _ _ 9 processing process NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 mature mature ADJ JJ Degree=Pos _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1505 # text = These results indicate that CsA interferes with a specific event in the signal-induced degradation of I kappa B alpha and I kappa B beta, but does not affect the processing of NF-kappa B1/p105 to p50. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CsA csa PROPN NNP Number=Sing _ _ _ _ 6 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 event event NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 affect affect VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 processing processing NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B1/p105 b1/p105 PROPN NNP Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1506 # text = Document 00300151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300151 00300151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1507 # text = Structural and functional characterization of the human CD36 gene promoter: identification of a proximal PEBP2/CBF site. 1 Structural Structural ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CD36 Cd36 NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 identification identification NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 16 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 CBF CBF NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1508 # text = CD36 is a cell surface glycoprotein composed of a single polypeptide chain, which interacts with thrombospondin, collagens type I and IV, oxidized low density lipoprotein, fatty acids, anionic phospholipids, and erythrocytes parasitized with Plasmodium falciparum. 1 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 7 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 single single ADJ JJ Degree=Pos _ _ _ _ 11 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 thrombospondin thrombospondin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 collagens collagen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 oxidized oxidize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 low low ADJ JJ Degree=Pos _ _ _ _ 27 density density NOUN NN Number=Sing _ _ _ _ 28 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 fatty fatty NOUN NN Number=Sing _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 34 phospholipids phospholipid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 38 parasitized parasitize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 Plasmodium Plasmodium NOUN NN Number=Sing _ _ _ _ 41 falciparum falciparum NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1509 # text = Its expression is restricted to a few cell types, including monocyte/macrophages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 2 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 few few ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1510 # text = In these cells, CD36 is involved in phagocytosis of apoptotic cells, and foam cell formation by uptake of oxidized low density lipoprotein. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 foam foam NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 formation formation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 uptake uptake NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 oxidized oxidized ADJ JJ Degree=Pos _ _ _ _ 22 low low ADJ JJ Degree=Pos _ _ _ _ 23 density density NOUN NN Number=Sing _ _ _ _ 24 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1511 # text = To study the molecular mechanisms that control the transcription of the CD36 gene in monocytic cells we have isolated and analyzed the CD36 promoter. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 36 36 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1512 # text = Transient expression experiments of 5'-deletion fragments of the CD36 promoter coupled to luciferase demonstrated that as few as 158 base pairs upstream from the transcription initiation site were sufficient to direct the monocyte-specific transcription of the reporter gene. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 fragments fragment NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 36 36 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 18 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 few few ADJ JJ Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 158 158 NUM CD NumType=Card _ _ _ _ 24 base base NOUN NN Number=Sing _ _ _ _ 25 pairs pair NOUN NNS Number=Plur _ _ _ _ 26 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 direct direct VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 reporter reporter NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1513 # text = Within the above region, the fragment spanning nucleotides -158 to -90 was required for optimal transcription in monocytic cells. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 above above ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 9 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 158 158 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 90 90 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1514 # text = Biochemical analysis of the region -158/-90 revealed a binding site for transcription factors of the polyomavirus enhancer-binding protein 2/core-binding factor (PEBP2/CBF) family at position -103. 1 Biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 158/-90 158/-90 NUM CD NumType=Card _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 core-binding core-binding VERB VBG VerbForm=Ger _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PEBP2/ PEBP2ith NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 CBF CBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 position position NOUN NN Number=Sing _ _ _ _ 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 103 103 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1515 # text = Disruption of the PEBP2/CBF site markedly diminished the role of the PEBP2/CBF factors in the constitutive transcription of the CD36 gene. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 CBF CBF NOUN NN Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 markedly markedly ADV RB _ _ _ _ _ 8 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 CBF Cbf NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 36 36 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1516 # text = The involvement of members of the PEBP2/CBF family in chromosome translocations associated with acute myeloid leukemia, and in the transcriptional regulation of the myeloid-specific genes encoding for myeloperoxidase, elastase, and the colony-stimulating factor receptor, highlights the relevance of the regulation of the CD36 gene promoter in monocytic cells by members of the PEBP2/CBF family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 members member NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CBF CBF NOUN NN Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 12 translocations translocation NOUN NNS Number=Plur _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 acute acute NOUN NN Number=Sing _ _ _ _ 16 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 elastase elastase NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 highlights highlight VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 relevance relevance NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 regulation regulation NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 53 gene gene NOUN NN Number=Sing _ _ _ _ 54 promoter promoter NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ _ 58 by by ADP IN _ _ _ _ _ 59 members member NOUN NNS Number=Plur _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 CBF CBF NOUN NN Number=Sing _ _ _ _ 64 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1517 # text = Document 00300152 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300152 00300152 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1518 # text = Transcription factor activation and functional stimulation of human monocytes. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1519 # text = Activation of expression of genes encoding transcription factors: 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ # sent_id = 1520 # text = c-fos and c-jun and formation of AP1 transcriptional complex in human monocytes was investigated. 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 fos fo NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 formation formation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AP1 AP1 NUM CD NumType=Card _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 investigated investigated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1521 # text = It was found that lipopolysaccharide induced strongly both c-fos and c-jun expression as well as AP1 formation. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 lipopolysaccharide lipopolysaccharide ADV RB _ _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 strongly strongly ADV RB _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 AP1 AP1 NUM CD NumType=Card _ _ _ _ 19 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1522 # text = Interferon gamma activated strongly c-fos and weakly c-jun and AP1. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 2 gamma gamma PROPN NNP Number=Sing _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 weakly weakly ADV RB _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1523 # text = Tumor necrosis factor induced slightly c-fos and had almost no effect on c-jun and AP1. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 slightly slightly ADV RB _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 almost almost ADV RB _ _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1524 # text = The data suggest that differences in functional responses elicited in monocytes by all three factors may be dependent on different routes on nuclear signalling employed by the factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 responses respons NOUN NNS Number=Plur _ _ _ _ 9 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 three three NUM CD NumType=Card _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 routes route NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 signalling signalling NOUN NN Number=Sing _ _ _ _ 25 employed employ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1525 # text = Document 00300153 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300153 00300153 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1526 # text = Potent and stable attenuation of live-HIV-1 by gain of a proteolysis-resistant inhibitor of NF-kappaB (IkappaB-alphaS32/36A) and the implications for vaccine development. 1 Potent potent ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 stable stable ADJ JJ Degree=Pos _ _ _ _ 4 attenuation attenuation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 live live ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 gain gain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IkappaB- IkappaB- SYM NFP _ _ _ _ SpaceAfter=No 25 alphaS32/ alphas32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 36A 36A NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 implications implication NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 vaccine vaccine NOUN NN Number=Sing _ _ _ _ 33 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1527 # text = Live-attenuated human immunodeficiency viruses (HIVs) are candidates for Acquired Immunodeficiency Syndrome (AIDS) vaccine. 1 Live Live PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 viruses viruse NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIVs HIV NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 candidates candidate NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 Acquired acquired PROPN NNP Number=Sing _ _ _ _ 14 Immunodeficiency Immunodeficiency PROPN NNP Number=Sing _ _ _ _ 15 Syndrome Syndrome PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 vaccine vaccine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1528 # text = Based on the simian immunodeficiency virus (SIV) model for AIDS, loss-of-function (e.g. deletion of accessory genes such as nef) has been forwarded as a primary approach for creating enfeebled, but replication-competent, HIV-1/SIV. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 simian simian ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 SIV SIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 model model NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 of of ADP IN _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 function function NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 e.g. e.g. X FW _ _ _ _ _ 21 deletion deletion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 nef nef NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 31 forwarded forward VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 primary primary ADJ JJ Degree=Pos _ _ _ _ 35 approach approach NOUN NN Number=Sing _ _ _ _ 36 for for SCONJ IN _ _ _ _ _ 37 creating create VERB VBG VerbForm=Ger _ _ _ _ 38 enfeebled enfeebled ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 competent competent NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 48 SIV Siv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1529 # text = Regrettably, recent evidence suggests that loss-of-function alone is not always sufficient to prevent the emergence of virulent mutants. 1 Regrettably Regrettably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 recent recent ADJ JJ Degree=Pos _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 loss lose NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 of of ADP IN _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 function function NOUN NN Number=Sing _ _ _ _ 12 alone alone ADV RB _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 always always ADV RB _ _ _ _ _ 16 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 emergence emergence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 virulent virulent ADJ JJ Degree=Pos _ _ _ _ 23 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1530 # text = New strategies that attenuate via mechanisms distinct from loss-of-function are needed for enhancing the safety phenotype of viral genome. 1 New new ADJ JJ Degree=Pos _ _ _ _ 2 strategies strategy NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 attenuate attenuate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 via via ADP IN _ _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 of of ADP IN _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 function function NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for SCONJ IN _ _ _ _ _ 17 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 safety safety NOUN NN Number=Sing _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1531 # text = Here, we propose gain-of-function to be used simultaneously with loss-of-function as a novel approach for attenuating HIV-1. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 gain gain ADV RB _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 of of ADP IN _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 function function NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 simultaneously simultaneously ADV RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 of of ADP IN _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 function function NOUN NN Number=Sing _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 novel novel NOUN NN Number=Sing _ _ _ _ 23 approach approach NOUN NN Number=Sing _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 attenuating attenuating VERB VBG VerbForm=Ger _ _ _ _ 26 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1532 # text = We have constructed an HIV-1 genome carrying the cDNA of a proteolysis-resistant nuclear factor-kappaB inhibitor (IkappaB-alphaS32/36A) in the nef region. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 genome genome NOUN NN Number=Sing _ _ _ _ 9 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 resistant resistant NOUN NN Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 IkappaB-alphaS32/ Ikappab-alphas32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 36A 36a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nef nef NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1533 # text = HIV-1 expressing IkappaB-alphaS32/36A down-regulates viral expression and is highly attenuated in both Jurkat and peripheral blood mononuclear cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 expressing expressing NOUN NN Number=Sing _ _ _ _ 5 IkappaB- IkappaB- PUNCT NFP _ _ _ _ SpaceAfter=No 6 alphaS32/36A alphaS32/36a X GW _ _ _ _ _ 7 down down X GW _ _ _ _ SpaceAfter=No 8 -regulates -regulate X GW _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1534 # text = We provide formal proof that the phenotypic and attenuating characteristics of IkappaB-alphaS32/36A permit its stable maintenance in a live, replicating HIV-1 despite 180 days of forced ex vivo passaging in tissue culture. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 formal formal ADJ JJ Degree=Pos _ _ _ _ 4 proof proof NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phenotypic phenotypic NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 attenuating attenuating VERB VBG VerbForm=Ger _ _ _ _ 10 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IkappaB- Ikappab- SYM NFP _ _ _ _ SpaceAfter=No 13 alphaS32/ alphas32/ SYM SYM _ _ _ _ SpaceAfter=No 14 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 permit permit NOUN NN Number=Sing _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 18 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 stable stable ADJ JJ Degree=Pos _ _ _ _ 20 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 live live NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 replicating replicating VERB VBG VerbForm=Ger _ _ _ _ 26 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 despite despite ADP IN _ _ _ _ _ 30 180 180 NUM CD NumType=Card _ _ _ _ 31 days day NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 forced force VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 ex ex NOUN NN Number=Sing _ _ _ _ 35 vivo vivo NOUN NN Number=Sing _ _ _ _ 36 passaging passaging VERB VBG VerbForm=Ger _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 39 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1535 # text = As compared with other open-reading frames embedded into HIV/SIV genome, this degree of stability is unprecedented. 1 As as SCONJ IN _ _ _ _ _ 2 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 open open ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 reading reading NOUN NN Number=Sing _ _ _ _ 8 frames frame NOUN NNS Number=Plur _ _ _ _ 9 embedded embed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 SIV SIV PROPN NNP Number=Sing _ _ _ _ 14 genome genome PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 degree degree NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stability stability NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unprecedented unprecedented ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1536 # text = Thus, IkappaB-alphaS32/36A offers proof-of-principle that artifactually gained functions, when used to attenuate the replication of live HIV-1, can be stable. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IkappaB- IkappaB- X GW _ _ _ _ SpaceAfter=No 4 alphaS32/36A alphaS32/36a X FW Foreign=Yes _ _ _ _ 5 offers offer X GW _ _ _ _ _ 6 proof proof ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 of of ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 principle principle NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 artifactually artifactually ADV RB _ _ _ _ _ 13 gained gain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 attenuate attenuate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 live live ADJ JJ Degree=Pos _ _ _ _ 24 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 stable stable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1537 # text = These findings illustrate gain-of-function as a feasible strategy for developing safer live-attenuated HIVs to be tested as candidates for AIDS vaccine. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 illustrate illustrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 gain gain ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 of of ADP IN _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 function function NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 feasible feasible ADJ JJ Degree=Pos _ _ _ _ 12 strategy strategy NOUN NN Number=Sing _ _ _ _ 13 for for SCONJ IN _ _ _ _ _ 14 developing develop VERB VBG VerbForm=Ger _ _ _ _ 15 safer safer ADJ JJR Degree=Cmp _ _ _ _ 16 live live NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 HIVs HIV NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 candidates candidate NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 AIDS aids NOUN NN Number=Sing _ _ _ _ 27 vaccine vaccine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1538 # text = Document 00300154 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300154 00300154 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1539 # text = Control of I kappa B-alpha proteolysis by site-specific, signal-induced phosphorylation. 1 Control Control NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X GW _ _ _ _ _ 5 B- B- X GW _ _ _ _ SpaceAfter=No 6 alpha alpha X GW _ _ _ _ _ 7 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 signal signal VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1540 # text = I kappa B-alpha inhibits transcription factor NF-kappa B by retaining it in the cytoplasm. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X GW _ _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha alpha X GW _ _ _ _ _ 5 inhibits inhibits X ADD _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 retaining retain VERB VBG VerbForm=Ger _ _ _ _ 14 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1541 # text = Various stimuli, typically those associated with stress or pathogens, rapidly inactivate I kappa B-alpha. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 typically typically ADV RB _ _ _ _ _ 5 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 rapidly rapidly ADV RB _ _ _ _ _ 13 inactivate inactivate ADJ JJ Degree=Pos _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X GW _ _ _ _ _ 16 B- B- X GW _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1542 # text = This liberates NF-kappa B to translocate to the nucleus and initiate transcription of genes important for the defense of the organism. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 liberates liberate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 initiate initiate ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 defense defense NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 organism organism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1543 # text = Activation of NF-kappa B correlates with phosphorylation of I kappa B-alpha and requires the proteolysis of this inhibitor. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B- B- SYM SYM _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1544 # text = When either serine-32 or serine-36 of I kappa B-alpha was mutated, the protein did not undergo signal-induced phosphorylation or degradation, and NF-kappa B could not be activated. 1 When when ADV WRB PronType=Int _ _ _ _ 2 either either CCONJ CC _ _ _ _ _ 3 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 32 32 NUM CD NumType=Card _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 36 36 NUM CD NumType=Card _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B- B- PUNCT , _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 undergo undergo ADV RB _ _ _ _ _ 23 signal signal VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 could could AUX MD VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1545 # text = These results suggest that phosphorylation at one or both of these residues is critical for activation of NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 residues residue NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1546 # text = Document 00300155 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300155 00300155 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1547 # text = TAR-independent transactivation by 1 TAR Tar ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 independent independent ADJ JJ Degree=Pos _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ # sent_id = 1548 # text = Tat in cells derived from the CNS: a novel mechanism of HIV-1 gene regulation. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CNS Cn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 novel novel NOUN NN Number=Sing _ _ _ _ 11 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1549 # text = The Tat protein of human immunodeficiency virus type 1 (HIV-1) is essential for productive infection and is a potential target for antiviral therapy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tat Tat PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 productive productive ADJ JJ Degree=Pos _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 potential potential ADJ JJ Degree=Pos _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 27 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1550 # text = Tat, a potent activator of HIV-1 gene expression, serves to greatly increase the rate of transcription directed by the viral promoter. 1 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 greatly greatly ADV RB _ _ _ _ _ 16 increase increase VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 rate rate NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1551 # text = This induction, which seems to be an important component in the progression of acquired immune deficiency syndrome (AIDS), may be due to increased transcriptional initiation, increased transcriptional elongation, or a combination of these processes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 progression progression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 acquired acquire ADJ JJ Degree=Pos _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 elongation elongation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 combination combination NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 40 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1552 # text = Much attention has been focused on the interaction of Tat with a specific RNA target termed TAR (transactivation responsive) which is present in the leader sequence of all HIV-1 mRNAs. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 attention attention NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 focused focus VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Tat Tat NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 RNA RNa PROPN NNP Number=Sing _ _ _ _ 15 target target AUX VB VerbForm=Inf _ _ _ _ 16 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 TAR Tar NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 20 responsive responsive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 leader leader NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 all all DET DT _ _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1553 # text = This interaction is believed to be an important component of the mechanism of transactivation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1554 # text = In this report we demonstrate that in certain CNS-derived cells 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 certain certain ADJ JJ Degree=Pos _ _ _ _ 9 CNS CNS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ # sent_id = 1555 # text = Tat is capable of activating HIV-1 through a TAR-independent pathway. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 capable capable ADJ JJ Degree=Pos _ _ _ _ 4 of of SCONJ IN _ _ _ _ _ 5 activating activate VERB VBG VerbForm=Ger _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 TAR Tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1556 # text = A Tat-responsive element is found upstream within the viral promoter that in glial-derived cell lines allows transactivation in the absence of TAR. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 glial glial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 TAR TAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1557 # text = Deletion mapping and hybrid promoter constructs demonstrate that the newly identified Tat-responsive element corresponds to a sequence within the viral long terminal repeat (LTR) previously identified as the HIV-1 enhancer, or NF-kappa B domain. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 mapping mapping NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 newly newly ADV RB _ _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 terminal terminal NOUN NN Number=Sing _ _ _ _ 25 repeat repeat NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 previously previously ADV RB _ _ _ _ _ 30 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1558 # text = DNA band-shift analysis reveals NF-kappa B binding activity in glial cells that differs from that present in T lymphoid cells. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 band band NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 reveals reveal NOUN NNS Number=Plur _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 binding binde VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 glial glial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 differs differ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 present present NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1559 # text = Further, we observe that TAR-deleted mutants of HIV-1 demonstrate normal late gene expression in glial cells as evidenced by syncytia formation and production of viral p24 antigen. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 observe observe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 mutants mutant NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 late late ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 syncytia syncytia NOUN NN Number=Sing _ _ _ _ 26 formation formation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 p24 p24 NOUN NN Number=Sing _ _ _ _ 32 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1560 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1561 # text = Document 00300156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300156 00300156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1562 # text = Biphasic control of nuclear factor-kappa B activation by the T cell receptor complex: role of tumor necrosis factor alpha. 1 Biphasic Biphasic ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1563 # text = The regulation of nuclear factor (NF)-kappa B activation by the T cell receptor (TcR)/CD3 complex in primary human T cells has been studied at various times after activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 /CD3 /CD3 NUM CD NumType=Card _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 primary primary ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 various various ADJ JJ Degree=Pos _ _ _ _ 33 times time NOUN NNS Number=Plur _ _ _ _ 34 after after ADP IN _ _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1564 # text = Only p50 NF-kappa B protein bound the kappa B element of interleukin-2 receptor (IL-2R) alpha chain promoter on resting T cells. 1 Only only ADV RB _ _ _ _ _ 2 p50 p50 NUM CD NumType=Card _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 bound bound ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2R 2r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 on on SCONJ IN _ _ _ _ _ 27 resting rest VERB VBG VerbForm=Ger _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1565 # text = However, immediately after TcR/CD3 cross-linking (after approximately 1 h; immediate) binding of p50.p65 heterodimers was observed. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immediately immediately ADV RB _ _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 TcR/ TcR/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 7 cross-linking cross-linking NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 after after ADP IN _ _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p50.p65 p50.p65 NOUN NN Number=Sing _ _ _ _ 19 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 observed observed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1566 # text = p50.c-rel heterodimers were also detected bound to this sequence at early time points (7-16 h; early), and both remained active at later time points (40 h; late) after activation. 1 p50.c p50.c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -rel -rel ADJ JJ Degree=Pos _ _ _ _ 3 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 bound bound ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ _ 14 points point NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 16 16 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 early early ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 both both ADV RB _ _ _ _ _ 26 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 active active ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 later later ADJ JJR Degree=Cmp _ _ _ _ 30 time time NOUN NN Number=Sing _ _ _ _ 31 points point NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 40 40 NUM CD NumType=Card _ _ _ _ 34 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 after after ADP IN _ _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1567 # text = This regulation takes place mainly at the level of nuclear translocation of p65 and c-rel, at immediate and early time points. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 takes take VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 place place NOUN NN Number=Sing _ _ _ _ 5 mainly mainly ADV RB _ _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 rel rel ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 time time NOUN NN Number=Sing _ _ _ _ 23 points point NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1568 # text = Activation also induced c-rel and p105/p50 mRNA synthesis, but not p65 mRNA whose expression was constitutive. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 rel rel NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 p65 p65 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 17 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1569 # text = Interestingly, all those early and late events, but not the immediate ones, were inhibited by a neutralizing anti-tumor necrosis factor alpha (TNF-alpha) monoclonal antibody. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 late late ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 14 ones one NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 neutralizing neutralize NOUN NN Number=Sing _ _ _ _ 21 anti-tumor anti-tumor ADP IN _ _ _ _ _ 22 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 31 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1570 # text = Similarly, cycloheximide prevented the p65 and c-rel translocation and consequent formation of active binding heterodimers, at early and late times. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 4 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p65 p65 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 rel rel NOUN NN Number=Sing _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 late late ADJ JJ Degree=Pos _ _ _ _ 23 times time NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1571 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 1572 # text = A impaired not only early and late, but also immediate events; however, addition of TNF-alpha prevented all inhibition. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 3 not not ADV RB _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 however however ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha X FW Foreign=Yes _ _ _ _ 21 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 all all DET DT _ _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1573 # text = These results indicate that the regulation of NF-kappa B activation during T cell activation by TcR/CD3 signals is biphasic: TcR/CD3 triggers its immediate translocation, which is transient if no TNF-alpha is present. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TcR/CD3 TcR/CD3 NUM CD NumType=Card _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 biphasic biphasic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 TcR/CD3 TcR/CD3 NUM CD NumType=Card _ _ _ _ 24 triggers trigger NOUN NNS Number=Plur _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 27 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 transient transient VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 if if SCONJ IN _ _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1574 # text = TNF-alpha, therefore, emerges as the main factor responsible for a second phase of NF-kappa B regulation, controlling both translocation of p65 and c-rel, and new mRNA synthesis for c-rel and p105/p50. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 emerges emerge NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 main main ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p65 p65 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 new new ADJ JJ Degree=Pos _ _ _ _ 35 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 36 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 c- c- SYM NFP _ _ _ _ SpaceAfter=No 39 rel rel NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1575 # text = Document 00300157 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300157 00300157 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1576 # text = Transcriptional and post-transcriptional regulation of c-jun expression during monocytic differentiation of human myeloid leukemic cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 post post X AFX _ _ _ _ SpaceAfter=No 4 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1577 # text = AP-1, the polypeptide product of c-jun, recognizes and binds to specific DNA sequences and stimulates transcription of genes responsive to certain growth factors and phorbol esters such as 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 certain certain ADJ JJ Degree=Pos _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 esters ester NOUN NNS Number=Plur _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 O of INTJ UH _ _ _ _ SpaceAfter=No 37 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 38 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1578 # text = We studied the effects of TPA on the regulation of c-jun gene expression in HL-60 cells during monocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 TPA TPA NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 60 60 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1579 # text = Low levels of c-jun transcripts were detectable in untreated HL-60 leukemic cells, increased significantly by 6 h, and reached near maximal levels by 24 h of exposure to 32 nM TPA. 1 Low low VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun ADJ JJ Degree=Pos _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 11 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 6 6 NUM CD NumType=Card _ _ _ _ 21 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 reached reach VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 near near ADP IN _ _ _ _ _ 26 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 24 24 NUM CD NumType=Card _ _ _ _ 30 h h NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 exposure exposure NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 32 32 NUM CD NumType=Card _ _ _ _ 35 nM nM PROPN NNP Number=Sing _ _ _ _ 36 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1580 # text = Similar kinetics of c-jun induction by TPA were observed in human U-937 and THP-1 monocytic leukemia cells. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TPA TPA PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 937 937 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1581 # text = Similar findings were obtained with bryostatin 1 (10 nM), another activator of protein kinase C and inducer of monocytic differentiation. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 bryostatin bryostatin NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 nM nm NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 another another DET DT _ _ _ _ _ 14 activator activator NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C c NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 inducer inducer NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1582 # text = Furthermore, 1,25-dihydroxyvitamin D3 (0.5 microM), a structurally distinct agent which also induces HL-60 monocytic differentiation, increased c-jun expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 6 D3 D3 NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 0.5 0.5 NUM CD NumType=Card _ _ _ _ 9 microM microm NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 structurally structurally ADV RB _ _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 agent agent NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 60 60 NUM CD NumType=Card _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 c- c- SYM SYM _ _ _ _ SpaceAfter=No 27 jun jun ADJ JJ Degree=Pos _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1583 # text = TPA treatment of HL-60 cells in the presence of cycloheximide was associated with superinduction of c-jun transcripts. 1 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 60 60 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 superinduction superinduction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1584 # text = Run-on analysis demonstrated detectable levels of c-jun gene transcription in untreated HL-60 cells, and that exposure to TPA increases this rate 3.3-fold. 1 Run run PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 on on ADP IN _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 15 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 60 60 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 TPA TPA PROPN NNP Number=Sing _ _ _ _ 25 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 rate rate NOUN NN Number=Sing _ _ _ _ 28 3.3 3.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1585 # text = Treatment of HL-60 cells with both TPA and cycloheximide had no effect on the rates of c-jun transcription. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 TPA TPa NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rates rate NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1586 # text = The half-life of c-jun RNA as determined by treating HL-60 cells with TPA and actinomycin D was 30 min. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 life life NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 jun jun PROPN NNP Number=Sing _ _ _ _ 8 RNA RNa PROPN NNP Number=Sing _ _ _ _ 9 as as ADV RB _ _ _ _ _ 10 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 treating treat VERB VBG VerbForm=Ger _ _ _ _ 13 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 60 60 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 TPA TPa PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 actinomycin actinomycin PROPN NNP Number=Sing _ _ _ _ 21 D d PROPN NNP Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 30 30 NUM CD NumType=Card _ _ _ _ 24 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1587 # text = In contrast, the half-life of c-jun RNA in TPA-treated HL-60 cells exposed to cycloheximide and actinomycin D was greater than 2 h. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 life life NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- PUNCT : _ _ _ _ SpaceAfter=No 10 jun jun PROPN NNP Number=Sing _ _ _ _ 11 RNA RNA PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 60 60 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 cycloheximide cycloheximide VERB VB VerbForm=Inf _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 actinomycin actinomycin VERB VB VerbForm=Inf _ _ _ _ 25 D d PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 greater greater ADJ JJR Degree=Cmp _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1588 # text = These findings suggested that the increase in c-jun RNA observed during TPA-induced monocytic differentiation is mediated by both transcriptional and post-transcriptional mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun PROPN NNP Number=Sing _ _ _ _ 10 RNA RNA PROPN NNP Number=Sing _ _ _ _ 11 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 post post X AFX _ _ _ _ SpaceAfter=No 25 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1589 # text = Document 00300158 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300158 00300158 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1590 # text = Differential regulation of proto-oncogenes c-jun and c-fos in T lymphocytes activated through CD28. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 jun jun NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 c- c- PUNCT : _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1591 # text = The T cell surface molecule CD28 binds to ligands on accessory cells and APCs, playing an important costimulatory role in the response of T cells to Ags. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 molecule molecule NOUN NN Number=Sing _ _ _ _ 6 CD28 CD28 NUM CD NumType=Card _ _ _ _ 7 binds bind NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 ligands ligand NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 APCs APC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 playing play VERB VBG VerbForm=Ger _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 Ags ag NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1592 # text = Our knowledge of the intracellular signaling pathways coupled to this receptor is incomplete. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 knowledge knowledge NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 incomplete incomplete ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1593 # text = In addition to activation of phospholipase C gamma 1, ligation of this receptor also seems to activate a calcium-independent, CD28-specific pathway. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ligation ligation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1594 # text = In this paper, we report that cross-linking of CD28 (but not CD2, CD5, LFA-1, or CD7) leads to an elevation of c-jun mRNA, with only minimal activation of c-fos expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -linking -link NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 CD2 CD2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 CD5 CD5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 CD7 CD7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 elevation elevation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 c- c- SYM NFP _ _ _ _ SpaceAfter=No 32 jun jun NOUN NN Number=Sing _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 only only ADV RB _ _ _ _ _ 37 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 fos fo NOUN NNS Number=Plur _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1595 # text = CD28-dependent induction of c-jun expression requires protein tyrosine kinase activity, but does not depend on activation of a phorbol ester-responsive protein kinase C or elevation of cytosolic calcium. 1 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 depend depend VERB VB VerbForm=Inf _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 C c NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 elevation elevation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1596 # text = Furthermore, CD28-dependent elevation of c-jun mRNA does not appear to be mediated at the level of mRNA stability. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 5 elevation elevation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 appear appear VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 21 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1597 # text = A mechanism is suggested whereby expression of c-jun and junB, in the absence of members of the fos family, can prevent inappropriate activation of T cells caused by ligation of CD28 in the absence of a specific antigenic stimulus. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 whereby whereby ADP IN _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 junB junb NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 absence absence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 members member NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 25 inappropriate inappropriate ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 ligation ligation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 absence absence NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 specific specific ADJ JJ Degree=Pos _ _ _ _ 41 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 42 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1598 # text = Document 00300159 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300159 00300159 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1599 # text = Antioxidants inhibit monocyte adhesion by suppressing nuclear factor-kappa B mobilization and induction of vascular cell adhesion molecule-1 in endothelial cells stimulated to generate radicals. 1 Antioxidants Antioxidant NOUN NNS Number=Plur _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 generate generate VERB VB VerbForm=Inf _ _ _ _ 28 radicals radical NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1600 # text = Cell adhesion to endothelial cells stimulated by tumor necrosis factor-alpha (TNF) is due to induction of surface receptors, such as vascular cell adhesion molecule-1 (VCAM-1). 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1601 # text = The antioxidant pyrrolidine dithiocarbamate (PDTC) specifically inhibits activation of nuclear factor-kappa B (NF-kappa B). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 3 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 4 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1602 # text = Since kappa B motifs are present in VCAM-1 and intercellular adhesion molecule-1 (ICAM-1) promoters, we used PDTC to study the regulatory mechanisms of VCAM-1 and ICAM-1 induction and subsequent monocyte adhesion in TNF-treated human umbilical vein endothelial cells (HUVECs). 1 Since since ADP IN _ _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 motifs motif NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 study study VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 43 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 51 vein vein NOUN NN Number=Sing _ _ _ _ 52 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1603 # text = PDTC or N-acetylcysteine dose dependently reduced TNF-induced VCAM-1 but not ICAM-1 surface protein (also in human umbilical arterial endothelial cells) and mRNA expression (by 70% at 100 mumol/L PDTC) in HUVECs as assessed by flow cytometry and polymerase chain reaction. 1 PDTC Pdtc NOUN NN Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 N- N- PUNCT : _ _ _ _ SpaceAfter=No 4 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 5 dose dose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 dependently dependently ADV RB _ _ _ _ _ 7 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 surface surface NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 also also ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 26 arterial arterial NOUN NN Number=Sing _ _ _ _ 27 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 by by ADP IN _ _ _ _ _ 35 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 % % SYM NN Number=Sing _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 100 100 NUM CD NumType=Card _ _ _ _ 39 mumol/L mumol/L PROPN NNP Number=Sing _ _ _ _ 40 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HUVECs Huvecs PROPN NNP Number=Sing _ _ _ _ 44 as as SCONJ IN _ _ _ _ _ 45 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 flow flow NOUN NN Number=Sing _ _ _ _ 48 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 51 chain chain NOUN NN Number=Sing _ _ _ _ 52 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1604 # text = Gel-shift analysis in HUVECs demonstrated that PDTC prevented NF-kappa B mobilization by TNF, suggesting that only VCAM-1 induction was controlled by NF-kappa B. 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 10 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1605 # text = Since HUVECs released superoxide anions in response to TNF, and H2O2 induces VCAM-1, PDTC may act as a radical scavenger. 1 Since since SCONJ IN _ _ _ _ _ 2 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 3 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 5 anions anion NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 13 induces induce NOUN NNS Number=Plur _ _ _ _ 14 VCAM VCAm NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 act act VERB VB VerbForm=Inf _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 radical radical ADJ JJ Degree=Pos _ _ _ _ 24 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1606 # text = Although ICAM-1 induction was unaffected, inhibitors of NADPH oxidase (apocynin) or cytochrome P-450 (SKF525a) suppressed VCAM-1 induction by TNF, revealing that several radical-generating systems are involved in its regulation. 1 Although although SCONJ IN _ _ _ _ _ 2 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NADPH NADPH DET DT _ _ _ _ _ 12 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 apocynin apocynin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 cytochrome cytochrome NOUN NN Number=Sing _ _ _ _ 18 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 450 450 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 SKF SKF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 525 525 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 several several ADJ JJ Degree=Pos _ _ _ _ 36 radical radical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 generating generating NOUN NN Number=Sing _ _ _ _ 39 systems system NOUN NNS Number=Plur _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 involved involved ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 44 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1607 # text = PDTC, apocynin, or SKF525a decreased adhesion of monocytic U937 cells to TNF-treated HUVECs (by 75% at 100 mumol/L PDTC). 1 PDTC Pdtc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apocynin apocynin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 SKF SKF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 52 52 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 by by ADP IN _ _ _ _ _ 23 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 100 100 NUM CD NumType=Card _ _ _ _ 27 mumol mumol NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 /L /L PROPN NNP Number=Sing _ _ _ _ 29 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1608 # text = Inhibition by anti-VCAM-1 monoclonal antibody 1G11 indicated that U937 adhesion was VCAM-1 dependent and suppression by antioxidants was due to reduced VCAM-1 induction. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 anti-VCAM anti-vcam NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 7 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 8 1G11 1G11 PROPN NNP Number=Sing _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 VCAM Vcam NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 dependent dependent NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 suppression suppression NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1609 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1610 # text = Document 00300160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300160 00300160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1611 # text = Reduction of tumour necrosis factor alpha expression and signalling in peripheral blood mononuclear cells from patients with thalassaemia or sickle cell anaemia upon treatment with desferrioxamine. 1 Reduction reduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumour tumour NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 sickle sickle NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 anaemia anaemia NOUN NN Number=Sing _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 desferrioxamine desferrioxamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1612 # text = Recent evidence indicates that the rate of progression of the HIV-1 disease is significantly reduced in thalassaemia major patients upon treatment with high doses of desferrioxamine (DFX). 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 progression progression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ _ 26 doses dos NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 desferrioxamine desferrioxamine NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 DFX DFX NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1613 # text = The authors have previously demonstrated that in vitro exposure of mononuclear cells to DFX decreases the bioavailability of tumour necrosis factor alpha (TNF-alpha) which has a stimulatory effect on HIV-1 replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 authors author NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 9 exposure exposure NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 DFX DFX PROPN NNP Number=Sing _ _ _ _ 15 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumour tumour NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1614 # text = In this study, therefore, TNF-alpha bioavailability from mononuclear cells isolated from 10 patients with thalassaemia or sickle cell anaemia given DFX as compared to 10 untreated subjects has been evaluated. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 patients patient NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 anaemia anaemia ADP IN _ _ _ _ _ 24 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 DFX Dfx NOUN NN Number=Sing _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 10 10 NUM CD NumType=Card _ _ _ _ 30 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 31 subjects subject NOUN NNS Number=Plur _ _ _ _ 32 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1615 # text = Evidence is presented showing that DFX treatment reduces TNF-alpha bioavailability (P<0.05) by inhibiting its steady state (P<0.05) and by enhancing its inactivation through binding to soluble TNF-alpha receptor type II (P<0.05). 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 showing show VERB VBG VerbForm=Ger _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 DFX DFX PROPN NNP Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 steady steady ADJ JJ Degree=Pos _ _ _ _ 22 state state NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 33 through through SCONJ IN _ _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 soluble soluble VERB VB VerbForm=Inf _ _ _ _ 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 receptor receptor NOUN NN Number=Sing _ _ _ _ 41 type type NOUN NN Number=Sing _ _ _ _ 42 II ii NUM CD NumType=Card _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1616 # text = We also show that DFX treatment limits the in vivo activation of NF-kappaB, a transcription factor involved in both TNF-alpha gene transcription and TNF-alpha signalling (P<0.005). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DFX DFX PROPN NNP Number=Sing _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 limits limit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 signalling signalling NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 0.005 0.005 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1617 # text = We conclude that TNF-alpha bioavailability and signalling are impaired in patients upon DFX treatment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 signalling signalling NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 DFX Dfx ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1618 # text = This mechanism may contribute to delayed progression of the HIV-1 infection in vivo. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 delayed delayed VERB VB VerbForm=Inf _ _ _ _ 7 progression progression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 1619 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1620 # text = Document 00300161 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300161 00300161 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1621 # text = Heterodimerization and transcriptional activation in vitro by NF-kappa B proteins. 1 Heterodimerization Heterodimerization NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro PROPN NNP Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1622 # text = The NF-kappa B family of transcription proteins represents multiple DNA binding, rel related polypeptides that contribute to regulation of genes involved in immune responsiveness and inflammation, as well as activation of the HIV long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 rel rel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 related related ADJ JJ Degree=Pos _ _ _ _ 17 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 immune immune ADJ JJ Degree=Pos _ _ _ _ 27 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 as as ADV RB _ _ _ _ _ 32 well well ADV RB Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV HIV PROPN NNP Number=Sing _ _ _ _ 38 long long ADJ JJ Degree=Pos _ _ _ _ 39 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 40 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1623 # text = In this study multiple NF-kappa B related polypeptides ranging from 85 to 45 kDa were examined for their capacity to interact with the PRDII regulatory element of interferon beta and were shown to possess distinct intrinsic DNA binding affinities for this NF-kappa B site and form multiple DNA binding homo- and heterodimer complexes in co-renaturation experiments. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 related relate ADJ JJ Degree=Pos _ _ _ _ 10 polypeptides polypeptides NOUN NNS Number=Plur _ _ _ _ 11 ranging range VERB VBG VerbForm=Ger _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 85 85 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 45 45 NUM CD NumType=Card _ _ _ _ 16 kDa kDa PROPN NNP Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 capacity capacity NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 interact interact VERB VB VerbForm=Inf _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PRDII pRDIi X AFX _ _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 interferon interferon NOUN NN Number=Sing _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 possess possess VERB VB VerbForm=Inf _ _ _ _ 37 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 38 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 affinities affinity NOUN NNS Number=Plur _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 site site NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 form form ADJ JJ Degree=Pos _ _ _ _ 51 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 52 DNA dna NOUN NN Number=Sing _ _ _ _ 53 binding binding VERB VBG VerbForm=Ger _ _ _ _ 54 homo homo ADV RB _ _ _ _ SpaceAfter=No 55 - - PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 58 complexes complex NOUN NNS Number=Plur _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 co-renaturation co-renaturation NOUN NN Number=Sing _ _ _ _ 61 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 1624 # text = Furthermore, using DNA templates containing two copies of the PRDII domain linked to the rabbit beta globin gene, the purified polypeptides specifically stimulated NF-kappa B dependent transcription in an in vitro reconstitution assay as heterodimers but not as p50 homodimers. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 templates template NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 copies copy NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 PRDII PRDII PROPN NNP Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 globin globin ADP IN _ _ _ _ _ 19 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 24 specifically specifically ADV RB _ _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 36 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 not not ADV RB _ _ _ _ _ 42 as as ADV RB _ _ _ _ _ 43 p50 p50 NUM CD NumType=Card _ _ _ _ 44 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1625 # text = These experiments emphasize the role of NF-kappa B dimerization as a distinct level of transcriptional control that may permit functional diversification of a limited number of regulatory proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 permit permit VERB VB VerbForm=Inf _ _ _ _ 22 functional functional ADJ JJ Degree=Pos _ _ _ _ 23 diversification diversification NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 limited limited ADJ JJ Degree=Pos _ _ _ _ 27 number number NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1626 # text = Document 00300162 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300162 00300162 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1627 # text = A nuclear factor NF-GM2 that interacts with a regulatory region of the GM-CSF gene essential for its induction in responses to T-cell activation: purification from human T-cell leukemia line Jurkat cells and similarity to NF-kappa B. Activation of T cells by antigen, lectin, or a combination of phorbol-12-myristate acetate (PMA) and calcium ionophore (A23187) leads to the induction of genes for a set of lymphokines, including granulocyte-macrophage colony-stimulating factor (GM-CSF). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 responses response NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 purification purification NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 similarity similarity NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 46 Activation Activation PROPN NNP Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 or or CCONJ CC _ _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 combination combination NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 myristate myristate NOUN NN Number=Sing _ _ _ _ 64 acetate acetate NOUN NN Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ _ 68 and and CCONJ CC _ _ _ _ _ 69 calcium calcium NOUN NN Number=Sing _ _ _ _ 70 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 71 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 72 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 73 ) ) PUNCT -RRB- _ _ _ _ _ 74 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 75 to to ADP IN _ _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 induction induction NOUN NN Number=Sing _ _ _ _ 78 of of ADP IN _ _ _ _ _ 79 genes gene NOUN NNS Number=Plur _ _ _ _ 80 for for ADP IN _ _ _ _ _ 81 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 82 set set NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 lymphokines lymphokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 including include VERB VBG VerbForm=Ger _ _ _ _ 87 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 89 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 90 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 93 factor factor NOUN NN Number=Sing _ _ _ _ 94 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 95 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 96 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 97 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 98 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 99 . . PUNCT . _ _ _ _ _ # sent_id = 1628 # text = We demonstrated in earlier studies that the upstream region of the mouse GM-CSF promoter at positions between -95 and -73 is essential for transcriptional activation in response to PMA/A23187. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CSF CSF PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 positions position NOUN NNS Number=Plur _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 -95 -95 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 73 73 NUM CD NumType=Card _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 essential essential ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 PMA/A PMA/A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 23187 23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1629 # text = This region contains two DNA-binding motifs, GM2 and GC-box. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 GM2 GM2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GC Gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1630 # text = The GM2 sequence (GGTAGTTCCC) is recognized by an inducible factor NF-GM2; the other (CCGCCC) by constitutive factors A1, A2, and B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM2 Gm2 NUM CD NumType=Card _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GGTAGTTCCC GGTAGTTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 GM2 Gm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 CCGCCC CCGCCC X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 A1 A1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 A2 A2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1631 # text = To elucidate the mechanism of GM-CSF gene activation, we have purified the inducible factor NF-GM2 from the nuclear extract of stimulated Jurkat cells on the basis of specific DNA-binding activity. 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extract extract NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 basis basis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1632 # text = The purified NF-GM2 consists of 50 (p50) and 65 kDa (p65) polypeptides and has a binding activity specific for both the GM-CSF and immunoglobulin kappa (GGAAAGTCCC) enhancers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 65 65 NUM CD NumType=Card _ _ _ _ 14 kDa kDa NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 both both CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 GM gm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF Csf PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 immunoglobulin immunoglobulin PROPN NNP Number=Sing _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 GGAAAGTCCC Ggaaagtccc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1633 # text = Electrophoretically purified p50 alone can form a protein-DNA complex, but in the mixture, p50 associates preferentially with p65 to form the NF-GM2 complex. 1 Electrophoretically Electrophoretically ADV RB _ _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 p50 p50 NOUN NN Number=Sing _ _ _ _ 4 alone alone ADV RB _ _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 form form VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mixture mixture NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 associates associate NOUN NNS Number=Plur _ _ _ _ 20 preferentially preferentially ADV RB _ _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 form form VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1634 # text = In addition, p65 gave per se, with low affinity, a protein-DNA complex that migrated more slowly than native NF-GM2 complex. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ _ 5 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 per per ADP IN _ _ _ _ _ 7 se se NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 low low ADJ JJ Degree=Pos _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 migrated migrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 slowly slowly ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 native native ADJ JJ Degree=Pos _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 GM2 Gm2 NUM CD NumType=Card _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1635 # text = Furthermore, an antiserum against KBF1 (identical to 50 kDa NF-kappa B protein) reacted with the p50 of NF-GM2, indicating that the NF-GM2 polypeptide cannot be immunologically differentiated from the 50 kDa subunit of NF-kappa B. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 5 against against ADP IN _ _ _ _ _ 6 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 identical identical ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 50 50 NUM CD NumType=Card _ _ _ _ 11 kDa kDa PROPN NNP Number=Sing _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b X GW _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 reacted react VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 p50 p50 NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 GM2 Gm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 33 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 35 not not PART RB _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 immunologically immunologically ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 50 50 NUM CD NumType=Card _ _ _ _ 42 kDa kDa NOUN NN Number=Sing _ _ _ _ 43 subunit subunit NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappa kappa PROPN NNP Number=Sing _ _ _ _ 48 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1636 # text = The purified NF-GM2 activated in vitro transcription from the kappa B enhancer, while it failed to stimulate transcription from the GM-CSF promoter harboring the GM2 sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 harboring harbor VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1637 # text = This suggests that the activation mechanism of the GM-CSF gene through the GM2/GC-box sequence is different from that of genes carrying the kappa B enhancer alone. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 gene gene VERB VB VerbForm=Inf _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM2/GC Gm2/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 alone alone ADV RB _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1638 # text = Document 00300163 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300163 00300163 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1639 # text = Retinoic acid-induced modulation of IL-2 mRNA production and IL-2 receptor expression on T cells. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -induced -induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 modulation modulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1640 # text = BACKGROUND: Retinoic acid (RA) has important immune-modulating effects on both T and B cell function. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 4 acid acid NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 -modulating -modulating NOUN NN Number=Sing _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1641 # text = Our laboratory has shown that RA can enhance in vitro polyclonal B cell immunoglobulin 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 RA RA PROPN NNP Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 11 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 1642 # text = (Ig) response. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 1643 # text = Investigating cytokines known to affect B cell differentiation, we have recently shown that IL-6 production is augmented by RA. 1 Investigating investigate VERB VBG VerbForm=Ger _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 affect affect NOUN NN Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 cell cell PROPN NNP Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1644 # text = In the present study we have examined the immune modulating effects of RA on IL-2 mRNA, another important cytokine for B cell immunoglobulin production, the expression of IL-2 receptors on T cells, and the RA nuclear receptors. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 modulating modulating NOUN NN Number=Sing _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RA RA PROPN NNP Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 another another DET DT _ _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 RA RA PROPN NNP Number=Sing _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1645 # text = METHODS: Purified T cells were obtained from adenoidal tissues, and incubated with RA (10(-7) M) or DMSO solvent/media control for 0, 6-8, and 24 h. 1 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 adenoidal adenoidal ADJ JJ Degree=Pos _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 RA RA PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 DMSO Dmso PROPN NNP Number=Sing _ _ _ _ 25 solvent solvent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 27 media media NOUN NN Number=Sing _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 24 24 NUM CD NumType=Card _ _ _ _ 38 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1646 # text = Total mRNA was extracted from T cells, and using RT-PCR, changes in the production of IL-2 and RA receptors (RAR)-alpha,beta,gamma mRNA were determined. 1 Total total PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 using use VERB VBG VerbForm=Ger _ _ _ _ 11 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 PCR Pcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 changes change NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 RA Ra NOUN NN Number=Sing _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ SpaceAfter=No 34 gamma gamma PROPN NNP Number=Sing _ _ _ _ 35 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 determined determine ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1647 # text = The effects of RA on IL-2-alpha receptor expression was determined by flow cytometry on T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 flow flow NOUN NN Number=Sing _ _ _ _ 17 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1648 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 1649 # text = These studies suggest that RA can augment IL-2 mRNA production by T cells with a possible paracrine effect on IL-2R-alpha expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 augment augment VERB VB VerbForm=Inf _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 possible possible ADJ JJ Degree=Pos _ _ _ _ 19 paracrine paracrine NOUN NN Number=Sing _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 IL- IL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 2R 2r NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1650 # text = These changes appear to be mediated by RAR-alpha. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 changes change NOUN NNS Number=Plur _ _ _ _ 3 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 RAR- rar- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1651 # text = Thus, IL-2 may be another important cytokine modulated by RA in the immune response. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 another another DET DT _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 RA RA PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1652 # text = Document 00300164 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300164 00300164 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1653 # text = IL-1 receptor and TCR signals synergize to activate NF-kappa B-mediated gene transcription. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TCR Tcr NOUN NN Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B- B- PUNCT : _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1654 # text = Previous studies have demonstrated that IL-1 receptor (IL-1R)- and TCR-initiated signals can interact synergistically to increase the rate of transcription of several lymphokine and lymphokine receptor genes during the competence phase of the activation program in T helper lymphocytes. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1R -1r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 interact interact VERB VB VerbForm=Inf _ _ _ _ 22 synergistically synergistically ADV RB _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 increase increase VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 rate rate NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 several several ADJ JJ Degree=Pos _ _ _ _ 31 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 competence competence NOUN NN Number=Sing _ _ _ _ 39 phase phase NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 program program NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 helper helper NOUN NN Number=Sing _ _ _ _ 47 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1655 # text = In this report we describe how signals initiated through the type I IL-1R interact with signals from the antigen receptor to synergistically augment the transactivating properties of NF-kappa B. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 how how ADV WRB PronType=Int _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1R 1r PROPN NNP Number=Sing _ _ _ _ 16 interact interact NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 synergistically synergistically ADV RB _ _ _ _ _ 25 augment augment VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 28 properties property NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1656 # text = The synergistic antigen receptor initiated signals are mediated through protein kinase C because they can be mimicked by the phorbol ester, 12-O-tetradecanoylphorbol-13-acetate, but not with calcium ionophores; and are staurosporine sensitive but cyclosporine resistant. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 3 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 signals signal NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 C care NOUN NN Number=Sing _ _ _ _ 13 because because SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 O o INTJ UH _ _ _ _ SpaceAfter=No 26 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 27 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 -acetate -acetate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ _ 34 ionophores ionophore NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 staurosporine staurosporine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 cyclosporine cyclosporine ADJ JJ Degree=Pos _ _ _ _ 42 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1657 # text = Gel shift analyses demonstrate that NF-kappa B nuclear translocation is stimulated primarily by IL-1 rather than by antigen receptor signals. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 primarily primarily ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 rather rather ADV RB _ _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1658 # text = Western blot and phosphorylation analyses demonstrate that the synergistic effect on NF-kappa B functional activity is independent of I kappa B alpha (MAD3)-NF-kappa B dissociation in the cytosol and is not associated with I kappa B nuclear translocation. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B benefit PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MAD3 MAD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B benefit PROPN NNP Number=Sing _ _ _ _ 45 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 46 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1659 # text = The IL-1-induced NF-kappa B DNA nuclear localization is transient and can be prolonged either by an antigen receptor-initiated signal or by inhibiting protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 DNA dna PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 localization localization NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 either either CCONJ CC _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -initiated -initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 by by SCONJ IN _ _ _ _ _ 29 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1660 # text = These results suggest that IL-1 induces both NF-kappa B nuclear translocation and the synthesis of a protein(s) responsible for terminating NF-kappa B-DNA interaction in the nucleus. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 translocation translocation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 s s X AFX _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 terminating terminating VERB VBG VerbForm=Ger _ _ _ _ 28 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1661 # text = Antigen receptor signals prolong NF-kappa B-DNA interaction, probably by functionally antagonizing the IL-1-induced synthesis of a protein(s) responsible for the transient NF-kappa B-DNA interaction and consequently synergistically enhance IL-1-induced NF-kappa B-dependent gene transcription. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 prolong prolong VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 probably probably ADV RB _ _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 functionally functionally ADV RB _ _ _ _ _ 16 antagonizing antagonize VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 s s X AFX _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transient transient ADJ JJ Degree=Pos _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 interaction interaction NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 consequently consequently ADV RB _ _ _ _ _ 43 synergistically synergistically ADV RB _ _ _ _ _ 44 enhance enhance NOUN NN Number=Sing _ _ _ _ 45 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa PROPN NNP Number=Sing _ _ _ _ 53 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 gene gene NOUN NN Number=Sing _ _ _ _ 57 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1662 # text = Document 00300165 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300165 00300165 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1663 # text = Inhibition of NF-AT-dependent transcription by NF-kappa B: implications for differential gene expression in T helper cell subsets. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 AT at ADP IN _ _ _ _ SpaceAfter=No 6 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 implications implication NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 differential differential ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 helper helper ADJ JJR Degree=Cmp _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1664 # text = Activation of individual CD4+ T cells results in differential lymphokine expression: interleukin 2 (IL-2) is preferentially produced by T helper type 1 (TH1) cells, which are involved in cell-mediated immune responses, whereas IL-4 is synthesized by TH2 cells, which are essential for humoral immunity. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 individual individual ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 differential differential ADJ JJ Degree=Pos _ _ _ _ 11 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 preferentially preferentially ADV RB _ _ _ _ _ 23 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 helper helper NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TH1 TH1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 involved involved ADJ JJ Degree=Pos _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 immune immune NOUN NN Number=Sing _ _ _ _ 42 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 whereas whereas SCONJ IN _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 4 4 NUM CD NumType=Card _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 TH2 TH2 NUM CD NumType=Card _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 which which PRON WDT PronType=Rel _ _ _ _ 55 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 essential essential ADJ JJ Degree=Pos _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 humoral humoral ADJ JJ Degree=Pos _ _ _ _ 59 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 1665 # text = The Ca(2+)-dependent factor NF-ATp plays a key role in the inducible transcription of both these lymphokine genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 +) +) SYM NFP _ _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 ATp ATp PROPN NNP Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 key key ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1666 # text = However, while IL2 expression requires the contribution of Ca(2+)- and protein kinase C-dependent signals, we report that activation of human IL4 transcription through the Ca(2+)-dependent pathway is diminished by protein kinase C stimulation in Jurkat T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 IL2 IL2 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 contribution contribution NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 +) +) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C- C- SYM SYM _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 IL4 IL4 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 through through ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 +) +) SYM NFP _ _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 pathway pathway NOUN NN Number=Sing _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 kinase kinase NOUN NN Number=Sing _ _ _ _ 44 C c NOUN NN Number=Sing _ _ _ _ 45 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1667 # text = This phenomenon is due to mutually exclusive binding of NF-ATp and NF-kappa B to the P sequence, an element located 69 bp upstream of the IL4 transcription initiation site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 due due ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 mutually mutually ADV RB _ _ _ _ _ 7 exclusive exclusive VERB VB VerbForm=Inf _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 ATp ATp PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 P P NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 69 69 NUM CD NumType=Card _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL4 IL4 PROPN NNP Number=Sing _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 initiation initiation NOUN NN Number=Sing _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1668 # text = Human IL4 promoter-mediated transcription is downregulated in Jurkat cells stimulated with the NF-kappa B-activating cytokine tumor necrosis factor alpha and suppressed in RelA-overexpressing cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 IL4 IL4 NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 activating activate VERB VBG VerbForm=Ger _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 overexpressing overexpresse ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1669 # text = In contrast, protein kinase C stimulation or RelA overexpression does not affect the activity of a human IL4 promoter containing a mouse P sequence, which is a higher-affinity site for NF-ATp and a lower-affinity site for RelA. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C C NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 RelA Rela NOUN NN Number=Sing _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 IL4 Il4 NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 P p NOUN NN Number=Sing _ _ _ _ 25 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 higher higher ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 affinity affinity NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 ATp ATp PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 lower lower ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 affinity affinity NOUN NN Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1670 # text = Thus, competition between two general transcriptional activators, RelA and NF-ATp, mediates the inhibitory effect of protein kinase C stimulation on IL4 expression and may contribute to differential gene expression in TH cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 competition competition NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 general general ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 RelA RelA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 C c NOUN NN Number=Sing _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 IL4 IL4 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 differential differential VERB VB VerbForm=Inf _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 TH th ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1671 # text = Document 00300166 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300166 00300166 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1672 # text = Inhibition of NF-kappa B activation in vitro and in vivo: role of 26S proteasome. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 S S NOUN NN Number=Sing _ _ _ _ 18 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1673 # text = It is becoming increasingly apparent that NF-kappa B plays a critical role in regulating the inflammatory response. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 becoming become VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 increasingly increasingly ADV RB _ _ _ _ _ 5 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1674 # text = Data obtained from studies in our laboratories demonstrate that the proteasome plays an important role in the inflammatory cascade by regulating the activation of NF-kappa B. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 7 laboratories laboratory NOUN NNS Number=Plur _ _ _ _ 8 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 cascade cascade NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1675 # text = Indeed, the availability of selective and orally active proteasome inhibitors should prove useful in delineating the roles of the proteasome and NF-kappa B in other pathophysiological conditions such as cancer and heart disease. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 availability availability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 selective selective ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 orally orally ADV RB _ _ _ _ _ 9 active active ADJ JJ Degree=Pos _ _ _ _ 10 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 should should AUX MD VerbForm=Fin _ _ _ _ 13 prove prove VERB VB VerbForm=Inf _ _ _ _ 14 useful useful ADJ JJ Degree=Pos _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 delineating delineat VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 roles role NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 30 conditions condition NOUN NNS Number=Plur _ _ _ _ 31 such such ADJ JJ Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 cancer cancer NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 heart heart NOUN NN Number=Sing _ _ _ _ 36 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1676 # text = Document 00300167 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300167 00300167 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1677 # text = HIV1 infection of human monocytes and macrophages promotes induction or translocation of NF-KB-related factors. 1 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 KB KB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1678 # text = In 1991, we demonstrated, using electrophoretic mobility shift assays, that 3 different factors (termed B1, B2 and B3) with affinity for the KB-enhancer target sequence were specifically detected in nuclear extracts from HIV1-infected monocytes and macrophages. 1 In in ADP IN _ _ _ _ _ 2 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 9 mobility mobility NOUN NN Number=Sing _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 B1 b1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 B2 b2 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 B3 B3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 affinity affinity NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 KB KB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 target target NOUN NN Number=Sing _ _ _ _ 33 sequence sequence NOUN NN Number=Sing _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 specifically specifically ADV RB _ _ _ _ _ 36 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1679 # text = The B2 factor was induced in the nuclei of these cells only upon HIV1 infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B2 b2 NUM CD NumType=Card _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1680 # text = The B3 factor was only slightly evident in nuclei of uninfected cells but was readily detectable in nuclei of infected monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B3 B3 NUM CD NumType=Card _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 slightly slightly ADV RB _ _ _ _ _ 7 evident evident ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 readily readily ADV RB _ _ _ _ _ 16 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 infected infect ADJ JJ Degree=Pos _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1681 # text = Its expression remained very low in nuclei of HIV1-infected macrophages. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 very very ADV RB _ _ _ _ _ 5 low low ADV RB Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1682 # text = In this paper, we demonstrate that the B2 factor is expressed in the cytosol of monocytes and macrophages as a DNA-binding protein, indicating that it is not associated with an inhibitor (IKB). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 B2 b2 NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IKB IKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1683 # text = This factor remained clustered in the cytosol and was translocated to the nuclei only after HIV1 infection. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 clustered cluster VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 translocated translocate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1684 # text = The B3 factor is detected in the cytosol only when cells are HIV1-infected. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B3 B3 NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1685 # text = The role of HIV1 infection in the expression and the translocation of these factors is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1686 # text = Document 00300168 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300168 00300168 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1687 # text = The intracellular parasite Theileria parva protects infected T cells from apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 parasite parasite NOUN NN Number=Sing _ _ _ _ 4 Theileria Theileria NOUN NN Number=Sing _ _ _ _ 5 parva parva NOUN NN Number=Sing _ _ _ _ 6 protects protect NOUN NNS Number=Plur _ _ _ _ 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1688 # text = Parasites have evolved a plethora of strategies to ensure their survival. 1 Parasites Parasite NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 plethora plethora NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 strategies strategy NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 ensure ensure VERB VB VerbForm=Inf _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1689 # text = The intracellular parasite Theileria parva secures its propagation and spreads through the infected animal by infecting and transforming T cells, inducing their continuous proliferation and rendering them metastatic. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 parasite parasite NOUN NN Number=Sing _ _ _ _ 4 Theileria Theileria NOUN NN Number=Sing _ _ _ _ 5 parva parva NOUN NN Number=Sing _ _ _ _ 6 secures secure VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 propagation propagation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 spreads spread NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 animal animal NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 infecting infecte VERB VBG VerbForm=Ger _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 rendering render VERB VBG VerbForm=Ger _ _ _ _ 28 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 metastatic metastatic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1690 # text = In previous work, we have shown that the parasite induces constitutive activation of the transcription factor NF-kappaB, by inducing the constitutive degradation of its cytoplasmic inhibitors. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 parasite parasite NOUN NN Number=Sing _ _ _ _ 11 induces induces VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 30 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1691 # text = The biological significance of NF-kappaB activation in T. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 biological biological ADJ JJ Degree=Pos _ _ _ _ 3 significance significance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T. T. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1692 # text = parva-infected cells, however, has not yet been defined. 1 parva-infected parva-infected ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 yet yet ADV RB _ _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1693 # text = Cells that have been transformed by viruses or oncogenes can persist only if they manage to avoid destruction by the apoptotic mechanisms that are activated on transformation and that contribute to maintain cellular homeostasis. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 viruses virus NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 persist persist VERB VB VerbForm=Inf _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 if if SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 manage manage VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 avoid avoid VERB VB VerbForm=Inf _ _ _ _ 18 destruction destruction NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 contribute contribute NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 33 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 34 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1694 # text = We now demonstrate that parasite-induced NF-kappaB activation plays a crucial role in the survival of T. parva-transformed 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 survival survival NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T. T. PROPN NNP Number=Sing _ _ _ _ 21 parva parva NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 1695 # text = T cells by conveying protection against an apoptotic signal that accompanies parasite-mediated transformation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 conveying convey VERB VBG VerbForm=Ger _ _ _ _ 5 protection protection NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 accompanies accompany VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1696 # text = Consequently, inhibition of NF-kappaB nuclear translocation and the expression of dominant negative mutant forms of components of the NF-kappaB activation pathway, such as IkappaBalpha or p65, prompt rapid apoptosis of T. parva-transformed 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 15 negative negative ADJ JJ Degree=Pos _ _ _ _ 16 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 17 forms form NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 components component NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 such such ADJ JJ Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 prompt prompt ADJ JJ Degree=Pos _ _ _ _ 35 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 36 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 T. T. PROPN NNP Number=Sing _ _ _ _ 39 parva parva NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 1697 # text = T cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 1698 # text = Our findings offer important insights into parasite survival strategies and demonstrate that parasite-induced constitutive NF-kappaB activation is an essential step in maintaining the transformed phenotype of the infected cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 insights insight NOUN NNS Number=Plur _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 parasite parasite NOUN NN Number=Sing _ _ _ _ 8 survival survival NOUN NN Number=Sing _ _ _ _ 9 strategies strategy NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 essential essential ADJ JJ Degree=Pos _ _ _ _ 24 step step NOUN NN Number=Sing _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 infected infect ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1699 # text = Document 00300169 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300169 00300169 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1700 # text = Posttranscriptional regulation of macrophage tissue factor expression by antioxidants. 1 Posttranscriptional Posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1701 # text = Tissue factor (TF) expression by cells of monocyte/macrophage lineage represents an important mechanism underlying the initiation of fibrin deposition at sites of extravascular inflammation. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 13 lineage lineage NOUN NN Number=Sing _ _ _ _ 14 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 initiation initiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 fibrin fibrin NOUN NN Number=Sing _ _ _ _ 23 deposition deposition NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 extravascular extravascular ADJ JJ Degree=Pos _ _ _ _ 28 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1702 # text = Recent evidence suggests a role for oxidant stress in the signalling pathway of various cell types by virtue of its ability to induce DNA binding of various transcription factors, including nuclear factor kappa B and AP-1. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 signalling signall NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 virtue virtue NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 various various ADJ JJ Degree=Pos _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1703 # text = The effect of antioxidant treatment on lipopolysaccharide (LPS)-induced TF expression was examined in murine peritoneal macrophages and human monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 TF Tf NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 murine murine PRON PRP _ _ _ _ _ 19 peritoneal peritoneal ADJ JJ Degree=Pos _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1704 # text = Both pyrrolidine dithiocarbamate, an oxidant scavenger, and N-acetyl-cysteine, a precursor of the endogenous antioxidant glutathione, inhibited stimulation of macrophage procoagulant activity by LPS. 1 Both both DET DT _ _ _ _ _ 2 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 3 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 7 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 N- N- SYM NFP _ _ _ _ SpaceAfter=No 11 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 precursor precursor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 20 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 21 glutathione glutathione NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 27 procoagulant procoagulant NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1705 # text = Northern blot analysis showed that neither of these agents reduced LPS-stimulated TF mRNA accumulation, thereby suggesting a posttranscriptional mechanism for the effect. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 neither neither DET DT _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 agents agent NOUN NNS Number=Plur _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TF TF PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 thereby thereby ADV RB _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1706 # text = Immunofluorescence studies of human monocytes using polyclonal anti-TF antibody showed that N-acetyl-cysteine treatment prevented the characteristic plasmalemmal localization of TF antigen that occurs in response to LPS. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -TF -tf PROPN NNP Number=Sing _ _ _ _ 10 antibody antibody PRON NN Number=Sing _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 21 plasmalemmal plasmalemmal NOUN NN Number=Sing _ _ _ _ 22 localization localization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TF TF PROPN NNP Number=Sing _ _ _ _ 25 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 occurs occur NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1707 # text = Western blot analysis showed that N-acetyl-cysteine reduced the accumulation of the 47-kD mature glycoprotein in LPS-treated cells, a finding consistent with the results of the immunofluorescence studies. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 10 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kD kd NOUN NN Number=Sing _ _ _ _ 18 mature mature NOUN NN Number=Sing _ _ _ _ 19 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 finding finding NOUN NN Number=Sing _ _ _ _ 28 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 results result NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 35 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1708 # text = Furthermore, these conditions did not result in an accumulation of the less mature forms of TF. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 conditions condition NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 result result VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 less less ADV RBS _ _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 forms form NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1709 # text = When considered together, these data suggest that antioxidants exert their effects by impairing translation and/or by causing degradation of newly translated protein. 1 When when ADV WRB PronType=Int _ _ _ _ 2 considered consider VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 together together ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 data data NOUN NN Number=Sing _ _ _ _ 7 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 10 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 impairing impair VERB VBG VerbForm=Ger _ _ _ _ 15 translation translation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 or or CCONJ CC _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 causing cause VERB VBG VerbForm=Ger _ _ _ _ 21 degradation degradation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 newly newly ADV RB _ _ _ _ _ 24 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1710 # text = The effect of antioxidants on tumor necrosis factor appeared to be species specific, with no effect on LPS-induced tumor necrosis factor in murine cells, but with inhibition in human monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 species species NOUN NNS Number=Plur _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 murine murine ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1711 # text = The posttranscriptional effect of antioxidants on TF expression data suggests a novel mechanism whereby these agents might modulate monocyte/macrophage activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 TF Tf NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 data data NOUN NN Number=Sing _ _ _ _ 10 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 novel novel NOUN NN Number=Sing _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 whereby whereby SCONJ IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 agents agent NOUN NNS Number=Plur _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 19 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1712 # text = Document 00300170 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300170 00300170 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1713 # text = Natural variants of the HIV-1 long terminal repeat: analysis of promoters with duplicated DNA regulatory motifs. 1 Natural Natural ADJ JJ Degree=Pos _ _ _ _ 2 variants variant NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 long long ADJ JJ Degree=Pos _ _ _ _ 9 terminal terminal NOUN NN Number=Sing _ _ _ _ 10 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 promoters promoter NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 duplicated duplicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1714 # text = Sequence variation in the long terminal repeat (LTR) region of HIV-1 was analyzed in viral isolates of 17 infected individuals. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 long long ADJ JJ Degree=Pos _ _ _ _ 6 terminal terminal NOUN NN Number=Sing _ _ _ _ 7 repeat repeat NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 isolates isolate NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 17 17 NUM CD NumType=Card _ _ _ _ 23 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1715 # text = Two classes of LTR size variants were found. 1 Two two NUM CD NumType=Card _ _ _ _ 2 classes class NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 5 size size NOUN NN Number=Sing _ _ _ _ 6 variants variant NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 1716 # text = One HIV-1 variant was detected containing an additional binding site for the transcription factor Sp1. Another LTR size variation was observed in four patients in a region just upstream of the NF-kappa B enhancer. 1 One one NUM CD NumType=Card _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 variant variant NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 additional additional ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ 19 Another another DET DT _ _ _ _ _ 20 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 21 size size NOUN NN Number=Sing _ _ _ _ 22 variation variation NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 four four NUM CD NumType=Card _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 region region NOUN NN Number=Sing _ _ _ _ 31 just just ADV RB _ _ _ _ _ 32 upstream upstream NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1717 # text = This variation was the result of a duplication of a short DNA sequence (CTG-motif). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 result result NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 duplication duplication NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 short short ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CTG-motif CTG-motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1718 # text = Cell culture experiments demonstrated that the natural variant with four Sp1 sites had a slightly higher promoter activity and viral replication rate than the isogenic control LTR with three Sp1 sites. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 culture culture NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 natural natural ADJ JJ Degree=Pos _ _ _ _ 8 variant variant NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 four four NUM CD NumType=Card _ _ _ _ 11 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 slightly slightly ADV RB _ _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 rate rate NOUN NN Number=Sing _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 isogenic isogenic ADJ JJ Degree=Pos _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 LTR Ltr NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ _ 30 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 31 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1719 # text = No positive effect of the duplicated CTG-motif could be detected. 1 No no DET DT _ _ _ _ _ 2 positive positive ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 duplicated duplicate ADJ JJ Degree=Pos _ _ _ _ 7 CTG- Ctg- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 motif motif NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1720 # text = In order to measure small differences in virus production more accurately, equal amounts of a size variant and the wild-type plasmid were cotransfected into T-cells. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 measure measure VERB VB VerbForm=Inf _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 accurately accurately ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 equal equal ADJ JJ Degree=Pos _ _ _ _ 14 amounts amount NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 size size NOUN NN Number=Sing _ _ _ _ 18 variant variant NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1721 # text = The virus with four Sp1 sites did outgrow the three Sp1 virus in 35 days of culture and CTG-monomer virus outcompeted the CTG-dimer virus in 42 days. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 four four NUM CD NumType=Card _ _ _ _ 5 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 outgrow outgrow VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 35 35 NUM CD NumType=Card _ _ _ _ 15 days day NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CTG-monomer CTG-monomer NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 outcompeted outcompete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CTG- Ctg- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 dimer dimer NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 42 42 NUM CD NumType=Card _ _ _ _ 28 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1722 # text = Based on these results we estimate a 5-10% difference in virus production of the LTR variants when compared to that of wild-type. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 estimate estimate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 difference difference NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 LTR LTR PROPN NNP Number=Sing _ _ _ _ 19 variants variant NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1723 # text = Document 00300171 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300171 00300171 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1724 # text = Human immunodeficiency virus type 1 Nef protein down-regulates transcription factors NF-kappa B and AP-1 in human T cells in vitro after T-cell receptor stimulation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 Nef Nef NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 down down ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 regulates regulate VERB NNS Number=Plur _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1725 # text = Human immunodeficiency virus type 1 (HIV-1) negative factor (Nef) has been shown to down-regulate the transcription factors NF-kappa B and AP-1 in vitro. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 down down ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1726 # text = To define the mechanism of action of the Nef protein, the signal transduction pathways which may be affected in T cells by constitutive expression of the nef gene were examined. 1 To to PART TO _ _ _ _ _ 2 define define VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 action action NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Nef Nef PROPN NNP Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 signal signal ADJ JJ Degree=Pos _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nef nef NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1727 # text = Stimulation of T cells with tumor necrosis factor, interleukin-1, or lipopolysaccharide resulted in the recruitment of transcriptional factors to a similar level whether or not the cells expressed the nef gene. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 16 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ _ 27 whether whether SCONJ IN _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nef nef ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1728 # text = On the other hand, stimulation of T cells by mitogens or antibodies to the T-cell receptor (TCR)-CD3 complex resulted in the down-regulation of transcriptional factors NF-kappa B and AP-1 in cells expressing the nef gene compared with cells not expressing the nef gene. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 nef nef NOUN NN Number=Sing _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 not not ADV RB _ _ _ _ _ 52 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 nef nef NOUN NN Number=Sing _ _ _ _ 55 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 1729 # text = Because the Nef protein does not affect the surface expression of the CD3-TCR complex, we conclude that the Nef protein down-regulates the transcriptional factors NF-kappa B and AP-1 in T cells in vitro through an effect on the TCR-dependent signal transduction pathway. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Nef Nef PROPN NNP Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 affect affect VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 TCR Tcr NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Nef Nef PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 down down ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 vitro vitro NOUN NN Number=Sing _ _ _ _ 43 through through ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ _ 46 on on ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 51 signal signal NOUN NN Number=Sing _ _ _ _ 52 transduction transduction NOUN NN Number=Sing _ _ _ _ 53 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1730 # text = Document 00300172 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300172 00300172 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1731 # text = Induction of relA(p65) and I kappa B alpha subunit expression during differentiation of human peripheral blood monocytes to macrophages. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 relA relA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 p65 p65 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B b X LS _ _ _ _ _ 11 alpha alpha X FW Foreign=Yes _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1732 # text = We evaluated the expression and DNA binding activity of nuclear factor (NF)-kappa B subunits in human peripheral blood monocytes and in monocyte-derived macrophages (MDMs). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 subunits subunit NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 MDMs Mdms NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1733 # text = Constitutive DNA binding activity consisting of p50 homodimers was detected in nuclear extracts from both cell types. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binde VERB VBG VerbForm=Ger _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 consisting consisting NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1734 # text = An additional complex composed of p50/RelA(p65) heterodimers appeared only in nuclear extracts from 7-day MDMs. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 12 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 day day NOUN NN Number=Sing _ _ _ _ 21 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1735 # text = Immunoblot analysis showed that the p50 subunit was constitutively expressed in monocytes and MDMs. 1 Immunoblot Immunoblot PROPN NNP Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 constitutively constitutively ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1736 # text = In contrast, the RelA(p65) subunit was barely detectable in monocytes, but its level increased markedly in MDMs. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 barely barely ADV RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 markedly markedly ADV RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1737 # text = Analysis of RelA(p65) mRNA revealed that the stability of RelA(p65) mRNA was significantly higher in MDMs, compared with monocytes. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 p65 p65 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 stability stability NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 higher higher ADJ JJR Degree=Cmp _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1738 # text = In MDMs, an upregulation of I kappa 1 In in ADP IN _ _ _ _ _ 2 MDMs Mdms PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 1739 # text = B alpha synthesis as well as the appearance of a novel M(r) 40,000 form of I kappa B alpha were also observed. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 40,000 40,000 NUM CD NumType=Card _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B B PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1740 # text = These results suggest that macrophage differentiation results in the expression of active p50/RelA(p65) heterodimers with the capacity to activate target gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 active active ADJ JJ Degree=Pos _ _ _ _ 13 p50/ p50/ PUNCT HYPH _ _ _ _ SpaceAfter=No 14 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 capacity capacity NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1741 # text = The parallel induction of I kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 1742 # text = B alpha synthesis may allow for the continuous presence of a cytoplasmic reservoir of p50/RelA(p65) complexes that are readily available for inducer-mediated stimulation. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 allow allow VERB VB VerbForm=Inf _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 13 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 p50/ p50/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 RelA Rela PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 complexes complexe NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 readily readily ADV RB _ _ _ _ _ 24 available available ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 inducer inducer ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1743 # text = Document 00300173 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300173 00300173 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1744 # text = Phosphatidylinositides bind to plasma membrane CD14 and can prevent monocyte activation by bacterial lipopolysaccharide. 1 Phosphatidylinositides Phosphatidylinositides NOUN NNS Number=Plur _ _ _ _ 2 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 plasma plasma NOUN NN Number=Sing _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 11 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1745 # text = Although bacterial lipopolysaccharides (LPS) and several other microbial agonists can bind to mCD14 (membrane CD14), a cell-surface receptor found principally on monocytes and neutrophils, host-derived mCD14 ligands are poorly defined. 1 Although although SCONJ IN _ _ _ _ _ 2 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 3 lipopolysaccharides lipopolysaccharide NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 other other ADJ JJ Degree=Pos _ _ _ _ 10 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 11 agonists agonist NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 mCD14 mCD14 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 surface surface NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 principally principally ADV RB _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 mCD mcd NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 14 14 NUM CD NumType=Card _ _ _ _ 39 ligands ligand NOUN NNS Number=Plur _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 poorly poorly ADV RB _ _ _ _ _ 42 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1746 # text = We report here that phosphatidylinositol (PtdIns), phosphatidylinositol-4-phosphate, and other phosphatidylinositides can bind to mCD14. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 phosphate phosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 phosphatidylinositides phosphatidylinositide NOUN NNS Number=Plur _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1747 # text = Phosphatidylserine (PS), another anionic glycerophospholipid, binds to mCD14 with lower apparent affinity than does PtdIns. 1 Phosphatidylserine Phosphatidylserine NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PS ps NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 another another DET DT _ _ _ _ _ 7 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 8 glycerophospholipid glycerophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 binds bind NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 mCD14 mCD14 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 lower lower ADJ JJR Degree=Cmp _ _ _ _ 15 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 16 affinity affinity NOUN NN Number=Sing _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 does do VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1748 # text = LPS-binding protein, a lipid transfer protein found in serum, facilitates both PS- and PtdIns-mCD14 binding. 1 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 8 transfer transfer NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 facilitates facilitate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 PS ps NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PtdIns- PtdIns- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 mCD14 mCD14 NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1749 # text = PtdIns binding to mCD14 can be blocked by anti-CD14 monoclonal antibodies that inhibit LPS-mCD14 binding, and PtdIns can inhibit both LPS-mCD14 binding and LPS-induced responses in monocytes. 1 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 anti-CD anti-cd ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 14 14 NUM CD NumType=Card _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mCD14 mcd14 NOUN NN Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mCD14 mcd14 PROPN NNP Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 responses response NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1750 # text = Serum-equilibrated PtdIns also binds to mCD14-expressing cells, raising the possibility that endogenous PtdIns may modulate cellular responses to LPS and other mCD14 ligands in vivo. 1 Serum- Serum- SYM NFP _ _ _ _ SpaceAfter=No 2 equilibrated equilibrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PtdIns PtdIns NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -expressing -expressing ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 raising raise VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 possibility possibility NOUN NN Number=Sing _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 19 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 20 responses response NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 LPS LPS NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 mCD mcd NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 14 14 NUM CD NumType=Card _ _ _ _ 27 ligands ligand NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1751 # text = Document 00300174 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300174 00300174 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1752 # text = The peri-kappa B site mediates human immunodeficiency virus type 2 enhancer activation in monocytes but not in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1753 # text = Human immunodeficiency virus type 2 (HIV-2), like HIV-1, causes AIDS and is associated with AIDS cases primarily in 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 like like ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 AIDS aid NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 AIDS aids NOUN NN Number=Sing _ _ _ _ 24 cases case NOUN NNS Number=Plur _ _ _ _ 25 primarily primarily ADV RB _ _ _ _ _ 26 in in ADV RB _ _ _ _ _ # sent_id = 1754 # text = West Africa. 1 West West PROPN NNP Number=Sing _ _ _ _ 2 Africa Africa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 1755 # text = HIV-1 and HIV-2 display significant differences in nucleic acid sequence and in the natural history of clinical disease. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 display display NOUN NN Number=Sing _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 differences difference NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nucleic nucleic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 natural natural ADJ JJ Degree=Pos _ _ _ _ 19 history history NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1756 # text = Consistent with these differences, we have previously demonstrated that the enhancer/promoter region of HIV-2 functions quite differently from that of HIV-1. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 functions function NOUN NNS Number=Plur _ _ _ _ 21 quite quite ADV RB _ _ _ _ _ 22 differently differently ADV RB _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1757 # text = Whereas activation of the HIV-1 enhancer following T-cell stimulation is mediated largely through binding of the transcription factor NF-kappa B to two adjacent kappa B sites in the HIV-1 long terminal repeat, activation of the HIV-2 enhancer in monocytes and T cells is dependent on four cis-acting elements: a single kappa B site, two purine-rich binding sites, PuB1 and PuB2, and a pets site. 1 Whereas whereas ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 T- T- PUNCT : _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 largely largely ADV RB _ _ _ _ _ 16 through through ADV RB _ _ _ _ _ 17 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 sites site NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ _ 38 terminal terminal NOUN NN Number=Sing _ _ _ _ 39 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 T t NOUN NN Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ _ 53 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 55 on on ADP IN _ _ _ _ _ 56 four four NUM CD NumType=Card _ _ _ _ 57 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 59 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 : : PUNCT : _ _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 single single ADJ JJ Degree=Pos _ _ _ _ 63 kappa kappa NOUN NN Number=Sing _ _ _ _ 64 B b NOUN NN Number=Sing _ _ _ _ 65 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 two two NUM CD NumType=Card _ _ _ _ 68 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - SYM SYM _ _ _ _ SpaceAfter=No 70 rich rich ADJ JJ Degree=Pos _ _ _ _ 71 binding binding VERB VBG VerbForm=Ger _ _ _ _ 72 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 73 , , PUNCT , _ _ _ _ _ 74 PuB1 Pub1 NOUN NN Number=Sing _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 PuB2 Pub2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 , , PUNCT , _ _ _ _ _ 78 and and CCONJ CC _ _ _ _ _ 79 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 80 pets pet NOUN NN Number=Sing _ _ _ _ 81 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 . . PUNCT . _ _ _ _ _ # sent_id = 1758 # text = We have now identified a novel cis-acting element within the HIV-2 enhancer, immediately upstream of the kappa B site, designated peri-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 immediately immediately ADV RB _ _ _ _ _ 18 upstream upstream NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1759 # text = This site is conserved among isolates of HIV-2 and the closely related simian immunodeficiency virus, and transfection assays show this site to mediate HIV-2 enhancer activation following stimulation of monocytic but not T-cell lines. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 among among ADP IN _ _ _ _ _ 6 isolates isolate NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 closely closely ADV RB _ _ _ _ _ 14 related relate ADJ JJ Degree=Pos _ _ _ _ 15 simian simian ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 following follow VERB VBG VerbForm=Ger _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not ADV RB _ _ _ _ _ 38 T- T- SYM NFP _ _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1760 # text = This is the first description of an HIV-2 enhancer element which displays such monocyte specificity, and no comparable enhancer element has been clearly defined for HIV-1. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 description description NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 no no DET DT _ _ _ _ _ 21 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 clearly clearly ADV RB _ _ _ _ _ 27 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1761 # text = While a nuclear factor(s) from both peripheral blood monocytes and T cells binds the peri-kappa B site, electrophoretic mobility shift assays suggest that either a different protein binds to this site in monocytes versus T cells or that the protein recognizing this enhancer element undergoes differential modification in monocytes and T cells, thus supporting the transfection data. 1 While while SCONJ IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 s s X AFX _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 23 mobility mobility NOUN NN Number=Sing _ _ _ _ 24 shift shift NOUN NN Number=Sing _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ _ 26 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 either either DET DT _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 binds bind NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 38 versus versus ADP IN _ _ _ _ _ 39 T T PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 that that SCONJ IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 46 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 element element NOUN NN Number=Sing _ _ _ _ 49 undergoes undergo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 differential differential ADJ JJ Degree=Pos _ _ _ _ 51 modification modification NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 T t NOUN NN Number=Sing _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 thus thus ADV RB _ _ _ _ _ 59 supporting support VERB VBG VerbForm=Ger _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 transfection transfection NOUN NN Number=Sing _ _ _ _ 62 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 1762 # text = Further, while specific constitutive binding to the peri-kappa B site is seen in monocytes, stimulation with phorbol esters induces additional, specific binding. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 constitutive constitutive NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 esters ester NOUN NNS Number=Plur _ _ _ _ 21 induces induce ADV RB _ _ _ _ _ 22 additional additional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1763 # text = Understanding the monocyte-specific function of the peri-kappa B factor may ultimately provide insight into the different role monocytes and T cells play in HIV pathogenesis. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 ultimately ultimately ADV RB _ _ _ _ _ 13 provide provide VERB VB VerbForm=Inf _ _ _ _ 14 insight insight NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 play play VERB VB VerbForm=Inf _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ _ 26 pathogenesis pathogenesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1764 # text = Document 00300175 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300175 00300175 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1765 # text = Suppressive effects of anti-inflammatory agents on human endothelial cell activation and induction of heat shock proteins. 1 Suppressive Suppressive ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 agents agent NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1766 # text = BACKGROUND: Studies from our laboratory have shown that the earliest stages of atherosclerosis may be mediated by an autoimmune reaction against heat shock protein 60 (Hsp60). 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Studies study NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 12 stages stage NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 21 reaction reaction NOUN NN Number=Sing _ _ _ _ 22 against against ADP IN _ _ _ _ _ 23 heat heat NOUN NN Number=Sing _ _ _ _ 24 shock shock NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 60 60 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1767 # text = The interactions of Hsp60-specific 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -specific -specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1768 # text = T cells with arterial endothelial cells (EC) require expression of both Hsp60 and certain adhesion molecules shown to be induced simultaneously in EC by mechanical and other types of stress. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 Hsp60 Hsp60 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 certain certain ADJ JJ Degree=Pos _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 simultaneously simultaneously ADV RB _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 EC EC PROPN NNP Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 types type NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1769 # text = Recently, it was shown that suppression of T cell-mediated immune responses by cyclosporin A (CyA) enhanced atherosclerotic lesion formation in mice. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 responses response NOUN NNS Number=Plur _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 17 A a PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 23 lesion lesion NOUN NN Number=Sing _ _ _ _ 24 formation formation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1770 # text = In contrast, aspirin was found to lower the risk of myocardial infarction in men. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 lower lower VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 risk risk NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 13 infarction infarction NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 men man NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1771 # text = These conflicting observations may be due to different effects of anti-inflammatory agents on adhesion molecule and Hsp expression in EC, respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 conflicting conflicting ADJ JJ Degree=Pos _ _ _ _ 3 observations observation NOUN NNS Number=Plur _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 due due ADP IN _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 molecule molecule NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Hsp Hsp NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1772 # text = MATERIAL AND METHODS: 1 MATERIAL material NOUN NN Number=Sing _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 1773 # text = In the present study, we analyzed the effects of CyA, aspirin, and indomethacin on T cell proliferation using a proliferation assay. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CyA Cya PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 indomethacin indomethacin ADV RB _ _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 24 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1774 # text = To explore the expression of adhesion molecules, monocyte chemoattractant protein-1 (MCP-1), and Hsp60 in human umbilical vein endothelial cells (HUVECs), Northern blot analyses were used. 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 24 vein vein NOUN NN Number=Sing _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ _ 33 analyses analysis NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1775 # text = To examine the activation status of the transcription factors nuclear factor kappaB (NF-kappaB) and heat shock factor-1 (HSF-1), electrophoretic mobility shift assays were performed. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 status status NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 heat heat NOUN NN Number=Sing _ _ _ _ 20 shock shock NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 HSF Hsf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 shift shift NOUN NN Number=Sing _ _ _ _ 32 assays assay NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1776 # text = RESULTS: With the exception of indomethacin, the used immunosuppressive and anti-inflammatory agents significantly inhibited T cell proliferation in response to influenza virus antigen in a dose-dependent manner. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 With with SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 exception exception NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 indomethacin indomethacin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 used use ADJ JJ Degree=Pos _ _ _ _ 11 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 agents agent NOUN NNS Number=Plur _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 influenza influenza ADJ JJ Degree=Pos _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1777 # text = Interestingly, CyA and indomethacin did not suppress tumor necrosis factor-alpha (TNF-alpha)-induced adhesion molecule expression on HUVECs, whereas aspirin had an inhibitory effect. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CyA CyA PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 indomethacin indomethacin ADV RB _ _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 HUVECs Huvecs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 28 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1778 # text = These observations correlated with the modulation of NF-kappaB activity in EC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 modulation modulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1779 # text = All agents tested induced expression of Hsp60 6 hr after application. 1 All all DET DT _ _ _ _ _ 2 agents agent NOUN NNS Number=Plur _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 hr hr NOUN NN Number=Sing _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 application application NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1780 # text = In addition, aspirin and indomethacin, but not CyA, induced Hsp70 expression in HUVECs that correlated with induction of HSF-1 activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 aspirin aspirin ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 indomethacin indomethacin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 HSF HSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1781 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 1782 # text = Our results show that the tested agents (except indomethacin) are inhibitors of the T cell-mediated immune response, as expected, that aspirin is an effective suppressor of adhesion molecule expression, and that all three agents can induce Hsp60 in HUVECs. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 agents agent NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 except except ADP IN _ _ _ _ _ 10 indomethacin indomethacin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 27 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 effective effective ADJ JJ Degree=Pos _ _ _ _ 31 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 all all DET DT _ _ _ _ _ 40 three three NUM CD NumType=Card _ _ _ _ 41 agents agent NOUN NNS Number=Plur _ _ _ _ 42 can can AUX MD VerbForm=Fin _ _ _ _ 43 induce induce VERB VB VerbForm=Inf _ _ _ _ 44 Hsp60 Hsp60 PROPN NNP Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1783 # text = These data provide the molecular basis for the notion that (1) part of the anti-atherogenic effect of aspirin may be due to the prevention of the adhesion of sensitized T cells to stressed EC; (2) that part of the atherosclerosis-promoting effect of CyA may be due to its potential as an inducer of Hsp60 expression and its inability to down-regulate adhesion molecule expression on EC; and (3) that down-regulation of MCP-1 expression by aspirin may result in decreased recruitment of monocytes into the arterial intima beneath stressed EC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 basis basis NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 notion notion NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 part part NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 anti-atherogenic anti-atherogenic ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 prevention prevention NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 sensitized sensitize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 stressed stress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 EC Ec PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 42 part part NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 48 effect effect NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 CyA CyA PROPN NNP Number=Sing _ _ _ _ 51 may may AUX MD VerbForm=Fin _ _ _ _ 52 be be AUX VB VerbForm=Inf _ _ _ _ 53 due due ADP IN _ _ _ _ _ 54 to to ADP IN _ _ _ _ _ 55 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 potential potential NOUN NN Number=Sing _ _ _ _ 57 as as ADP IN _ _ _ _ _ 58 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 inducer inducer NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 65 inability inability NOUN NN Number=Sing _ _ _ _ 66 to to ADP IN _ _ _ _ _ 67 down down ADV RB _ _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 70 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 71 molecule molecule NOUN NN Number=Sing _ _ _ _ 72 expression expression NOUN NN Number=Sing _ _ _ _ 73 on on ADP IN _ _ _ _ _ 74 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 ; ; PUNCT , _ _ _ _ _ 76 and and CCONJ CC _ _ _ _ _ 77 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 78 3 3 X LS _ _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ _ 80 that that SCONJ IN _ _ _ _ _ 81 down down ADV RB _ _ _ _ SpaceAfter=No 82 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 83 regulation regulation NOUN NN Number=Sing _ _ _ _ 84 of of ADP IN _ _ _ _ _ 85 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 86 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 87 1 1 NUM CD NumType=Card _ _ _ _ 88 expression expression NOUN NN Number=Sing _ _ _ _ 89 by by ADP IN _ _ _ _ _ 90 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 91 may may AUX MD VerbForm=Fin _ _ _ _ 92 result result VERB VB VerbForm=Inf _ _ _ _ 93 in in ADP IN _ _ _ _ _ 94 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 95 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 96 of of ADP IN _ _ _ _ _ 97 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 98 into into ADP IN _ _ _ _ _ 99 the the DET DT Definite=Def|PronType=Art _ _ _ _ 100 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 101 intima intima NOUN NN Number=Sing _ _ _ _ 102 beneath beneath ADP IN _ _ _ _ _ 103 stressed stress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 104 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 105 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1784 # text = Document 00300176 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300176 00300176 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1785 # text = Distinct roles of the molecular chaperone hsp90 in modulating dioxin receptor function via the basic helix-loop-helix and PAS domains. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 chaperone chaperone NOUN NN Number=Sing _ _ _ _ 7 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 10 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 basic basic ADJ JJ Degree=Pos _ _ _ _ 16 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 helix helix NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 PAS Pas NOUN NN Number=Sing _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1786 # text = The intracellular dioxin receptor mediates signal transduction by dioxin and functions as a ligand-activated transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1787 # text = It contains a basic helix-loop-helix (bHLH) motif contiguous with a Per-Arnt-Sim (PAS) homology region. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -helix -helix NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 contiguous contiguous ADJ JJ Degree=Pos _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 Per- per- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 Arnt Arnt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Sim Sim PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PAS PAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 homology homology NOUN NN Number=Sing _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1788 # text = In extracts from nonstimulated cells the receptor is recovered in an inducible cytoplasmic form associated with the 90-kDa heat shock protein (hsp90), a molecular chaperone. 1 In in ADP IN _ _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 nonstimulated nonstimulate ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 recovered recover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 form form NOUN NN Number=Sing _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kDa kDa NOUN NN Number=Sing _ _ _ _ 21 heat heat NOUN NN Number=Sing _ _ _ _ 22 shock shock NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 30 chaperone chaperone NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1789 # text = We have reconstituted ligand-dependent activation of the receptor to a DNA-binding form by using the dioxin receptor and its bHLH-PAS partner factor 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 bHLH bHLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 PAS Pas NOUN NN Number=Sing _ _ _ _ 27 partner partner NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 1790 # text = Arnt expressed by in vitro translation in reticulocyte lysate. 1 Arnt Arnt NOUN NN Number=Sing _ _ _ _ 2 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 6 translation translation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 reticulocyte reticulocyte ADJ JJ Degree=Pos _ _ _ _ 9 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1791 # text = Deletion of the PAS domain of the receptor resulted in constitutive dimerization with Arnt. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PAS PAS PROPN NNP Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 12 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Arnt Arnt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1792 # text = In contrast, this receptor mutant showed low levels of xenobiotic response element-binding activity, indicating that the PAS domain may be important for DNA-binding affinity and/or specificity of the receptor. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 low low ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 xenobiotic xenobiotic ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 PAS Pas NOUN NN Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 affinity affinity NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 or or CCONJ CC _ _ _ _ _ 34 specificity specificity NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1793 # text = It was not possible to reconstitute dioxin receptor function with proteins expressed in wheat germ lysate. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 7 dioxin dioxin ADP IN _ _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 wheat wheat NOUN NN Number=Sing _ _ _ _ 15 germ germ NOUN NN Number=Sing _ _ _ _ 16 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1794 # text = In line with these observations, reticulocyte lysate but not wheat germ lysate promoted the association of de novo synthesized dioxin receptor with hsp90. 1 In in ADP IN _ _ _ _ _ 2 line line NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 reticulocyte reticulocyte VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 8 lysate lysate NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 wheat wheat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 germ germ NOUN NN Number=Sing _ _ _ _ 13 lysate lysate NOUN NN Number=Sing _ _ _ _ 14 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 de de PROPN NNP Number=Sing _ _ _ _ 19 novo novo ADV RB _ _ _ _ _ 20 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1795 # text = At least two distinct domains of the receptor mediated interaction with hsp90: the ligand-binding domain located within the PAS region and, surprisingly, the bHLH domain. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 domains domains NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 domain domain NOUN NN Number=Sing _ _ _ _ 19 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 PAS Pas PROPN NNP Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 bHLH bhlh ADJ JJ Degree=Pos _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1796 # text = Whereas ligand-binding activity correlated with association with hsp90, bHLH-hsp90 interaction appeared to be important for DNA-binding activity but not for dimerization of the receptor. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bHLH bHLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 15 interaction interaction NOUN NN Number=Sing _ _ _ _ 16 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1797 # text = Several distinct roles for hsp90 in modulating dioxin receptor function are therefore likely: correct folding of the ligand-binding domain, interference with Arnt heterodimerization, and folding of a DNA-binding conformation of the bHLH domain. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 roles role NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 8 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 therefore therefore ADV RB _ _ _ _ _ 13 likely likely ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 correct correct ADJ JJ Degree=Pos _ _ _ _ 16 folding folding NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 interference interference NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 Arnt Arnt PROPN NNP Number=Sing _ _ _ _ 27 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 folding folding NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 binding bind VERB VBG VerbForm=Ger _ _ _ _ 36 conformation conformation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 bHLH bHLH ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 40 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1798 # text = Thus, the dioxin receptor system provides a complex and interesting model of the regulation of transcription factors by hsp90. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 system system NOUN NN Number=Sing _ _ _ _ 7 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 complex complex ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 interesting interesting ADJ JJ Degree=Pos _ _ _ _ 12 model model NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1799 # text = Document 00300177 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300177 00300177 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1800 # text = Danazol decreases transcription of estrogen receptor gene in human monocytes. 1 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 2 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 estrogen estrogen NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1801 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 1802 # text = Administration of danazol for over one month reduced the levels of estrogen receptor (ER) and its mRNA to approximately 50 and 20%, respectively in monocytes. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 danazol danazol NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 over over ADV RB _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 month month NOUN NN Number=Sing _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 19 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 approximately approximately VERB VB VerbForm=Inf _ _ _ _ 23 50 50 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 respectively respectively ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1803 # text = 2. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 1804 # text = Danazol did not alter the degradation rate of ER mRNA in monocytes. 1 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 2 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 alter alter VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ER er NOUN NN Number=Sing _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1805 # text = 3. Danazol decreased the transcription rate of ER gene to approximately 50% in monocytes in a run-on assay. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 4 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ER er NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 on on ADP IN _ _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1806 # text = 4. Danazol may release estrogen predominance via the reduction of transcription for ER gene, which leads to the reduction of ER mRNA and ER expressions in monocytes. 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 release release VERB VB VerbForm=Inf _ _ _ _ 6 estrogen estrogen NUM CD NumType=Card _ _ _ _ 7 predominance predominance NOUN NN Number=Sing _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 reduction reduction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 ER er NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 reduction reduction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 ER er NOUN NN Number=Sing _ _ _ _ 24 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 ER er NOUN NN Number=Sing _ _ _ _ 27 expressions expression NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1807 # text = Document 00300178 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300178 00300178 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1808 # text = An intricate arrangement of binding sites for the Ets family of transcription factors regulates activity of the alpha 4 integrin gene promoter. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 intricate intricate ADJ JJ Degree=Pos _ _ _ _ 3 arrangement arrangement NOUN NN Number=Sing _ _ _ _ 4 of of SCONJ IN _ _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Ets ets PROPN NNPS Number=Plur _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 4 4 NUM CD NumType=Card _ _ _ _ 20 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1809 # text = alpha 4 integrins mediate cell-cell and cell-extracellular matrix interactions that are critical for maturation and function of the immune system as well as differentiation of skeletal muscle. 1 alpha alpha ADV RB _ _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 integrins integrin NOUN NNS Number=Plur _ _ _ _ 4 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 12 matrix matrix NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 critical critical ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 maturation maturation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 skeletal skeletal ADJ JJ Degree=Pos _ _ _ _ 31 muscle muscle NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1810 # text = Here we examine molecular mechanisms controlling the pattern of alpha 4 expression. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 examine examine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pattern pattern NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 alpha alpha ADV RB _ _ _ _ _ 11 4 4 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1811 # text = The activity of constructs containing 5' deletion mutants of the alpha 4 gene promoter was compared in transfection assays into cell lines that express alpha 4 and cell lines that do not. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 mutants mutant NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 transfection transfection NOUN NN Number=Sing _ _ _ _ 20 assays assays ADV RB _ _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 alpha alpha ADV RB _ _ _ _ _ 27 4 4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 lines line NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 do do VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1812 # text = The sequence between position -42 and -76 base pairs (bp) was required for efficient transcription in cells that express alpha 4, but it showed no activity in HeLa cells, which do not express alpha 4. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 position position NOUN NN Number=Sing _ _ _ _ 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 42 42 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 76 76 NUM CD NumType=Card _ _ _ _ 10 base base NOUN NN Number=Sing _ _ _ _ 11 pairs pair NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 alpha alpha ADV RB _ _ _ _ _ 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 no no DET DT _ _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 express express VERB VB VerbForm=Inf _ _ _ _ 40 alpha alpha ADP IN _ _ _ _ _ 41 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1813 # text = Three binding sites for the Ets family of transcription factors are found in this region: two adjacent sites at positions -50 and -54 bp and a more 5' site at position -67 bp. 1 Three three VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ets ets PROPN NNPS Number=Plur _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 positions position NOUN NNS Number=Plur _ _ _ _ 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 50 50 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 54 54 NUM CD NumType=Card _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 more more ADJ JJR Degree=Cmp _ _ _ _ 31 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ' ' PUNCT `` _ _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 position position NOUN NN Number=Sing _ _ _ _ 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 67 67 NUM CD NumType=Card _ _ _ _ 38 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1814 # text = Using a series of constructs containing deletions and mutations in this region, we found that the 3'-most site alone was sufficient for binding GA-binding protein alpha (GABP alpha)/GABP beta and for a low level of transcriptional activation. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 series series NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 constructs constructs NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 deletions deletion NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 alone alone ADV RB _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 GA ga NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GABP Gabp NOUN NN Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 GABP GABP PROPN NNP Number=Sing _ _ _ _ 39 beta beta PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 level level NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1815 # text = When all three sites were present, a second complex "a" was detected, which contains an unknown member of the Ets family. 1 When when ADV WRB PronType=Int _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 three three NUM CD NumType=Card _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 " " PUNCT `` _ _ _ _ SpaceAfter=No 12 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 " " PUNCT '' _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Int _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 21 member member NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Ets et PROPN NNPS Number=Plur _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1816 # text = Formation of complex a was cell-type specific and correlated with a high level of transcription. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 type type NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1817 # text = Deletion of the 5'-most Ets site had no effect on binding to GABP alpha/GABP beta, but it eliminated a. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 most most ADJ JJS Degree=Sup _ _ _ _ 8 Ets et NOUN NNS Number=Plur _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 on on SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 GABP GABP PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 GABP GABP PROPN NNP Number=Sing _ _ _ _ 20 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 eliminated eliminate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1818 # text = Concomitant with this loss of a, a new Ets-1-containing complex "c" appeared. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 new new ADJ JJ Degree=Pos _ _ _ _ 10 Ets Ets PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 " " PUNCT `` _ _ _ _ SpaceAfter=No 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 " " PUNCT '' _ _ _ _ _ 19 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1819 # text = Complex c substituted efficiently for complex a in transcriptional activation. 1 Complex complex NOUN NN Number=Sing _ _ _ _ 2 c care NOUN NN Number=Sing _ _ _ _ 3 substituted substitute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 efficiently efficiently ADV RB _ _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 complex complex NUM CD NumType=Card _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1820 # text = We conclude that although neither of the two 5'-most Ets sites alone binds nuclear protein, they appear to act as modulators which control the pattern of Ets proteins that bind the alpha 4 gene promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 neither neither DET DT _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 most most ADJ JJS Degree=Sup _ _ _ _ 13 Ets et NOUN NNS Number=Plur _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 alone alone ADV RB _ _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 act act VERB VB VerbForm=Inf _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 modulators modulator NOUN NNS Number=Plur _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pattern pattern NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Ets ets NOUN NNS Number=Plur _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 4 4 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1821 # text = This arrangement of Ets sites, coupled with the tissue- and developmental-specific expression of Ets members, likely play a key role in defining the pattern of alpha 4 integrin. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 arrangement arrangement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Ets ets NOUN NNS Number=Plur _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 developmental developmental ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Ets ets NOUN NNS Number=Plur _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 likely likely ADV RB _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 key key ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in SCONJ IN _ _ _ _ _ 27 defining define VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pattern pattern NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 alpha alpha ADV RB _ _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ _ 33 integrin integrin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1822 # text = Document 00300179 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300179 00300179 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1823 # text = Kappa B-specific DNA binding proteins are differentially inhibited by enhancer mutations and biological oxidation. 1 Kappa Kappa PROPN NNP Number=Sing _ _ _ _ 2 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 differentially differentially ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 mutations mutation NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 biological biological ADJ JJ Degree=Pos _ _ _ _ 16 oxidation oxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1824 # text = Kappa B 1 Kappa Kappa PROPN NNP Number=Sing _ _ _ _ 2 B B PROPN NNP Number=Sing _ _ _ _ # sent_id = 1825 # text = (kappa 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 1826 # text = B) enhancer binding proteins isolated from the nuclei of activated human T cells produce two distinct nucleoprotein complexes when incubated with the kappa B element from the interleukin-2 receptor-alpha (IL-2R alpha) gene. 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 18 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 19 complexes complex NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2R 2r NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1827 # text = These two DNA-protein complexes are composed of at least four host proteins (p50, p55, p75, p85), each of which shares structural similarity with the v-rel oncogene product. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 at at ADV RB _ _ _ _ _ 11 least least ADV RBS Degree=Sup _ _ _ _ 12 four four NUM CD NumType=Card _ _ _ _ 13 host host NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p55 p55 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 p75 p75 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p85 p85 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 each each DET DT _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Int _ _ _ _ 28 shares share NOUN NNS Number=Plur _ _ _ _ 29 structural structural ADJ JJ Degree=Pos _ _ _ _ 30 similarity similarity NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 v- v- SYM NFP _ _ _ _ SpaceAfter=No 34 rel rel ADJ JJ Degree=Pos _ _ _ _ 35 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 36 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1828 # text = Nuclear expression of these proteins is induced with distinctly biphasic kinetics following phorbol ester activation of T cells (p55/p75 early and p50/p85 late). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 distinctly distinctly ADV RB _ _ _ _ _ 10 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 11 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 14 ester ester NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p75 p75 NOUN NN Number=Sing _ _ _ _ 23 early early ADV RB Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 p50/ p50/ SYM SYM _ _ _ _ SpaceAfter=No 26 p85 p85 NUM CD NumType=Card _ _ _ _ 27 late late ADV RB Degree=Pos _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1829 # text = DNA-protein crosslinking studies have revealed that the more rapidly migrating B2 complex contains both p50 and p55 while the more slowly migrating B1 complex is composed of p50, p55, p75, and p85. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 crosslinking crosslink NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 more more ADV RBR _ _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 12 B2 b2 NUM CD NumType=Card _ _ _ _ 13 complex complex ADJ JJ Degree=Pos _ _ _ _ 14 contains contain NOUN NNS Number=Plur _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 p50 p50 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p55 p55 NOUN NN Number=Sing _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 more more ADV RBR _ _ _ _ _ 22 slowly slowly ADV RB _ _ _ _ _ 23 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 24 B1 b1 NUM CD NumType=Card _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 p75 p75 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 p85 p85 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1830 # text = Site-directed mutagenesis of the wild-type IL-2R alpha kappa B enhancer (GGGGAATCTCCC) has revealed that the binding of p50 and p55 (B2 complex) is particularly sensitive to alteration of the 5' triplet of deoxyguanosine residues. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2R 2r NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 GGGGAATCTCCC GGGGAATCTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p55 p55 NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 B2 b2 NUM CD NumType=Card _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 particularly particularly ADV RB _ _ _ _ _ 35 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 alteration alteration NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT `` _ _ _ _ _ 42 triplet triplet NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 deoxyguanosine deoxyguanosine NOUN NN Number=Sing _ _ _ _ 45 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1831 # text = In contrast, formation of the B1 complex, reflecting the binding of p75 and p85, critically depends upon the more 3' sequences of this enhancer element. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 formation formation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 B1 B1 PROPN NNP Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 reflecting reflecte VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p75 p75 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p85 p85 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 critically critically ADV RB _ _ _ _ _ 19 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 upon upon ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 more more ADJ JJR Degree=Cmp _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ' ' PUNCT `` _ _ _ _ _ 25 sequences sequence NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1832 # text = DNA binding by all four of these Rel-related factors is blocked by selective chemical modification of lysine and arginine residues, suggesting that both of these basic amino acids are required for binding to the kappa B element. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 all all DET DT _ _ _ _ _ 5 four four NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 Rel-related Rel-relate ADJ JJ Degree=Pos _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 selective selective ADJ JJ Degree=Pos _ _ _ _ 14 chemical chemical ADJ JJ Degree=Pos _ _ _ _ 15 modification modification NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lysine lysine NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 arginine arginine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 basic basic ADJ JJ Degree=Pos _ _ _ _ 28 amino amino NOUN NN Number=Sing _ _ _ _ 29 acids acid NOUN NNS Number=Plur _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for SCONJ IN _ _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1833 # text = Similarly, covalent modification of free sulfhydryl groups with diamide (reversible) or N-ethylmaleimide (irreversible) results in a complete loss of DNA binding activity. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 covalent covalent ADJ JJ Degree=Pos _ _ _ _ 4 modification modification NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 sulfhydryl sulfhydryl NOUN NN Number=Sing _ _ _ _ 8 groups group NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 diamide diamide NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 N not PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 ethylmaleimide ethylmaleimide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 irreversible irreversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 results result NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 complete complete ADJ JJ Degree=Pos _ _ _ _ 25 loss loss NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1834 # text = In contrast, mild oxidation with glucose oxidase selectively inhibits p75 and p85 binding while not blocking p50 and p55 interactions. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mild mild ADJ JJ Degree=Pos _ _ _ _ 5 oxidation oxidation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 glucose glucose NOUN NN Number=Sing _ _ _ _ 8 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 p75 p75 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p85 p85 NUM CD NumType=Card _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 p55 p55 NUM CD NumType=Card _ _ _ _ 21 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1835 # text = These findings suggest that reduced cysteine thiols play an important role in the DNA binding activity of this family of Rel-related transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 7 thiols thiol NOUN NNS Number=Plur _ _ _ _ 8 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Rel- Rel- X GW _ _ _ _ SpaceAfter=No 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1836 # text = Document 00300180 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300180 00300180 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1837 # text = Involvement of tyrosine phosphorylation in endothelial adhesion molecule induction. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1838 # text = Induction of endothelial adhesion molecules by the cytokine tumor necrosis factor-alpha (TNF) can occur independently of protein kinase C and activation of a protein tyrosine kinase (PTK) has recently been implicated in the upregulation of vascular cell adhesion molecule 1 (VCAM-1) by interleukin-4 (IL-4) on endothelial cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 molecules molecule NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 occur occur VERB VB VerbForm=Inf _ _ _ _ 19 independently independently ADV RB _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 C c NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 recently recently ADV RB _ _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 45 molecule molecule NOUN NN Number=Sing _ _ _ _ 46 1 1 NUM CD NumType=Card _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 1 1 X LS _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT , _ _ _ _ SpaceAfter=No 55 4 4 NUM CD NumType=Card _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 on on ADP IN _ _ _ _ _ 62 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 1839 # text = We demonstrate that the PTK inhibitors herbimycin A or genistein suppress induction of endothelial VCAM-1 and E-selectin, as well as subsequent monocytic cell adhesion to endothelial cells stimulated by TNF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 PTK Ptk NOUN NN Number=Sing _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 7 herbimycin herbimycin ADP IN _ _ _ _ _ 8 A a NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 genistein genistein NOUN NN Number=Sing _ _ _ _ 11 suppress suppress NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1840 # text = Inhibition studies indicate that specific tyrosine phosphorylation following PTK activation is involved in the mobilization of the transcription factor, nuclear factor kappa B, and VCAM-1 mRNA expression. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 PTK PTK NUM CD NumType=Card _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1841 # text = This may have implications for pathophysiological conditions that involve the upregulation of these molecules (e.g. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 have have VERB VB VerbForm=Inf _ _ _ _ 4 implications implication NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 7 conditions condition NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 e.g. e.g. X FW _ _ _ _ _ # sent_id = 1842 # text = inflammation and atherosclerosis). 1 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1843 # text = Document 00300181 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300181 00300181 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1844 # text = Glycation-dependent, reactive oxygen species-mediated suppression of the insulin gene promoter activity in HIT cells. 1 Glycation Glycation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 6 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 7 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 suppression suppression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HIT Hit ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1845 # text = Prolonged poor glycemic control in non-insulin-dependent diabetes mellitus patients often leads to a decline in insulin secretion from pancreatic beta cells, accompanied by a decrease in the insulin content of the cells. 1 Prolonged Prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 poor poor ADJ JJ Degree=Pos _ _ _ _ 3 glycemic glycemic ADJ JJ Degree=Pos _ _ _ _ 4 control control NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non-insulin non-insulin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 10 mellitus mellitus CCONJ CC _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 often often ADV RB _ _ _ _ _ 13 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 decline decline NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 decrease decrease NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 32 content content NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1846 # text = As a step toward elucidating the pathophysiological background of the so-called glucose toxicity to pancreatic beta cells, we induced glycation in HIT-T15 cells using a sugar with strong deoxidizing activity, D-ribose, and examined the effects on insulin gene transcription. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 step step NOUN NN Number=Sing _ _ _ _ 4 toward toward SCONJ IN _ _ _ _ _ 5 elucidating elucidat VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 8 background background NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 so so ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 glucose glucose DET DT Number=Plur|PronType=Dem _ _ _ _ 15 toxicity toxicity NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 glycation glycation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIT Hit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 15 15 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 using use VERB VBG VerbForm=Ger _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 sugar sugar NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 strong strong ADJ JJ Degree=Pos _ _ _ _ 35 deoxidizing deoxidizing NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 D- d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ribose ribose NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 effects effect NOUN NNS Number=Plur _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1847 # text = The results of reporter gene analyses revealed that the insulin gene promoter is more sensitive to glycation than the control beta-actin gene promoter; approximately 50 and 80% of the insulin gene promoter activity was lost when the cells were kept for 3 d in the presence of 40 and 60 mM 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 more more ADV RBR _ _ _ _ _ 15 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 glycation glycation NOUN NN Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 actin actin NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 approximately approximately ADV RB _ _ _ _ _ 28 50 50 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 when when ADV WRB PronType=Int _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 kept keep VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 3 3 NUM CD NumType=Card _ _ _ _ 47 d would PROPN NNP Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 presence presence NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 40 40 NUM CD NumType=Card _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 60 60 NUM CD NumType=Card _ _ _ _ 55 mM mm NOUN NN Number=Sing _ _ _ _ # sent_id = 1848 # text = D-ribose, respectively. 1 D- D- SYM NFP _ _ _ _ SpaceAfter=No 2 ribose ribose PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 1849 # text = In agreement with this, decrease in the insulin mRNA and insulin content was observed in the glycation-induced cells. 1 In in ADP IN _ _ _ _ _ 2 agreement agreement NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 decrease decrease NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 13 content content NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 glycation glycation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1850 # text = Also, gel mobility shift analyses using specific antiserum revealed decrease in the DNA-binding activity of an insulin gene transcription factor, PDX-1/IPF1/STF-1. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 decrease decrease NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 PDX PDX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1/IPF1/STF -1/IPF1/STF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1851 # text = These effects of D-ribose seemed almost irreversible but could be prevented by addition of 1 mM aminoguanidine or 10 mM N-acetylcysteine, thus suggesting that glycation and reactive oxygen species, generated through the glycation reaction, serve as mediators of the phenomena. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 D- d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ribose ribose PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 seemed seem VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 almost almost ADV RB _ _ _ _ _ 8 irreversible irreversible ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 mM mm NOUN NN Number=Sing _ _ _ _ 18 aminoguanidine aminoguanidine NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 10 10 NUM CD NumType=Card _ _ _ _ 21 mM mm NOUN NN Number=Sing _ _ _ _ 22 N- N- SYM SYM _ _ _ _ SpaceAfter=No 23 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 glycation glycation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 31 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 32 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 glycation glycation NOUN NN Number=Sing _ _ _ _ 38 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 as as SCONJ IN _ _ _ _ _ 42 mediators mediator NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 phenomena phenomena NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1852 # text = These observations suggest that protein glycation in pancreatic beta cells, which occurs in vivo under chronic hyperglycemia, suppresses insulin gene transcription and thus can explain part of the beta cell glucose toxicity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 glycation glycation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which DET WDT PronType=Int _ _ _ _ 13 occurs occurs NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 hyperglycemia hyperglycemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 21 insulin insulin ADP IN _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 explain explain VERB VB VerbForm=Inf _ _ _ _ 28 part part NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 glucose glucose NOUN NN Number=Sing _ _ _ _ 34 toxicity toxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1853 # text = Document 00300182 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300182 00300182 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1854 # text = Lactobacilli and vaginal host defense: activation of the human immunodeficiency virus type 1 long terminal repeat, cytokine production, and NF-kappaB. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 4 host host NOUN NN Number=Sing _ _ _ _ 5 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 long long ADJ JJ Degree=Pos _ _ _ _ 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1855 # text = Lactobacilli, a component of the normal vaginal flora, can activate the human immunodeficiency virus (HIV)-1 long terminal repeat (LTR) in the Jurkat T lymphocyte and THP-1 macrophage cell lines. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 component component NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 9 flora flora NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1856 # text = Activation of the LTR in Jurkat cells was strongly enhanced by vanadate and inhibited by catalase, implicating H2O2. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 LTR LTR PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 19 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1857 # text = In contrast, activation in THP-1 cells occurred in the absence of vanadate and was unaffected by catalase. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 absence absence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1858 # text = The active material partitioned into the phenol layer on hot aqueous phenol extraction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 material material NOUN NN Number=Sing _ _ _ _ 4 partitioned partition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phenol phenol NOUN NN Number=Sing _ _ _ _ 8 layer layer NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 hot hot ADJ JJ Degree=Pos _ _ _ _ 11 aqueous aqueous ADJ JJ Degree=Pos _ _ _ _ 12 phenol phenol NOUN NN Number=Sing _ _ _ _ 13 extraction extraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1859 # text = Lactobacilli also increased tumor necrosis factor-alphaand interleukin-1betaproduction and activated NF-kappaB in THP-1 cells and increased tumor necrosis factor-alphaproduction by human monocytes. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alphaand alphaand NOUN NN Number=Sing _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 betaproduction betaproduction NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -alphaproduction -alphaproduction NOUN NN Number=Sing _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1860 # text = Human vaginal fluid specimens had comparable properties, which correlated with their bacterial content. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 3 fluid fluid NOUN NN Number=Sing _ _ _ _ 4 specimens specimen NOUN NNS Number=Plur _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 7 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 content content NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1861 # text = These findings suggest the presence in vaginal fluid of agent(s) derived from indigenous bacteria that can activate the HIV-1 LTR, cytokine production, and NF-kappaB in cells of macrophage lineage, with possible influence on vaginal physiology and host defense. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 8 fluid fluid NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 s s X AFX _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 indigenous indigenous ADJ JJ Degree=Pos _ _ _ _ 17 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 38 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 with with SCONJ IN _ _ _ _ _ 41 possible possible ADJ JJ Degree=Pos _ _ _ _ 42 influence influence NOUN NN Number=Sing _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 45 physiology physiology NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 host host NOUN NN Number=Sing _ _ _ _ 48 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1862 # text = Document 00300183 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300183 00300183 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1863 # text = Human T-cell leukemia virus type 1 Tax induction of NF-kappaB involves activation of the IkappaB kinase alpha (IKKalpha) and IKKbeta cellular kinases. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1864 # text = Tax corresponds to a 40-kDa transforming protein from the pathogenic retrovirus human T-cell leukemia virus type 1 (HTLV-1) that activates nuclear expression of the NF-kappaB/Rel family of transcription factors by an unknown mechanism. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 13 retrovirus retrovirus ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Rel Rel PROPN NNP Number=Sing _ _ _ _ 37 family family NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 44 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1865 # text = Tax expression promotes N-terminal phosphorylation and degradation of IkappaB alpha, a principal cytoplasmic inhibitor of NF-kappaB. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 promotes promote NOUN NNS Number=Plur _ _ _ _ 4 N- N- PUNCT : _ _ _ _ SpaceAfter=No 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 principal principal ADJ JJ Degree=Pos _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1866 # text = Our studies now demonstrate that HTLV-1 Tax activates the recently identified cellular kinases IkappaB kinase alpha (IKKalpha) and IKKbeta, which normally phosphorylate IkappaB alpha on both of its N-terminal regulatory serines in response to tumor necrosis factor alpha (TNF-alpha) and interleukin-1 (IL-1) stimulation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 Tax Tax NOUN NN Number=Sing _ _ _ _ 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 kinases kinase NOUN NNS Number=Plur _ _ _ _ 16 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 normally normally ADV RB _ _ _ _ _ 27 phosphorylate phosphorylate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 IkappaB Ikappab ADJ JJ Degree=Pos _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 serines serine NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 tumor tumor NOUN NN Number=Sing _ _ _ _ 42 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 alpha alpha NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ _ 59 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 1867 # text = In contrast, a mutant of Tax termed M22, which does not induce NF-kappaB, fails to activate either IKKalpha or IKKbeta. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Tax tax PROPN NNP Number=Sing _ _ _ _ 8 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 M22 m22 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 either either CCONJ CC _ _ _ _ _ 23 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1868 # text = Furthermore, endogenous IKK enzymatic activity was significantly elevated in HTLV-1-infected and Tax-expressing T-cell lines. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 IKK IKK PROPN NNP Number=Sing _ _ _ _ 5 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1869 # text = Transfection of kinase-deficient mutants of IKKalpha and IKKbeta into either human Jurkat T or 293 cells also inhibits NF-kappaB-dependent reporter gene expression induced by Tax. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 either either DET DT _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 293 293 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 Tax Tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1870 # text = Similarly, a kinase-deficient mutant of NIK (NF-kappaB-inducing kinase), which represents an upstream kinase in the TNF-alpha and IL-1 signaling pathways leading to IKKalpha and IKKbeta activation, blocks Tax induction of NF-kappaB. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 7 mutant mutant NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NIK NIK PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inducing induce ADJ JJ Degree=Pos _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 signaling signaling NOUN NN Number=Sing _ _ _ _ 34 pathways pathway NOUN NNS Number=Plur _ _ _ _ 35 leading lead VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 blocks block NOUN NNS Number=Plur _ _ _ _ 43 Tax tax NOUN NN Number=Sing _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1871 # text = However, plasma membrane-proximal elements in these proinflammatory cytokine pathways are apparently not involved since dominant negative mutants of the TRAF2 and TRAF6 adaptors, which effectively block signaling through the cytoplasmic tails of the TNF-alpha and IL-1 receptors, respectively, do not inhibit Tax induction of NF-kappaB. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 plasma plasma NOUN NN Number=Sing _ _ _ _ 4 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 apparently apparently ADV RB _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ _ 17 since since SCONJ IN _ _ _ _ _ 18 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 mutants mutant NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 TRAF2 TRAF2 NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 26 adaptors adaptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 effectively effectively ADV RB _ _ _ _ _ 30 block block VERB VB VerbForm=Inf _ _ _ _ 31 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 35 tails tail NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 do do AUX VB Mood=Imp|VerbForm=Fin _ _ _ _ 50 not not PART RB _ _ _ _ _ 51 inhibit inhibit VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 52 Tax tax NOUN NN Number=Sing _ _ _ _ 53 induction induction NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1872 # text = Together, these studies demonstrate that HTLV-1 Tax exploits a distal part of the proinflammatory cytokine signaling cascade leading to induction of NF-kappaB. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 Tax Tax NOUN NN Number=Sing _ _ _ _ 11 exploits exploit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 distal distal ADJ JJ Degree=Pos _ _ _ _ 14 part part NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 signaling signale NOUN NN Number=Sing _ _ _ _ 20 cascade cascade NOUN NN Number=Sing _ _ _ _ 21 leading lead VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1873 # text = The pathological alteration of this cytokine pathway leading to NF-kappaB activation by Tax may play a central role in HTLV-1-mediated transformation of human T cells, clinically manifested as the adult T-cell leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 3 alteration alteration NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 leading lead VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Tax tax PROPN NNP Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 play play VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 central central ADJ JJ Degree=Pos _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 clinically clinically ADV RB _ _ _ _ _ 34 manifested manifest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 adult adult NOUN NN Number=Sing _ _ _ _ 38 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1874 # text = Document 00300184 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300184 00300184 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1875 # text = Transcriptional analysis of Epstein-Barr virus gene expression in EBV-positive gastric carcinoma: unique viral latency in the tumour cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Barr Barr PROPN NNP Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 positive positive ADJ JJ Degree=Pos _ _ _ _ 14 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 15 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 unique unique ADJ JJ Degree=Pos _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 latency latency NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tumour tumour NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1876 # text = Although case-oriented evidence for an association of Epstein-Barr virus (EBV) with gastric carcinoma has been accumulating recently, the interaction(s) between EBV and gastric epithelial cells is/are largely unknown. 1 Although although SCONJ IN _ _ _ _ _ 2 case case NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 oriented oriented ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 19 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 accumulating accumulate VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 23 recently recently ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 s s X AFX _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 EBV EBV PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 34 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 largely largely ADV RB _ _ _ _ _ 40 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1877 # text = In this study, we examined seven EBV-positive gastric carcinoma tissues for viral gene expression at the mRNA level, from which studies on the EBV oncogenicity in human epithelial cells will benefit. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 seven seven NUM CD NumType=Card _ _ _ _ 8 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 12 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 13 tissues tissue NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 EBV EBV PROPN NNP Number=Sing _ _ _ _ 29 oncogenicity oncogenicity NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 will will AUX MD VerbForm=Fin _ _ _ _ 35 benefit benefit VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1878 # text = Reverse transcription-PCR analysis showed that all seven EBV-positive tumour tissues constitutively expressed EBV nuclear antigen (EBNA) 1 mRNA, but not EBNA2 mRNA. 1 Reverse reverse NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 PCR Pcr NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 seven seven ADJ JJ Degree=Pos _ _ _ _ 10 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 tumour tumour NOUN NN Number=Sing _ _ _ _ 14 tissues tissue NOUN NNS Number=Plur _ _ _ _ 15 constitutively constitutively ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 EBV EBV PROPN NNP Number=Sing _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 antigen antigen NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ _ 29 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1879 # text = The EBNA transcription was initiated from one of three EBNA promoters, Qp: by contrast, both Cp and Wp were silent, thus resulting in the lack of EBNA2 mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Qp Qp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 Cp cp PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Wp Wp PROPN NNP Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 silent silent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 resulting result VERB VBG VerbForm=Ger _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lack lack NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ _ 32 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1880 # text = Latent membrane protein (LMP) 2A mRNA was detected in three of seven cases; however, neither LMP1 nor LMP2B mRNA was detected in any of the tumours tested. 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 three three NUM CD NumType=Card _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 seven seven NUM CD NumType=Card _ _ _ _ 16 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 however however ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 neither neither CCONJ CC _ _ _ _ _ 21 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 LMP2 LMP2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 B b NOUN NN Number=Sing _ _ _ _ 25 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 any any DET DT _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 tumours tumour NOUN NNS Number=Plur _ _ _ _ 33 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1881 # text = Transcripts from the BamHI-A region of the viral genome were detectable in all cases. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BamHI BamHI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 genome genome NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1882 # text = BZLF1 mRNA and the product, an immediate-early gene for EBV replication, was not expressed in any of them, thereby suggesting that the tumour cells carried EBV genomes in a tightly latent form. 1 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 any any DET DT _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 thereby thereby ADV RB _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tumour tumour NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 EBV EBV PROPN NNP Number=Sing _ _ _ _ 32 genomes genome NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 tightly tightly ADV RB _ _ _ _ _ 36 latent latent ADJ JJ Degree=Pos _ _ _ _ 37 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1883 # text = These findings further extended our previous data regarding EBV latency in gastric carcinoma cells at the protein level, and have affirmed that the programme of viral gene expression in the tumour more closely resembles 'latency I' represented by Burkitt's lymphoma than 'latency II' represented by the majority of nasopharyngeal carcinomas. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 data data NOUN NN Number=Sing _ _ _ _ 8 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 latency latency NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 13 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 affirmed affirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 programme programme NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 tumour tumour NOUN NN Number=Sing _ _ _ _ 33 more more ADV RBR _ _ _ _ _ 34 closely closely ADV RB _ _ _ _ _ 35 resembles resemble NOUN NNS Number=Plur _ _ _ _ 36 ' 's PART POS _ _ _ _ SpaceAfter=No 37 latency latency NOUN NN Number=Sing _ _ _ _ 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 39 ' ' PUNCT `` _ _ _ _ _ 40 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 's 's PART POS _ _ _ _ _ 44 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 47 latency latency NOUN NN Number=Sing _ _ _ _ 48 II Ii NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ' ' PUNCT '' _ _ _ _ _ 50 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 majority majority NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 56 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1884 # text = Document 00300185 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300185 00300185 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1885 # text = Differential interaction of nuclear factors with the PRE-I enhancer element of the human IL-4 promoter in different T cell subsets. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1886 # text = The immunomodulatory cytokine IL-4 affects cells of most hemopoietic lineages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 affects affects NOUN NNS Number=Plur _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 most most ADJ JJS Degree=Sup _ _ _ _ 11 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1887 # text = IL-4 is secreted by activated Th2 but not Th1 cells and plays a major role in the immune response by modulating the differentiation of naive Th cells toward the Th2 phenotype. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 Th1 Th1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 naive naive ADJ JJ Degree=Pos _ _ _ _ 28 Th th PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 toward toward ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 Th2 th2 NUM CD NumType=Card _ _ _ _ 33 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1888 # text = We have previously identified an enhancer element, PRE-I, that is essential for the function of the human IL-4 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1889 # text = To investigate the mechanisms responsible for tissue-specific expression of the IL-4 gene, we analyzed nuclear factors binding to the PRE-I site and compared the binding activities of these factors to the IL-4 promoter of Th1 and Th2 cells. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 site site VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 activities activity NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 4 4 NUM CD NumType=Card _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 Th1 Th1 NUM CD NumType=Card _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 Th2 Th2 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1890 # text = We show that PRE-I interacts with PMA- and PMA/ionomycin-inducible, cyclosporin A-sensitive nuclear factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 interacts interact NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 PMA/ionomycin PMA/ionomycin ADP IN _ _ _ _ SpaceAfter=No 13 -inducible -inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 16 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1891 # text = Using anti-C/EBPbeta (NF-IL6), anti-C/EBPdelta (NF-IL6beta), anti-NF-ATc, anti-NF-ATp, anti-Fos, and anti-Jun 1 Using Using PROPN NNP Number=Sing _ _ _ _ 2 anti-C/EBPbeta anti-C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 anti-C/EBPdelta anti-C/EBPdelta PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 anti-NF anti-NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ATc ATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 anti-NF anti-NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 anti-Fos anti-Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 anti-Jun anti-Jun ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1892 # text = Abs we demonstrate that the previously identified PRE-I binding factor POS-1 is composed of different transcription factors in different Th cell subsets. 1 Abs Ab ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 previously previously ADV RB _ _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 Th th PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1893 # text = In the IL-4-producing 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 producing producing NOUN NN Number=Sing _ _ _ _ # sent_id = 1894 # text = Th0-like human Jurkat and mouse EL-4 cells, POS-1 (designated POS-1a) contains NF-IL6beta and Jun. 1 Th0 Th0 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mouse mouse NOUN NN Number=Sing _ _ _ _ 8 EL EL NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 beta beta PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1895 # text = In the mouse Th2 D10 cells and in the human Th2 clones, POS-1 (designated POS-1b) contains NF-IL6beta, Jun, and NF-ATc/p. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 Th2 Th2 NUM CD NumType=Card _ _ _ _ 5 D10 D10 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 IL6 IL6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 ATc/ ATcith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 36 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1896 # text = In contrast, POS-1 was not found in nuclear extracts of human Th1 clones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 Th1 Th1 NUM CD NumType=Card _ _ _ _ 16 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1897 # text = These findings suggest that PRE-I may play a role in the differential regulation of IL-4 gene expression levels. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 differential differential ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1898 # text = Document 00300186 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300186 00300186 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1899 # text = Inhibition of protein phosphatases by okadaic acid induces AP1 in human T cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 AP1 AP1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1900 # text = To examine the role of protein phosphatases in T cell activation, Jurkat cells were treated with okadaic acid, an inhibitor of type 1 and 2A phosphatases, and nuclear extracts were examined for the presence of AP1 as a measure of early T cell activation. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Jurkat Jurkat SCONJ IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 19 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 type type NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 A a NOUN NN Number=Sing _ _ _ _ 29 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 presence presence NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 AP1 AP1 NUM CD NumType=Card _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 measure measure NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 early early ADJ JJ Degree=Pos _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1901 # text = Okadaic acid was found to be a potent inducer of AP1. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potent potent ADJ JJ Degree=Pos _ _ _ _ 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 AP1 AP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1902 # text = In contrast to phorbol esters such as phorbol myristate acetate (PMA), the induction of AP1 by okadaic acid occurs predominantly by transcriptional activation of the jun and fos family of proto-oncogenes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 5 esters ester NOUN NNS Number=Plur _ _ _ _ 6 such such ADJ JJ Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 9 myristate myristate NOUN NN Number=Sing _ _ _ _ 10 acetate acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP1 AP1 NUM CD NumType=Card _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ _ 22 occurs occur NOUN NNS Number=Plur _ _ _ _ 23 predominantly predominantly ADV RB _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 jun jun NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 fos fo NOUN NNS Number=Plur _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 oncogenes oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1903 # text = Surprisingly, while the addition of phytohemagglutinin further enhanced the induction of AP1, the addition of PMA inhibited it. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 addition addition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 8 further further ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 AP1 AP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ _ 19 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1904 # text = Okadaic acid treatment was found to dramatically increase mRNA transcripts of the jun family of proto-oncogenes including c-jun, junD, and junB and to a lesser extent the fos family including c-fos and fra-1. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 dramatically dramatically ADV RB _ _ _ _ _ 8 increase increase VERB VB VerbForm=Inf _ _ _ _ 9 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 10 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 jun jun ADJ JJ Degree=Pos _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 c- c- PUNCT : _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 junD jund NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 junB junB PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 30 extent extent NOUN NN Number=Sing _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 fos fo NOUN NNS Number=Plur _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 including include VERB VBG VerbForm=Ger _ _ _ _ 35 c- c- PUNCT : _ _ _ _ SpaceAfter=No 36 fos fo NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 fra fra NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1905 # text = By comparison, PMA is a very inefficient inducer of the jun gene family in Jurkat cells. 1 By by ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 inefficient inefficient ADJ JJ Degree=Pos _ _ _ _ 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 jun jun ADJ JJ Degree=Pos _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1906 # text = Similar to its effect on the induction of AP1 by okadaic acid, PMA inhibits the induction of c-jun mRNA by okadaic acid. 1 Similar similar VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be PART POS _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 AP1 AP1 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 PMA PMA PROPN NNP Number=Sing _ _ _ _ 16 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 25 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1907 # text = Transfection of c-jun promoter constructs confirmed the marked difference between PMA and okadaic acid in inducing c-jun transcription. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 difference difference NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1908 # text = The induction of AP1 by okadaic acid suggests that protein phosphatases 1 and 2A (PP1 and PP2A) may be involved in T cell activation as important negative regulators of the transcription factor AP1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP1 AP1 NUM CD NumType=Card _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 A a NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PP1 PP1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PP2 PP2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 regulators regulator NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 AP1 Ap1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1909 # text = Document 00300187 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300187 00300187 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1910 # text = Molecular mechanisms of anoxia/reoxygenation-induced neutrophil adherence to cultured endothelial cells. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anoxia anoxia ADP IN _ _ _ _ SpaceAfter=No 5 /reoxygenation-induced /reoxygenation-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 7 adherence adherence NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1911 # text = The objectives of this study were to (1) determine the time course of neutrophil adhesion to monolayers of human umbilical vein endothelial cells (HUVECs) that were exposed to 60 minutes of anoxia followed by 30 to 600 minutes of reoxygenation and (2) define the mechanisms responsible for both the early (minutes) and late (hours) hyperadhesivity of postanoxic HUVECs to human neutrophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 objectives objective NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 determine determine VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ _ 14 course course NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 23 vein vein NOUN NN Number=Sing _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 60 60 NUM CD NumType=Card _ _ _ _ 34 minutes minute NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 anoxia anoxia NOUN NN Number=Sing _ _ _ _ 37 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 30 30 NUM CD NumType=Card _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 600 600 NUM CD NumType=Card _ _ _ _ 42 minutes minute NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 2 2 X LS _ _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 define define VERB VB VerbForm=Inf _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 52 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 53 for for ADP IN _ _ _ _ _ 54 both both CCONJ CC _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 early early ADJ JJ Degree=Pos _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 late late ADJ JJ Degree=Pos _ _ _ _ 62 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 63 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 hyperadhesivity hyperadhesivity NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 postanoxic postanoxic ADJ JJ Degree=Pos _ _ _ _ 68 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 69 to to ADP IN _ _ _ _ _ 70 human human ADJ JJ Degree=Pos _ _ _ _ 71 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 1912 # text = The results clearly demonstrate that anoxia/reoxygenation (A/R) leads to a biphasic increase in neutrophil adhesion to HUVECs, with peak responses occurring at 30 minutes (phase 1) and 240 minutes (phase 2) after reoxygenation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 clearly clearly ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 anoxia/ anoxia/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 A/ A/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 10 R r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 peak peak NOUN NN Number=Sing _ _ _ _ 25 responses respons NOUN NNS Number=Plur _ _ _ _ 26 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 30 30 NUM CD NumType=Card _ _ _ _ 29 minutes minute NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 phase phase NOUN NN Number=Sing _ _ _ _ 32 1 1 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 240 240 NUM CD NumType=Card _ _ _ _ 36 minutes minute NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 phase phase NOUN NN Number=Sing _ _ _ _ 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 after after ADP IN _ _ _ _ _ 42 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1913 # text = Oxypurinol and catalase inhibited phase-1 adhesion, suggesting a role for xanthine oxidase and H2O2. 1 Oxypurinol Oxypurinol PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 catalase catalase VERB VB VerbForm=Inf _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 xanthine xanthine NOUN NN Number=Sing _ _ _ _ 15 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1914 # text = In comparison, platelet activating factor (PAF) contributed to both phases of neutrophil adhesion. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 platelet platelet VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 activating activating VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 contributed contribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 phases phasis NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1915 # text = Anti-intercellular adhesion molecule-1 (ICAM-1) and anti-P-selectin antibodies (monoclonal antibodies [mAbs]) attenuated phase-1 neutrophil adhesion, consistent with roles for constitutively expressed ICAM-1 and enhanced surface expression of preformed P-selectin. 1 Anti-intercellular Anti-intercellular ADJ JJ Degree=Pos _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 anti-P- anti-P- X GW _ _ _ _ SpaceAfter=No 13 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 17 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 18 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 mAbs mAbs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 roles role NOUN NNS Number=Plur _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 constitutively constitutively ADV RB _ _ _ _ _ 34 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 surface surface NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1916 # text = Phase-2 neutrophil adhesion was attenuated by an anti-E-selectin mAb, indicating a dominant role of this adhesion molecule in the late phase response. 1 Phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 anti-E- anti-E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 selectin selectin NOUN NN Number=Sing _ _ _ _ 12 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 late late ADJ JJ Degree=Pos _ _ _ _ 25 phase phase NOUN NN Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1917 # text = Pretreatment with actinomycin D and cycloheximide or with competing ds-oligonucleotides containing the nuclear factor-kappa B or activator protein-1 cognate DNA sequences significantly attenuated phase-2 response, suggesting a role for de novo macromolecule synthesis. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 4 D d NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 with with SCONJ IN _ _ _ _ _ 9 competing compete VERB VBG VerbForm=Ger _ _ _ _ 10 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 -oligonucleotides -oligonucleotides SCONJ IN _ _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 cognate cognate NOUN NN Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 significantly significantly ADV RB _ _ _ _ _ 28 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 de de PROPN NNP Number=Sing _ _ _ _ 39 novo novo ADV RB _ _ _ _ _ 40 macromolecule macromolecule ADJ JJ Degree=Pos _ _ _ _ 41 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1918 # text = Surface expression of ICAM-1, P-selectin, and E-selectin on HUVECs correlated with the phase-1 and -2 neutrophil adhesion responses. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 selectin selectin NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 16 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1919 # text = Collectively, these findings indicate that A/R elicits a two-phase neutrophil-endothelial cell adhesion response that involves transcription-independent and transcription-dependent surface expression of different endothelial cell adhesion molecules. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 8 /R /r NOUN NN Number=Sing _ _ _ _ 9 elicits elicit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 phase phase NOUN NN Number=Sing _ _ _ _ 14 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1920 # text = Document 00300188 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300188 00300188 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1921 # text = Costimulation of human CD4+ T cells with LFA-3 and B7 induce distinct effects on AP-1 and NF-kappa B transcription factors. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 B7 B7 NUM CD NumType=Card _ _ _ _ 14 induce induce NOUN NN Number=Sing _ _ _ _ 15 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1922 # text = We have earlier shown that stimulation of human CD4+ T cells with SEA presented on Chinese hamster ovary (CHO)-DR transfectants coexpressing either B7 or LFA-3 resulted in distinct cytokine profiles. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 earlier earlier ADV RB _ _ _ _ _ 4 shown shown VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 SEA SEa NOUN NN Number=Sing _ _ _ _ 15 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 18 hamster hamster NOUN NN Number=Sing _ _ _ _ 19 ovary ovary NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 DR dr NOUN NN Number=Sing _ _ _ _ 25 transfectants transfectant NOUN NNS Number=Plur _ _ _ _ 26 coexpressing coexpresse VERB VBG VerbForm=Ger _ _ _ _ 27 either either CCONJ CC _ _ _ _ _ 28 B7 B7 NUM CD NumType=Card _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 3 3 NUM CD NumType=Card _ _ _ _ 33 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 36 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 37 profiles profile NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1923 # text = We now demonstrate that B7, but not LFA-3, strongly costimulated IL-2 transcription and mRNA expression in CD4+ T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 LFA LFA ADV RB _ _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ _ 25 T t NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1924 # text = Maximal increase in IL-2 transcription was recorded with CHO-DR/B7/LFA-3, suggesting a cooperative effect of B7 and LFA-3 at the transcriptional level. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 recorded record VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 CHO Cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DR/B7/LFA DR/B7/LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 B7 B7 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 LFA LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1925 # text = Gel-shift analysis demonstrated that stimulation of CD4+ T cells with CHO-DR and staphylococcal enterotoxin 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CHO Cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DR dr PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 19 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ # sent_id = 1926 # text = A was sufficient to induce significant amounts of NF-kappa B binding proteins, whereas induction of AP-1 binding proteins required costimulation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 amounts amount NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1927 # text = LFA-3 induced moderate levels of AP-1, but did not influence the levels of NF-kappa B, while B7 costimulation strongly induced both AP-1 and substantially enhanced NF-kappa B binding proteins. 1 LFA Lfa INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 influence influence VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 B7 B7 NUM CD NumType=Card _ _ _ _ 26 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 27 strongly strongly ADV RB _ _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 substantially substantially ADV RB _ _ _ _ _ 35 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1928 # text = The CHO-DR/B7/LFA-3 triple transfectant induced a further increase in AP-1 and NF-kappa B binding proteins compared with the double transfectants. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CHO Cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DR/B7/LFA DR/B7/LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 triple triple NOUN NN Number=Sing _ _ _ _ 8 transfectant transfectant NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 further further ADJ JJ Degree=Pos _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 double double ADJ JJ Degree=Pos _ _ _ _ 28 transfectants transfectant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1929 # text = The level of Oct-1 binding proteins remained similar in all samples. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 all all DET DT _ _ _ _ _ 13 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1930 # text = Super-shift analysis revealed that the NF-kappa B complex of costimulated CD4+ T cells contained large amounts of p50, substantial amounts of p65, and marginal levels of c-Rel proteins. 1 Super super ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 shift shift ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 T t NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 contained containe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 large large ADJ JJ Degree=Pos _ _ _ _ 21 amounts amount NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 26 amounts amount NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 marginal marginal ADJ JJ Degree=Pos _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Rel Rel NOUN NN Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1931 # text = The AP-1 binding proteins contained c-Jun, Jun-D, and Fra-1, but marginal amounts of Jun-B and c-Fos. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -D -D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Fra Fra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 marginal marginal ADJ JJ Degree=Pos _ _ _ _ 21 amounts amount NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B B PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1932 # text = Our results indicate distinct effects of B7 and LFA-3 costimulation on the activity of AP-1 and NF-kappa B. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 B7 B7 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1933 # text = These may partly account for the differential effects of B7 and LFA-3 costimulation on IL-2 expression. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 partly partly ADV RB _ _ _ _ _ 4 account account VERB VB VerbForm=Inf _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 differential differential ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 B7 B7 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1934 # text = Document 00300189 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300189 00300189 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1935 # text = Blockade of T-cell activation by dithiocarbamates involves novel mechanisms of inhibition of nuclear factor of activated T cells. 1 Blockade Blockade NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 dithiocarbamates dithiocarbamate NOUN NNS Number=Plur _ _ _ _ 8 involves involf NOUN NNS Number=Plur _ _ _ _ 9 novel novel VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1936 # text = Dithiocarbamates (DTCs) have recently been reported as powerful inhibitors of NF-kappaB activation in a number of cell types. 1 Dithiocarbamates Dithiocarbamates PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 DTCs Dtcs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 recently recently ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 number number NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1937 # text = Given the role of this transcription factor in the regulation of gene expression in the inflammatory response, NF-kappaB inhibitors have been suggested as potential therapeutic drugs for inflammatory diseases. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 gene gene ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 23 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 potential potential ADJ JJ Degree=Pos _ _ _ _ 28 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 29 drugs drug NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 32 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1938 # text = We show here that DTCs inhibited both interleukin 2 (IL-2) synthesis and membrane expression of antigens which are induced during T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DTCs Dtcs PROPN NNP Number=Sing _ _ _ _ 6 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1939 # text = This inhibition, which occurred with a parallel activation of c-Jun transactivating functions and expression, was reflected by transfection experiments at the IL-2 promoter level, and involved not only the inhibition of NF-kappaB-driven reporter activation but also that of nuclear factor of activated T cells (NFAT). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ _ 14 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 experiments experiment NOUN NNS Number=Plur _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 involved involved ADJ JJ Degree=Pos _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 only only ADV RB _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 reporter reporter NOUN NN Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 but but CCONJ CC _ _ _ _ _ 47 also also ADV RB _ _ _ _ _ 48 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 1940 # text = Accordingly, electrophoretic mobility shift assays (EMSAs) indicated that pyrrolidine DTC (PDTC) prevented NF-kappaB, and NFAT DNA-binding activity in T cells stimulated with either phorbol myristate acetate plus ionophore or antibodies against the CD3-T-cell receptor complex and simultaneously activated the binding of AP-1. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 pyrrolidine pyrrolidine PROPN NNP Number=Sing _ _ _ _ 13 DTC DTC PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 either either DET DT _ _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 plus plus CCONJ CC _ _ _ _ _ 38 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 41 against against ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 CD3-T Cd3-t NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ _ 47 complex complex NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 simultaneously simultaneously ADV RB _ _ _ _ _ 50 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 binding binding NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1941 # text = Furthermore, PDTC differentially targeted both NFATp and NFATc family members, inhibiting the transactivation functions of NFATp and mRNA induction of NFATc. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 4 differentially differentially ADV RB _ _ _ _ _ 5 targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1942 # text = Strikingly, Western blotting and immunocytochemical experiments indicated that PDTC promoted a transient and rapid shuttling of NFATp and NFATc, leading to their accelerated export from the nucleus of activated T cells. 1 Strikingly strikingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Western western ADJ JJ Degree=Pos _ _ _ _ 4 blotting blotting NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 immunocytochemical immunocytochemical ADJ JJ Degree=Pos _ _ _ _ 7 experiments experiment NOUN NNS Number=Plur _ _ _ _ 8 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 11 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 shuttling shuttling NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 accelerated accelerated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 export export NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1943 # text = We propose that the activation of an NFAT kinase by PDTC could be responsible for the rapid shuttling of the NFAT, therefore transiently converting the sustained transactivation of this transcription factor that occurs during lymphocyte activation, and show that c-Jun NH2-terminal kinase (JNK) can act by directly phosphorylating NFATp. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 PDTC Pdtc PROPN NNP Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 shuttling shuttling NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 therefore therefore ADV RB _ _ _ _ _ 24 transiently transiently ADV RB _ _ _ _ _ 25 converting converte VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 during during ADP IN _ _ _ _ _ 36 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 c- c- SYM NFP _ _ _ _ SpaceAfter=No 43 Jun Jun PROPN NNP Number=Sing _ _ _ _ 44 NH2 Nh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 terminal terminal NOUN NN Number=Sing _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 can can AUX MD VerbForm=Fin _ _ _ _ 52 act act VERB VB VerbForm=Inf _ _ _ _ 53 by by SCONJ IN _ _ _ _ _ 54 directly directly ADV RB _ _ _ _ _ 55 phosphorylating phosphorylat VERB VBG VerbForm=Ger _ _ _ _ 56 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1944 # text = In addition, the combined inhibitory effects on NFAT and NF-KB support a potential use of DTCs as immunosuppressants. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 KB KB PROPN NNP Number=Sing _ _ _ _ 14 support support NOUN NN Number=Sing _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 potential potential ADJ JJ Degree=Pos _ _ _ _ 17 use use NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 DTCs DTC NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1945 # text = Document 00300190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300190 00300190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1946 # text = Activation of human macrophages by mechanical ventilation in vitro. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 7 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1947 # text = Positive-pressure mechanical ventilation supports gas exchange in patients with respiratory failure but is also responsible for significant lung injury. 1 Positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 pressure pressure NOUN NN Number=Sing _ _ _ _ 4 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 5 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 6 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gas gas NOUN NN Number=Sing _ _ _ _ 8 exchange exchange NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 13 failure failure NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 significant significant ADJ JJ Degree=Pos _ _ _ _ 20 lung lung NOUN NN Number=Sing _ _ _ _ 21 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1948 # text = In this study, we have developed an in vitro model in which isolated lung cells can be submitted to a prolonged cyclic pressure-stretching strain resembling that of conventional mechanical ventilation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lung lung NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 submitted submit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cyclic cyclic NOUN NN Number=Sing _ _ _ _ 24 pressure pressure NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stretching stretching VERB VBG VerbForm=Ger _ _ _ _ 27 strain strain NOUN NN Number=Sing _ _ _ _ 28 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 32 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 33 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1949 # text = In this model, cells cultured on a Silastic membrane were elongated up to 7% of their initial diameter, corresponding to a 12% increase in cell surface. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Silastic Silastic ADJ JJ Degree=Pos _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 elongated elongate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 up up ADP RP _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 initial initial ADJ JJ Degree=Pos _ _ _ _ 20 diameter diameter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1950 # text = The lung macrophage was identified as the main cellular source for critical inflammatory mediators such as tumor necrosis factor-alpha, the chemokines interleukin (IL)-8 and -6, and matrix metalloproteinase-9 in this model system of mechanical ventilation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lung lung NOUN NN Number=Sing _ _ _ _ 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 main main ADJ JJ Degree=Pos _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 source source NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 critical critical ADJ JJ Degree=Pos _ _ _ _ 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 mediators mediator NOUN NNS Number=Plur _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 25 interleukin interleukin ADV RB _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 8 8 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 matrix matrix NUM CD NumType=Card _ _ _ _ 37 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 9 9 NUM CD NumType=Card _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 model model NOUN NN Number=Sing _ _ _ _ 43 system system NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 46 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1951 # text = These mediators were measured in supernatants from ventilated alveolar macrophages, monocyte-derived macrophages, and promonocytic THP-1 cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mediators mediator NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 ventilated ventilate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 19 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1952 # text = Nuclear factor-kappaB was found to be activated in ventilated macrophages. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ventilated ventilate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1953 # text = Synergistic proinflammatory effects of mechanical stress and molecules such as bacterial endotoxin were observed, suggesting that mechanical ventilation might be particularly deleterious in preinjured or infected lungs. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 6 stress stress NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 19 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 20 might might AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 particularly particularly ADV RB _ _ _ _ _ 23 deleterious deleterious ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 preinjured preinjure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lungs lung NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1954 # text = Dexamethasone prevented IL-8 and tumor necrosis factor-alpha secretion in ventilated macrophages. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 ventilated ventilate ADJ JJ Degree=Pos _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1955 # text = Mechanical ventilation induced low levels of IL-8 secretion by alveolar type II-like cells. 1 Mechanical Mechanical ADJ JJ Degree=Pos _ _ _ _ 2 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 secretion secretion NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1956 # text = Other lung cell types such as endothelial cells, bronchial cells, and fibroblasts failed to produce IL-8 in response to a prolonged cyclic pressure-stretching load. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 lung lung NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 produce produce VERB VB VerbForm=Inf _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cyclic cyclic NOUN NN Number=Sing _ _ _ _ 27 pressure pressure NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 stretching stretching VERB VBG VerbForm=Ger _ _ _ _ 30 load load NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1957 # text = This model is of particular value for exploring physical stress-induced signaling pathways, as well as for testing the effects of novel ventilatory strategies or adjunctive substances aimed at modulating cell activation induced by mechanical ventilation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 model model NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 particular particular ADJ JJ Degree=Pos _ _ _ _ 6 value value NOUN NN Number=Sing _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 exploring explore VERB VBG VerbForm=Ger _ _ _ _ 9 physical physical ADJ JJ Degree=Pos _ _ _ _ 10 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 for for SCONJ IN _ _ _ _ _ 19 testing test VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 novel novel NOUN NN Number=Sing _ _ _ _ 24 ventilatory ventilatory NOUN NN Number=Sing _ _ _ _ 25 strategies strategy NOUN NNS Number=Plur _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 adjunctive adjunctive ADJ JJ Degree=Pos _ _ _ _ 28 substances substance NOUN NNS Number=Plur _ _ _ _ 29 aimed aim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 at at SCONJ IN _ _ _ _ _ 31 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 37 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1958 # text = Document 00300191 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300191 00300191 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1959 # text = Temporal control of IgH gene expression in developing B cells by the 3' locus control region. 1 Temporal Temporal ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IgH Igh DET DT _ _ _ _ _ 5 gene gene ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 developing develop VERB VBG VerbForm=Ger _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 locus locus NOUN NN Number=Sing _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1960 # text = The suggested roles of the downstream 3' regions acting as a Locus Control Region (LCR), have allowed comparisons to be made between the regulation of the IgH locus with other model systems whose gene expression is governed by LCR activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 roles role NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT '' _ _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 acting act VERB VBG VerbForm=Ger _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Locus Locus PROPN NNP Number=Sing _ _ _ _ 14 Control Control PROPN NNP Number=Sing _ _ _ _ 15 Region region PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LCR LCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 comparisons comparison NOUN NNS Number=Plur _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IgH Igh PROPN NNP Number=Sing _ _ _ _ 32 locus locus NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 model model NOUN NN Number=Sing _ _ _ _ 36 systems system NOUN NNS Number=Plur _ _ _ _ 37 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 38 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 governed govern VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 LCR Lcr ADJ JJR Degree=Cmp _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1961 # text = Here we summarize the importance of the IgH 3'LCR and its putative functional role in IgH gene expression and compare it with the 5'LCR regulatory region of the human beta-globin locus. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 importance importance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IgH IgH PROPN NNP Number=Sing _ _ _ _ 9 3' 3's PART POS _ _ _ _ SpaceAfter=No 10 LCR LCR PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 putative putative ADJ JJ Degree=Pos _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 compare compare VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 5' 5' NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 LCR Lcr ADP IN _ _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 region region NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 globin globin NOUN NN Number=Sing _ _ _ _ 35 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1962 # text = Document 00300192 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300192 00300192 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1963 # text = Transcriptional regulation of interleukin 3 (IL3) in primary human T lymphocytes. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL3 IL3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t NOUN NN Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1964 # text = Role of AP-1- and octamer-binding proteins in control of IL3 gene expression. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL3 IL3 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1965 # text = We have investigated the molecular and biochemical basis for activation of interleukin 3 (IL3) gene expression in primary human T lymphocytes following CD3 and CD2 receptor stimulation or activation by phytohemagglutinin plus phorbol 12-myristate 13-acetate. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 8 basis basis NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL3 IL3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 primary primary ADJ JJ Degree=Pos _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T t NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 CD3 CD3 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CD2 CD2 NUM CD NumType=Card _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 34 plus plus CCONJ CC _ _ _ _ _ 35 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 36 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT : _ _ _ _ SpaceAfter=No 38 myristate myristate NOUN NN Number=Sing _ _ _ _ 39 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1966 # text = Using transfection and reporter gene assays specifically designed for primary T lymphocytes in conjunction with gel retardation assays, Western blot analyses and UV cross-linking studies, we found that c-Jun, c-Fos, and octamer-binding proteins play a major role in transcriptional activation of the IL3 gene via their interaction with two specific regions contained within the IL3 5'-flanking sequence. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 designed design VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 gel gel NOUN NN Number=Sing _ _ _ _ 17 retardation retardation NOUN NN Number=Sing _ _ _ _ 18 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 Western western ADJ JJ Degree=Pos _ _ _ _ 21 blot blot NOUN NN Number=Sing _ _ _ _ 22 analyses analyse NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 UV UV NOUN NN Number=Sing _ _ _ _ 25 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 27 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 c- c- SYM NFP _ _ _ _ SpaceAfter=No 36 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 binding bind VERB VBG VerbForm=Ger _ _ _ _ 42 proteins protein NOUN NNS Number=Plur _ _ _ _ 43 play play VERB VB VerbForm=Inf _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 major major ADJ JJ Degree=Pos _ _ _ _ 46 role role NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 53 gene gene NOUN NN Number=Sing _ _ _ _ 54 via via ADP IN _ _ _ _ _ 55 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 interaction interaction NOUN NN Number=Sing _ _ _ _ 57 with with ADP IN _ _ _ _ _ 58 two two NUM CD NumType=Card _ _ _ _ 59 specific specific ADJ JJ Degree=Pos _ _ _ _ 60 regions region NOUN NNS Number=Plur _ _ _ _ 61 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 within within ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 65 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 67 - - PUNCT , _ _ _ _ SpaceAfter=No 68 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 69 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 1967 # text = Additionally, the region between bases -107 and -59 of the IL3 promoter containing putative AP-2 and Sp1 binding motifs appears necessary for basal level expression of the IL3 gene. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 bases bas NOUN NNS Number=Plur _ _ _ _ 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 107 107 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 59 59 NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 putative putative ADJ JJ Degree=Pos _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 motifs motif NOUN NNS Number=Plur _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 basal basal ADJ JJ Degree=Pos _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL3 IL3 NUM CD NumType=Card _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1968 # text = The data also indicate that CD2 receptor activation and phytohemagglutinin plus phorbol 12-myristate 13-acetate stimulation augment T cell IL3 gene expression through the same cis- and trans-activating signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 CD2 Cd2 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 11 plus plus CCONJ CC _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 acetate acetate NOUN NN Number=Sing _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 augment augment NOUN NN Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 IL3 IL3 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 same same ADJ JJ Degree=Pos _ _ _ _ 29 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 activating activat VERB VBG VerbForm=Ger _ _ _ _ 35 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1969 # text = These results should contribute to a better understanding of the regulation of IL3 gene expression in human T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 should should AUX MD VerbForm=Fin _ _ _ _ 4 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 better better ADJ JJR Degree=Cmp _ _ _ _ 8 understanding understanding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL3 IL3 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1970 # text = Document 00300193 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300193 00300193 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1971 # text = Tcf-1-mediated transcription in T lymphocytes: differential role for glycogen synthase kinase-3 in fibroblasts and T cells. 1 Tcf Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 differential differential ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 glycogen glycogen ADJ JJ Degree=Pos _ _ _ _ 15 synthase synthase NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1972 # text = Beta-catenin is the vertebrate homolog of the Drosophila segment polarity gene Armadillo and plays roles in both cell-cell adhesion and transduction of the Wnt signaling cascade. 1 Beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 catenin catenin NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 7 homolog homolog NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 polarity polarity NOUN NN Number=Sing _ _ _ _ 13 gene gene PROPN NNP Number=Sing _ _ _ _ 14 Armadillo Armadillo PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 roles role NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 transduction transduction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Wnt Wnt PROPN NNP Number=Sing _ _ _ _ 29 signaling signaling NOUN NN Number=Sing _ _ _ _ 30 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1973 # text = Recently, members of the Lef/Tcf transcription factor family have been identified as protein partners of beta-catenin, explaining how beta-catenin alters gene expression. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 members member NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Lef Lef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 Tcf Tcf PROPN NNP Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 partners partner NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 explaining explain VERB VBG VerbForm=Ger _ _ _ _ 24 how how ADV WRB PronType=Int _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 catenin catenin NOUN NN Number=Sing _ _ _ _ 28 alters alter NOUN NNS Number=Plur _ _ _ _ 29 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1974 # text = Here we report that in T cells, Tcf-1 also becomes transcriptionally active through interaction with beta-catenin, suggesting that the Wnt signal transduction pathway is operational in T lymphocytes as well. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 transcriptionally transcriptionally ADV RB _ _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 27 signal signal NOUN NN Number=Sing _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 operational operational ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1975 # text = However, although Wnt signals are known to inhibit the activity of the negative regulatory protein kinase glycogen synthase kinase-3beta (GSK-3beta), resulting in increased levels of beta-catenin, we find no evidence for involvement of GSK-3beta in Tcf-mediated transcription in T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 glycogen glycogen NOUN NN Number=Sing _ _ _ _ 19 synthase synthase NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GSK Gsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 beta- beta- SYM NFP _ _ _ _ SpaceAfter=No 37 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 no no DET DT _ _ _ _ _ 42 evidence evidence NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 involvement involvement NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 beta beta NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 T t PROPN NNP Number=Sing _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 1976 # text = That is, a dominant negative GSK-3beta does not specifically activate 1 That that PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 GSK Gsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 activate activate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 1977 # text = Tcf transcription and stimuli (lithium or phytohemagglutinin) that inhibit GSK-3beta activity also do not activate 1 Tcf Tcf NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 lithium lithium NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 1978 # text = Tcf reporter genes. 1 Tcf Tcf ADJ JJ Degree=Pos _ _ _ _ 2 reporter reporter NOUN NN Number=Sing _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 1979 # text = Thus, inhibition of GSK-3beta is insufficient to activate Tcf-dependent transcription in T lymphocytes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 Tcf Tcf ADV RB _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1980 # text = In contrast, in C57MG fibroblast cells, lithium inactivates GSK-3beta and induces Tcf-controlled transcription. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 C57MG C57MG ADJ JJ Degree=Pos _ _ _ _ 6 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 lithium lithium NOUN NN Number=Sing _ _ _ _ 10 inactivates inactivate NOUN NNS Number=Plur _ _ _ _ 11 GSK GSK NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 induces induce NOUN NNS Number=Plur _ _ _ _ 17 Tcf- Tcf- PUNCT : _ _ _ _ SpaceAfter=No 18 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1981 # text = This is the first demonstration that lithium can alter gene expression of Tcf-responsive genes, and points to a difference in regulation of Wnt signaling between fibroblasts and lymphocytes. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 lithium lithium NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 alter alter ADV RB _ _ _ _ _ 10 gene gene VERB VB VerbForm=Inf _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 points point NOUN NNS Number=Plur _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 difference difference NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 27 signaling signaling NOUN NN Number=Sing _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1982 # text = Document 00300194 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300194 00300194 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1983 # text = Identification of a novel factor that interacts with an immunoglobulin heavy-chain promoter and stimulates transcription in conjunction with the lymphoid cell-specific factor OTF2. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 11 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 OTF2 Otf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1984 # text = The tissue-specific expression of the MOPC 141 immunoglobulin heavy-chain gene was studied by using in vitro transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 MOPC Mopc PROPN NNPS Number=Plur _ _ _ _ 9 141 141 NUM CD NumType=Card _ _ _ _ 10 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 11 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1985 # text = B-cell-specific transcription of this gene was dependent on the octamer element 5'-ATGCAAAG-3', located in the upstream region of this promoter and in the promoters of all other immunoglobulin heavy- and light-chain genes. 1 B- B- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 octamer octamer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 ATGCAAAG ATGCAAAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 promoters promoter NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 all all DET DT _ _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 39 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 chain chain NOUN NN Number=Sing _ _ _ _ 45 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1986 # text = The interaction of purified octamer transcription factors 1 and 2 (OTF1 and OTF2) with the MOPC 141 promoter was studied by using electrophoretic mobility shift assays and DNase I footprinting. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 octamer octamer NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OTF1 Otf1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 OTF2 Otf2 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 MOPC Mopc NOUN NN Number=Sing _ _ _ _ 19 141 141 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assays assay NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 DNase DNase NOUN NN Number=Sing _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 footprinting footprint VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1987 # text = Purified OTF1 from HeLa cells and OTF1 and OTF2 from B cells bound to identical sequences within the heavy-chain promoter. 1 Purified Purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 OTF1 OTF1 PROPN NNP Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 OTF1 OTF1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 OTF2 OTF2 NUM CD NumType=Card _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 bound bound ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 identical identical ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1988 # text = The OTF interactions we observed extended over the heptamer element 5'-CTCAGGA-3', and it seems likely that the binding of the purified factors involves cooperation between octamer and heptamer sites in this promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 OTF OTF ADJ JJ Degree=Pos _ _ _ _ 3 interactions interaction NOUN NNS Number=Plur _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 extended extend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 over over ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 heptamer heptamer NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 '- '- PUNCT . _ _ _ _ SpaceAfter=No 13 CTCAGGA CTCAGGa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 likely likely ADJ JJ Degree=Pos _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 purified purified ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 octamer octamer NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 heptamer heptamer NOUN NN Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1989 # text = In addition to these elements, we identified a second regulatory element, the N element with the sequence 5'-GGAACCTCCCCC-3'. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N N PROPN NNP Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 22 -GGAACCTCCCCC -ggaacctccccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1990 # text = The N element could independently mediate low levels of transcription in both B-cell and HeLa-cell extracts, and, in conjunction with the octamer element, it can promote high levels of transcription in B-cell extracts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 N n PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 independently independently ADV RB _ _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HeLa HeLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 octamer octamer NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 promote promote VERB VB VerbForm=Inf _ _ _ _ 33 high high ADJ JJ Degree=Pos _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1991 # text = The N element bound a transcription factor, NTF, that is ubiquitous in cell-type distribution, and NTF was distinct from any of the previously described proteins that bind to similar sequences. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 N N PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 bound bound ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NTF NTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 type type NOUN NN Number=Sing _ _ _ _ 18 distribution distribution NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NTF NTF PROPN NNP Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 any any DET DT _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 previously previously ADV RB _ _ _ _ _ 29 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 similar similar ADJ JJ Degree=Pos _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1992 # text = Based on these results, we propose that NTF and OTF2 interactions (both with their cognate DNA elements and possibly at the protein-protein level) may be critical to B-cell-specific expression and that these interactions provide additional pathways for regulating gene expression. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 NTF NTF PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 OTF2 OTF2 NUM CD NumType=Card _ _ _ _ 12 interactions interaction NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 both both CCONJ CC _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 possibly possibly ADV RB _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 B- B- X GW _ _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 40 interactions interaction NOUN NNS Number=Plur _ _ _ _ 41 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 additional additional ADJ JJ Degree=Pos _ _ _ _ 43 pathways pathway NOUN NNS Number=Plur _ _ _ _ 44 for for SCONJ IN _ _ _ _ _ 45 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 46 gene gene ADJ JJ Degree=Pos _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1993 # text = Document 00300195 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300195 00300195 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1994 # text = Fibroblast growth factor-1 (FGF-1) enhances IL-2 production and nuclear translocation of NF-kappaB in FGF receptor-bearing Jurkat T cells. 1 Fibroblast Fibroblast ADJ JJ Degree=Pos _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 FGF FGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 enhances enhance NOUN NNS Number=Plur _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 FGF FGF PROPN NNP Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1995 # text = Fibroblast growth factors (FGFs) are heparin-binding proteins crucial to embryogenesis, angiogenesis, and wound healing. 1 Fibroblast Fibroblast ADJ JJ Degree=Pos _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 FGFs FGF NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 heparin heparin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 embryogenesis embryogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 angiogenesis angiogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 wound wound ADJ JJ Degree=Pos _ _ _ _ 20 healing healing NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1996 # text = FGF-1 is abundantly expressed in the synovium in rheumatoid arthritis and in rejecting allografts, sites of chronic immune-mediated inflammation. 1 FGF Fgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 abundantly abundantly ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 synovium synovium NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 12 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 rejecting reject VERB VBG VerbForm=Ger _ _ _ _ 16 allografts allograft NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 21 immune-mediated immune-mediated ADJ JJ Degree=Pos _ _ _ _ 22 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1997 # text = The frequency of FGF-1-responsive T cells is increased in the peripheral blood of these disorders, and a high percentage of infiltrating T cells in rheumatoid arthritis synovium express receptors for FGF-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 frequency frequency NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 percentage percentage NOUN NN Number=Sing _ _ _ _ 25 of of SCONJ IN _ _ _ _ _ 26 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 31 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 32 synovium synovium NOUN NN Number=Sing _ _ _ _ 33 express express ADJ JJ Degree=Pos _ _ _ _ 34 receptors receptor NOUN NNS Number=Plur _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1998 # text = To understand the action of FGF-1 in T cells, studies were initiated in Jurkat T cells that express the signaling isoform of FGF receptor-1. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 isoform isoform NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 FGF FGF PROPN NNP Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1999 # text = These experiments show that FGF-1 stimulation of Jurkat T cells provides a second signal that augments TCR-mediated IL-2 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 augments augment VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 TCR Tcr ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2000 # text = Analogous to costimulation via CD28, this activity is mediated through activation of Rel/kappaB, a family of transcription factors known to regulate IL-2 and other activation-inducible proteins. 1 Analogous Analogous ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 via via ADP IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 other other ADJ JJ Degree=Pos _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2001 # text = FGF-1 alone induces modest nuclear translocation of kappaB-binding proteins, and this translocation is enhanced by the combination of anti-CD3 and FGF-1. 1 FGF Fgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 alone alone ADJ JJ Degree=Pos _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 modest modest ADJ JJ Degree=Pos _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 FGF FGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2002 # text = This NF-kappaB binding complex is composed of transcriptionally active p65(RelA)/p50 heterodimers and results primarily from the targeted degradation of IkappaB-alpha, an inhibitor that sequesters Rel/kappaB in the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 p50 p50 NUM CD NumType=Card _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 primarily primarily ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 degradation degradation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 sequesters sequester VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2003 # text = These data are the first to show a connection between FGF-1 signaling and NF-kappaB activation outside of embryonic development. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 show show VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 connection connection NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 outside outside ADP IN _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 23 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2004 # text = The signaling events that link FGF receptor-1 engagement and NF-kappaB activation in Jurkat are probably distinct from the CD28 costimulation pathway, since FGF-1-induced Rel/kappaB binding proteins do not contain significant levels of c-Rel and are not identical with the CD28 response complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 link link VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 FGF Fgf ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 probably probably ADV RB _ _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 24 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 since since ADP IN _ _ _ _ _ 28 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 Rel/ Rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 kappaB kappab NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 contain contain VERB VB VerbForm=Inf _ _ _ _ 40 significant significant ADJ JJ Degree=Pos _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Rel Rel NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 identical identical ADJ JJ Degree=Pos _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 53 response response NOUN NN Number=Sing _ _ _ _ 54 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2005 # text = Document 00300196 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300196 00300196 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2006 # text = Activation of NF-kappa B by interleukin 2 in human blood monocytes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2007 # text = We report here that interleukin 2 (IL-2) acts on human blood monocytes by enhancing binding activity of the transcription factor NF-kappa B to its consensus sequence in the 5' regulatory enhancer region of the IL-2 receptor alpha chain (p55). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 acts act NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 consensus consensus NOUN NN Number=Sing _ _ _ _ 32 sequence sequence NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ' 's PUNCT `` _ _ _ _ _ 37 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 38 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 receptor receptor NOUN NN Number=Sing _ _ _ _ 46 alpha alpha NOUN NN Number=Sing _ _ _ _ 47 chain chain NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2008 # text = Similarly, IL-2 activates NF-kappa B in the human monocytic cell line U 937, but not in resting human T-cells. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 activates activate NOUN NNS Number=Plur _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 U U PROPN NNP Number=Sing _ _ _ _ 18 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 resting rest VERB VBG VerbForm=Ger _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2009 # text = This effect is detectable within 15 min and peaks 1 h after exposure to IL-2. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 15 15 NUM CD NumType=Card _ _ _ _ 7 min min NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 peaks peak NOUN NNS Number=Plur _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 exposure exposure NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2010 # text = Enhanced NF-kappa B binding activity is followed by functional activation in that inducibility of the IL-2 receptor alpha chain is mediated by enhanced NF-kappa B binding and that a heterologous promoter containing the NF-kappa B consensus sequence (-291 to -245) of the IL-2 receptor alpha chain gene is activated. 1 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 binding binde VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 that that PRON WDT PronType=Dem _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 containing contain VERB VBG VerbForm=Ger _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 consensus consensus NOUN NN Number=Sing _ _ _ _ 45 sequence sequence NOUN NN Number=Sing _ _ _ _ 46 (- (- PUNCT . _ _ _ _ SpaceAfter=No 47 291 291 NUM CD NumType=Card _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 245 245 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 2 2 NUM CD NumType=Card _ _ _ _ 57 receptor receptor NOUN NN Number=Sing _ _ _ _ 58 alpha alpha NOUN NN Number=Sing _ _ _ _ 59 chain chain NOUN NN Number=Sing _ _ _ _ 60 gene gene NOUN NN Number=Sing _ _ _ _ 61 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 62 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 2011 # text = In addition, IL-2 is capable of increasing transcript levels of the p50 gene coding for the p50 subunit of the NF-kappa B transcription factor, whereas mRNA levels of the p65 NF-kappa B gene remained unchanged. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 11 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 coding code VERB VBG VerbForm=Ger _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ _ 21 subunit subunit NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 p65 p65 NOUN NN Number=Sing _ _ _ _ 37 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 gene gene PROPN NNP Number=Sing _ _ _ _ 42 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 unchanged unchang ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2012 # text = Document 00300197 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300197 00300197 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2013 # text = A transcriptional regulatory element is associated with a nuclease-hypersensitive site in the pol gene of human immunodeficiency virus type 1. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 nuclease nuclease NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pol pol NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2014 # text = Analysis of the chromatin organization of the integrated human immunodeficiency virus type 1 (HIV-1) genome has previously revealed a major constitutive DNase I-hypersensitive site associated with the pol gene (E. Verdin, J. Virol. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 5 organization organization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 integrated integrate ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 genome genome NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 previously previously ADV RB _ _ _ _ _ 22 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 DNase DNase NOUN NN Number=Sing _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 pol pol NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 E. e. PROPN NNP Number=Sing _ _ _ _ 38 Verdin Verdin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 J. J. PROPN NNP Number=Sing _ _ _ _ 41 Virol Virol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2015 # text = 65:6790-6799, 1991). 1 65:6790-6799 65:6790-6799 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 2016 # text = In the present report, high-resolution mapping of this site with DNase I and micrococcal nuclease identified a nucleosome-free region centered around nucleotides (nt) 4490 to 4766. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 resolution resolution NOUN NN Number=Sing _ _ _ _ 9 mapping mapping NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 DNase DNase NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 micrococcal micrococcal ADJ JJ Degree=Pos _ _ _ _ 18 nuclease nuclease NOUN NN Number=Sing _ _ _ _ 19 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 nucleosome nucleosome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 free free ADJ JJ Degree=Pos _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 around around ADP IN _ _ _ _ _ 27 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 nt not PART RB _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 4490 4490 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 4766 4766 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2017 # text = A 500-bp fragment encompassing this hypersensitive site (nt 4481 to 4982) exhibited transcription-enhancing activity (two- to threefold) when it was cloned in its natural position with respect to the HIV-1 promoter after transient transfection in U937 and CEM cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 500 500 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 fragment fragment NOUN NN Number=Sing _ _ _ _ 6 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nt not PART RB _ _ _ _ _ 12 4481 4481 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 4982 4982 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 enhancing enhancing NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 threefold threefold VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 when when ADV WRB PronType=Int _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 natural natural ADJ JJ Degree=Pos _ _ _ _ 34 position position NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 respect respect NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 after after ADP IN _ _ _ _ _ 44 transient transient ADJ JJ Degree=Pos _ _ _ _ 45 transfection transfection NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 U937 U937 NUM CD NumType=Card _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 CEM cem PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2018 # text = Using in vitro footprinting and gel shift assays, we have identified four distinct binding sites for nuclear proteins within this positive regulatory element. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 gel gel NOUN NN Number=Sing _ _ _ _ 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 four four NUM CD NumType=Card _ _ _ _ 14 distinct distinct NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2019 # text = Site B (nt 4519 to 4545) specifically bound four distinct nuclear protein complexes: a ubiquitous factor, a T-cell-specific factor, a B-cell-specific factor, and the monocyte/macrophage- and B-cell-specific transcription factor PU.1/Spi-1. 1 Site site PROPN NNP Number=Sing _ _ _ _ 2 B b PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 nt not PART RB _ _ _ _ _ 5 4519 4519 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 4545 4545 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ _ 10 bound bound ADP IN _ _ _ _ _ 11 four four NUM CD NumType=Card _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 specific specific ADJ JJ Degree=Pos _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 PU.1/ PU.1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 48 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2020 # text = In most HIV-1 isolates in which this PU box was not conserved, it was replaced by a binding site for the related factor Ets1. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 isolates isolate NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 PU Pu NOUN NN Number=Sing _ _ _ _ 11 box box NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 Ets1 ets1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2021 # text = Factors binding to site C (nt 4681 to 4701) had a DNA-binding specificity similar to that of factors binding to site B, except for PU.1/Spi-1. 1 Factors factor NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 nt not PART RB _ _ _ _ _ 8 4681 4681 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 4701 4701 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 except except ADP IN _ _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 PU.1/ Pu.1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 Spi-1 spi-1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2022 # text = A GC box containing a binding site for Sp1 was identified (nt 4623 to 4631). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 GC Gc NOUN NN Number=Sing _ _ _ _ 3 box box NOUN NN Number=Sing _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 nt not PART RB _ _ _ _ _ 14 4623 4623 NUM CD NumType=Card _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 4631 4631 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2023 # text = Site D (nt 4816 to 4851) specifically bound a ubiquitously expressed factor. 1 Site site PROPN NNP Number=Sing _ _ _ _ 2 D d PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 nt not PART RB _ _ _ _ _ 5 4816 4816 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 4851 4851 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ _ 10 bound bound VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 ubiquitously ubiquitously ADV RB _ _ _ _ _ 13 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2024 # text = These results identify a transcriptional regulatory element associated with a nuclease-hypersensitive site in the pol gene of HIV-1 and suggest that its activity may be controlled by a complex interplay of cis-regulatory elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 nuclease nuclease NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pol pol NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 complex complex ADJ JJ Degree=Pos _ _ _ _ 34 interplay interplay NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cis-regulatory cis-regulatory ADJ JJ Degree=Pos _ _ _ _ 37 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2025 # text = Document 00300198 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300198 00300198 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2026 # text = Induction of endothelial cell surface adhesion molecules by tumor necrosis factor is blocked by protein tyrosine phosphatase inhibitors: role of the nuclear transcription factor NF-kappa B. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2027 # text = Recent studies from our laboratory have indicated that protein tyrosine phosphatase (PTPase) inhibitors can down-modulate the tumor necrosis factor (TNF)-mediated activation of the nuclear transcription factor NF-kappa B in ML-1a, a monocytic cell line (Singh and Aggarwal, J. Biol. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 down down ADV RB _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b PROPN NNP Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 ML Ml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 -1a -1a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 line line NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 Singh Singh PROPN NNP Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 Aggarwal Aggarwal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 J. J. PROPN NNP Number=Sing _ _ _ _ 53 Biol Biol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2028 # text = Chem. 1995: 270: 10631). 1 Chem. Chem. PROPN NNP Number=Sing _ _ _ _ 2 1995 1995 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 270 270 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 10631 10631 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2029 # text = Since TNF is one of the major inducers of various adhesion molecules in human endothelial cells and their expression is known to require the activation of NF-kappa B, we examined the effect of PTPase inhibitors on the TNF-mediated induction of intracellular adhesion molecule (ICAM)-1, vascular cell adhesion molecule (VCAM)-1 and endothelial leukocyte adhesion molecule (ELAM)-1. 1 Since since SCONJ IN _ _ _ _ _ 2 TNF TNF PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 inducers inducer NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 various various ADJ JJ Degree=Pos _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 require require VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 33 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 38 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 47 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 48 molecule molecule NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 58 molecule molecule NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 - - SYM SYM _ _ _ _ SpaceAfter=No 63 1 1 NUM CD NumType=Card _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 66 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 67 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 68 molecule molecule NOUN NN Number=Sing _ _ _ _ 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 ELAM ELAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 72 - - SYM SYM _ _ _ _ SpaceAfter=No 73 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 . . PUNCT . _ _ _ _ _ # sent_id = 2030 # text = Like ML-1a, human dermal microvessel endothelial cells (MVEC) treated with TNF rapidly activated (within 30 min) NF-kappa B; this effect was completely abolished by co-treatment with phenylarsine oxide (PAO), a specific inhibitor of PTPase. 1 Like like ADP IN _ _ _ _ _ 2 ML Ml ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -1a -1a NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 7 microvessel microvessel NOUN NN Number=Sing _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 MVEC MVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 treated treat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 rapidly rapidly ADV RB _ _ _ _ _ 17 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 within within ADP IN _ _ _ _ _ 20 30 30 NUM CD NumType=Card _ _ _ _ 21 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 completely completely ADV RB _ _ _ _ _ 32 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 co-treatment co-treatment NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 phenylarsine phenylarsine NOUN NN Number=Sing _ _ _ _ 37 oxide oxide ADV RB _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 PAO pao INTJ UH _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 specific specific ADJ JJ Degree=Pos _ _ _ _ 44 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2031 # text = The induction of ICAM-1, VCAM-1, and ELAM-1 by TNF in MVEC occurred within 6 h and was also completely down-regulated by PAO in a dose-dependent manner. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ELAM ELAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 MVEC MVEC PROPN NNP Number=Sing _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 6 6 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 completely completely ADV RB _ _ _ _ _ 27 down down ADV RB _ _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 PAO pao PROPN NNP Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2032 # text = PAO was found to be effective even when added 3 h after TNF, suggesting a rapid mode of action of this inhibitor. 1 PAO pao NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 effective effective ADJ JJ Degree=Pos _ _ _ _ 7 even even ADV RB _ _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 mode mode NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 action action NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2033 # text = Besides PAO, other inhibitors of PTPase, including pervanadate and diamide, also blocked TNF-dependent NF-kappa B activation and induction of all the three adhesion proteins. 1 Besides besides ADP IN _ _ _ _ _ 2 PAO pao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 pervanadate pervanadate NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 diamide diamide NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 all all DET PDT _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ _ 30 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2034 # text = Consistent with these results, the attachment of monocytes to MVEC was also blocked by the PTPase inhibitors. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 attachment attachment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 MVEC MVEC PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2035 # text = Thus, overall, our results demonstrate that a PTPase is involved either directly or indirectly in the pathway leading to the induction of endothelial cell adhesion molecules by TNF. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overall overall ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 directly directly ADV RB _ _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 indirectly indirectly ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 molecules molecule NOUN NNS Number=Plur _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2036 # text = Because of their role in cell adhesion, PTPase may provide a novel target of drug development for treatment of inflammation, atherogenesis, and tumor metastasis. 1 Because because ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 provide provide VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 novel novel NOUN NN Number=Sing _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 drug drug NOUN NN Number=Sing _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 atherogenesis atherogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 tumor tumor NOUN NN Number=Sing _ _ _ _ 27 metastasis metastasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2037 # text = Document 00300199 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300199 00300199 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2038 # text = Inhibition of activation of transcription factor AP-1 by CD28 signalling in human T-cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 CD28 CD28 NUM CD NumType=Card _ _ _ _ 12 signalling signalling NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2039 # text = Co-stimulation of T-lymphocytes by T-cell receptor (TcR) occupancy and activation of the CD28 surface molecule results in enhanced proliferation and interleukin 2 (IL-2) production. 1 Co-stimulation Co-stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 26 2 2 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2040 # text = The increase in IL-2 gene expression triggered by CD28 involves a kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2041 # text = B-like sequence in the 5'-regulatory region of the IL-2 promoter, called CD28-responsive element. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2042 # text = Stimulation of T-cells by agonistic anti-CD28 antibodies in conjunction with phorbol 12-myristate 13-acetate (PMA)- or TcR-derived signals induces the enhanced activation of the transcription factor NF-kappa B. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 7 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 acetate acetate NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 TcR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2043 # text = Here we report that CD28 engagement, however, exerts opposite effects on the transcription factor AP-1. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 however however ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2044 # text = Whereas anti-CD28 together with PMA increased the DNA binding and trans-activation activity of NF-kappa B, PMA-induced activation of AP-1 was significantly suppressed. 1 Whereas whereas ADV RB _ _ _ _ _ 2 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 3 together together ADV RB _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PMA PMA PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 significantly significantly ADV RB _ _ _ _ _ 31 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2045 # text = The inhibitory effect exerted by anti-CD28 was observed at the level of DNA binding as well as in functional reporter-gene assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 exerted exert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 anti-CD28 anti-cd28 NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 reporter reporter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2046 # text = These results suggest that the two transcription factors are independently regulated and may perform different functions during T-cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independently independently ADV RB _ _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 perform perform VERB VB VerbForm=Inf _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2047 # text = Document 003001100 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001100 003001100 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2048 # text = Integrin-mediated tyrosine phosphorylation and cytokine message induction in monocytic cells. 1 Integrin- Integrin- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 message message NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2049 # text = A possible signaling role for the Syk tyrosine kinase. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Syk Syk PROPN NNP Number=Sing _ _ _ _ 8 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2050 # text = Activation of cytoplasmic tyrosine kinases is an important aspect of signal transduction mediated by integrins. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinases kinase NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 aspect aspect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 signal signal ADJ JJ Degree=Pos _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2051 # text = In the human monocytic cell line THP-1, either integrin-dependent cell adhesion to fibronectin or ligation of beta 1 integrins with antibodies causes a rapid and intense tyrosine phosphorylation of two sets of proteins of about 65-75 and 120-125 kDa. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 integrin integrin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 ligation ligation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 integrins integrin NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 27 causes cause NOUN NNS Number=Plur _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 intense intense ADJ JJ Degree=Pos _ _ _ _ 32 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 two two NUM CD NumType=Card _ _ _ _ 36 sets set NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 about about ADP IN _ _ _ _ _ 41 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 75 75 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 125 125 NUM CD NumType=Card _ _ _ _ 48 kDa kDa NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2052 # text = In addition, integrin ligation leads to nuclear translocation of the p50 and p65 subunits of the NF-kappa B transcription factor, to activation of a reporter gene driven by a promoter containing NF-kappa B sites, and to increased levels of mRNAs for immediate-early genes, including the cytokine interleukin (IL)-1 beta. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ _ 6 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 nuclear nuclear VERB VB VerbForm=Inf _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 p65 p65 NOUN NN Number=Sing _ _ _ _ 15 subunits subunit NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 containing contain VERB VBG VerbForm=Ger _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 48 for for ADP IN _ _ _ _ _ 49 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 early early ADJ JJ Degree=Pos _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 including include VERB VBG VerbForm=Ger _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 57 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 - - SYM SYM _ _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2053 # text = The tyrosine kinase inhibitors genistein and herbimycin A block both integrin-mediated tyrosine phosphorylation and increases in IL-1 beta message levels, indicating a causal relationship between the two events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 5 genistein genistein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 herbimycin herbimycin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 block block NOUN NN Number=Sing _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 integrin- integrin- SYM NFP _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increases increase NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 message message NOUN NN Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 causal causal ADJ JJ Degree=Pos _ _ _ _ 28 relationship relationship NOUN NN Number=Sing _ _ _ _ 29 between between ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2054 # text = The components tyrosine phosphorylated subsequent to cell adhesion include paxillin, pp125FAK, and the SH2 domain containing tyrosine kinase Syk. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 components component NOUN NNS Number=Plur _ _ _ _ 3 tyrosine tyrosine PRON PRP _ _ _ _ _ 4 phosphorylated phosphorylate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cell cell VERB VB VerbForm=Inf _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 paxillin paxillin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 pp125FAK pp125fak NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 Syk Syk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2055 # text = In contrast, integrin ligation with antibodies induces tyrosine phosphorylation of Syk but not of FAK or paxillin. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 tyrosine tyrosine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Syk Syk PROPN NNP Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FAK Fak NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 paxillin paxillin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2056 # text = In adhering cells, pre-treatment with cytochalasin D suppresses tyrosine phosphorylation of FAK and paxillin but not of Syk, while IL-1 beta message induction is unaffected. 1 In in ADP IN _ _ _ _ _ 2 adhering adhere ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 pre-treatment pre-treatment ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 cytochalasin cytochalasin NOUN NN Number=Sing _ _ _ _ 8 D d NOUN NN Number=Sing _ _ _ _ 9 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tyrosine tyrosine PRON PRP _ _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 FAK Fak NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 paxillin paxillin NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Syk Syk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 message message NOUN NN Number=Sing _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2057 # text = These observations indicate that the Syk tyrosine kinase may be an important component of an integrin signaling pathway in monocytic cells, leading to activation of NF-kappa B and to increased levels of cytokine messages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Syk Syk PROPN NNP Number=Sing _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 component component NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 leading lead VERB VBG VerbForm=Ger _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 37 messages message NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2058 # text = Document 003001101 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001101 003001101 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2059 # text = Sterol dependent LDL-receptor gene transcription in lymphocytes from normal and CML patients. 1 Sterol Sterol PROPN NNP Number=Sing _ _ _ _ 2 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 3 LDL Ldl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CML cml ADJ JJ Degree=Pos _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2060 # text = Sterol regulatory element (SRE) has been recognized to regulate various key genes coding for especially low density lipoprotein (LDL)-receptor, 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase and HMG-CoA synthase known to play a crucial role in the cholesterol feedback mechanism. 1 Sterol Sterol PROPN NNP Number=Sing _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 key key ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 coding code VERB VBG VerbForm=Ger _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 especially especially ADV RB _ _ _ _ _ 18 low low ADJ JJ Degree=Pos _ _ _ _ 19 density density NOUN NN Number=Sing _ _ _ _ 20 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 3- 3- SYM NFP _ _ _ _ SpaceAfter=No 28 hydroxy hydroxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 methylglutaryl methylglutaryl NOUN NN Number=Sing _ _ _ _ 33 coenzyme coenzyme NOUN NN Number=Sing _ _ _ _ 34 A A PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 CoA CoA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 reductase reductase NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CoA CoA PROPN NNP Number=Sing _ _ _ _ 45 synthase synthase NOUN NN Number=Sing _ _ _ _ 46 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 to to PART TO _ _ _ _ _ 48 play play VERB VB VerbForm=Inf _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 51 role role NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 cholesterol cholesterol NOUN NN Number=Sing _ _ _ _ 55 feedback feedback NOUN NN Number=Sing _ _ _ _ 56 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 2061 # text = The deranged cholesterol feedback mechanism has been widely recognised in initiation as well as progression of various types of cancers including chronic myeloid leukaemia (CML). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 deranged derange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cholesterol cholesterol NOUN NN Number=Sing _ _ _ _ 4 feedback feedback NOUN NN Number=Sing _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 widely widely ADV RB _ _ _ _ _ 9 recognised recognise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 initiation initiation NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 progression progression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 various various ADJ JJ Degree=Pos _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cancers cancer NOUN NNS Number=Plur _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 23 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 24 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CML CML NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2062 # text = Consequently, the present study was addressed to understand this phenomenon and revealed the existence of a unique 47 kDa protein factor having affinity for this SRE sequence in lymphocytes from normal subjects as well as its absence in lymphocytes from untreated CML patients. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 addressed address VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 understand understand VERB VB VerbForm=Inf _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 existence existence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 unique unique ADJ JJ Degree=Pos _ _ _ _ 19 47 47 NUM CD NumType=Card _ _ _ _ 20 kDa kDa PROPN NNP Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 having have VERB VBG VerbForm=Ger _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 SRE Sre NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 subjects subjects NOUN NNS Number=Plur _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 well well ADV RB Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 absence absence NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 43 CML cml NOUN NN Number=Sing _ _ _ _ 44 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2063 # text = However, this factor appeared when the CML patients achieved complete haematological remission (CHR) through alpha-interferon therapy. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CML CML PROPN NNP Number=Sing _ _ _ _ 9 patients patient NOUN NN Number=Sing _ _ _ _ 10 achieved achieve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 haematological haematological ADJ JJ Degree=Pos _ _ _ _ 13 remission remission NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CHR CHR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 21 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2064 # text = Further, an inverse relationship was also observed between sterol modulated LDL-receptor gene transcription and the binding affinity of this 47 kDa factor to the SRE sequence. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inverse inverse ADJ JJ Degree=Pos _ _ _ _ 5 relationship relationship NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 sterol sterol NOUN NN Number=Sing _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 LDL LDL NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 affinity affinity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 47 47 NUM CD NumType=Card _ _ _ _ 24 kDa kDa PROPN NNP Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 SRE Sre PROPN NNP Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2065 # text = Based upon these results we propose that alpha-interferon through its receptor initiates phosphatidic acid dependent signalling which in turn regulates the affinity of 47 kDa sterol regulatory element binding factor as well as LDL-receptor gene transcription in lymphocytes from CML patients. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upon upon ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 interferon interferon NOUN NN Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 phosphatidic phosphatidic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 signalling signalling NOUN NN Number=Sing _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 turn turn NOUN NN Number=Sing _ _ _ _ 22 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 47 47 NUM CD NumType=Card _ _ _ _ 27 kDa kDa PROPN NNP Number=Sing _ _ _ _ 28 sterol sterol NOUN NN Number=Sing _ _ _ _ 29 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 as as ADV RB _ _ _ _ _ 34 well well ADV RB Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 43 from from ADP IN _ _ _ _ _ 44 CML CML PROPN NNP Number=Sing _ _ _ _ 45 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2066 # text = Document 003001102 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001102 003001102 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2067 # text = Towards a molecular understanding of T-cell differentiation. 1 Towards towards ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 understanding understanding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2068 # text = Lymphoid differentiation is one of the best studied examples of mammalian development. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 best best ADJ JJS Degree=Sup _ _ _ _ 8 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 examples example NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2069 # text = Here Hans Clevers and Michael Owen describe how the cloning of the genes that encode T-cell-specific membrane proteins allows the identification of transcription factors that control the expression of these T-cell genes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 Hans Hans PROPN NNPS Number=Plur _ _ _ _ 3 Clevers Clevers PROPN NNPS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Michael Michael PROPN NNP Number=Sing _ _ _ _ 6 Owen Owen PROPN NNP Number=Sing _ _ _ _ 7 describe describe VERB VB VerbForm=Inf _ _ _ _ 8 how how ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cloning cloning NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 membrane membrane NOUN NN Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 identification identification NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2070 # text = Such transcription factors play a key role in the development of the mature T-cell phenotype by functioning as 'master regulators of T-cell differentiation'. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 key key ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mature mature ADJ JJ Degree=Pos _ _ _ _ 14 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 functioning function VERB VBG VerbForm=Ger _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 21 master master NOUN NN Number=Sing _ _ _ _ 22 regulators regulator NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2071 # text = Document 003001103 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001103 003001103 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2072 # text = Identification of an ionomycin/cyclosporin A-responsive element within the human T cell receptor gamma enhancer. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2073 # text = Activation through the Ca2+/calcineurin pathway is essential to the transcription of many cytokine genes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 +/ +/ PUNCT HYPH _ _ _ _ SpaceAfter=No 6 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 essential essential ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 many many ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2074 # text = The conserved cis-acting sequence, GGAAAA, and transcription factors binding to this sequence are involved in the response to increased intracellular Ca2+ concentrations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GGAAAA GGAAAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2075 # text = Here we report the identification and importance of the same sequence in a non-cytokine gene, the human T cell receptor gamma (TCRG) enhancer. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 identification identification NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 importance importance NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 non-cytokine non-cytokine ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TCRG TCRG NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2076 # text = Results from site-directed mutations and electrophoretic mobility shift assays strongly suggest that this sequence mediates the ionomycin-induced activation of the TCRG enhancer. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 9 mobility mobility NOUN NN Number=Sing _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 assays assay NOUN NNS Number=Plur _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ionomycin- ionomycin- SYM SYM _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 TCRG TCRG PROPN NNP Number=Sing _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2077 # text = Our studies provide an explanation for a previous observation that TCRG mRNA levels, but not mRNA levels for T cell receptor alpha and -beta, are increased by ionomycin treatment. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 explanation explanation NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 previous previous ADJ JJ Degree=Pos _ _ _ _ 9 observation observation NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 TCRG TCRG VERB VBG VerbForm=Ger _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 mRNA mRNa ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ _ 32 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2078 # text = Document 003001104 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001104 003001104 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2079 # text = NF-kappa B activation by tumor necrosis factor alpha in the Jurkat T cell line is independent of protein kinase A, protein kinase C, and Ca(2+)-regulated kinases. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 +) +) SYM NFP _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2080 # text = NF-kappa B is a DNA-binding regulatory factor able to control transcription of a number of genes, including human immunodeficiency virus (HIV) genes. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 control control VERB VB VerbForm=Inf _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 number number NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2081 # text = In T cells, NF-kappa B is activated upon cellular treatment by phorbol esters and the cytokine tumor necrosis factor alpha (TNF alpha). 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 13 treatment treatment NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 esters ester NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TNF Tnf NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2082 # text = In the present work, we investigated the molecular events leading to NF-kappa B activation by TNF alpha in a human T cell line (Jurkat) and its subclone JCT6, which presents a deficiency in the PKA transduction pathway. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 events event NOUN NNS Number=Plur _ _ _ _ 11 leading lead VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha ADV RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 subclone subclone NOUN NN Number=Sing _ _ _ _ 33 JCT6 Jct6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 presents present VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 PKA PKA PROPN NNP Number=Sing _ _ _ _ 42 transduction transduction NOUN NN Number=Sing _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2083 # text = We found that in both cell lines, both phorbol ester and TNF alpha were able to activate NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 TNF TNF NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2084 # text = Phorbol activation was positively modulated by Ca2+ influx while TNF alpha activation was not. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 positively positively ADV RB _ _ _ _ _ 5 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 influx influx NUM CD NumType=Card _ _ _ _ 10 while while SCONJ IN _ _ _ _ _ 11 TNF TNF NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2085 # text = Furthermore, while PMA activation was inhibited by the PKC inhibitor staurosporin, the TNF alpha effect was unchanged. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 PKC PKC NOUN NN Number=Sing _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 staurosporin staurosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 unchanged unchange ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2086 # text = TNF alpha did not activate cAMP production and its signal was not modulated by cAMP activators. 1 TNF TNF PROPN NNP Number=Sing _ _ _ _ 2 alpha alpha PROPN NNP Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 cAMP camp NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2087 # text = Moreover, cAMP activators did not activate NF-kappa B in Jurkat cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cAMP camp NOUN NN Number=Sing _ _ _ _ 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2088 # text = Thus, TNF alpha-induced NF-kappa B activation was found to be mediated by none of the major signal-mediating kinases such as protein kinase C (PKC), protein kinase A, or Ca(2+)-regulated kinases. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ _ 4 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 none none NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 kinase kinase NOUN NN Number=Sing _ _ _ _ 36 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 +) +) SYM NFP _ _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2089 # text = Furthermore, we found that cytoplasmic acidification facilitated NF-kappa B activation by both TNF alpha and PKC, by a mechanism that increases NF-kappa B/I kappa B dissociation without affecting the NF-kappa B translocation step. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 acidification acidification NOUN NN Number=Sing _ _ _ _ 8 facilitated facilitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B/ Bith PUNCT HYPH _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 34 without without SCONJ IN _ _ _ _ _ 35 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 translocation translocation NOUN NN Number=Sing _ _ _ _ 42 step step NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2090 # text = Document 003001105 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001105 003001105 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2091 # text = Abnormal apoptosis and cell cycle progression in humans exposed to methyl tertiary-butyl ether and benzene contaminating water. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 progression progression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 humans human NOUN NNS Number=Plur _ _ _ _ 9 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 methyl methyl VERB VB VerbForm=Inf _ _ _ _ 12 tertiary tertiary NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 butyl butyl NOUN NN Number=Sing _ _ _ _ 15 ether ether NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 benzene benzene NOUN NN Number=Sing _ _ _ _ 18 contaminating contaminate VERB VBG VerbForm=Ger _ _ _ _ 19 water water NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2092 # text = 1. In this study we hypothesized that in individuals with certain genetic makeup, MTBE, benzene or their metabolites act as adducts and may induce programmed cell death. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 individuals individual NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 certain certain ADJ JJ Degree=Pos _ _ _ _ 13 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 14 makeup makeup NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 MTBE Mtbe PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 benzene benzene PRON PRP _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 metabolites metabolite NOUN NN Number=Sing _ _ _ _ 22 act act NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 adducts adduct NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2093 # text = 2. Our study involved a group of 60 male and female subjects who were exposed to MTBE and benzene-contaminated water concentrations up to 76 PPB for MTBE and 14 PPB for benzene, for a period of 5 to 8 years. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 60 60 NUM CD NumType=Card _ _ _ _ 10 male male NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 female female ADJ JJ Degree=Pos _ _ _ _ 13 subjects subject NOUN NNS Number=Plur _ _ _ _ 14 who who PRON WP PronType=Rel _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 MTBE Mtbe VERB VB VerbForm=Inf _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 benzene benzene VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 contaminated contaminate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 water water NOUN NN Number=Sing _ _ _ _ 24 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 25 up up ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 76 76 NUM CD NumType=Card _ _ _ _ 28 PPB Ppb PROPN NNP Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 MTBE MTBE PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 14 14 NUM CD NumType=Card _ _ _ _ 33 PPB Ppb PROPN NNP Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 period period NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 5 5 NUM CD NumType=Card _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 8 8 NUM CD NumType=Card _ _ _ _ 44 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2094 # text = For comparison, we recruited a control group consisting of 32 healthy males and females with similar age distribution and without a history of exposure to MTBE or benzene. 1 For for ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 recruited recruit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 group group NOUN NN Number=Sing _ _ _ _ 9 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 32 32 NUM CD NumType=Card _ _ _ _ 12 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 13 males male NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 females female NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 age age NOUN NN Number=Sing _ _ _ _ 19 distribution distribution NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 without without ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 history history NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 MTBE MTBE PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2095 # text = 3. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 2096 # text = Peripheral blood lymphocytes (PBL) of both groups were tested for the percentage of apoptotic cells and cell cycle progression using flow cytometry. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 groups group NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 percentage percentage NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell VERB VB VerbForm=Inf _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ _ 21 progression progression NOUN NN Number=Sing _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 flow flow ADJ JJ Degree=Pos _ _ _ _ 24 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2097 # text = 4. When apoptotic lymphocytes from exposed individuals were compared to apoptotic lymphocytes from the control group, statistically-significant differences between each mean group were detected (26.4 +/- 1.8 and 12.1 +/- 1.3, respectively), indicating an increased rate of apoptosis in 80.5% of exposed individuals (P < 0.0001, Mann-Whitney U-Test). 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 When when ADV WRB PronType=Int _ _ _ _ 4 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 exposed exposed ADJ JJ Degree=Pos _ _ _ _ 8 individuals individual NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 statistically statistically ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 differences difference NOUN NNS Number=Plur _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 each each DET DT _ _ _ _ _ 25 mean mean VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 26.4 26.4 NUM CD NumType=Card _ _ _ _ 31 +/- +/- SYM SYM _ _ _ _ _ 32 1.8 1.8 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 12.1 12.1 NUM CD NumType=Card _ _ _ _ 35 +/- +/- SYM SYM _ _ _ _ _ 36 1.3 1.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 rate rate NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 80.5 80.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 % % SYM NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 individuals individual NOUN NNS Number=Plur _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 P p NOUN NN Number=Sing _ _ _ _ 55 < < PUNCT -LRB- _ _ _ _ _ 56 0.0001 0.0001 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 Mann Mann PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 Whitney Whitney PROPN NNP Number=Sing _ _ _ _ 61 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 Test Test PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 2098 # text = MTBE and benzene-induced apoptosis is attributed to a discrete block within the cell cycle progression. 1 MTBE Mtbe VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 benzene benzene VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 discrete discrete NOUN NN Number=Sing _ _ _ _ 12 block block NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2099 # text = Because cell cycle analysis showed that in PBL from chemically-exposed individuals, between 20-50% of cells were accumulated at the S-G2/M boundaries. 1 Because because SCONJ IN _ _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 cycle cycle NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 PBL PBL PROPN NNP Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 chemically chemically ADV RB _ _ _ _ SpaceAfter=No 11 -exposed -expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 S- s- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 G2/ G2/ PUNCT HYPH _ _ _ _ SpaceAfter=No 27 M m NOUN NN Number=Sing _ _ _ _ 28 boundaries boundary NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2100 # text = 5. One of the signaling molecules which mediates programmed cell death is nuclear factor Kappa-B (NF-kappa B). 1 5 5 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 One one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 death death NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 Kappa Kappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 B B PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2101 # text = NF-kappa B was examined as one of the many molecular mechanisms for mediating cell death by MTBE and benzene. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 many many ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 death death NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 MTBE Mtbe PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2102 # text = Indeed, addition of inhibitors of NF-kappa B activation pyrrolidine dithiocarbamate (PDTC), to the lymphocytes of the chemically-exposed group was capable of inhibiting programmed cell death by 40%. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 13 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 chemically chemically ADV RB _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 capable capable ADJ JJ Degree=Pos _ _ _ _ 29 of of SCONJ IN _ _ _ _ _ 30 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 31 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 death death NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2103 # text = This reversal of apoptosis almost to the control level by inhibitor of NF-kappa B activation may indicate involvement of this signaling molecule in MTBE and benzene induction of programmed cell death. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 reversal reversal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 indicate indicate VERB VB VerbForm=Inf _ _ _ _ 20 involvement involvement NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 MTBE MTBE NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 benzene benzene NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2104 # text = Document 003001106 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001106 003001106 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2105 # text = Constitutive expression of p50 homodimer in freshly isolated human monocytes decreases with in vitro and in vivo differentiation: 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 freshly freshly ADV RB _ _ _ _ _ 8 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ # sent_id = 2106 # text = a possible mechanism influencing human immunodeficiency virus replication in monocytes and mature macrophages. 1 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 mature mature ADJ JJ Degree=Pos _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2107 # text = Human immunodeficiency virus type 1 (HIV-1) replicates more efficiently in vitro in differentiated macrophages than in freshly isolated monocytes. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 replicates replicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 more more ADV RBR _ _ _ _ _ 13 efficiently efficiently ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 differentiated differentiated ADJ JJ Degree=Pos _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 freshly freshly ADV RB _ _ _ _ _ 22 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2108 # text = We investigated whether this may be partly explained by changes in expression of NF-kappaB with monocyte differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 partly partly ADV RB _ _ _ _ _ 8 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2109 # text = We demonstrated that constitutive expression of NF-kappaB in primary human monocytes changed significantly with differentiation in vitro to monocyte-derived macrophages (MDMs) and differentiation in vivo to alveolar macrophages (AMs). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 primary primary ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 changed change VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vitro vitro NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 monocyte monocyte VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vivo vivo NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 alveolar alveolar VERB VB VerbForm=Inf _ _ _ _ 34 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 AMs am NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2110 # text = Freshly isolated monocytes constitutively expressed high levels of transcriptionally inactive p50 homodimer which decreased with time in culture in favor of the transcriptionally active p50/p65 and p50/RelB heterodimers. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 11 p50 p50 NOUN NN Number=Sing _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 favor favor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptionally transcriptionally ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 p65 p65 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 30 RelB RelB NOUN NN Number=Sing _ _ _ _ 31 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2111 # text = As in MDMs, AMs constitutively expressed p50/p65 and p50/RelB although at lower levels. 1 As as ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 AMs AMs PROPN NNPS Number=Plur _ _ _ _ 6 constitutively constitutively ADV RB _ _ _ _ _ 7 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 p65 p65 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 13 RelB RelB PROPN NNP Number=Sing _ _ _ _ 14 although although SCONJ IN _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 lower lower ADJ JJR Degree=Cmp _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2112 # text = HIV infection of fresh monocytes failed to induce p50/p65 as seen in MDMs. 1 HIV haHive NOUN NN Number=Sing _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2113 # text = The replacement of p50 homodimers with transcriptionally active heterodimers following time in culture may partially explain the progressive increase in susceptibility of monocytes to HIV infection during in vitro culture. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 replacement replacement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 transcriptionally transcriptionally ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 10 following follow VERB VBG VerbForm=Ger _ _ _ _ 11 time time NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 culture culture NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 partially partially ADV RB _ _ _ _ _ 16 explain explain VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 progressive progressive ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2114 # text = The change in NF-kappaB components with monocyte differentiation in vivo may also explain the different transcriptional activities of these cell populations in HIV-infected individuals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 change change NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 explain explain VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activities activity NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 populations population NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2115 # text = Document 003001107 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001107 003001107 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2116 # text = Involvement of Alu sequences in the cell-specific regulation of transcription of the gamma chain of Fc and T cell receptors. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Alu Alu PROPN NNP Number=Sing _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Fc Fc PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2117 # text = The Fc epsilon RI-gamma chains are expressed in a variety of hematopoietic cells where they play a critical role in signal transduction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Fc Fc PROPN NNP Number=Sing _ _ _ _ 3 epsilon epsilon ADP IN _ _ _ _ _ 4 RI RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 chains chain NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 where where ADV WRB PronType=Rel _ _ _ _ 17 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 18 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 critical critical ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 signal signal ADJ JJ Degree=Pos _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2118 # text = They are part of the high affinity 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 part part NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 affinity affinity NOUN NN Number=Sing _ _ _ _ # sent_id = 2119 # text = IgE receptor in mast cells, basophils, Langerhans cells, and possibly other cells; a component of the low affinity receptor for IgG (Fc gamma RIIIA or CD16) in natural killer cells and macrophages; and part of the T cell antigen receptor in subsets of T cells. 1 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 mast mast ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 basophils basophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Langerhans Langerhans VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 possibly possibly ADV RB _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 affinity affinity NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 IgG IgG PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 Fc Fc PROPN NNP Number=Sing _ _ _ _ 28 gamma gamma PROPN NNP Number=Sing _ _ _ _ 29 RIIIA RIIIA PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 CD16 CD16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 natural natural ADJ JJ Degree=Pos _ _ _ _ 35 killer killer NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ; ; PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 part part NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 T T PROPN NNP Number=Sing _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 antigen antigen NUM CD NumType=Card _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 subsets subset NOUN NNS Number=Plur _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2120 # text = Here we have investigated the transcriptional regulation of the gamma chain gene by analyzing the 2.5-kilobase sequence upstream of the transcription start site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 chain chain NOUN NN Number=Sing _ _ _ _ 12 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 analyzing analyze VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 start start NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2121 # text = This sequence contains a promoter specific to cells of hematopoietic lineage. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2122 # text = However, the tissue specificity of this promoter is only partial because it is active in all of the hematopoietic cells tested here, regardless of whether they constitutively express Fc epsilon RI- gamma chain transcripts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 5 specificity specificity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 partial partial ADJ JJ Degree=Pos _ _ _ _ 12 because because SCONJ IN _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 all all DET DT _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 regardless regardless ADV RB _ _ _ _ _ 26 of of SCONJ IN _ _ _ _ _ 27 whether whether SCONJ IN _ _ _ _ _ 28 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 constitutively constitutively VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 express express ADJ JJ Degree=Pos _ _ _ _ 31 Fc Fc PROPN NNP Number=Sing _ _ _ _ 32 epsilon epsilon ADP IN _ _ _ _ _ 33 RI Ri PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ _ 35 gamma gamma NOUN NN Number=Sing _ _ _ _ 36 chain chain NOUN NN Number=Sing _ _ _ _ 37 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2123 # text = We have identified two adjacent cis-acting regulatory elements, both of which are part of an Alu repeat. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 part part NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 Alu Alu PROPN NNP Number=Sing _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2124 # text = The first (-445/-366) is a positive element active in both basophils and T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 -445/- -445/- SYM SYM _ _ _ _ SpaceAfter=No 5 366 366 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 basophils basophil NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2125 # text = The second (-365/-264) binds to nuclear factors, which appear to be different in basophils and T cells, and acts as a negative element in basophils and as a positive one in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 -365/- -365/- SYM SYM _ _ _ _ SpaceAfter=No 5 264 264 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 binds bind NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 basophils basophil NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 basophils basophil NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 positive positive ADJ JJ Degree=Pos _ _ _ _ 35 one one NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2126 # text = Thus, this Alu repeat (90% identical to Alu consensus sequences) has evolved to become both a positive and negative regulator. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 Alu Alu PROPN NNP Number=Sing _ _ _ _ 5 repeat repeat NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 % % SYM NN Number=Sing _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 Alu Alu PROPN NNP Number=Sing _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 become become VERB VB VerbForm=Inf _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 positive positive ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2127 # text = Document 003001108 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001108 003001108 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2128 # text = Fcgamma receptor-mediated mitogen-activated protein kinase activation in monocytes is independent of Ras. 1 Fcgamma Fcgamma PROPN NNP Number=Sing _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2129 # text = Receptors for the Fc portion of immunoglobulin molecules (FcR) present on leukocyte cell membranes mediate a large number of cellular responses that are very important in host defense, including phagocytosis, cell cytotoxicity, production and secretion of inflammatory mediators, and modulation of the immune response. 1 Receptors Receptor NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 5 portion portion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FcR FcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 present present ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 membranes membrane NOUN NNS Number=Plur _ _ _ _ 17 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 large large ADJ JJ Degree=Pos _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 responses respons NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 very very ADV RB _ _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 host host NOUN NN Number=Sing _ _ _ _ 30 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 including include VERB VBG VerbForm=Ger _ _ _ _ 33 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 production production NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 secretion secretion NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 43 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 modulation modulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 immune immune ADJ JJ Degree=Pos _ _ _ _ 50 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2130 # text = Cross-linking of FcR with immune complexes leads, first to activation of protein-tyrosine kinases. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 FcR FcR PROPN NNP Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 first first ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2131 # text = The molecular events that follow and that transduce signals from these receptors to the nucleus are still poorly defined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 transduce transduce NOUN NN Number=Sing _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 still still ADV RB _ _ _ _ _ 18 poorly poorly ADV RB _ _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2132 # text = We have investigated the signal transduction pathway from Fc receptors that leads to gene activation and production of cytokines in monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transduction transduction NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 gene gene VERB VB VerbForm=Inf _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2133 # text = Cross-linking of FcR, on the THP-1 monocytic cell line, by immune complexes resulted in both activation of the transcription factor NF-kappaB and interleukin 1 production. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 FcR FcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 complexes complexe NOUN NNS Number=Plur _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2134 # text = These responses were completely blocked by tyrosine kinase inhibitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 responses response NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2135 # text = In contrast, expression of dominant negative mutants of Ras and Raf-1, in these cells, did not have any effect on FcR-mediated nuclear factor activation, suggesting that the mitogen-activated protein kinase (MAPK) signaling pathway was not used by these receptors. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ras Ras PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 have have VERB VB VerbForm=Inf _ _ _ _ 23 any any DET DT _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 FcR-mediated FcR-mediated ADJ JJ Degree=Pos _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 signaling signale NOUN NN Number=Sing _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 49 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2136 # text = However, MAPK activation was easily detected by in vitro kinase assays, after FcR cross-linking with immune complexes. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 easily easily ADV RB _ _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NUM CD NumType=Card _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 FcR Fcr NOUN NN Number=Sing _ _ _ _ 16 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2137 # text = Using the specific MAPK/extracellular signal-regulated kinase kinase (MAPK kinase) inhibitor PD98059, we found that MAPK activation is necessary for FcR-dependent activation of the nuclear factor NF-kappaB. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MAPK MAPK NUM CD NumType=Card _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 PD98059 Pd98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 FcR-dependent FcR-dependent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2138 # text = These results strongly suggest that the signaling pathway from Fc receptors leading to expression of different genes important to leukocyte biology, initiates with tyrosine kinases and requires MAPK activation; but in contrast to other tyrosine kinase receptors, FcR-mediated MAPK activation does not involve Ras and Raf. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 Fc Fc PROPN NNP Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 leading lead VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 leukocyte leukocyte VERB VB VerbForm=Inf _ _ _ _ 21 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 26 kinases kinase NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 MAPK Mapk PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 contrast contrast NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 other other ADJ JJ Degree=Pos _ _ _ _ 37 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 FcR-mediated FcR-mediated ADJ JJ Degree=Pos _ _ _ _ 42 MAPK MAPK NOUN NN Number=Sing _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 involve involve VERB VB VerbForm=Inf _ _ _ _ 47 Ras Ras PROPN NNP Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2139 # text = Document 003001109 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001109 003001109 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2140 # text = In vivo inhibition of NF-kappa B in T-lineage cells leads to a dramatic decrease in cell proliferation and cytokine production and to increased cell apoptosis in response to mitogenic stimuli, but not to abnormal thymopoiesis. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 lineage lineage NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 17 decrease decrease NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 33 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 abnormal abnormal VERB VB VerbForm=Inf _ _ _ _ 39 thymopoiesis thymopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2141 # text = To understand the role of NF-kappa B complexes in T cell development and activation, we have generated transgenic mice in which RelA and c-Rel complexes were selectively inhibited in the T-lineage cells by specific expression of a trans-dominant form of I kappa B alpha. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 RelA RelA PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Rel Rel NOUN NN Number=Sing _ _ _ _ 30 complexes complex NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 selectively selectively ADV RB _ _ _ _ _ 33 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 lineage lineage NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 specific specific ADJ JJ Degree=Pos _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 47 form form NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 50 kappa kappa PROPN NNP Number=Sing _ _ _ _ 51 B b PROPN NNP Number=Sing _ _ _ _ 52 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2142 # text = Transgene expression did not affect the thymic development, but led to lowered numbers of splenic T cells and to a dramatic decrease in the ex vivo proliferative response of splenic T lymphocytes. 1 Transgene Transgene PROPN NNP Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 affect affect VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 lowered lower ADJ JJ Degree=Pos _ _ _ _ 14 numbers number NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 decrease decrease NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 ex ex NOUN NN Number=Sing _ _ _ _ 27 vivo vivo ADP IN _ _ _ _ _ 28 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2143 # text = Analysis of IL-2 and IL-2R alpha expression demonstrated that the perturbation of the proliferation response was not attributable to an abnormal expression of these genes. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 perturbation perturbation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2144 # text = In contrast, expression of IL-4, IL-10, and IFN-gamma was strongly inhibited in the transgenic T cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 strongly strongly ADV RB _ _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2145 # text = The proliferative deficiency of the transgenic T cells was associated with an increased apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 3 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2146 # text = These results point out the involvement of NF-kappa B/Rel family proteins in growth signaling pathways by either regulating proteins involved in the IL-2 signaling or by functionally interfering with the cell cycle progression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 point point VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 out out ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 involvement involvement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 pathways pathways NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 either either CCONJ CC _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 by by SCONJ IN _ _ _ _ _ 33 functionally functionally ADV RB _ _ _ _ _ 34 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 cycle cycle NOUN NN Number=Sing _ _ _ _ 39 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2147 # text = Document 003001110 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001110 003001110 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2148 # text = DNA-binding studies of the Epstein-Barr virus nuclear antigen 2 (EBNA-2): evidence for complex formation by latent membrane protein gene promoter-binding proteins in EBNA-2-positive cell lines. 1 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 antigen antigen NOUN NN Number=Sing _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBNA EBNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 evidence evidence NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 complex complex ADJ JJ Degree=Pos _ _ _ _ 23 formation formation NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 latent latent ADJ JJ Degree=Pos _ _ _ _ 26 membrane membrane NOUN NN Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 positive positive ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2149 # text = The Epstein-Barr virus (EBV) nuclear antigen 2 (EBNA-2) protein is essential for the immortalization of human primary B cells by EBV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 antigen antigen NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 EBNA EBNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2150 # text = EBNA-2 trans-activates cellular and viral genes like CD23, c-fgr, latent membrane protein 1 (LMP1) and terminal protein 1 (TP1). 1 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 activates activate NOUN NNS Number=Plur _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 like like ADP IN _ _ _ _ _ 12 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 fgr fgr ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 latent latent ADJ JJ Degree=Pos _ _ _ _ 18 membrane membrane NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TP1 TP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2151 # text = Trans-activation of the TP1 promoter and of the BamHI C promoter has already been investigated in detail and appears to be mediated via protein-protein interactions and not by direct binding of EBNA-2 type A (of EBV type 1) to the DNA. 1 Trans- Trans- SYM NFP _ _ _ _ SpaceAfter=No 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TP1 tP1 PROPN NNP Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 BamHI BamHI PROPN NNP Number=Sing _ _ _ _ 11 C C PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 already already ADV RB _ _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 detail detail NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 interactions interaction NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 direct direct ADJ JJ Degree=Pos _ _ _ _ 32 binding binding NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 type type NOUN NN Number=Sing _ _ _ _ 38 A a SYM SYM _ _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 of of ADP IN _ _ _ _ _ 41 EBV EBV PROPN NNP Number=Sing _ _ _ _ 42 type type NOUN NN Number=Sing _ _ _ _ 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 DNA. DNA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 2152 # text = EBNA-2 is able to trans-activate the expression of the LMP gene in several cell lines. 1 EBNA EBNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 LMP LMP PROPN NNP Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2153 # text = Various reports have delineated the cis-acting elements of the LMP promoter through which EBNA-2 mediates trans-activation. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 delineated delineate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 acting acting VERB VBG VerbForm=Ger _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 LMP LMP PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 mediates mediate NOUN NNS Number=Plur _ _ _ _ 20 trans- trans- SYM SYM _ _ _ _ SpaceAfter=No 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2154 # text = To determine whether EBNA-2 also trans-activates the LMP promoter by protein-protein interactions, we performed a series of gel retardation assays and competition experiments with LMP promoter fragments of different sizes. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 trans tran VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 LMP LMP NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 series series NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 retardation retardation NOUN NN Number=Sing _ _ _ _ 26 assays assay NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 competition competition NOUN NN Number=Sing _ _ _ _ 29 experiments experiment NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 LMP LMP NOUN NN Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 fragments fragment NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 different different ADJ JJ Degree=Pos _ _ _ _ 36 sizes size NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2155 # text = We determined that the protein-binding region on the LMP promoter was within a 42 bp fragment encompassing nucleotides -135 to -176 relative to the LMP transcriptional start site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LMP LMP NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 42 42 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 fragment fragment NOUN NN Number=Sing _ _ _ _ 18 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 19 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 135 135 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 176 176 NUM CD NumType=Card _ _ _ _ 25 relative relative ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LMP LMP PROPN NNP Number=Sing _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 start start NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2156 # text = None of the DNA fragments investigated indicated interaction of EBNA-2 with the DNA via protein-protein interactions. 1 None none NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 indicated indicated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2157 # text = No significant differences between EBNA-2-positive and EBNA-2-negative nuclear extracts could be seen in the gel retardation assay under conditions that clearly showed binding of EBNA-2A to the TP1 promoter. 1 No no DET DT _ _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 negative negative ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gel gel NOUN NN Number=Sing _ _ _ _ 24 retardation retardation NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 conditions condition NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 clearly clearly ADV RB _ _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2A 2A PROPN NNP Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TP1 tP1 PROPN NNP Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2158 # text = However, analysis of sucrose gradient fractions in the gel retardation assay provided evidence that the LMP promoter-binding proteins form a complex of higher M(r) in EBNA-2-positive cell extracts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 sucrose sucrise DET DT Number=Plur|PronType=Dem _ _ _ _ 6 gradient gradient ADJ JJ Degree=Pos _ _ _ _ 7 fractions fraction NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gel gel NOUN NN Number=Sing _ _ _ _ 11 retardation retardation NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ _ 13 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 evidence evidence NOUN NN Number=Sing _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 LMP LMP PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 form from ADP IN Typo=Yes _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 higher higher ADJ JJR Degree=Cmp _ _ _ _ 27 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 r r NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 positive positive ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2159 # text = These complexes were destroyed by detergent. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 destroyed destroy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 detergent detergent NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 2160 # text = We deduce from these results that EBNA-2-positive cells might indeed contain specific complexes bound to the LMP promoter which are, however, too labile to be detected in a standard gel retardation assay. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 deduce deduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 positive positive ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 indeed indeed ADV RB _ _ _ _ _ 15 contain contain VERB VB VerbForm=Inf _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 complexes complexe NOUN NNS Number=Plur _ _ _ _ 18 bound bound ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 LMP Lmp NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 too too ADV RB _ _ _ _ _ 29 labile labile ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 standard standard ADJ JJ Degree=Pos _ _ _ _ 36 gel gel NOUN NN Number=Sing _ _ _ _ 37 retardation retardation NOUN NN Number=Sing _ _ _ _ 38 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2161 # text = Document 003001111 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001111 003001111 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2162 # text = Immune hyperactivation of HIV-1-infected T cells mediated by Tat and the CD28 pathway. 1 Immune Immune PROPN NNP Number=Sing _ _ _ _ 2 hyperactivation hyperactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Tat Tat PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2163 # text = Human immunodeficiency virus-type 1 (HIV-1) infection is characterized by a chronic state of immune hyperactivation in patients. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 state state NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 hyperactivation hyperactivation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2164 # text = Infection of human peripheral blood lymphocytes with HIV-1 in vitro resulted in increased interleukin-2 (IL-2) secretion in response to T cell activation via the CD3 and CD28 receptors. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NUM CD NumType=Card _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 via via ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 36 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2165 # text = Expression of the HIV-1 transactivator 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ # sent_id = 2166 # text = Tat recapitulated this phenotype and was associated with increased IL-2 secretion in response to costimulation with CD3 plus CD28. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 recapitulated recapitulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 secretion secretion NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 costimulation costimulation VERB VB VerbForm=Inf _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 20 plus plus CCONJ CC _ _ _ _ _ 21 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2167 # text = IL-2 superinduction by 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 superinduction superinduction NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ # sent_id = 2168 # text = Tat occurred at the transcriptional level, was mediated by the CD28-responsive element in the IL-2 promoter, and was exclusively dependent on the 29 amino acids encoded by the second exon of Tat. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 exclusively exclusively ADV RB _ _ _ _ _ 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 29 29 NUM CD NumType=Card _ _ _ _ 30 amino amino NOUN NN Number=Sing _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ _ 32 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 36 exon exon NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2169 # text = Document 003001112 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001112 003001112 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2170 # text = Regulation of CD14 expression during monocytic differentiation induced with 1 alpha,25-dihydroxyvitamin D3. CD14, a monocyte/macrophage receptor for the complex of LPS and LPS binding protein, is a differentiation marker for the monocyte/macrophage lineage. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 14 14 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -dihydroxyvitamin -dihydroxyvitamin ADJ JJ Degree=Pos _ _ _ _ 14 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 16 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 LPS LPS PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 marker marker NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 42 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2171 # text = We have analyzed the regulation of CD14 expression during 1 alpha,25-dihydroxyvitamin D3 (VitD3)-induced monocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 14 D3 D3 NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2172 # text = Using FACS, Northern blotting, and nuclear run-on analyses, we demonstrate that the up-regulation of CD14 expression during monocytic cell maturation is regulated mainly at the level of gene transcription, and that new protein synthesis is required for CD14 induction. 1 Using use AUX VBG VerbForm=Ger _ _ _ _ 2 FACS Fac ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 5 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 on on ADP IN _ _ _ _ _ 12 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 14 14 NUM CD NumType=Card _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 mainly mainly ADV RB _ _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 new new ADJ JJ Degree=Pos _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 CD14 CD14 NUM CD NumType=Card _ _ _ _ 48 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2173 # text = We have recently cloned the CD14 5' upstream sequence and demonstrated its tissue-specific promoter activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD C NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2174 # text = Using stable transfection of the monocytoid U937 cell line with a series of deletion mutants of the CD14 5' upstream sequence coupled to a reporter gene construct, we show that bp -128 to -70 is the critical region for the induction of CD14 expression. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 stable stable ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 7 U937 U937 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 series series NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 deletion deletion NOUN NN Number=Sing _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 14 14 NUM CD NumType=Card _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 bp bp NOUN NN Number=Sing _ _ _ _ 35 -128 -128 NUM CD NumType=Card _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 70 70 NUM CD NumType=Card _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 critical critical ADJ JJ Degree=Pos _ _ _ _ 42 region region NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 14 14 NUM CD NumType=Card _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2175 # text = This region contains two binding sites for the Sp1 transcription factor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2176 # text = A 3-bp mutation at the distal Sp1-binding site not only eliminates Sp1 interaction, but also abolishes most of the VitD3 induction of CD14 expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 distal distal ADJ JJ Degree=Pos _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 eliminates eliminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 abolishes abolish ADV RB _ _ _ _ _ 22 most most ADJ JJS Degree=Sup _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 14 14 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2177 # text = Electrophoretic mobility shift analysis does not detect a direct interaction of the CD14 distal Sp1-binding site with the vitamin D3 receptor and its partner, the retinoid X receptor. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 detect detect VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 direct direct ADJ JJ Degree=Pos _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 14 14 NUM CD NumType=Card _ _ _ _ 15 distal distal ADJ JJ Degree=Pos _ _ _ _ 16 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -binding -bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 22 D3 D3 NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 partner partner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 30 X x ADP IN _ _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2178 # text = These data demonstrate that VitD3 induces CD14 indirectly through some intermediary factor, and suggest a critical role for Sp1 in this process. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 indirectly indirectly ADV RB _ _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 some some DET DT _ _ _ _ _ 12 intermediary intermediary ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2179 # text = Document 003001113 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001113 003001113 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2180 # text = Overexpression of HSF2-beta inhibits hemin-induced heat shock gene expression and erythroid differentiation in K562 cells. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 7 hemin- hemin- PUNCT : _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 heat heat NOUN NN Number=Sing _ _ _ _ 10 shock shock NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 K562 K562 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2181 # text = Acquisition of heat shock factor 2 (HSF2) DNA binding activity is accompanied by induced transcription of heat shock genes in hemin-treated K562 cells undergoing erythroid differentiation. 1 Acquisition Acquisition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 heat heat NOUN NN Number=Sing _ _ _ _ 4 shock shock NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 heat heat NOUN NN Number=Sing _ _ _ _ 20 shock shock NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 hemin hemin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 K562 K562 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 undergoing undergoing VERB VBG VerbForm=Ger _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2182 # text = Previous studies revealed that HSF2 consists of two alternatively spliced isoforms, HSF2-alpha and HSF2-beta, whose relative abundance is developmentally regulated and varies between different tissues. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HSF2 HSF2 NUM CD NumType=Card _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 alternatively alternatively ADV RB _ _ _ _ _ 10 spliced splice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 HSF2 Hsf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 relative relative ADJ JJ Degree=Pos _ _ _ _ 23 abundance abundance NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 developmentally developmentally ADV RB _ _ _ _ _ 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 varies varies NOUN NNS Number=Plur _ _ _ _ 29 between between ADP IN _ _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2183 # text = To investigate whether the molar ratio of HSF2-alpha and HSF2-beta isoforms is crucial for the activation of HSF2 and whether the HSF2 isoforms play functionally distinct roles during the hemin-mediated erythroid differentiation, we generated cell clones expressing different levels of HSF2-alpha and HSF2-beta. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molar molar ADJ JJ Degree=Pos _ _ _ _ 6 ratio ratio NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ _ 27 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 functionally functionally ADV RB _ _ _ _ _ 30 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 31 roles role NOUN NNS Number=Plur _ _ _ _ 32 during during ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 hemin- hemin- SYM SYM _ _ _ _ SpaceAfter=No 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 clones clone NOUN NNS Number=Plur _ _ _ _ 43 expressing express VERB VBG VerbForm=Ger _ _ _ _ 44 different different ADJ JJ Degree=Pos _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 HSF2 Hsf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 alpha alpha NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2184 # text = We show that in parental K562 cells, the HSF2-alpha isoform is predominantly expressed and HSF2 can be activated upon hemin treatment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 parental parental ADJ JJ Degree=Pos _ _ _ _ 6 K562 K562 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 isoform isoform NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 predominantly predominantly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 HSF2 Hsf2 NUM CD NumType=Card _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 hemin hemin ADJ JJ Degree=Pos _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2185 # text = In contrast, when HSF2-beta is expressed at levels exceeding those of endogenous HSF2-alpha, the hemin-induced DNA binding activity and transcription of heat shock genes are repressed, whereas overexpression of HSF2-alpha results in an enhanced hemin response. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 when when ADV WRB PronType=Int _ _ _ _ 5 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 exceeding exceed VERB VBG VerbForm=Ger _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 hemin- hemin- SYM SYM _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binde VERB VBG VerbForm=Ger _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 heat heat NOUN NN Number=Sing _ _ _ _ 30 shock shock NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 whereas whereas SCONJ IN _ _ _ _ _ 36 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha NOUN NN Number=Sing _ _ _ _ 41 results result NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 hemin hemin NOUN NN Number=Sing _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2186 # text = Furthermore, the hemin-induced accumulation of globin, known as a marker of erythroid differentiation, is decreased in cells overexpressing HSF2-beta. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hemin- hemin- SYM NFP _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 marker marker NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 23 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2187 # text = We suggest that HSF2-beta acts as a negative regulator of HSF2 activity during hemin-mediated erythroid differentiation of K562 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 acts act NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HSF2 HSF2 NUM CD NumType=Card _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 hemin- hemin- SYM NFP _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 K562 K562 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2188 # text = Document 003001114 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001114 003001114 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2189 # text = Activation of the human immunodeficiency virus type 1 enhancer is not dependent on NFAT-1. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2190 # text = The function of a putative NFAT-1 site in the human immunodeficiency virus type 1 enhancer has been analyzed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 putative putative ADJ JJ Degree=Pos _ _ _ _ 6 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2191 # text = Activation by the T-cell antigen receptor is minimal in Jurkat cells and is mediated by the kappa B sites. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2192 # text = The putative NFAT-1 region is not required for the response to anti-CD3 or to mitogens in T-cell, B-cell, or monocyte/macrophage leukemia lines, nor is it a cis-acting negative regulatory element. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 nor nor CCONJ CC _ _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 39 negative negative ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2193 # text = Document 003001115 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001115 003001115 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2194 # text = Involvement of intracellular Ca2+ in oxidant-induced NF-kappa B activation. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 4 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2195 # text = In human Jurkat T cells and its subclone Wurzburg cells oxidant challenge elevated [Ca2+]i by mobilizing Ca2+ from intracellular stores. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 8 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 subclone subclone VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 Wurzburg Wurzburg ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 13 challenge challenge NOUN NN Number=Sing _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 mobilizing mobilize VERB VBG VerbForm=Ger _ _ _ _ 22 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 stores store NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2196 # text = In Jurkat cells this effect was rapid and transient, but in Wurzburg cells the response was slow and sustained. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Wurzburg Wurzburg ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 slow slow ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 sustained sustain ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2197 # text = H2O2-induced NF-kappaB activation in Wurzburg cells was not influenced by the presence of extracellular EGTA but was totally inhibited in cells that were loaded with esterified EGTA. 1 H2O2 H2O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 EGTA EGTA PROPN NNP Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 totally totally ADV RB _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 loaded load VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 esterified esterify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 EGTA EGTa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2198 # text = In Jurkat cells that are not sensitive to H2O2-induced NF-kappaB activation, H2O2 potentiated NF-kappaB activation in the presence of sustained high [Ca2+]i following thapsigargin treatment. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 H2O2 H2O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 H2O2 h2o2 PART TO Abbr=Yes _ _ _ _ 17 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ SpaceAfter=No 31 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 following follow VERB VBG VerbForm=Ger _ _ _ _ 34 thapsigargin thapsigargin ADJ JJ Degree=Pos _ _ _ _ 35 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2199 # text = NF-kappaB regulatory effect of alpha-lipoate and N-acetylcysteine appeared to be, at least in part, due to their ability to stabilize elevation of [Ca2+]i following oxidant challenge. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lipoate lipoate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 N- N- PUNCT , _ _ _ _ SpaceAfter=No 12 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 13 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 at at ADV RB _ _ _ _ _ 18 least least ADV RBS Degree=Sup _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 due due ADP IN _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 stabilize stabilize VERB VB VerbForm=Inf _ _ _ _ 28 elevation elevation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 + + SYM SYM _ _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 35 following follow VERB VBG VerbForm=Ger _ _ _ _ 36 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 37 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2200 # text = Results of this study indicate that a sustained elevated [Ca2+]i is a significant factor in oxidant-induced NF-kappaB activation. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 indicate indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 sustained sustain ADJ JJ Degree=Pos _ _ _ _ 9 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2201 # text = Document 003001116 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001116 003001116 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2202 # text = Steel factor affects SCL expression during normal erythroid differentiation. 1 Steel steel NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2203 # text = Steel factor is one of the growth factors that controls the proliferation and differentiation of hematopoietic cells and SCL, also known as Tcl-5 or Tal-1, is a transcription factor involved in erythropoiesis. 1 Steel steel NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 SCL Scl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 Tcl Tcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 5 5 NUM CD NumType=Card _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 involved involved ADJ JJ Degree=Pos _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 erythropoiesis erythropoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2204 # text = In this report, we studied the role of SCL in the proliferation of human peripheral blood burst-forming unit-erythroid (BFU-E) and the effects of Steel factor on SCL expression in proliferating erythroid cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 SCL SCL PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 burst burst NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 forming form VERB VBG VerbForm=Ger _ _ _ _ 21 unit- unit- X GW _ _ _ _ SpaceAfter=No 22 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 E e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 effects effect NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Steel steel NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 in in SCONJ IN _ _ _ _ _ 38 proliferating proliferat VERB VBG VerbForm=Ger _ _ _ _ 39 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2205 # text = BFU-E-derived colonies increase progressively in size, as determined by cell number, from day 7 to day 14 of culture, with the greatest increase in colony size (10-fold expansion) occurring between day 7 and day 10. 1 BFU Bfu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -E -e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 colonies colony NOUN NNS Number=Plur _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 progressively progressively ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 size size NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 number number NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 day day NOUN NN Number=Sing _ _ _ _ 19 7 7 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 day day NOUN NN Number=Sing _ _ _ _ 22 14 14 NUM CD NumType=Card _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 greatest greatest ADJ JJS Degree=Sup _ _ _ _ 29 increase increase NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 colony colony NOUN NN Number=Sing _ _ _ _ 32 size size NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fold fold NOUN NN Number=Sing _ _ _ _ 37 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 40 between between ADP IN _ _ _ _ _ 41 day day NOUN NN Number=Sing _ _ _ _ 42 7 7 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 day day NOUN NN Number=Sing _ _ _ _ 45 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2206 # text = SCL protein levels in BFU-E-derived cells were highest in day 7 cells and decreased progressively from day 7 to day 14 of culture, suggesting an association of SCL with erythroid proliferation. 1 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 E e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 highest highest ADJ JJS Degree=Sup _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 day day NOUN NN Number=Sing _ _ _ _ 15 7 7 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 progressively progressively ADV RB _ _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 day day NOUN NN Number=Sing _ _ _ _ 22 7 7 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 day day NOUN NN Number=Sing _ _ _ _ 25 14 14 NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 association association NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 SCL SCL NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 36 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2207 # text = In contrast, SCL mRNA levels did not decrease significantly between day 7 and day 14 cells, suggesting that posttranscriptional mechanisms are largely responsible for the decrease in SCL protein observed. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 SCL Scl PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 day day NOUN NN Number=Sing _ _ _ _ 13 7 7 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 day day NOUN NN Number=Sing _ _ _ _ 16 14 14 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 largely largely ADV RB _ _ _ _ _ 25 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 decrease decrease NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 SCL SCL PROPN NNP Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2208 # text = The role of SCL in Steel factor-induced erythroid proliferation was then examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SCL SCL PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Steel Steel PROPN NNP Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 then then ADV RB PronType=Dem _ _ _ _ 13 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2209 # text = In BFU-E-derived colonies cultured with Steel factor, colony size was significantly increased compared to control. 1 In in ADP IN _ _ _ _ _ 2 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 E e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 colonies colony NOUN NNS Number=Plur _ _ _ _ 8 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 Steel steel NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 colony colony NOUN NN Number=Sing _ _ _ _ 14 size size NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 control control VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2210 # text = In day 7 and day 10 erythroid precursors cultured with Steel factor, SCL protein was increased significantly compared to control. 1 In in ADP IN _ _ _ _ _ 2 day day NOUN NN Number=Sing _ _ _ _ 3 7 7 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 day day NOUN NN Number=Sing _ _ _ _ 6 10 10 NUM CD NumType=Card _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 precursors precursor NOUN NNS Number=Plur _ _ _ _ 9 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Steel steel NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 SCL SCL PROPN NNP Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 control control VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2211 # text = The increase in SCL protein levels in early erythroid precursors stimulated with Steel factor suggests one mechanism through which Steel factor may enhance normal erythroid proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 precursors precursor NOUN NNS Number=Plur _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Steel steel NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 Steel steel NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2212 # text = SCL mRNA levels assessed by Northern blot in day 7 cells did not increase significantly in response to Steel factor stimulation, suggesting that posttranscriptional mechanisms may also be important in the increase in SCL protein observed in response to Steel. 1 SCL Scl PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 day day NOUN NN Number=Sing _ _ _ _ 10 7 7 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 increase increase VERB VB VerbForm=Inf _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 Steel Steel VERB VB VerbForm=Inf _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 increase increase NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 SCL SCL PROPN NNP Number=Sing _ _ _ _ 36 protein protein ADV RB _ _ _ _ _ 37 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 Steel Steel NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2213 # text = Document 003001117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001117 003001117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2214 # text = Regulation of gene expression with double-stranded phosphorothioate oligonucleotides. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 10 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2215 # text = Alteration of gene transcription by inhibition of specific transcriptional regulatory proteins is necessary for determining how these factors participate in cellular differentiation. 1 Alteration Alteration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 determining determine VERB VBG VerbForm=Ger _ _ _ _ 16 how how ADV WRB PronType=Int _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2216 # text = The functions of these proteins can be antagonized by several methods, each with specific limitations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 antagonized antagonize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 methods method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 each each DET DT _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 limitations limitation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2217 # text = Inhibition of sequence-specific DNA-binding proteins was achieved with double-stranded (ds) phosphorothioate oligonucleotides that contained octamer or kappa B consensus sequences. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 20 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 octamer octamer NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 consensus consensus NOUN NN Number=Sing _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2218 # text = The phosphorothioate oligonucleotides specifically bound either octamer transcription factor or nuclear factor (NF)-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 3 oligonucleotides oligonucleotide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 specifically specifically ADV RB _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2219 # text = The modified oligonucleotides accumulated in cells more effectively than standard ds oligonucleotides and modulated gene expression in a specific manner. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 4 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 effectively effectively ADV RB _ _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 standard standard ADJ JJ Degree=Pos _ _ _ _ 11 ds d NOUN NNS Number=Plur _ _ _ _ 12 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2220 # text = Octamer-dependent activation of a reporter plasmid or NF-kappa B-dependent activation of the human immunodeficiency virus (HIV) enhancer was inhibited when the appropriate phosphorothioate oligonucleotide was added to a transiently transfected B cell line. 1 Octamer Octamer ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 when when ADV WRB PronType=Int _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 31 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 32 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 transiently transiently ADV RB _ _ _ _ _ 38 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2221 # text = Addition of phosphorothioate oligonucleotides that contained the octamer consensus to Jurkat T leukemia cells inhibited interleukin-2 (IL-2) secretion to a degree similar to that observed with a mutated octamer site in the IL-2 enhancer. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 phosphorothioate phosphorothioate ADJ JJ Degree=Pos _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 octamer octamer NOUN NN Number=Sing _ _ _ _ 9 consensus consensus NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 leukemia leukemia PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 degree degree NOUN NN Number=Sing _ _ _ _ 28 similar similar ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2222 # text = The ds phosphorothioate oligonucleotides probably compete for binding of specific transcription factors and may provide anti-viral, immunosuppressive, or other therapeutic effects. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ds d NOUN NNS Number=Plur _ _ _ _ 3 phosphorothioate phosphorothioate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 probably probably ADV RB _ _ _ _ _ 6 compete compete ADJ JJ Degree=Pos _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 anti-viral anti-viral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2223 # text = Document 003001118 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001118 003001118 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2224 # text = Signals and nuclear factors that regulate the expression of interleukin-4 and interleukin-5 genes in helper T cells. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 helper helper ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2225 # text = Mouse thymoma line EL-4 cells produce cytokines such as interleukin (IL)-2, IL-3, IL-4, IL-10, and granulocyte-macrophage colony-stimulating factor in response to phorbol 12-myristate 13-acetate (PMA). 1 Mouse mouse NOUN NN Number=Sing _ _ _ _ 2 thymoma thymoma NOUN NN Number=Sing _ _ _ _ 3 line line NOUN NN Number=Sing _ _ _ _ 4 EL el NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 43 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 myristate myristate NOUN NN Number=Sing _ _ _ _ 46 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT : _ _ _ _ SpaceAfter=No 48 acetate acetate NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2226 # text = EL-4 cells also produce low levels of IL-5 when stimulated by PMA alone; however, cAMP greatly augments PMA-dependent IL-5 production. 1 EL EL INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 produce produce VERB VB VerbForm=Inf _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ _ 13 when when ADV WRB PronType=Int _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ _ 17 alone alone ADV RB _ _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 however however ADV RB _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 cAMP camp PROPN NNP Number=Sing _ _ _ _ 22 greatly greatly ADJ JJ Degree=Pos _ _ _ _ 23 augments augment NOUN NNS Number=Plur _ _ _ _ 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2227 # text = A transient transfection assay revealed that two signals, PMA and cAMP, are required for optimal activation of the IL-5 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2228 # text = In contrast, cAMP almost completely inhibited the PMA-dependent activation of the endogenous IL-2 gene, as well as the transfected IL-2 promoter. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cAMP camp VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 completely completely ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2229 # text = These results indicate that the IL-5 gene is positively regulated by cAMP in a manner opposite to that for the IL-2 gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 positively positively ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 manner manner NOUN NN Number=Sing _ _ _ _ 18 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2230 # text = One of the nuclear factors (NFs) that regulates the response of the IL-5 promoter to cAMP and PMA has properties similar to NF for activated t cell. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NFs Nfs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 cAMP camp PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 PMA PMA PROPN NNP Number=Sing _ _ _ _ 23 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 properties property NOUN NNS Number=Plur _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 NF NF VERB VB VerbForm=Inf _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 t t NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2231 # text = The P sequence of the IL-4 gene, defined as a responsive element for PMA and calcium ionophore (A23187), shares sequence similarity with the NF kappa B and the NF-activated T cell binding sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 shares share NOUN NNS Number=Plur _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 similarity similarity NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell VERB VB VerbForm=Inf _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2232 # text = We attempted to determine whether NF(P), a nuclear factor specific for the P sequence, is related to NF-kappa B and nuclear factor for activated T cell (NF-AT). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 attempted attempt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cell cell PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT At PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2233 # text = In electromobility shift assays both NF-kappa B (P65 or P65/P50 heterodimer) and NF-AT bound to the P sequence. 1 In in ADP IN _ _ _ _ _ 2 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B B NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 P65 P65 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 / / SYM SYM _ _ _ _ SpaceAfter=No 15 P50 P50 NUM CD NumType=Card _ _ _ _ 16 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 AT AT ADV RB _ _ _ _ _ 22 bound bound ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 P p NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2234 # text = However, sequence specificity of NF-AT was more similar to that of NF(P), and only a small amount of P65 was detected in NF(P). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 specificity specificity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 similar similar ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 amount amount NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 P65 P65 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2235 # text = These results indicate that a component or components of NF-AT have the potential to reconstitute NF(P), whereas NF-kappa B alone does not account for NF(P) in Jurkat crude extract. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 component component NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 components component NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 AT AT PRON WDT PronType=Rel _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 potential potential NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 alone alone ADV RB _ _ _ _ _ 29 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 account account VERB VB VerbForm=Inf _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 39 crude crude NOUN NN Number=Sing _ _ _ _ 40 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2236 # text = Taken together, these results suggest that NF-AT-like factors are involved in the regulation of IL-4 and IL-5 genes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT AT ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like SCONJ IN _ _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 5 5 NUM CD NumType=Card _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2237 # text = Document 003001119 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001119 003001119 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2238 # text = Octamer transcription factors and the cell type-specificity of immunoglobulin gene expression. 1 Octamer Octamer ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specificity specificity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2239 # text = Antibodies are produced exclusively in B lymphocytes. 1 Antibodies Antibody NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 exclusively exclusively ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2240 # text = The expression of the antibody-encoding genes, the immunoglobulin 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 antibody antibody ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 encoding encoding NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 2241 # text = (Ig) genes, is also restricted to B cells. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2242 # text = The octamer sequence ATGCAAAT is present in the promoter and the enhancer of Ig genes, and plays an important role in its tissue-specific expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 octamer octamer NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 ATGCAAAT Atgcaaat PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Ig ig ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2243 # text = This sequence motif is a binding site for nuclear proteins, the so-called octamer transcription factors (Oct or OTF factors). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 so so ADV RB _ _ _ _ SpaceAfter=No 14 -called -call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 Oct Oct PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 OTF OTF ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2244 # text = The Oct-1 protein is present in all cell types analyzed so far, whereas Oct-2A and Oct-2B are found mainly in B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 present present ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 types type NOUN NNS Number=Plur _ _ _ _ 12 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 so so ADV RB _ _ _ _ _ 14 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 2B 2b NOUN NN Number=Sing _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 mainly mainly ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2245 # text = All three proteins show the same sequence specificity and binding affinity. 1 All all DET DT _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 same same ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 specificity specificity NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2246 # text = It appears that the B cell-specific expression of Ig genes is mediated at least in part by cell type-specific 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Ig ig PROPN NNP Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2247 # text = Oct factors, and that there are both quantitative and qualitative differences between Oct-1 and Oct-2 factors. 1 Oct Oct PROPN NNP Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 there there PRON EX _ _ _ _ _ 7 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 12 differences difference NOUN NNS Number=Plur _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2248 # text = Recently, a number of other octamer factor variants were identified. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 number number NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 variants variant NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2249 # text = Many of these may be created by alternative splicing of a primary transcript of one Oct factor gene and may serve a specific function in the fine tuning of gene expression. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 created create VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 9 splicing splicing NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 primary primary ADJ JJ Degree=Pos _ _ _ _ 13 transcript transcript NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 serve serve VERB VB VerbForm=Inf _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 fine fine ADJ JJ Degree=Pos _ _ _ _ 28 tuning tuning NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 gene gene ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2250 # text = Document 003001120 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001120 003001120 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2251 # text = Epstein-Barr virus binding to CD21 activates the initial viral promoter via NF-kappaB induction. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 CD21 CD21 PROPN NNP Number=Sing _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 initial initial ADJ JJ Degree=Pos _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2252 # text = Epstein-Barr virus (EBV), an oncogenic human herpesvirus, binds to and infects normal human B lymphocytes via CD21, the CR2 complement receptor. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 CD21 CD21 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CR2 Cr2 NOUN NN Number=Sing _ _ _ _ 27 complement complement NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2253 # text = Studies of the mechanisms that enable EBV to infect nonactivated, noncycling B cells provide compelling evidence for a sequence of events in which EBV binding to CD21 on purified resting human B cells rapidly activates the NF-kappaB transcription factor, which, in turn, binds to and mediates transcriptional activation of Wp, the initial viral latent gene promoter. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 enable enable VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 infect infect VERB VB VerbForm=Inf _ _ _ _ 10 nonactivated nonactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 noncycling noncycl VERB VBG VerbForm=Ger _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 compelling compelling ADJ JJ Degree=Pos _ _ _ _ 17 evidence evidence NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 events event NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 EBV EBV PROPN NNP Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 CD21 CD21 PROPN NNP Number=Sing _ _ _ _ 29 on on ADV RB _ _ _ _ _ 30 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 resting rest VERB VBG VerbForm=Ger _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 rapidly rapidly ADV RB _ _ _ _ _ 36 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 binds bind NOUN NNS Number=Plur _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 Wp Wp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 initial initial ADJ JJ Degree=Pos _ _ _ _ 60 viral viral ADJ JJ Degree=Pos _ _ _ _ 61 latent latent ADJ JJ Degree=Pos _ _ _ _ 62 gene gene NOUN NN Number=Sing _ _ _ _ 63 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2254 # text = Thus, EBV binding to its cellular receptor on resting B cells triggers an NF-kappaB-dependent intracellular signaling pathway which is required for infection. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 on on SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 triggers trigger NOUN NNS Number=Plur _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2255 # text = Document 003001121 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001121 003001121 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2256 # text = An enhancer-blocking element between alpha and delta gene segments within the human T cell receptor alpha/delta locus. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 blocking block VERB VBG VerbForm=Ger _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 delta delof NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 segments segment NOUN NNS Number=Plur _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 19 delta delta PROPN NNP Number=Sing _ _ _ _ 20 locus locus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2257 # text = T cell receptor (TCR) alpha and delta gene segments are organized within a single genetic locus but are differentially regulated during T cell development. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 delta delof NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 segments segment NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 organized organize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 single single ADJ JJ Degree=Pos _ _ _ _ 17 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 18 locus locus NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 differentially differentially ADV RB _ _ _ _ _ 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 during during ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2258 # text = An enhancer-blocking element (BEAD-1, for blocking element alpha/delta 1) was localized to a 2.0-kb region 3' of TCR delta gene segments and 5' of TCR alpha joining gene segments within this locus. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 blocking blocking NOUN NN Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 BEAD Bead NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 blocking block VERB VBG VerbForm=Ger _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 alpha/ alpha/ PUNCT HYPH _ _ _ _ SpaceAfter=No 15 delta delta NOUN NN Number=Sing _ _ _ _ 16 1 1 X LS _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 2.0 2.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kb kb NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 TCR TCR PROPN NNP Number=Sing _ _ _ _ 30 delta delta PART TO Abbr=Yes _ _ _ _ 31 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 segments segment NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ' ' NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 TCR Tcr NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 joining join VERB VBG VerbForm=Ger _ _ _ _ 40 gene gene ADJ JJ Degree=Pos _ _ _ _ 41 segments segment NOUN NNS Number=Plur _ _ _ _ 42 within within ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 locus. locus. NOUN NN Number=Sing _ _ _ _ # sent_id = 2259 # text = BEAD-1 blocked the ability of the TCR delta enhancer (Edelta) to activate a promoter when located between the two in a chromatin-integrated construct. 1 BEAD Bead ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TCR TCR PROPN NNP Number=Sing _ _ _ _ 10 delta delta PROPN NNP Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Edelta Edelta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 activate activate VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 chromatin- chromatin- SYM SYM _ _ _ _ SpaceAfter=No 27 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2260 # text = We propose that BEAD-1 functions as a boundary that separates the TCR alpha/delta locus into distinct regulatory domains controlled by Edelta and the TCR alpha enhancer, and that it prevents Edelta from opening the chromatin of the TCR alpha joining gene segments for VDJ recombination at an early stage of T cell development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 BEAD Bead NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 functions function NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 boundary boundary NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 separates separate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TCR Tcr NOUN NN Number=Sing _ _ _ _ 15 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 delta delof PROPN NNP Number=Sing _ _ _ _ 17 locus locus ADV RB _ _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 domains domains NOUN NNS Number=Plur _ _ _ _ 22 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 Edelta Edelta PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 Edelta Edelta PROPN NNP Number=Sing _ _ _ _ 36 from from SCONJ IN _ _ _ _ _ 37 opening open VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 TCR TCR PROPN NNP Number=Sing _ _ _ _ 43 alpha alpha PROPN NNP Number=Sing _ _ _ _ 44 joining join VERB VBG VerbForm=Ger _ _ _ _ 45 gene gene ADJ JJ Degree=Pos _ _ _ _ 46 segments segment NOUN NNS Number=Plur _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 VDJ VDJ PROPN NNP Number=Sing _ _ _ _ 49 recombination recombination NOUN NN Number=Sing _ _ _ _ 50 at at ADP IN _ _ _ _ _ 51 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 early early ADJ JJ Degree=Pos _ _ _ _ 53 stage stage NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 T t PROPN NNP Number=Sing _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2261 # text = Document 003001122 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001122 003001122 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2262 # text = Coupling of a signal response domain in I kappa B alpha to multiple pathways for NF-kappa B activation. 1 Coupling Coupling NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 signal signal ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B B ADJ JJ Degree=Pos _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2263 # text = The eukaryotic transcription factor NF-kappa B plays a central role in the induced expression of human immunodeficiency virus type 1 and in many aspects of the genetic program mediating normal T-cell activation and growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 many many ADJ JJ Degree=Pos _ _ _ _ 26 aspects aspect NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 30 program program NOUN NN Number=Sing _ _ _ _ 31 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2264 # text = The nuclear activity of NF-kappa B is tightly regulated from the cytoplasmic compartment by an inhibitory subunit called I kappa B alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tightly tightly ADV RB _ _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 compartment compartment NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 subunit subunit NOUN NN Number=Sing _ _ _ _ 20 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa X FW Foreign=Yes _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2265 # text = This cytoplasmic inhibitor is rapidly phosphorylated and degraded in response to a diverse set of NF-kappa B-inducing agents, including T-cell mitogens, proinflammatory cytokines, and viral transactivators such as the Tax protein of human T-cell leukemia virus type 1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 3 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rapidly rapidly ADV RB _ _ _ _ _ 6 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 14 set set NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 30 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 viral viral ADJ JJ Degree=Pos _ _ _ _ 34 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 35 such such ADJ JJ Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 Tax tax NOUN NN Number=Sing _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 45 virus virus NOUN NN Number=Sing _ _ _ _ 46 type type NOUN NN Number=Sing _ _ _ _ 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2266 # text = To explore these I kappa B alpha-dependent mechanisms for NF-kappa B induction, we identified novel mutants of I kappa 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B benefit PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 novel novel ADJ JJ Degree=Pos _ _ _ _ 21 mutants mutant NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2267 # text = B alpha that uncouple its inhibitory and signal-transducing functions in human T lymphocytes. 1 B b NOUN NN Number=Sing _ _ _ _ 2 alpha alpha ADP IN _ _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 uncouple uncouple NOUN NN Number=Sing _ _ _ _ 5 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2268 # text = Specifically, removal of the N-terminal 36 amino acids of I kappa B alpha failed to disrupt its ability to form latent complexes with NF-kappa B in the cytoplasm. 1 Specifically specifically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 removal removal NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 36 36 NUM CD NumType=Card _ _ _ _ 9 amino amino DET DT _ _ _ _ _ 10 acids acid NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 ability ability NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 form form VERB VB VerbForm=Inf _ _ _ _ 23 latent latent ADJ JJ Degree=Pos _ _ _ _ 24 complexes complexe NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2269 # text = However, this deletion mutation prevented the induced phosphorylation, degradative loss, and functional release of 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 degradative degradative ADJ JJ Degree=Pos _ _ _ _ 12 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 functional functional ADJ JJ Degree=Pos _ _ _ _ 16 release release NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ # sent_id = 2270 # text = I kappa B alpha from NF-kappa B in Tax-expressing cells. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 expressing express VERB VBG VerbForm=Ger _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2271 # text = Alanine substitutions introduced at two serine residues positioned within this N-terminal regulatory region of I kappa B alpha also yielded constitutive repressors that escaped from Tax-induced turnover and that potently inhibited immune activation pathways for NF-kappa B induction, including those initiated from antigen and cytokine receptors. 1 Alanine Alanine NUM CD NumType=Card _ _ _ _ 2 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ _ 7 residues residue NOUN NNS Number=Plur _ _ _ _ 8 positioned position VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ _ 19 alpha alpha PROPN NNP Number=Sing _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 repressors repressor NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 escaped escape VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 turnover turnover NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 potently potently ADV RB _ _ _ _ _ 34 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 immune immune ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 pathways pathway NOUN NNS Number=Plur _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 including include VERB VBG VerbForm=Ger _ _ _ _ 46 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 47 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 from from ADP IN _ _ _ _ _ 49 antigen antigen NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 52 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2272 # text = In contrast, introduction of a phosphoserine mimetic at these sites rectified this functional defect, a finding consistent with a causal linkage between the phosphorylation status and proteolytic stability of this cytoplasmic inhibitor. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 introduction introduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 phosphoserine phosphoserine NOUN NN Number=Sing _ _ _ _ 8 mimetic mimetic ADJ JJ Degree=Pos _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 rectified rectify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 finding finding NOUN NN Number=Sing _ _ _ _ 19 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 causal causal ADJ JJ Degree=Pos _ _ _ _ 23 linkage linkage NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 status status NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 30 stability stability NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 34 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2273 # text = Together, these in vivo studies define a critical signal response domain in I kappa B alpha that coordinately controls the biologic activities of I kappa B alpha and NF-kappa B in response to viral and immune stimuli. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 I I PROPN NNP Number=Sing _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha ADP IN _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 coordinately coordinately ADV RB _ _ _ _ _ 20 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 viral viral ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2274 # text = Document 003001123 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001123 003001123 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2275 # text = Two distinct signal transmission pathways in T lymphocytes are inhibited by complexes formed between an immunophilin and either FK506 or rapamycin. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transmission transmission NOUN NN Number=Sing _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 complexes complexe NOUN NNS Number=Plur _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 either either CCONJ CC _ _ _ _ _ 19 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2276 # text = Proliferation and immunologic function of T lymphocytes are initiated by signals from the antigen receptor that are inhibited by the immunosuppressant FK506 but not by its structural analog, rapamycin. 1 Proliferation proliferation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 22 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 structural structural ADJ JJ Degree=Pos _ _ _ _ 28 analog analog NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2277 # text = On the other hand, interleukin 2 (IL-2)-induced signals are blocked by rapamycin but not by FK506. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2278 # text = Remarkably, these two drugs inhibit each other's actions, raising the possibility that both act by means of a common immunophilin (immunosuppressant binding protein). 1 Remarkably remarkably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 drugs drug NOUN NNS Number=Plur _ _ _ _ 6 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 actions action NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 raising rais VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 possibility possibility NOUN NN Number=Sing _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 act act NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 means means NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 immunophilin immunophilin NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2279 # text = We find that the dissociation constant of rapamycin to the FK506 binding protein FKBP (Kd = 0.2 nM) is close to the dissociation constant of FK506 to FKBP (Kd = 0.4 nM) and to their effective biologic inhibitory concentrations. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 6 constant constant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Kd K PROPN NNP Number=Sing _ _ _ _ 17 = = SYM SYM _ _ _ _ _ 18 0.2 0.2 NUM CD NumType=Card _ _ _ _ 19 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 close close ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 26 constant constant NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Kd K PROPN NNP Number=Sing _ _ _ _ 33 = = SYM SYM _ _ _ _ _ 34 0.4 0.4 NUM CD NumType=Card _ _ _ _ 35 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 effective effective ADJ JJ Degree=Pos _ _ _ _ 41 biologic biologic NOUN NN Number=Sing _ _ _ _ 42 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 43 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2280 # text = However, an excess of rapamycin is needed to revert FK506-mediated inhibition of IL-2 production, apoptosis, and transcriptional activation of NF-AT, a T-cell-specific transcription factor necessary for IL-2 gene activation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 excess excess NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 revert revert VERB VB VerbForm=Inf _ _ _ _ 11 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2281 # text = Similarly, an excess of FK506 is needed to revert rapamycin-mediated inhibition of IL-2-induced proliferation. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 excess excess NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 revert revert VERB VB VerbForm=Inf _ _ _ _ 11 rapamycin- rapamycin- PUNCT : _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2282 # text = The drug concentrations required for antagonism may be explained by the relative affinity of the drugs to, and by the abundance of, the immunophilin FKBP. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 drug drug NOUN NN Number=Sing _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 relative relative ADJ JJ Degree=Pos _ _ _ _ 13 affinity affinity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 drugs drug NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 abundance abundance NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 27 FKBP Fkbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2283 # text = FKBP has been shown to catalyze the interconversion of the cis- and trans-rotamers of the peptidyl-prolyl amide bond of peptide substrates; here we show that rapamycin, like FK506, is a potent inhibitor of the rotamase activity of FKBP 1 FKBP FKBP SYM NFP _ _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 catalyze catalyze VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interconversion interconversion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 rotamers rotamer NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 peptidyl peptidyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 prolyl prolyl NOUN NN Number=Sing _ _ _ _ 22 amide amide NOUN NN Number=Sing _ _ _ _ 23 bond bond NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 peptide peptide NOUN NN Number=Sing _ _ _ _ 26 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 here here ADV RB PronType=Dem _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 like like ADP IN _ _ _ _ _ 35 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 potent potent NOUN NN Number=Sing _ _ _ _ 40 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 rotamase rotamase NOUN NN Number=Sing _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ # sent_id = 2284 # text = (Ki = 0.2 nM). 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ki Ki PROPN NNP Number=Sing _ _ _ _ 3 = = SYM SYM _ _ _ _ _ 4 0.2 0.2 NUM CD NumType=Card _ _ _ _ 5 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 2285 # text = Neither FKBP binding nor inhibition of rotamase activity of FKBP alone is sufficient to explain the biologic actions of these drugs. 1 Neither neither DET DT _ _ _ _ _ 2 FKBP Fkbp NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 nor nor ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 rotamase rotamase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 11 alone alone ADV RB _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 explain explain VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 18 actions action NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2286 # text = Rather, these findings suggest that immunophilin bound to FK506 interferes with antigen receptor-induced signals, while rapamycin bound to the immunophilin interferes with IL-2-induced signals. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 FK506 FK506 NUM CD NumType=Card _ _ _ _ 11 interferes interfere NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immunophilin immunophilin NOUN NN Number=Sing _ _ _ _ 25 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2287 # text = Document 003001124 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001124 003001124 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2288 # text = Constitutive activation of different Jak tyrosine kinases in human T cell leukemia virus type 1 (HTLV-1) tax protein or virus-transformed cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 Jak Jak PROPN NNP Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 tax tax NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2289 # text = HTLV-1 infection causes an adult T cell leukemia in humans. 1 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 infection infection NOUN NN Number=Sing _ _ _ _ 5 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 adult adult ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2290 # text = The viral encoded protein tax, is thought to play an important role in oncogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 play play VERB VB VerbForm=Inf _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 oncogenesis oncogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2291 # text = Our previous data obtained from a tax transgenic mouse model revealed that tax transforms mouse fibroblasts but not thymocytes, despite comparable levels of tax expression in both tissues. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tax tax NOUN NN Number=Sing _ _ _ _ 8 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 model model NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 tax tax NOUN NN Number=Sing _ _ _ _ 14 transforms transform NOUN NNS Number=Plur _ _ _ _ 15 mouse mouse NOUN NN Number=Sing _ _ _ _ 16 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 despite despite ADP IN _ _ _ _ _ 22 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 tax tax NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2292 # text = Constitutive tyrosine phosphorylation of a 130-kD protein(s) was observed in the tax transformed fibroblast B line and in HTLV-1 transformed human lymphoid lines, but not in thymocytes from Thy-tax transgenic mice. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 130 130 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kD kd NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 tax tax NOUN NN Number=Sing _ _ _ _ 18 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 30 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 Thy thy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 tax tax NOUN NN Number=Sing _ _ _ _ 40 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 41 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2293 # text = Phosphotyrosine immunoprecipitation followed by Western blot analysis with a set of Jak kinase specific antibodies, identified p130 as Jak2 in the tax transformed mouse fibroblastic cell line and Jak3 in HTLV-1 transformed human T cell lines. 1 Phosphotyrosine Phosphotyrosine NOUN NN Number=Sing _ _ _ _ 2 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 Western western ADJ JJ Degree=Pos _ _ _ _ 6 blot blot NOUN NN Number=Sing _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 set set NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Jak Jak PROPN NNP Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 p130 p130 NUM CD NumType=Card _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 tax tax NOUN NN Number=Sing _ _ _ _ 24 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ _ 26 fibroblastic fibroblastic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2294 # text = Phosphorylation of Jak2 in tax transformed cells resulted from high expression of IL-6. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ _ 6 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2295 # text = Tyrosine phosphorylation of this protein could also be induced in Balb/c3T3 cells using a supernatant from the B line, which was associated with induction of cell proliferation. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Balb/ Balb/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 c3T3 c3T3 NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2296 # text = Both phosphorylation and proliferation were inhibited by IL-6 neutralizing antibodies. 1 Both both DET DT _ _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2297 # text = Constitutive phosphorylation of Jak kinases may facilitate tumor growth in both HTLV-1 infected human T cells and the transgenic mouse model. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak Jak PROPN NNP Number=Sing _ _ _ _ 5 kinases kinase NOUN NNS Number=Plur _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 growth growth NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2298 # text = Document 003001125 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001125 003001125 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2299 # text = Regulation of interleukin-1 beta production by glucocorticoids in human monocytes: 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ # sent_id = 2300 # text = the mechanism of action depends on the activation signal. 1 the the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2301 # text = Glucocorticoids are known to downregulate interleukin-1 beta production in monocytic cells by two different mechanims: direct inhibition of the gene transcription and destabilization of the preformed interleukin-1 beta mRNA. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 downregulate downregulate VERB VB VerbForm=Inf _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 mechanims mechanim NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 direct direct ADJ JJ Degree=Pos _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 destabilization destabilization NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2302 # text = Now we have examined the effect of the nature of the monocyte activating signal on these two inhibitory mechanims. 1 Now now ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nature nature NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 13 activating activat VERB VBG VerbForm=Ger _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 mechanims mechanim NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2303 # text = When human monocytes were preincubated with dexamethasone for 1 hour and then stimulated either with bacterial lipopolysaccharide or phorbol myristate, it was found that dexamethasone inhibited the lipopolysaccharide-induced interleukin-1 beta protein production, but the phorbol myristate-induced production was increased 3-10 fold. 1 When when ADV WRB PronType=Int _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 hour hour NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 then then ADV RB PronType=Dem _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 27 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 42 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 10 10 NUM CD NumType=Card _ _ _ _ 51 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2304 # text = This difference was also seen at the mRNA level. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2305 # text = When dexamethasone was added to the cultures 3 hours after the stimulators, it clearly decreased the interleukin-1 beta mRNA levels regardless of the stimulator used (although the effect was clearly weaker on the PMA-induced mRNA). 1 When when ADV WRB PronType=Int _ _ _ _ 2 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cultures culture NOUN NNS Number=Plur _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 stimulators stimulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 clearly clearly ADV RB _ _ _ _ _ 16 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa SYM SYM _ _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 regardless regardless ADV RB _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 28 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 although although SCONJ IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 clearly clearly ADV RB _ _ _ _ _ 35 weaker weaker ADJ JJR Degree=Cmp _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2306 # text = Thus these data suggest that the phorbol myristate-induced signal (prolonged protein kinase C activation?) cannot be inhibited by prior incubation with dexamethasone and it also protects the induced mRNA for the degradative action of dexamethasone. 1 Thus thus ADV RB _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ? ? PUNCT . _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 21 not not PART RB _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 prior prior ADJ JJ Degree=Pos _ _ _ _ 26 incubation incubation NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 also also ADV RB _ _ _ _ _ 32 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 degradative degradative ADJ JJ Degree=Pos _ _ _ _ 39 action action NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2307 # text = Document 003001126 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001126 003001126 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2308 # text = Heat shock induces HIV-1 replication in chronically infected promyelocyte cell line OM10.1. 1 Heat heat ADJ JJ Degree=Pos _ _ _ _ 2 shock shock NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 replication replication NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 chronically chronically ADV RB _ _ _ _ _ 10 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 OM Om NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 10.1 10.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2309 # text = A long period of clinical latency before development of symptoms is characteristic of human immunodeficiency virus type 1 (HIV-1) infection. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 period period NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 6 latency latency NOUN NN Number=Sing _ _ _ _ 7 before before ADP IN _ _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2310 # text = OM10.1, a promyelocyte cell line latently infected with HIV-1, has been developed as a model for studying the mechanism of viral latency and the activation of virus expression. 1 OM Om ADP IN _ _ _ _ SpaceAfter=No 2 10.1 10.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promyelocyte promyelocyte ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 latently latently ADV RB _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 developed develop VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 model model NOUN NN Number=Sing _ _ _ _ 21 for for SCONJ IN _ _ _ _ _ 22 studying study VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 latency latency NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2311 # text = We found that this latently infected cell line with heat shock at 42 degrees C for 2 h resulted in a high level of HIV-1 production without addition of any cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 latently latently ADV RB _ _ _ _ _ 6 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 42 42 NUM CD NumType=Card _ _ _ _ 14 degrees degree NOUN NNS Number=Plur _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 without without ADP IN _ _ _ _ _ 30 addition addition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 any any DET DT _ _ _ _ _ 33 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2312 # text = The mechanism of activation was analyzed by using anti-TNF-alpha antibody and various inhibitors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 antibody antibody NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2313 # text = Although the TNF-alpha level in culture supernatants was below the sensitivity of an ELISA assay system, addition of anti-TNF-alpha antibody in culture medium could partially suppress the heat shock induced HIV-1 production. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 culture culture NOUN NN Number=Sing _ _ _ _ 9 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 below below ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 17 assay assay NOUN NN Number=Sing _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 antibody antibody NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 culture culture NOUN NN Number=Sing _ _ _ _ 28 medium medium NOUN NN Number=Sing _ _ _ _ 29 could could AUX MD VerbForm=Fin _ _ _ _ 30 partially partially ADV RB _ _ _ _ _ 31 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 heat heat NOUN NN Number=Sing _ _ _ _ 34 shock shock NOUN NN Number=Sing _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2314 # text = Staurosporine (PKC inhibitor), pentoxifylline (NF-kappa B inhibitor), and Ro5-3335 (HIV-1 1 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PKC PKC PROPN NNP Number=Sing _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Ro5-3335 Ro5-3335 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 2315 # text = Tat inhibitor) also inhibited significantly the heat shock induced virus activation. 1 Tat Tat ADJ JJ Degree=Pos _ _ _ _ 2 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 heat heat NOUN NN Number=Sing _ _ _ _ 9 shock shock NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2316 # text = In particular, staurosporine achieved approximately 90% inhibition of the HIV-1 antigen expression in heat shock-treated OM10.1 at a non-toxic concentration. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 staurosporine staurosporine PRON PRP _ _ _ _ _ 5 achieved achieve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 approximately approximately ADV RB _ _ _ _ _ 7 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 % % SYM NN Number=Sing _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 antigen antigen NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 heat heat NOUN NN Number=Sing _ _ _ _ 19 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 OM10.1 Om10.1 NUM CD NumType=Card _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 non-toxic non-toxic ADJ JJ Degree=Pos _ _ _ _ 26 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2317 # text = Although the mechanism of HIV-1 activation with heat shock has not been fully elucidated yet, it is presumed PKC plays an important role in HIV-1 activation. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 fully fully ADV RB _ _ _ _ _ 16 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 yet yet ADV RB _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 23 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2318 # text = Thus, the present observations will provide a further insight into the pathogenesis of HIV-1 infections. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 will will AUX MD VerbForm=Fin _ _ _ _ 7 provide provide VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 further further ADJ JJ Degree=Pos _ _ _ _ 10 insight insight NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2319 # text = Document 003001127 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001127 003001127 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2320 # text = Cellular and molecular mechanisms of IL-5 synthesis in atopic diseases: a study with allergen-specific human helper T cells. 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 12 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 study study NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 allergen allergen NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 helper helper NOUN NN Number=Sing _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2321 # text = BACKGROUND: Cytokines produced by helper T cells are intimately involved in chronic allergic diseases associated with eosinophilic inflammation. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Cytokines Cytokine NOUN NNS Number=Plur _ _ _ _ 4 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 helper helper ADJ JJR Degree=Cmp _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 intimately intimately ADV RB _ _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 14 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 15 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2322 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 2323 # text = We investigated the production of IL-5, a potent growth factor and chemotactic factor for eosinophils, by CD4+ T lymphocytes in patients with asthma. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 potent potent NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 T t NUM CD NumType=Card _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 patients patient NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2324 # text = METHODS: Allergen-specific 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Allergen Allergen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -specific -specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2325 # text = T cell clones and T cell hybridomas were established from the peripheral blood lymphocytes of patients with asthma, and the responses to various stimuli were determined. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cell cell PROPN NNP Number=Sing _ _ _ _ 7 hybridomas hybridoma AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 determined determin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2326 # text = RESULTS: After nonspecific stimulation, IL-5 production by CD4+ T cells from both atopic and nonatopic subjects with asthma was significantly enhanced compared with that by cells from healthy controls. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 After after ADP IN _ _ _ _ _ 4 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 5 5 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 21 subjects subject NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 34 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2327 # text = Peripheral blood mononuclear cells from atopic asthma patients both proliferated and produced IL-5 after incubation with mite allergen, suggesting that mite-specific helper T cells were involved in the eosinophilic inflammation of atopic asthma. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 7 asthma asthma NOUN NN Number=Sing _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 proliferated proliferate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 incubation incubation NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 mite mite NOUN NN Number=Sing _ _ _ _ 20 allergen allergen NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 mite mite ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 helper helper NOUN NN Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 involved involved ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 35 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 38 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2328 # text = A human IL-5 promoter/enhancer luciferase gene construct transfected into IL-5-producing T cell clones was clearly transcribed after stimulation, indicating that the 515 base pair IL-5 gene segment upstream of the coding region was sufficient to respond to activating signals in human helper T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 construct construct NOUN NN Number=Sing _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 producing produce VERB VBG VerbForm=Ger _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 clones clone NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 clearly clearly ADV RB _ _ _ _ _ 24 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 after after ADP IN _ _ _ _ _ 26 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 515 515 NUM CD NumType=Card _ _ _ _ 32 base base NOUN NN Number=Sing _ _ _ _ 33 pair pair NOUN NN Number=Sing _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 5 5 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 segment segment NOUN NN Number=Sing _ _ _ _ 39 upstream upstream NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 coding coding NOUN NN Number=Sing _ _ _ _ 43 region region NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 respond respond VERB VB VerbForm=Inf _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 activating activating VERB VBG VerbForm=Ger _ _ _ _ 50 signals signal NOUN NNS Number=Plur _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 human human ADJ JJ Degree=Pos _ _ _ _ 53 helper helper NOUN NN Number=Sing _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 2329 # text = The same gene segment was not transcribed in IL-5-nonproducing T cell clones, suggesting that human T cell IL-5 synthesis is regulated at the transcriptional level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 segment segment NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 nonproducing nonproduce VERB VBG VerbForm=Ger _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2330 # text = Experiments with T cell hybridomas confirmed these findings and suggested that a unique transcription factor may be essential for human IL-5 gene transcription. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell PROPN NNP Number=Sing _ _ _ _ 5 hybridomas hybridoma AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 findings finding NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 unique unique ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2331 # text = CONCLUSION: Enhanced IL-5 production by helper T cells seems to cause the eosinophilic inflammation of both atopic and nonatopic asthma. 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 helper helper ADJ JJR Degree=Cmp _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 17 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2332 # text = Elucidation of IL-5-specific regulatory mechanisms may facilitate the development of novel treatments for allergic diseases associated with eosinophilic inflammation. 1 Elucidation Elucidation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 novel novel NOUN NN Number=Sing _ _ _ _ 16 treatments treatment NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 19 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 23 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2333 # text = Document 003001128 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001128 003001128 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2334 # text = 3-deazaadenosine, a S-adenosylhomocysteine hydrolase inhibitor, has dual effects on NF-kappaB regulation. 1 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 deazaadenosine deazaadenosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 S-adenosylhomocysteine S-adenosylhomocysteine ADJ JJ Degree=Pos _ _ _ _ 7 hydrolase hydrolase NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 dual dual ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2335 # text = Inhibition of NF-kappaB transcriptional activity and promotion of IkappaBalpha degradation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 promotion promotion NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 12 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2336 # text = Previously we reported that 3-deazaadenosine (DZA), a potent inhibitor and substrate for S-adenosylhomocysteine hydrolase inhibits bacterial lipopolysaccharide-induced transcription of tumor necrosis factor-alpha and interleukin-1beta in mouse macrophage RAW 264.7 cells. 1 Previously previously ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 deazaadenosine deazaadenosine NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 DZA DZA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 potent potent NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 substrate substrate NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 S- S- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 adenosylhomocysteine adenosylhomocysteine NOUN NN Number=Sing _ _ _ _ 20 hydrolase hydrolase NOUN NN Number=Sing _ _ _ _ 21 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 22 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 23 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 beta beta NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mouse mouse NOUN NN Number=Sing _ _ _ _ 39 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 40 RAW RAW PROPN NNP Number=Sing _ _ _ _ 41 264.7 264.7 NUM CD NumType=Card _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2337 # text = In this study, we demonstrate the effects of DZA on nuclear factor-kappaB (NF-kappaB) regulation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 DZA DZa NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -kappaB -kappaB NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2338 # text = DZA inhibits the transcriptional activity of NF-kappaB through the hindrance of p65 (Rel-A) phosphorylation without reduction of its nuclear translocation and DNA binding activity. 1 DZA DZA PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 hindrance hindrance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p65 p65 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 without without ADP IN _ _ _ _ _ 22 reduction reduction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2339 # text = The inhibitory effect of DZA on NF-kappaB transcriptional activity is potentiated by the addition of homocysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 DZA DZA PROPN NNP Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 homocysteine homocysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2340 # text = Taken together, DZA promotes the proteolytic degradation of IkappaBalpha, but not IkappaBbeta, resulting in an increase of DNA binding activity of NF-kappaB in the nucleus in the absence of its transcriptional activity in RAW 264.7 cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 DZA DZA PROPN NNP Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 resulting result VERB VBG VerbForm=Ger _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binde VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 absence absence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 RAW RAW PROPN NNP Number=Sing _ _ _ _ 40 264.7 264.7 NUM CD NumType=Card _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2341 # text = The reduction of IkappaBalpha by DZA is neither involved in IkappaB kinase complex activation nor modulated by the addition of homocysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 DZA DZA PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 neither neither ADV RB _ _ _ _ _ 9 involved involve ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 IkappaB Ikappab ADJ JJ Degree=Pos _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 nor nor CCONJ CC _ _ _ _ _ 16 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 homocysteine homocysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2342 # text = This study strongly suggests that DZA may be a potent drug for the treatment of diseases in which NF-kappaB plays a central pathogenic role, as well as a useful tool for studying the regulation and physiological functions of NF-kappaB. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 DZA DZA PROPN NNP Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 potent potent NOUN NN Number=Sing _ _ _ _ 11 drug drug NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 diseases disease NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 central central ADJ JJ Degree=Pos _ _ _ _ 25 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 as as ADV RB _ _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 useful useful ADJ JJ Degree=Pos _ _ _ _ 33 tool tool NOUN NN Number=Sing _ _ _ _ 34 for for SCONJ IN _ _ _ _ _ 35 studying study VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 40 functions function NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2343 # text = Document 003001129 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001129 003001129 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2344 # text = Rel/NF-kappaB can trigger the Notch signaling pathway by inducing the expression of Jagged1, a ligand for Notch receptors. 1 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 NF-kappaB NF-kappaB PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Notch notch NOUN NN Number=Sing _ _ _ _ 8 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ligand ligand NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 Notch notch PROPN NNP Number=Sing _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2345 # text = Jagged1 belongs to the DSL family of ligands for Notch receptors that control the proliferation and differentiation of various cell lineages. 1 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 2 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DSL dsl NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ligands ligand NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 Notch notch ADJ JJ Degree=Pos _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 various various ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2346 # text = However, little is known about the transcription factors that regulate its expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2347 # text = Here, we show that Jagged1 is a Rel/NF-kappaB-responsive gene. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Rel/ rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2348 # text = Both c-Rel and RelA induced jagged1 gene expression, whereas a mutant defective for transactivation did not. 1 Both both DET DT _ _ _ _ _ 2 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Rel Rel NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 RelA RelA NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 jagged jag VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 defective defective NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2349 # text = Importantly, jagged1 transcripts were also upregulated by endogenous NF-kappaB activation and this effect was inhibited by a dominant mutant of IkappaBalpha, a physiological inhibitor of NF-kappaB. 1 Importantly importantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 jagged jag VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2350 # text = Cell surface expression of Jagged1 in c-Rel-expressing cell monolayers led to a functional interaction with lymphocytes expressing the Notch1/TAN-1 receptor. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 surface surface NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -expressing -expresse NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 13 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 expressing express VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Notch1 notch1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 TAN Tan NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2351 # text = This correlated with the initiation of signaling downstream of Notch, as evidenced by increased levels of HES-1 transcripts in co-cultivated T cells and of CD23 transcripts in co-cultivated B cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 initiation initiation NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 8 downstream downstream NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Notch notch PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HES he NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 co-cultivated co-cultivated ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 29 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 co-cultivated co-cultivated ADJ JJ Degree=Pos _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2352 # text = Consistent with its Rel/NF-kappaB-dependent induction, Jagged1 was found to be highly expressed in splenic B cells where c-Rel is expressed constitutively. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 Rel/NF Rel/NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 highly highly ADV RB _ _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 where where ADV WRB PronType=Rel _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Rel Rel PROPN NNP Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 constitutively constitutively ADV RB _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2353 # text = These results demonstrate that c-Rel can trigger the Notch signaling pathway in neighboring cells by inducing jagged1 gene expression, and suggest a role for Jagged1 in B-cell activation, differentiation or function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Notch notch NOUN NN Number=Sing _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 neighboring neighbore VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 jagged jag VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2354 # text = These findings also highlight the potential for an interplay between the Notch and NF-kappaB signaling pathways in the immune system. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 highlight highlight VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 potential potential NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 interplay interplay NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Notch notch PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2355 # text = Document 003001130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001130 003001130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2356 # text = IFN-gamma priming of monocytes enhances LPS-induced TNF production by augmenting both transcription and MRNA stability. 1 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 priming priming NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 enhances enhance NOUN NNS Number=Plur _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 MRNA MRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 19 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2357 # text = The induction of cytokine expression in monocytes/macrophages by bacterial endotoxin or lipopolysaccharide is a critical, highly regulated host defence response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 highly highly ADV RB _ _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 host host NOUN NN Number=Sing _ _ _ _ 22 defence defence NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2358 # text = The augmentation of LPS responses by interferon gamma (IFN-gamma), referred to as priming, is well established. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 5 responses response NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 referred refer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 priming priming VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2359 # text = However, the mechanism(s) by which priming occurs is poorly defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 s s X AFX _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 priming priming ADJ JJ Degree=Pos _ _ _ _ 11 occurs occur NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 poorly poorly ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2360 # text = Using tumour necrosis factor (TNF) induction as a model, experiments were designed to analyse in detail the priming effect on the LPS response in human monocytes. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 analyse analyse VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 detail detail NOUN NN Number=Sing _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 priming priming VERB VBG VerbForm=Ger _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 LPS Lps PROPN NNP Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2361 # text = Priming by IFN-gamma was primarily manifested at the level of TNF mRNA accumulation. 1 Priming Prime VERB VBG VerbForm=Ger _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 primarily primarily ADV RB _ _ _ _ _ 8 manifested manifest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2362 # text = IFN-gamma pre-treatment affected the magnitude rather than the sensitivity of the LPS response. 1 IFN- IFN- SYM NFP _ _ _ _ SpaceAfter=No 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 4 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 7 rather rather ADV RB _ _ _ _ _ 8 than than ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2363 # text = Priming occurred after several hours of treatment, and the primed state was induced by either IFN-gamma or GM-CSF, but not M-CSF. 1 Priming Prime PROPN NNP Number=Sing _ _ _ _ 2 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 after after ADP IN _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 hours hour NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 primed prim ADJ JJ Degree=Pos _ _ _ _ 12 state state NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2364 # text = Primed monocytes transcribed TNF mRNA at a higher rate than freshly isolated monocytes upon activation with LPS. 1 Primed Prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 higher higher ADJ JJR Degree=Cmp _ _ _ _ 9 rate rate NOUN NN Number=Sing _ _ _ _ 10 than than SCONJ IN _ _ _ _ _ 11 freshly freshly ADV RB _ _ _ _ _ 12 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2365 # text = The increased transcriptional rate correlated with a marked increase in nuclear factor-kappa B activity in these cells as determined by electrophoretic mobility shift assay using a consensus NF-kappa B oligonucleotide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 as as SCONJ IN _ _ _ _ _ 21 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ _ 27 using use VERB VBG VerbForm=Ger _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 consensus consensus NOUN NN Number=Sing _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2366 # text = An additional significant finding was than TNF mRNA induced in primed cells was much more stable than in unprimed cells (T1/2 increased 6-8-fold). 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 significant significant ADJ JJ Degree=Pos _ _ _ _ 4 finding finding NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 than than ADP IN _ _ _ _ _ 7 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 primed prim ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 much much ADV RB _ _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 stable stable ADJ JJ Degree=Pos _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 T1 t1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / SYM SYM _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2367 # text = Consistent with the increased mRNA stability, the duration of mRNA accumulation was longer following LPS stimulation in primed monocytes, in addition to being of greater magnitude. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 duration duration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 longer longer ADV RBR Degree=Cmp _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 primed prim ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 addition addition NOUN NN Number=Sing _ _ _ _ 24 to to SCONJ IN _ _ _ _ _ 25 being be AUX VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 greater greater ADJ JJR Degree=Cmp _ _ _ _ 28 magnitude magnitude NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2368 # text = Finally, primed and unprimed cells possessed a differential sensitivity to the kinase inhibitor H-89. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 primed prim ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 possessed possess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 89 89 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2369 # text = H-89 substantially suppressed LPS-induced TNF mRNA accumulation in unprimed cells, but had no effect on primed monocytes following LPS stimulation. 1 H h INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 89 89 NUM CD NumType=Card _ _ _ _ 4 substantially substantially ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 primed prim ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 following follow VERB VBG VerbForm=Ger _ _ _ _ 24 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2370 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2371 # text = Document 003001131 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001131 003001131 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2372 # text = Immunosuppression by glucocorticoids: inhibition of NF-kappa B activity through induction of I kappa B synthesis [see comments] 1 Immunosuppression Immunosuppression NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B B PROPN NNP Number=Sing _ _ _ _ 18 synthesis synthesis PROPN NNPS Number=Plur _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 2373 # text = Glucocorticoids are among the most potent anti-inflammatory and immunosuppressive agents. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 among among ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 most most ADV RBS _ _ _ _ _ 6 potent potent ADJ JJ Degree=Pos _ _ _ _ 7 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2374 # text = They inhibit synthesis of almost all known cytokines and of several cell surface molecules required for immune function, but the mechanism underlying this activity has been unclear. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 known known ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2375 # text = Here it is shown that glucocorticoids are potent inhibitors of nuclear factor kappa B (NF-kappa B) activation in mice and cultured cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 potent potent ADJ JJ Degree=Pos _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mice mouse NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2376 # text = This inhibition is mediated by induction of the I kappa B alpha inhibitory protein, which traps activated NF-kappa B in inactive cytoplasmic complexes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 I I PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 traps traps NOUN NNS Number=Plur _ _ _ _ 18 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 25 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2377 # text = Because NF-kappa B activates many immunoregulatory genes in response to pro-inflammatory stimuli, the inhibition of its activity can be a major component of the anti-inflammatory activity of glucocorticoids. 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 many many ADJ JJ Degree=Pos _ _ _ _ 8 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 pro-inflammatory pro-inflammatory VERB VB VerbForm=Inf _ _ _ _ 14 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 component component NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2378 # text = Document 003001132 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001132 003001132 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2379 # text = Calcium signalling in T cells stimulated by a cyclophilin B-binding protein. 1 Calcium calcium PROPN NNP Number=Sing _ _ _ _ 2 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2380 # text = The immunosuppressant drug cyclosporin A blocks a calcium-dependent signal from the T-cell receptor (TCR) that normally leads to T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ _ 4 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 5 A a NOUN NN Number=Sing _ _ _ _ 6 blocks block NOUN NNS Number=Plur _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2381 # text = When bound to cyclophilin, cyclosporin 1 When when ADV WRB PronType=Int _ _ _ _ 2 bound bound ADJ JJ Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 2382 # text = A binds and inactivates the key signalling intermediate calcineurin. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 binds bind NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 inactivates inactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 key key NOUN NN Number=Sing _ _ _ _ 7 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 8 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2383 # text = To identify potential cellular homologues of cyclosporin 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 potential potential ADJ JJ Degree=Pos _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 homologues homologue NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 2384 # text = A that might regulate calcium signalling, we have cloned human genes encoding cyclophilin B-binding-proteins using the yeast two-hybrid system. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 might might AUX MD VerbForm=Fin _ _ _ _ 4 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 5 calcium calcium NOUN NN Number=Sing _ _ _ _ 6 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 14 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 15 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 25 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2385 # text = One gene product, when overexpressed in Jurkat T cells, specifically induced transcription from the interleukin-2 enhancer, by activating the T-cell-specific transcription factors NF-AT and NF-IL2A. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 activating activat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 AT AT PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 IL2A IL2A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2386 # text = This protein, termed calcium-signal modulating cyclophilin ligand (CAML), acts downstream of the TCR and upstream of calcineurin by causing an influx of calcium. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 calcium- calcium- PUNCT , _ _ _ _ SpaceAfter=No 6 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 8 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 downstream downstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 causing cause VERB VBG VerbForm=Ger _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 influx influx NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2387 # text = CAML appears to be a new participant in the calcium-signal transduction pathway, implicating cyclophilin B in calcium signalling, even in the absence of cyclosporin. 1 CAML caml NOUN NN Number=Sing _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 participant participant NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 calcium- calcium- SYM SYM _ _ _ _ SpaceAfter=No 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 16 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 even even ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 absence absence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2388 # text = Document 003001133 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001133 003001133 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2389 # text = Characterization of defensin resistance phenotypes associated with mutations in the phoP virulence regulon of Salmonella typhimurium. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 defensin defensin ADJ JJ Degree=Pos _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 mutations mutation NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 phoP phoP NOUN NN Number=Sing _ _ _ _ 12 virulence virulence NOUN NN Number=Sing _ _ _ _ 13 regulon regulon NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Salmonella Salmonella PROPN NNP Number=Sing _ _ _ _ 16 typhimurium typhimurium NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2390 # text = The defensin sensitivities of Salmonella typhimurium strains with mutations in the phoP/phoQ two-component virulence regulon were tested by using purified defensins NP-1 and NP-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 defensin defensin NOUN NN Number=Sing _ _ _ _ 3 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Salmonella Salmonella PROPN NNP Number=Sing _ _ _ _ 6 typhimurium typhimurium NOUN NN Number=Sing _ _ _ _ 7 strains strain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phoP/ phop/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 phoQ phoq NOUN NN Number=Sing _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 component component ADJ JJ Degree=Pos _ _ _ _ 17 virulence virulence NOUN NN Number=Sing _ _ _ _ 18 regulon regulon NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 defensins defensin NOUN NNS Number=Plur _ _ _ _ 25 NP NP SYM NFP _ _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 NP Np NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2391 # text = Strains with mutations in either gene of the regulatory pair (phoP [transcriptional activator] or phoQ [membrane sensor kinase]) had increased sensitivities to defensin. 1 Strains Strain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 either either DET DT _ _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 pair pair NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 phoP phop NOUN NN Number=Sing _ _ _ _ 13 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 phoQ phoq NOUN NN Number=Sing _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 membrane membrane NOUN NN Number=Sing _ _ _ _ 21 sensor sensor NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 defensin defensin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2392 # text = The predicted periplasmic domain of the PhoQ protein contained a markedly anionic domain that could interact with cationic proteins and that could be responsible for resistance to defensin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 periplasmic periplasmic ADJ JJ Degree=Pos _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PhoQ Phoq PROPN NNP Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ _ 12 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 interact interact VERB VB VerbForm=Inf _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 cationic cationic ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 resistance resistance NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 defensin defensin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2393 # text = Because insertion mutations in phoP are polar on phoQ, we constructed strains that expressed the PhoQ protein in the absence of PhoP to test whether resistance to defensin requires only the phoQ gene product. 1 Because because SCONJ IN _ _ _ _ _ 2 insertion insertion NOUN NN Number=Sing _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 phoP phop NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 polar polar ADJ JJ Degree=Pos _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 phoQ phoq NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 strains strain NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PhoQ Phoq NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 absence absence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PhoP phop NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 test test VERB VB VerbForm=Inf _ _ _ _ 26 whether whether SCONJ IN _ _ _ _ _ 27 resistance resistance NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 defensin defensin VERB VB VerbForm=Inf _ _ _ _ 30 requires require NOUN NNS Number=Plur _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 phoQ phoq NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2394 # text = We found that resistance to defensin requires the function of both components of this regulatory system, because strains expressing PhoQ without PhoP were still markedly sensitive to defensins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 defensin defensin VERB VB VerbForm=Inf _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 strains strain NOUN NNS Number=Plur _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 PhoQ Phoq PROPN NNP Number=Sing _ _ _ _ 22 without without ADP IN _ _ _ _ _ 23 PhoP phop PROPN NNP Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 still still ADV RB _ _ _ _ _ 26 markedly markedly ADV RB _ _ _ _ _ 27 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 defensins defensin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2395 # text = This implied that a pag (phoP-activated gene) product is responsible for defensin resistance. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 implied imply VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 pag pag NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 phoP- phoP- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 product product NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 defensin defensin ADJ JJ Degree=Pos _ _ _ _ 16 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2396 # text = We also tested for the ability of defensins NP-1, NP-5, and HNP-1 to activate pag expression and found that these peptides have no effect. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 defensins defensin NOUN NNS Number=Plur _ _ _ _ 9 NP NP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 NP NP NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 HNP HNP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 activate activate VERB VB VerbForm=Inf _ _ _ _ 23 pag pag NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 peptides peptide NOUN NNS Number=Plur _ _ _ _ 30 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 no no DET DT _ _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2397 # text = Defensin resistance is not the only virulence characteristic controlled by the PhoP-PhoQ regulon because mutations in pagC, as well as ones in the phoP locus that resulted in constitutive pag activation (phenotype PhoPc), had no effect on defensin resistance, even though they rendered the organism avirulent and deficient in survival within macrophages. 1 Defensin Defensin PROPN NNP Number=Sing _ _ _ _ 2 resistance resistance NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 only only ADJ JJ Degree=Pos _ _ _ _ 7 virulence virulence NOUN NN Number=Sing _ _ _ _ 8 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 PhoP phop NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 PhoQ Phoq NOUN NN Number=Sing _ _ _ _ 15 regulon regulon NOUN NN Number=Sing _ _ _ _ 16 because because SCONJ IN _ _ _ _ _ 17 mutations mutation NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 pagC pagC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 ones one NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 phoP phop NOUN NN Number=Sing _ _ _ _ 28 locus locus NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 pag pag NOUN NN Number=Sing _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 37 PhoPc PhoPc NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 no no DET DT _ _ _ _ _ 42 effect effect NOUN NN Number=Sing _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 defensin defensin NOUN NN Number=Sing _ _ _ _ 45 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 even even ADV RB _ _ _ _ _ 48 though though SCONJ IN _ _ _ _ _ 49 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 50 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 organism organism NOUN NN Number=Sing _ _ _ _ 53 avirulent avirulent ADJ JJ Degree=Pos _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 survival survival NOUN NN Number=Sing _ _ _ _ 58 within within ADP IN _ _ _ _ _ 59 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 2398 # text = The virulence defect conferred by mutations in the phoP-phoQ two-component regulatory system is not completely explained by alterations in resistance to cationic proteins and involves the control of other proteins necessary for S. typhimurium survival within macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 virulence virulence NOUN NN Number=Sing _ _ _ _ 3 defect defect NOUN NN Number=Sing _ _ _ _ 4 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 phoP- phop- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 phoQ phoq NOUN NN Number=Sing _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 component component ADJ JJ Degree=Pos _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 completely completely ADV RB _ _ _ _ _ 19 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 alterations alteration NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 resistance resistance NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 cationic cationic ADJ JJ Degree=Pos _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 S. S. PROPN NNP Number=Sing _ _ _ _ 37 typhimurium typhimurium NOUN NN Number=Sing _ _ _ _ 38 survival survival NOUN NN Number=Sing _ _ _ _ 39 within within ADP IN _ _ _ _ _ 40 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2399 # text = Document 003001134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001134 003001134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2400 # text = Histamine modulates the expression of c-fos through cyclic AMP production via the H2 receptor in the human promonocytic cell line U937. 1 Histamine Histamine PRON PRP _ _ _ _ _ 2 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 11 AMP Amp NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 H2 h2 NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2401 # text = We examined the effects of histamine and its agonists on the expression of the c-fos and c-myc proto-oncogenes at the transcriptional and translational levels in the human promonocytic U937 cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 histamine histamine NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 agonists agonist NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c- c- SYM SYM _ _ _ _ SpaceAfter=No 16 fos fo NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 myc myc ADJ JJ Degree=Pos _ _ _ _ 20 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 translational translational ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 32 U937 U937 NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2402 # text = Histamine transiently increased cAMP and c-fos expression through H2 receptors. 1 Histamine Histamine ADV RB _ _ _ _ _ 2 transiently transiently ADV RB _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 H2 H2 NUM CD NumType=Card _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2403 # text = Dibutyryl cAMP also increased c-fos mRNA and protein, and levels remained elevated even after 12 hr of treatment. 1 Dibutyryl Dibutyryl PROPN NNP Number=Sing _ _ _ _ 2 cAMP camp PROPN NNP Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 even even ADV RB _ _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 12 12 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2404 # text = Dose-dependence studies using histamine and dimaprit showed that the EC50 values for cAMP production and c-fos increase were similar, suggesting that cAMP might be involved in c-fos induction via H2 receptors. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependence dependence NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 histamine histamine NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 dimaprit dimaprit NOUN NN Number=Sing _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EC50 EC50 NOUN NN Number=Sing _ _ _ _ 13 values value NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 increase increase NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 cAMP camp PROPN NNP Number=Sing _ _ _ _ 28 might might AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 fos fos NOUN NN Number=Sing _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 via via ADP IN _ _ _ _ _ 37 H2 H2 NUM CD NumType=Card _ _ _ _ 38 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2405 # text = Furthermore, studies carried out using H7, a protein kinase A/protein kinase C inhibitor, blocked c-fos induction, whereas no effect was observed with bisindolylmaleimide, a specific protein kinase C inhibitor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 out out ADP RP _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 H7 H7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 effect effect NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 bisindolylmaleimide bisindolylmaleimide NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C c NOUN NN Number=Sing _ _ _ _ 38 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2406 # text = No modification of c-myc expression could be detected on treatment with histamine or its analogues. 1 No no DET DT _ _ _ _ _ 2 modification modification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 myc myc ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 histamine histamine NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2407 # text = Nevertheless, dibutyryl cAMP induced a down-regulation of the levels of this proto-oncogene. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 dibutyryl dibutyryl ADJ JJ Degree=Pos _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 down down ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 -regulation -regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -oncogene -oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2408 # text = In addition, dibutyryl cAMP inhibited cell growth in a dose-dependent manner, whereas histamine failed to affect proliferation and differentiation of U937 cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 dibutyryl dibutyryl ADJ JJ Degree=Pos _ _ _ _ 5 cAMP camp NOUN NN Number=Sing _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 histamine histamine PRON PRP _ _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 U937 U937 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2409 # text = Cells pretreated with dimaprit showed a decrease in the cAMP response to subsequent addition of H2 agonists, whereas the cAMP response to prostaglandin E2 remained unaltered. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 dimaprit dimaprit NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 decrease decrease NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cAMP camp NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 H2 H2 NUM CD NumType=Card _ _ _ _ 17 agonists agonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cAMP camp PROPN NNP Number=Sing _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 prostaglandin prostaglandin VERB VB VerbForm=Inf _ _ _ _ 25 E2 E2 NUM CD NumType=Card _ _ _ _ 26 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 unaltered unaltered ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2410 # text = This homologous mechanism of H2 receptor desensitization was time dependent. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 H2 H2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 desensitization desensitization NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2411 # text = These results indicate that histamine activates several mechanisms involved in the induction of differentiation, such as cAMP and c-fos production, but fails to promote differentiation of U937 cells, apparently due to the rapid desensitization of H2 receptors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 histamine histamine PRON PRP _ _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fos NOUN NNS Number=Plur _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 promote promote VERB VB VerbForm=Inf _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 U937 U937 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 apparently apparently ADV RB _ _ _ _ _ 35 due due ADP IN _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 39 desensitization desensitization NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 H2 H2 NUM CD NumType=Card _ _ _ _ 42 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2412 # text = Document 003001135 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001135 003001135 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2413 # text = Transcription mediated by NFAT is highly inducible in effector CD4+ T helper 2 (Th2) cells but not in Th1 cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 effector effector ADJ JJ Degree=Pos _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 helper helper NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Th2 th2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Th1 Th1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2414 # text = Transcriptional factors of the NFAT family play an important role in regulating the expression of several cytokine genes during the immune response, such as the genes for interleukin 2 (IL-2) and IL-4, among others. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 30 2 2 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 X LS _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 among among ADP IN _ _ _ _ _ 42 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2415 # text = Upon antigen stimulation, precursor CD4+ T helper (pTh) cells proliferate and differentiate into two populations of effector cells (eTh1 and eTh2), each one expressing a specific pattern of cytokines that distinguishes them from their precursors. 1 Upon upon ADP IN _ _ _ _ _ 2 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 pTh pTh NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 proliferate proliferate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 populations population NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 effector effector NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 eTh2 eTh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 each each DET DT _ _ _ _ _ 30 one one NOUN NN Number=Sing _ _ _ _ 31 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 pattern pattern NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 distinguishes distinguish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 precursors precursor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2416 # text = eTh2 cells are the major source of IL-4, while gamma interferon is produced by eTh1 cells. 1 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 source source NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 interferon interferon NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2417 # text = Here we have used reporter transgenic mice to show that DNA binding and transcriptional activities of NFAT are transiently induced during the differentiation of pTh cells into either eTh1 or eTh2 cells to mediate the expression of IL-2 as a common growth factor in both pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 show show VERB VB VerbForm=Inf _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activities activity NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 transiently transiently ADV RB _ _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 pTh pTh ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 either either CCONJ CC _ _ _ _ _ 29 eTh1 eTh1 PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 common common ADJ JJ Degree=Pos _ _ _ _ 44 growth growth NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 both both DET DT _ _ _ _ _ 48 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2418 # text = However, although NFAT DNA binding is similarly induced in both eTh1 and eTh2 cells upon antigen stimulation, only the NFAT complexes present in eTh2 cells are able to mediate high-level transcription, and relatively little NFAT transcriptional activity was induced in eTh1 cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 NFAT NFAT SCONJ IN _ _ _ _ _ 5 DNA Dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 similarly similarly ADV RB _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 23 complexes complexe NOUN NNS Number=Plur _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 able able ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 level level NOUN NN Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 relatively relatively ADV RB _ _ _ _ _ 39 little little ADJ JJ Degree=Pos _ _ _ _ 40 NFAT Nfat SCONJ IN _ _ _ _ _ 41 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2419 # text = In contrast to activated pTh cells, neither eTh1 nor eTh2 cells produced significant IL-2 upon stimulation, but the high levels of NFAT transcriptional activities directly correlate with the IL-4 production induced in response to antigen stimulation in eTh2 cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 pTh pTh NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 neither neither CCONJ CC _ _ _ _ _ 9 eTh1 eTh1 PROPN NNP Number=Sing _ _ _ _ 10 nor nor CCONJ CC _ _ _ _ _ 11 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 significant significant ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 upon upon ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activities activity NOUN NNS Number=Plur _ _ _ _ 29 directly directly ADV RB _ _ _ _ _ 30 correlate correlate ADV RB Degree=Pos _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 42 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2420 # text = These data suggest that activated NFAT is involved in the effector function of eTh2 cells and that the failure of eTh1 cells to produce IL-4 in response to an antigen is due, at least partially, to a failure to induce high-level transcription of the IL-4 gene by NFAT. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effector effector NOUN NN Number=Sing _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 failure failure NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 produce produce VERB VB VerbForm=Inf _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 antigen antigen NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 due due ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 at at ADV RB _ _ _ _ _ 37 least least ADV RBS Degree=Sup _ _ _ _ 38 partially partially ADV RB _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 failure failure NOUN NN Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 induce induce VERB VB VerbForm=Inf _ _ _ _ 45 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 level level NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - SYM SYM _ _ _ _ SpaceAfter=No 53 4 4 NUM CD NumType=Card _ _ _ _ 54 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 2421 # text = Regulation of NFAT could be therefore a critical element in the polarization to eTh1 or eTh2. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 therefore therefore ADV RB _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 polarization polarization NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 eTh2 eTh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2422 # text = Document 003001136 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001136 003001136 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2423 # text = Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 6 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2424 # text = The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 key key ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immune immune ADJ JJ Degree=Pos _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2425 # text = T cell receptor (TCR) cross-linking is in part required for activation of NF-kappaB, which is dependent on the phosphorylation and degradation of IkappaBalpha. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -linking -linking NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 part part NOUN NN Number=Sing _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 degradation degradation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2426 # text = By using Jurkat and primary human T lymphocytes, we demonstrate that the simultaneous activation of two second messengers of the TCR-initiated signal transduction, protein kinase C (PKC) and calcineurin, results in the synergistic activation of the IkappaBalpha kinase (IKK) complex but not of another putative IkappaBalpha kinase, p90(rsk). 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t NOUN NN Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 messengers messenger NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 C C PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 results result NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 complex complex ADJ JJ Degree=Pos _ _ _ _ 50 but but CCONJ CC _ _ _ _ _ 51 not not ADV RB _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 another another DET DT _ _ _ _ _ 54 putative putative ADJ JJ Degree=Pos _ _ _ _ 55 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 p90 p90 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 rsk rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 2427 # text = We also demonstrate that the IKK complex, but not p90(rsk), is responsible for the in vivo phosphorylation of IkappaBalpha mediated by the co-activation of PKC and calcineurin. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IKK IKK PROPN NNP Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 p90 p90 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 rsk rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vivo vivo NOUN NN Number=Sing _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 co-activation co-activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PKC Pkc NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2428 # text = Each second messenger is necessary, as inhibition of either one reverses the activation of the IKK complex and IkappaBalpha phosphorylation in vivo. 1 Each each DET DT _ _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 messenger messenger NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 necessary necessary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 reverses reverse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IKK IKK PROPN NNP Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 2429 # text = Overexpression of dominant negative forms of IKKalpha and -beta demonstrates that only IKKbeta is the target for PKC and calcineurin. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 forms form NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 target target NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 PKC PKC NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2430 # text = These results indicate that within the TCR/CD3 signal transduction pathway both PKC and calcineurin are required for the effective activation of the IKK complex and NF-kappaB in T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TCR/ Tcr/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 PKC Pkc NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 effective effective ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IKK IKK PROPN NNP Number=Sing _ _ _ _ 25 complex complex PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2431 # text = Document 003001137 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001137 003001137 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2432 # text = Attenuated function of a variant form of the helix-loop-helix protein, Id-3, generated by an alternative splicing mechanism. 1 Attenuated Attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 variant variant ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 helix helix NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 22 splicing splicing NOUN NN Number=Sing _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2433 # text = The Id family of helix-loop-helix proteins function as negative regulators of DNA binding, basic helix-loop-helix proteins in the regulation of cell growth and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Id id ADJ JJ Degree=Pos _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 helix helix NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulators regulator NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 basic basic ADJ JJ Degree=Pos _ _ _ _ 19 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -loop -loop ADP IN _ _ _ _ SpaceAfter=No 21 -helix -helix ADJ JJ Degree=Pos _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 growth growth NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2434 # text = We report here on the identification of a 17 kDa variant of the 14 kDa Id-3 protein termed Id-3L (long version) which possesses a unique 60 amino acid carboxy-terminus generated by read through of a 'coding intron' and alternative splicing. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 identification identification NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 17 17 NUM CD NumType=Card _ _ _ _ 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 variant variant NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 14 14 NUM CD NumType=Card _ _ _ _ 15 kDa kDa PROPN NNP Number=Sing _ _ _ _ 16 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3L 3L PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 long long ADJ JJ Degree=Pos _ _ _ _ 26 version version NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 possesses possess VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 unique unique ADJ JJ Degree=Pos _ _ _ _ 32 60 60 NUM CD NumType=Card _ _ _ _ 33 amino amino DET DT _ _ _ _ _ 34 acid acid ADJ JJ Degree=Pos _ _ _ _ 35 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 terminus terminus NOUN NN Number=Sing _ _ _ _ 38 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 read read VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 45 coding coding NOUN NN Number=Sing _ _ _ _ 46 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ' ' PUNCT '' _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 50 splicing splicing NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2435 # text = Northern analysis revealed expression of a minor 1.1 kb 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 minor minor ADJ JJ Degree=Pos _ _ _ _ 8 1.1 1.1 NUM CD NumType=Card _ _ _ _ 9 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 2436 # text = Id-3L transcript together with the predominant 0.95 kb 1 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3L 3L AUX MD VerbForm=Fin _ _ _ _ 4 transcript transcriep VERB VB VerbForm=Inf _ _ _ _ 5 together together ADV RB _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 9 0.95 0.95 NUM CD NumType=Card _ _ _ _ 10 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 2437 # text = Id-3 transcript in the majority of adult human tissues analysed. 1 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 transcript transcript NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 majority majority NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 adult adult ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2438 # text = The variant Id-3L protein is functionally distinguishable from conventional Id-3 since in in vitro DNA mobility shift assays, it was greatly impaired in its ability to abrogate binding of the basic helix-loop-helix protein, E47, to an E box recognition sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 variant variant ADJ JJ Degree=Pos _ _ _ _ 3 Id id NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 3L 3L NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 functionally functionally ADV RB _ _ _ _ _ 9 distinguishable distinguishable ADJ JJ Degree=Pos _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 12 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 since since ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NUM CD NumType=Card _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 greatly greatly ADV RB _ _ _ _ _ 27 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 abrogate abrogate VERB VB VerbForm=Inf _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 basic basic ADJ JJ Degree=Pos _ _ _ _ 37 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -helix -helix NOUN NN Number=Sing _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 E47 E47 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 E e NOUN NN Number=Sing _ _ _ _ 46 box box NOUN NN Number=Sing _ _ _ _ 47 recognition recognition NOUN NN Number=Sing _ _ _ _ 48 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2439 # text = Document 003001138 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001138 003001138 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2440 # text = Targeted disruption of the MyD88 gene results in loss of IL-1- and IL-18-mediated function. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2441 # text = MyD88, originally isolated as a myeloid differentiation primary response gene, is shown to act as an adaptor in interleukin-1 (IL-1) signaling by interacting with both the IL-1 receptor complex and IL-1 receptor-associated kinase (IRAK). 1 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 originally originally ADV RB _ _ _ _ _ 4 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 act act VERB VB VerbForm=Inf _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 both both CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 complex complex NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 receptor-associated receptor-associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2442 # text = Mice generated by gene targeting to lack MyD88 have defects in T cell proliferation as well as induction of acute phase proteins and cytokines in response to IL-1. 1 Mice mouse NOUN NN Number=Sing _ _ _ _ 2 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 targeting target VERB VBG VerbForm=Ger _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 lack lack VERB VB VerbForm=Inf _ _ _ _ 8 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 defects defect NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 acute acute ADJ JJ Degree=Pos _ _ _ _ 21 phase phase NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2443 # text = Increases in interferon-gamma production and natural killer cell activity in response to IL-18 are abrogated. 1 Increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 natural natural ADJ JJ Degree=Pos _ _ _ _ 9 killer killer NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 18 18 NUM CD NumType=Card _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2444 # text = In vivo Th1 response is also impaired. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADV RB _ _ _ _ _ 3 Th1 th1 NUM CD NumType=Card _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2445 # text = Furthermore, IL-18-induced activation of NF-kappaB and c-Jun N-terminal kinase (JNK) is blocked in MyD88-/- Th1-developing cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Jun Jun PROPN NNP Number=Sing _ _ _ _ 17 N- N- SYM NFP _ _ _ _ SpaceAfter=No 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 MyD88 MyD88 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -/- -/- PUNCT . _ _ _ _ _ 28 Th1 Th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 -developing -develop ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2446 # text = Taken together, these results demonstrate that MyD88 is a critical component in the signaling cascade that is mediated by IL-1 receptor as well as IL-18 receptor. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 component component NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 cascade cascade NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 18 18 NUM CD NumType=Card _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2447 # text = Document 003001139 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001139 003001139 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2448 # text = Transcriptional regulation of the beta-casein gene by cytokines: cross-talk between STAT5 and other signaling molecules. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 casein casein NOUN NN Number=Sing _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 cross-talk cross-talk NOUN NNS Number=Plur _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2449 # text = The beta-casein promoter has been widely used to monitor the activation of STAT (signal transducer and activator of transcription)5 since STAT5 was originally found as a mediator of PRL-inducible beta-casein expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 casein casein NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 widely widely ADV RB _ _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 STAT STAT NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transducer transducer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 since since ADP IN _ _ _ _ _ 26 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 originally originally ADV RB _ _ _ _ _ 29 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 mediator mediator NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 37 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 casein casein NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2450 # text = However, not only is expression of the beta-casein gene regulated by STAT5 but it is also affected by other molecules such as glucocorticoid and Ras. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 not not ADV RB _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 casein casein NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ras Ras NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2451 # text = In this report, we describe the transcriptional regulation of the beta-casein gene by cytokines in T cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 casein casein NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2452 # text = We have found that the beta-casein gene is expressed in a cytotoxic T cell line, CTLL-2, in response to interleukin-2 (IL-2), which activates STAT5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 casein casein NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 CTLL CTLL NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 interleukin interleukin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 STAT5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2453 # text = While IL-4 does not activate STAT5, it induces expression of STAT5-regulated genes in CTLL-2, i.e. beta-casein, a cytokine-inducible SH2-containing protein (CIS), and oncostatin M (OSM), suggesting that STAT6 activated by IL-4 substitutes for the function of STAT5 in T cells. 1 While while SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 11 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 i.e. i.e. X FW _ _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 casein casein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 SH2 Sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 containing containing VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 CIS CIS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 oncostatin oncostatin ADJ JJ Degree=Pos _ _ _ _ 42 M m NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 OSM OSM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 48 that that SCONJ IN _ _ _ _ _ 49 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 50 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 4 4 NUM CD NumType=Card _ _ _ _ 55 substitutes substitute NOUN NNS Number=Plur _ _ _ _ 56 for for ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 function function NOUN NN Number=Sing _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 61 in in ADP IN _ _ _ _ _ 62 T T PROPN NNP Number=Sing _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2454 # text = IL-2-induced beta-casein expression was enhanced by dexamethasone, and this synergistic effect of Dexamethasone requires the sequence between -155 and -193 in the beta-casein promoter. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 casein casein NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 21 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 155 155 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 193 193 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 casein casein NOUN NN Number=Sing _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2455 # text = Coincidentally, a deletion of this region enhanced the IL-2-induced expression of beta-casein. 1 Coincidentally Coincidentally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 casein casein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2456 # text = Expression of an active form of Ras, Ras(G12V), suppressed the IL-2-induced beta-casein and OSM gene expression, and the negative effect of Ras is mediated by the region between -105 and -193 in the beta-casein promoter. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 form form NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 G12 G12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 V V NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 casein casein NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 OSM OSm NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 effect effect NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Ras Ras PROPN NNP Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ _ 41 between between ADP IN _ _ _ _ _ 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 105 105 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 - - SYM SYM _ _ _ _ SpaceAfter=No 46 193 193 NUM CD NumType=Card _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 casein casein NOUN NN Number=Sing _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2457 # text = In apparent contradiction, expression of a dominant negative form of Ras, RasN17, also inhibited IL-2-induced activation of the promoter containing the minimal beta-casein STAT5 element as well as the promoters of CIS and OSM. 1 In in ADP IN _ _ _ _ _ 2 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 3 contradiction contradiction NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 form form NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 RasN RasN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 containing contain VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 casein casein NOUN NN Number=Sing _ _ _ _ 34 STAT5 stat5 NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ _ 36 as as ADV RB _ _ _ _ _ 37 well well ADV RB Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 CIS CIS PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 OSM OSM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2458 # text = In addition, Ras(G12V) complemented signaling by an erythropoietin receptor mutant defective in Ras activation and augmented the activation of the beta-casein promoter by the mutant erythropoietin receptor signaling, suggesting a possible role of Ras in Stat5-mediated gene expression. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 G12 G12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 V V NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 complemented complement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 mutant mutant NOUN NN Number=Sing _ _ _ _ 16 defective defective ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Ras Ras PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 casein casein NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 33 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 possible possible ADJ JJ Degree=Pos _ _ _ _ 40 role role NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 Ras Ras PROPN NNP Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2459 # text = These results collectively reveal a complex interaction of STAT5 with other signaling pathways and illustrate that regulation of gene expression requires integration of opposing signals. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 collectively collectively ADV RB _ _ _ _ _ 4 reveal reveal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 complex complex ADJ JJ Degree=Pos _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 illustrate illustrate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 integration integration NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 opposing oppos ADJ JJ Degree=Pos _ _ _ _ 25 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2460 # text = Document 003001140 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001140 003001140 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2461 # text = Induction of transcription factors in human T lymphocytes by aspirin-like drugs. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 aspirin aspirin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2462 # text = Aspirin-like drugs (ALD) induce calcium mobilization, an essential component of T cell activation, but do not induce the biosynthesis of IL-2. 1 Aspirin aspirin ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 drugs drug NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ALD ALD NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 induce induce NOUN NN Number=Sing _ _ _ _ 9 calcium calcium NOUN NN Number=Sing _ _ _ _ 10 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 essential essential ADJ JJ Degree=Pos _ _ _ _ 14 component component NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 biosynthesis biosynthesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2463 # text = To understand the extent to which ALD may mimic mitogenic stimulation, we studied cytoplasmic and nuclear signaling steps in ALD-treated T cells. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extent extent NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 ALD ALD PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 10 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 19 steps step NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2464 # text = We found that ALD induce a transient activation of protein kinase (PKC) but have no effect (in comparison to anti-CD3 antibodies) on protein tyrosine phosphorylation nor on PCL gamma 1 tyrosine phosphorylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ALD ALD PROPN NNP Number=Sing _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transient transient ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 in in ADP IN _ _ _ _ _ 21 comparison comparison NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 nor nor CCONJ CC _ _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 PCL pCl NOUN NN Number=Sing _ _ _ _ 33 gamma gamma NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2465 # text = ALD-induced calcium mobilization and PKC activation are independent of tyrosine protein kinase activity as shown by the lack of effect of herbimycin, a tyrosine-protein kinase-specific inhibitor. 1 ALD ALd VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 calcium calcium NOUN NN Number=Sing _ _ _ _ 5 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 PKC Pkc NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lack lack NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 herbimycin herbimycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2466 # text = Although we detected no IL-2 mRNA in ALD-treated cells, the nuclei of these cells contain proteins capable of binding to three regulatory sequences in the IL-2 promoter region: 1 Although although SCONJ IN _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 capable capable ADJ JJ Degree=Pos _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 three three NUM CD NumType=Card _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 : : PUNCT : _ _ _ _ _ # sent_id = 2467 # text = NFAT, NF kappa B, and AP-1. 1 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2468 # text = These binding activities are expressed only in activated T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 binding binding ADJ JJ Degree=Pos _ _ _ _ 3 activities activity NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2469 # text = The expression of AP-1 depended on calcium mobilization and PKC activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 depended depend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 calcium calcium NOUN NN Number=Sing _ _ _ _ 10 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 PKC Pkc NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2470 # text = These data suggest that ALD cause transient but significant changes in T cell transmembrane signaling, although some events induced by stimulation with anti-CD3 antibodies are not induced by ALD. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 ALD Ald AUX MD VerbForm=Fin _ _ _ _ 6 cause cause VERB VB VerbForm=Inf _ _ _ _ 7 transient transient ADJ JJ Degree=Pos _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 15 signaling signaling VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 events event NOUN NNS Number=Plur _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2471 # text = The signal is transmitted to the nucleus and induces DNA-binding activity by several transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 transmitted transmit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 induces induce NOUN NNS Number=Plur _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2472 # text = However, the ALD stimulus is not capable of causing complete T cell activation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ALD Ald ADJ JJ Degree=Pos _ _ _ _ 5 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 causing cause VERB VBG VerbForm=Ger _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2473 # text = Document 003001141 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001141 003001141 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2474 # text = Induction of activator protein (AP)-1 and nuclear factor-kappaB by CD28 stimulation involves both phosphatidylinositol 3-kinase and acidic sphingomyelinase signals. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activator activator NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 CD28 CD28 NUM CD NumType=Card _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 26 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2475 # text = A major obstacle in understanding the signaling events that follow CD28 receptor ligation arises from the fact that CD28 acts as a costimulus to TCR engagement, making it difficult to assess the relative contribution of CD28 signals as distinct from those of the TCR. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 obstacle obstacle NOUN NN Number=Sing _ _ _ _ 4 in in SCONJ IN _ _ _ _ _ 5 understanding understande VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signal NOUN NN Number=Sing _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 CD28 CD28 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ligation ligation NOUN NN Number=Sing _ _ _ _ 14 arises arise NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 fact fact NOUN NN Number=Sing _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 20 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 costimulus costimulus NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 TCR Tcr VERB VB VerbForm=Inf _ _ _ _ 26 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 making make VERB VBG VerbForm=Ger _ _ _ _ 29 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 difficult difficult ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 assess assess VERB VB VerbForm=Inf _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 relative relative ADJ JJ Degree=Pos _ _ _ _ 35 contribution contribution NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD28 CD28 NUM CD NumType=Card _ _ _ _ 38 signals signal NOUN NNS Number=Plur _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2476 # text = To overcome this problem, we have exploited the observation that activated human T cell blasts can be stimulated via the CD28 surface molecule in the absence of antigenic challenge; thus, we have been able to observe the response of normal T cells to CD28 activation in isolation. 1 To to PART TO _ _ _ _ _ 2 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 problem problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 exploited exploite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 observation observation NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 blasts blast NOUN NNS Number=Plur _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 absence absence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 30 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 thus thus ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 35 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 able able ADJ JJ Degree=Pos _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 observe observe VERB VB VerbForm=Inf _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 response response NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 normal normal ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 CD28 CD28 NUM CD NumType=Card _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 isolation isolation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2477 # text = Using this system, we observed that CD28 stimulation by B7-transfected CHO cells induced a proliferative response in T cells that was not accompanied by measurable IL-2 production. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 B7 B7 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 CHO cho PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 measurable measurable ADJ JJ Degree=Pos _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2478 # text = However, subsequent analysis of transcription factor generation revealed that B7 stimulation induced both activator protein-1 (AP-1) and nuclear factor-kappaB (NF-kappaB) complexes, but not NF-AT. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 generation generation NOUN NN Number=Sing _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 B7 B7 NUM CD NumType=Card _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 X LS _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2479 # text = In contrast, engagement of the TCR by class II MHC/superantigen, either with or without CD28 ligation, resulted in the induction of NF-AT, AP-1, and NF-kappaB as well as IL-2 production. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii PROPN NNP Number=Sing _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 superantigen superantigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 without without ADP IN _ _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 well well ADV RB Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2480 # text = Using selective inhibitors, we investigated the signaling pathways involved in the CD28-mediated induction of AP-1 and NF-kappaB. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2481 # text = This revealed that NF-kappaB generation was sensitive to chloroquine, an inhibitor of acidic sphingomyelinase, but not to the phosphatidylinositol 3-kinase inhibitor, wortmannin. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 generation generation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 chloroquine chloroquine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 17 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 wortmannin wortmannin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2482 # text = In contrast, AP-1 generation was inhibited by wortmannin and was also variably sensitive to chloroquine. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 generation generation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 wortmannin wortmannin NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 variably variably ADV RB _ _ _ _ _ 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 chloroquine chloroquine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2483 # text = These data suggest that in activated normal T cells, CD28-derived signals can stimulate proliferation at least in part via NF-kappaB and AP-1 generation, and that this response uses both acidic sphingomyelinase and phosphatidylinositol 3-kinase-linked pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 part part NOUN NN Number=Sing _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 both both DET DT _ _ _ _ _ 38 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 39 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 42 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2484 # text = Document 003001142 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001142 003001142 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2485 # text = Different sequence requirements for expression in erythroid and megakaryocytic cells within a regulatory element upstream of the GATA-1 gene. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 requirements requirement NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2486 # text = The lineage-restricted transcription factor GATA-1 is required for differentiation of erythroid and megakaryocytic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2487 # text = We have localized a 317 base pair cis-acting regulatory element, HS I, associated with a hematopoietic-specific 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 317 317 NUM CD NumType=Card _ _ _ _ 6 base base NOUN NN Number=Sing _ _ _ _ 7 pair pair NOUN NN Number=Sing _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 acting act VERB VBG VerbForm=Ger _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 HS HS VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2488 # text = DNase I hypersensitive site, which lies approx. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 approx approx NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 2489 # text = 3.7 kilobases upstream of the murine hematopoietic-specific GATA-1 IE promoter. 1 3.7 3.7 NUM CD NumType=Card _ _ _ _ 2 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 3 upstream upstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 IE ie NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2490 # text = HS I directs high-level expression of reporter GATA-1/lacZ genes to primitive and definitive erythroid cells and megakaryocytes in transgenic mice. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 level level NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lacZ lacz NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2491 # text = Comparative sequence analysis of HS I between human and mouse shows approx. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HS HS PROPN NNP Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 human human NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 mouse mouse NOUN NN Number=Sing _ _ _ _ 11 shows show NOUN NNS Number=Plur _ _ _ _ 12 approx approx NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2492 # text = 63% nucleotide identity with a more conserved core of 169 base pairs (86% identity). 1 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 % % SYM NN Number=Sing _ _ _ _ 3 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 4 identity identity NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 9 core core NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 169 169 NUM CD NumType=Card _ _ _ _ 12 base base NOUN NN Number=Sing _ _ _ _ 13 pairs pair NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 identity identity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2493 # text = This core contains a GATA site separated by 10 base pairs from an E-box motif. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 GATA GATa PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ _ 10 base base NOUN NN Number=Sing _ _ _ _ 11 pairs pair NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 box box NOUN NN Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2494 # text = The composite motif binds a multi-protein hematopoietic-specific transcription factor complex which includes GATA-1, SCL/tal-1, E2A, Lmo2 and Ldb-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 composite composite ADJ JJ Degree=Pos _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 multi-protein multi-protein ADJ JJ Degree=Pos _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 SCL Scl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 E2A E2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Lmo2 Lmo2 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Ldb Ldb NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2495 # text = Point mutations of the GATA site abolishes HS I function, whereas mutation of the E-box motif still allows reporter gene expression in both lineages. 1 Point point ADJ JJ Degree=Pos _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 HS H VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 mutation mutation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 still still ADV RB _ _ _ _ _ 20 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2496 # text = Strict dependence of HS I activity on a GATA site implies that assembly of a protein complex containing a GATA-factor, presumably GATA-1 or GATA-2, is critical to activating or maintaining its function. 1 Strict strict ADJ JJ Degree=Pos _ _ _ _ 2 dependence dependence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HS HS PROPN NNP Number=Sing _ _ _ _ 5 I i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 assembly assembly NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 presumably presumably ADV RB _ _ _ _ _ 25 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 critical critical ADJ JJ Degree=Pos _ _ _ _ 35 to to SCONJ IN _ _ _ _ _ 36 activating activat VERB VBG VerbForm=Ger _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2497 # text = Further dissection of the 317 base pair region demonstrates that, whereas all 317 base pairs are required for expression in megakaryocytes, only the 5' 62 base pairs are needed for erythroid-specific reporter expression. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 dissection dissection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 317 317 NUM CD NumType=Card _ _ _ _ 6 base base NOUN NN Number=Sing _ _ _ _ 7 pair pair NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas ADV RB _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 317 317 NUM CD NumType=Card _ _ _ _ 15 base base NOUN NN Number=Sing _ _ _ _ 16 pairs pair NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' PUNCT `` _ _ _ _ _ 28 62 62 NUM CD NumType=Card _ _ _ _ 29 base base NOUN NN Number=Sing _ _ _ _ 30 pairs pair NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 reporter reporter NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2498 # text = These findings demonstrate differential lineage requirements for expression within the HS I element. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 differential differential ADJ JJ Degree=Pos _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ _ 6 requirements requirement NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HS H PROPN NNPS Number=Plur _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 element element VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2499 # text = Document 003001143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001143 003001143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2500 # text = Anti-rheumatic compound aurothioglucose inhibits tumor necrosis factor-alpha-induced HIV-1 replication in latently infected OM10.1 and Ach2 cells. 1 Anti-rheumatic Anti-rheumatic ADJ JJ Degree=Pos _ _ _ _ 2 compound compound NOUN NN Number=Sing _ _ _ _ 3 aurothioglucose aurothioglucose DET DT Number=Plur|PronType=Dem _ _ _ _ 4 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 factor-alpha-induced factor-alpha-induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 latently latently ADV RB _ _ _ _ _ 14 infected infect ADJ JJ Degree=Pos _ _ _ _ 15 OM Om ADP IN _ _ _ _ SpaceAfter=No 16 10.1 10.1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2501 # text = NF-kappaB is a potent cellular activator of HIV-1 gene expression. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 cellular celular ADJ JJ Degree=Pos _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2502 # text = Down-regulation of NF-kappaB activation is known to inhibit HIV replication from the latently infected cells. 1 Down down ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 latently latently ADV RB Degree=Pos _ _ _ _ 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2503 # text = Gold compounds have been effectively used for many decades in the treatment of rheumatoid arthritis. 1 Gold gold NOUN NN Number=Sing _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 effectively effectively ADV RB _ _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 many many ADJ JJ Degree=Pos _ _ _ _ 9 decades decade NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 15 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2504 # text = We previously reported that gold compounds, especially aurothioglucose (AuTG) containing monovalent gold ion, inhibited the DNA-binding of NF-kappaB in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 gold gold ADJ JJ Degree=Pos _ _ _ _ 6 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 especially especially ADV RB _ _ _ _ _ 9 aurothioglucose aurothioglucose NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 AuTG AuTG NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 monovalent monovalent ADJ JJ Degree=Pos _ _ _ _ 15 gold gold NOUN NN Number=Sing _ _ _ _ 16 ion ion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2505 # text = In this report we have examined the efficacy of the gold compound AuTG as an inhibitor of HIV replication in latently infected OM10.1 and Ach2 cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 gold gold ADJ JJ Degree=Pos _ _ _ _ 12 compound compound NOUN NN Number=Sing _ _ _ _ 13 AuTG Autg NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 latently latently ADV RB _ _ _ _ _ 22 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 OM10.1 Om10.1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Ach2 ach2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2506 # text = Tumor necrosis factor (TNF)-alpha-induced HIV-1 replication in OM10.1 or Ach2 cells was significantly inhibited by non-cytotoxic doses of AuTG (>10 microM in OM10.1 cells and >25 F.M in Ach2 cells), while 25 microM of the counter-anion thioglucose (TG) or gold compound containing divalent gold ion, HAuCl3, had no effect. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 OM10.1 OM10.1 NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 non-cytotoxic non-cytotoxic ADJ JJ Degree=Pos _ _ _ _ 25 doses dos NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AuTG AuTG PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 >10 >10 NUM CD NumType=Card _ _ _ _ 30 microM microm NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 OM Om NUM CD NumType=Card _ _ _ SpaceAfter=No 33 10.1 10.1 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 > > PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 25 25 NUM CD NumType=Card _ _ _ _ 38 F. F. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 M m NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 while while SCONJ IN _ _ _ _ _ 46 25 25 NUM CD NumType=Card _ _ _ _ 47 microM microm NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 counter-anion counter-anion NOUN NN Number=Sing _ _ _ _ 51 thioglucose thioglucose NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 TG TG NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 or or CCONJ CC _ _ _ _ _ 56 gold gold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 compound compound NOUN NN Number=Sing _ _ _ _ 58 containing contain VERB VBG VerbForm=Ger _ _ _ _ 59 divalent divalent ADJ JJ Degree=Pos _ _ _ _ 60 gold gold NOUN NN Number=Sing _ _ _ _ 61 ion ion NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 HAuCl3 HAuCl3 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 66 no no DET DT _ _ _ _ _ 67 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 2507 # text = The effect of AuTG on NF-kappaB-dependent gene expression was confirmed by a transient CAT assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AuTG AuTG PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 CAT cat NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2508 # text = Specific staining as well as electron microscopic examinations revealed the accumulation of metal gold in the cells, supporting our previous hypothesis that gold ions could block NF-kappaB-DNA binding by a redox mechanism. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 staining stai VERB VBG VerbForm=Ger _ _ _ _ 3 as as ADV RB _ _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 electron electron ADJ JJ Degree=Pos _ _ _ _ 7 microscopic microscopic ADJ JJ Degree=Pos _ _ _ _ 8 examinations examination NOUN NNS Number=Plur _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 metal metal NOUN NN Number=Sing _ _ _ _ 14 gold gold NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 supporting support VERB VBG VerbForm=Ger _ _ _ _ 20 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 21 previous previous ADJ JJ Degree=Pos _ _ _ _ 22 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 gold gold ADJ JJ Degree=Pos _ _ _ _ 25 ions ion NOUN NNS Number=Plur _ _ _ _ 26 could could AUX MD VerbForm=Fin _ _ _ _ 27 block block VERB VB VerbForm=Inf _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 redox redox NOUN NN Number=Sing _ _ _ _ 36 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2509 # text = These observations indicate that the monovalent gold compound AuTG is a potentially useful drug for the treatment of patients infected with HIV. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monovalent monovalent ADJ JJ Degree=Pos _ _ _ _ 7 gold gold ADJ JJ Degree=Pos _ _ _ _ 8 compound compound NOUN NN Number=Sing _ _ _ _ 9 AuTG Autg NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potentially potentially ADV RB _ _ _ _ _ 13 useful useful ADJ JJ Degree=Pos _ _ _ _ 14 drug drug NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2510 # text = Document 003001144 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001144 003001144 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2511 # text = T-lymphocytes from individuals with filarial inflammatory disease have increased transendothelial migration in vitro. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 individuals individual NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 disease disease NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 12 migration migration NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2512 # text = The in vitro transendothelial migration of circulating filarial antigen-specific T-cells was examined in Wuchereria banerofti infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 4 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 5 migration migration NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 8 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Wuchereria Wuchereria PROPN NNP Number=Sing _ _ _ _ 17 banerofti banerofti NOUN NN Number=Sing _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2513 # text = Circulating T-cells from individuals with filaria-induced lymphatic pathology (LP) had significantly greater migration through unstimulated HUVEC monolayers than did T-cells from asymptomatic infected (MF) individuals (P = 0.04). 1 Circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 individuals individual NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 filaria filaria NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 lymphatic lymphatic ADJ JJ Degree=Pos _ _ _ _ 11 pathology pathology NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LP LP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 greater greater ADJ JJR Degree=Cmp _ _ _ _ 18 migration migration NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 21 HUVEC Huvec NOUN NN Number=Sing _ _ _ _ 22 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 did do NOUN NN Number=Sing _ _ _ _ 25 T- T- PUNCT : _ _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 29 infected infect ADJ JJ Degree=Pos _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 MF MF NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 individuals individual NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P p NOUN NN Number=Sing _ _ _ _ 36 = = SYM SYM _ _ _ _ _ 37 0.04 0.04 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2514 # text = In contrast to the MF individuals where no effect was seen, transendothelial migration of 48-hr filarial antigen stimulated T-cells from LP individuals was significantly (P = 0.01) greater than migration of 48-hr media-stimulated T-cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MF MF PROPN NNP Number=Sing _ _ _ _ 6 individuals individual NOUN NNS Number=Plur _ _ _ _ 7 where where ADV WRB PronType=Rel _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 14 migration migration NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 20 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 LP Lp NOUN NN Number=Sing _ _ _ _ 26 individuals individual NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 significantly significantly ADV RB _ _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 P p SYM NFP _ _ _ _ _ 31 = = SYM SYM _ _ _ _ _ 32 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 greater greater ADJ JJR Degree=Cmp _ _ _ _ 35 than than ADP IN _ _ _ _ _ 36 migration migration NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 hr hr NOUN NN Number=Sing _ _ _ _ 41 media media NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2515 # text = In six of seven patients examined, inhibition of the VLA-4/VCAM-1 pathway resulted in greater than 50% inhibition of transendothelial migration of T-cells. 1 In in ADP IN _ _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 seven seven NUM CD NumType=Card _ _ _ _ 5 patients patient NOUN NN Number=Sing _ _ _ _ 6 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 VLA-4/ Vla-4/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 greater greater ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 25 migration migration NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2516 # text = Document 003001145 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001145 003001145 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2517 # text = Tissue factor expression of human monocytes is suppressed by lysophosphatidylcholine. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 lysophosphatidylcholine lysophosphatidylcholine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2518 # text = The expression of tissue factor (TF), the principal initiator of coagulation, is increased during inflammation and atherosclerosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 principal principal ADJ JJ Degree=Pos _ _ _ _ 12 initiator initiator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 coagulation coagulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2519 # text = Both conditions are promoted by lysophosphatidylcholine (lysoPC). 1 Both both DET DT _ _ _ _ _ 2 conditions condition NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 lysophosphatidylcholine lysophosphatidylcholine NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lysoPC lysoPC NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2520 # text = We observed in the present study that lysoPC (1 to 10 micromol/L) dose-dependently reduced TF activity in human monocytes, as elicited by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ _ 13 micromol/ micromol/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 L l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 dependently dependently ADV RB _ _ _ _ _ 19 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 TF Tf NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2521 # text = Lysophosphatidylethanolamine (lysoPE) and other lysophospholipids did not affect LPS-induced TF activity of human monocytes. 1 Lysophosphatidylethanolamine Lysophosphatidylethanolamine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 lysoPE lysoPE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 lysophospholipids lysophospholipid NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TF Tf NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2522 # text = TF antigen expression as elicited by LPS was also lowered by lysoPC. 1 TF Tf ADP IN _ _ _ _ _ 2 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 lowered lower VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2523 # text = Phospholipid analyses indicated a selective increase in the lysoPC content of the monocytes after preincubation with the lysophospholipid. 1 Phospholipid Phospholipid ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 selective selective ADJ JJ Degree=Pos _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lysoPC lysoPC NOUN NN Number=Sing _ _ _ _ 10 content content NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lysophospholipid lysophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2524 # text = LysoPC inhibited the TF activity of Mono Mac-6 cells to a similar extent as in the monocytes. 1 LysoPC LysoPC PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TF TF PROPN NNP Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Mono Mono PROPN NNP Number=Sing _ _ _ _ 8 Mac Mac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 extent extent NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2525 # text = LPS binding to plasma membrane receptors and internalization of LPS into monocytes were not affected by lysoPC. 1 LPS Lp NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 plasma plasma NOUN NN Number=Sing _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 internalization internalization NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LPS Lp NOUN NNS Number=Plur _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 lysoPC lysoPC NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2526 # text = In contrast, LPS-mediated nuclear binding of nuclear factor-kappaB/Rel to a TF-specific kappaB site was inhibited by lysoPC. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Rel Rel PROPN NNP Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2527 # text = Induction of TF mRNA expression by LPS tended to be partially reduced by the lysophospholipid. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TF TF PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LPS Lp NOUN NNS Number=Plur _ _ _ _ 8 tended tend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 partially partially ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 lysophospholipid lysophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2528 # text = Preincubation with lysoPC increased monocytic cAMP levels. 1 Preincubation Preincubation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cAMP camp NOUN NN Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2529 # text = Inhibition of adenylyl cyclase by pretreatment with 2'-deoxy-3'-adenosine monophosphate partially reversed the inhibition of TF activity promoted by lysoPC. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 adenylyl adenylyl ADJ JJ Degree=Pos _ _ _ _ 4 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 deoxy deoxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 '- '- PUNCT . _ _ _ _ SpaceAfter=No 15 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 16 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 reversed reverse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TF TF PROPN NNP Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2530 # text = In conclusion, lysoPC markedly decreases LPS-mediated TF expression of human monocytes, the effect probably being mediated by both transcriptional and posttranscriptional mechanisms. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 5 markedly markedly ADV RB _ _ _ _ _ 6 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TF Tf NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 probably probably ADV RB _ _ _ _ _ 19 being be AUX VBG VerbForm=Ger _ _ _ _ 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2531 # text = LysoPC may thus attenuate activation of coagulation during inflammation and atherosclerosis. 1 LysoPC Lysopc NOUN NN Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 attenuate attenuate VERB VB VerbForm=Inf _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2532 # text = Document 003001146 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001146 003001146 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2533 # text = IL-2-independent activation and proliferation in human T cells induced by CD28. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2534 # text = Although the role of CD28 in T cell costimulation is firmly established, the mechanisms by which it exerts its costimulatory actions are less clear. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 firmly firmly ADV RB _ _ _ _ _ 12 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 22 actions action NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 less less ADV RBR Degree=Cmp _ _ _ _ 25 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2535 # text = In many circumstances it is difficult to distinguish the effects of CD28 from subsequent actions of cytokines, such as IL-2, on T cell proliferation. 1 In in ADP IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 circumstances circumstance NOUN NNS Number=Plur _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 difficult difficult ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 distinguish distinguish VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 15 actions action NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2536 # text = Here, we report a model of CD28 costimulation using PMA plus the natural ligand CD80 that resulted in very limited stimulation of IL-2, as evidenced by both cytokine production and IL-2 promoter stimulation. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 model model NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD28 CD28 NUM CD NumType=Card _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 using use VERB VBG VerbForm=Ger _ _ _ _ 11 PMA PMA PROPN NNP Number=Sing _ _ _ _ 12 plus plus CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 natural natural ADJ JJ Degree=Pos _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 CD80 CD80 NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 very very ADV RB _ _ _ _ _ 21 limited limited ADJ JJ Degree=Pos _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2537 # text = Promoter assays revealed CD28-dependent effects on both NF-kappaB and AP-1, but not on NF-AT or the intact IL-2 promoter. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 assays assays NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 AT at PROPN NNP Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intact intact NOUN NN Number=Sing _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2538 # text = In addition, T cell proliferation was completely resistant to the actions of the immunosuppressant cyclosporin A (CsA). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T t NUM CD NumType=Card _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 actions action NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 16 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 17 A A NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2539 # text = Moreover T cell proliferation was unaffected by the addition of blocking Abs to both IL-2 and the IL-2 receptor, demonstrating that this form of costimulation by CD28 was independent of IL-2. 1 Moreover moreover PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 addition addition NOUN NN Number=Sing _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 blocking block VERB VBG VerbForm=Ger _ _ _ _ 12 Abs Ab NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 form form NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 independent independent ADJ JJ Degree=Pos _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2540 # text = We also investigated the effects of stimulating T cell blasts with CD80 alone and found that there was a limited requirement for IL-2 in this system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 blasts blast NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ 13 alone alone ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 there there PRON EX _ _ _ _ _ 18 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 limited limited ADJ JJ Degree=Pos _ _ _ _ 21 requirement requirement NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2541 # text = We conclude that CD28 costimulation can cause substantial T cell proliferation in the absence of IL-2, which is driven by a soluble factor independent of NF-AT transactivation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 5 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 cause cause VERB VB VerbForm=Inf _ _ _ _ 8 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 driven drive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 independent independent ADJ JJ Degree=Pos _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 AT at ADP IN _ _ _ _ _ 32 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2542 # text = Document 003001147 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001147 003001147 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2543 # text = Human neutrophils express GH-N gene transcripts and the pituitary transcription factor Pit-1b. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 GH Gh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 N n CCONJ CC Abbr=Yes _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pituitary pituitary ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2544 # text = Since GH stimulates the development and function of granulocytes, we investigated the expression of GH in granulocyte subsets. 1 Since since SCONJ IN _ _ _ _ _ 2 GH GH PROPN NNP Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 development development NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 GH Gh PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 19 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2545 # text = By immunocytochemistry, 25 +/- 7% of the human neutrophils were shown to express immunoreactive GH, whereas eosinophils were negative. 1 By by ADP IN _ _ _ _ _ 2 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 25 25 NUM CD NumType=Card _ _ _ _ 5 +/- +/- SYM SYM _ _ _ _ _ 6 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 express express VERB VB VerbForm=Inf _ _ _ _ 16 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 17 GH Gh NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2546 # text = Reversed transcription (RT)-PCR analysis demonstrated GH mRNA in neutrophils. 1 Reversed reversed ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 PCR Pcr ADJ JJ Degree=Pos _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 GH Gh PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2547 # text = Restriction analysis revealed that neutrophils express the GH-N gene but not the GH-V gene. 1 Restriction restriction NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 6 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GH GH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 N N PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GH GH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 V V PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2548 # text = Furthermore, we demonstrated by western blot analysis that neutrophils express an alternatively spliced variant of the pituitary transcription factor Pit-1, designated Pit-1b. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 western western ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 neutrophils neutrophil VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 express express ADJ JJ Degree=Pos _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 alternatively alternatively ADV RB _ _ _ _ _ 14 spliced splice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 variant variant NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pituitary pituitary ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1b -1b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2549 # text = Document 003001148 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001148 003001148 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2550 # text = Cell growth-regulated expression of mammalian MCM5 and MCM6 genes mediated by the transcription factor E2F. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 growth- growth- PUNCT : _ _ _ _ SpaceAfter=No 3 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 7 MCM5 MCM5 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 MCM6 MCM6 PROPN NNP Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2551 # text = Initiation of DNA replication requires the function of MCM gene products, which participate in ensuring that DNA replication occurs only once in the cell cycle. 1 Initiation Initiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MCM MCm ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 ensuring ensure VERB VBG VerbForm=Ger _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 occurs occur ADV RB _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 once once ADV RB NumType=Mult _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2552 # text = Expression of all mammalian genes of the MCM family is induced by growth stimulation, unlike yeast, and the mRNA levels peak at G1/S boundary. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 MCM MCM PROPN NNP Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 growth growth NOUN NN Number=Sing _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 unlike unlike ADP IN _ _ _ _ _ 17 yeast yeast NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 22 levels levels NOUN NNS Number=Plur _ _ _ _ 23 peak peak NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 G1/S G1/S PROPN NNP Number=Sing _ _ _ _ 26 boundary boundary PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2553 # text = In this study, we examined the transcriptional activities of isolated human MCM gene promoters. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 MCM MCm NOUN NN Number=Sing _ _ _ _ 14 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2554 # text = Human MCM5 and MCM6 promoters with mutation in the E2F sites failed in promoter regulation following serum stimulation and exogenous E2F expression. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 MCM5 MCM5 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 MCM6 MCM6 NUM CD NumType=Card _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 mutation mutation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 F f PROPN NNP Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 failed fail VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 following follow VERB VBG VerbForm=Ger _ _ _ _ 18 serum serum NOUN NN Number=Sing _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 22 E2F E2F PROPN NNP Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2555 # text = In addition, we identified a novel E2F-like sequence in human MCM6 promoter which cooperates with the authentic E2F sites in E2F-dependent regulation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 E2F E2F NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 MCM6 Mcm6 NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 authentic authentic ADJ JJ Degree=Pos _ _ _ _ 21 E2 e2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 F for PROPN NNP Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2556 # text = Forced expression of E2F1 could induce expression of all members of the endogenous MCM genes in rat embryonal fibroblast REF52 cells. 1 Forced forced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 E2F1 E2f1 PROPN NNP Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 14 MCM MCm NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 rat rat NOUN NN Number=Sing _ _ _ _ 18 embryonal embryonal ADV RB _ _ _ _ _ 19 fibroblast fibroblast ADV RBS Degree=Sup _ _ _ _ 20 REF52 Ref52 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2557 # text = Our results demonstrated that the growth-regulated expression of mammalian MCM5 and MCM6 genes, and presumably other MCM members, is primarily regulated by E2F through binding to multiple E2F sites in the promoters. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 12 MCM5 Mcm5 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 MCM6 Mcm6 NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 presumably presumably ADV RB _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 MCM MCm NOUN NN Number=Sing _ _ _ _ 21 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 primarily primarily ADV RB _ _ _ _ _ 25 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 E2F E2F PROPN NNP Number=Sing _ _ _ _ 28 through through SCONJ IN _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 multiple multiple VERB VB VerbForm=Inf _ _ _ _ 32 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 F f PROPN NNP Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2558 # text = Document 003001149 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001149 003001149 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2559 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 2560 # text = A inhibits monocyte tissue factor activation in cardiac transplant recipients. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 3 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 9 transplant transplant NOUN NN Number=Sing _ _ _ _ 10 recipients recipient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2561 # text = BACKGROUND: Fibrin deposition and thrombosis have been implicated in both allograft rejection and vasculopathy after cardiac transplantation. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Fibrin Fibrin ADJ JJ Degree=Pos _ _ _ _ 4 deposition deposition NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 thrombosis thrombosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 allograft allograft NOUN NN Number=Sing _ _ _ _ 13 rejection rejection NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 18 transplantation transplantation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2562 # text = Because monocytes play a pivotal role in the pathophysiology of intravascular coagulation activation through their ability to synthesize tissue factor (TF), we asked (1) whether monocyte TF activation occurs in cardiac transplant recipients and (2) whether monocyte TF expression is affected by treatment with cyclosporin A (CsA). 1 Because because SCONJ IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 12 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 synthesize synthesize VERB VB VerbForm=Inf _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 asked ask VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 1 1 X LS _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 whether whether SCONJ IN _ _ _ _ _ 31 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 32 TF TF NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 occurs occur NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 37 transplant transplant NOUN NN Number=Sing _ _ _ _ 38 recipients recipient NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 2 2 X LS _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 whether whether SCONJ IN _ _ _ _ _ 44 monocyte monocyte VERB VB VerbForm=Inf _ _ _ _ 45 TF TF ADP RP _ _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 treatment treatment NOUN NN Number=Sing _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 53 A a NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 2563 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 2564 # text = We measured levels of TF activity in peripheral blood mononuclear cells and highly purified monocytes/macrophages from 10 consecutive cardiac transplant recipients and 10 healthy control subjects. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TF Tf NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ _ 20 consecutive consecutive ADJ JJ Degree=Pos _ _ _ _ 21 cardiac cardiac NOUN NN Number=Sing _ _ _ _ 22 transplant transplant NOUN NN Number=Sing _ _ _ _ 23 recipients recipient NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 10 10 NUM CD NumType=Card _ _ _ _ 26 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 27 control control NOUN NN Number=Sing _ _ _ _ 28 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2565 # text = TF activity generated by both unstimulated and endotoxin-stimulated cells was significantly higher in transplant recipients than in control subjects (P<.05). 1 TF Tf ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 endotoxin- endotoxin- SYM NFP _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 higher higher ADV RBR Degree=Cmp _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transplant transplant ADJ JJ Degree=Pos _ _ _ _ 16 recipients recipient NOUN NNS Number=Plur _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 subjects subjects NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 .05 .05 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2566 # text = Increased monocyte TF expression in transplant recipients was shown to be adversely affected by treatment with CsA: TF induction was markedly reduced by CsA serum concentrations reaching peak CsA drug levels. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 transplant transplant ADJ JJ Degree=Pos _ _ _ _ 7 recipients recipient NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 adversely adversely ADV RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 TF Tf ADJ JJ Degree=Pos _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 markedly markedly ADV RB _ _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 CsA csa NOUN NN Number=Sing _ _ _ _ 26 serum serum NOUN NN Number=Sing _ _ _ _ 27 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 28 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 29 peak peak NOUN NN Number=Sing _ _ _ _ 30 CsA csa NOUN NN Number=Sing _ _ _ _ 31 drug drug NOUN NN Number=Sing _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2567 # text = Inhibition of TF induction in the presence of high CsA blood concentrations was also observed when stimulation of cells was performed with interferon-gamma or interleukin-1beta. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 high high ADJ JJ Degree=Pos _ _ _ _ 10 CsA csa NOUN NN Number=Sing _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2568 # text = As shown by reverse transcription-polymerase chain reaction and electrophoretic mobility shift assay, respectively, treatment with CsA leads to decreased TF mRNA expression and reduced activation of the NF-kappaB transcription factor, which is known to contribute to the induction of the TF promotor in human monocytes. 1 As as SCONJ IN _ _ _ _ _ 2 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 reaction reaction NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 CsA csa PROPN NNP Number=Sing _ _ _ _ 21 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 decreased decreased VERB VB VerbForm=Inf _ _ _ _ 24 TF TF PROPN NNP Number=Sing _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 TF TF PROPN NNP Number=Sing _ _ _ _ 49 promotor promotor NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 human human ADJ JJ Degree=Pos _ _ _ _ 52 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2569 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 2570 # text = This study demonstrates that TF activation, occurring in mononuclear cells of cardiac transplant recipients, is inhibited by treatment with CsA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TF Tf PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 14 transplant transplant NOUN NN Number=Sing _ _ _ _ 15 recipients recipient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2571 # text = Inhibition of monocyte TF induction by CsA may contribute to its successful use in cardiac transplant medicine and might be useful in managing further settings of vascular pathology also known to involve TF expression and NF-kappaB activation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 4 TF TF NOUN NN Number=Sing _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 CsA csa PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 successful successful ADJ JJ Degree=Pos _ _ _ _ 13 use use NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 16 transplant transplant NOUN NN Number=Sing _ _ _ _ 17 medicine medicine NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 might might AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 useful useful ADJ JJ Degree=Pos _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 managing manag VERB VBG VerbForm=Ger _ _ _ _ 24 further further ADJ JJ Degree=Pos _ _ _ _ 25 settings setting NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 28 pathology pathology NOUN NN Number=Sing _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 involve involve ADJ JJ Degree=Pos _ _ _ _ 33 TF TF PROPN NNP Number=Sing _ _ _ _ 34 expression expression PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2572 # text = Document 003001150 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001150 003001150 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2573 # text = Activation of transcription factor NF-kappa B by phagocytic stimuli in human neutrophils. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2574 # text = Phagocytosis represents an important physiological trigger for the inducible expression of several genes in human neutrophils. 1 Phagocytosis Phagocytosis PROPN NNP Number=Sing _ _ _ _ 2 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 trigger trigger NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2575 # text = Here, we report that a DNA-binding activity primarily consisting of the classical NF-kappa B heterodimer, p50/RelA, is induced in phagocytosing neutrophils. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 primarily primarily ADV RB _ _ _ _ _ 12 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 classical classical ADJ JJ Degree=Pos _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 phagocytosing phagocytose VERB VBG VerbForm=Ger _ _ _ _ 30 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2576 # text = Under these conditions, NF-kappa B activation was found to be a rapid and transient response, reaching a maximum by 10-15 min, and returning to near-basal levels by 30 min. 1 Under under ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 maximum maximum NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 15 15 NUM CD NumType=Card _ _ _ _ 27 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 returning return VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 near near ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 basal basal ADJ JJ Degree=Pos _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 30 30 NUM CD NumType=Card _ _ _ _ 38 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2577 # text = In neutrophils undergoing the phagocytosis of opsonized yeasts, the onset of NF-kappa B activation was paralleled by a decline in immunoreactive I kappa B-alpha protein levels, and the cellular 1 In in ADP IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 opsonized opsonized ADJ JJ Degree=Pos _ _ _ _ 8 yeasts yeast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 onset onset NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 decline decline NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa X GW _ _ _ _ _ 27 B- B- X GW _ _ _ _ SpaceAfter=No 28 alpha alpha X GW _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cellular cellular NOUN NN Number=Sing _ _ _ _ # sent_id = 2578 # text = I kappa B-alpha pool was replenished by 30 min, in agreement with our gel shift data. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X GW _ _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha alpha X GW _ _ _ _ _ 5 pool pool NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 replenished replenish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 30 30 NUM CD NumType=Card _ _ _ _ 10 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 agreement agreement NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 16 gel gel NOUN NN Number=Sing _ _ _ _ 17 shift shift NOUN NN Number=Sing _ _ _ _ 18 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2579 # text = We conclude that NF-kappa B activation could constitute one of the mechanisms whereby the expression of kappa B-responsive genes is enhanced in phagocytosing neutrophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 whereby whereby ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 phagocytosing phagocytose VERB VBG VerbForm=Ger _ _ _ _ 28 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2580 # text = To our knowledge, this represents the first demonstration that phagocytic stimuli can induce NF-kappa B activation in human neutrophils. 1 To to ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 knowledge knowledge NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 12 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2581 # text = Document 003001151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001151 003001151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2582 # text = Binding of erythroid and non-erythroid nuclear proteins to the silencer of the human epsilon-globin-encoding gene. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 silencer silencer NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 encoding encoding NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2583 # text = To clarify the molecular mechanisms involved in the developmental control of hemoglobin-encoding genes we have been studying the expression of these genes in human cells in continuous culture. 1 To to PART TO _ _ _ _ _ 2 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 encoding encoding NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 studying study VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2584 # text = We have previously reported the presence of a transcriptional control element with the properties of a silencer extending from -392 to -177 bp relative to the cap site of the human epsilon-globin-encoding gene [Cao et al., 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 properties property NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 silencer silencer NOUN NN Number=Sing _ _ _ _ 18 extending extend VERB VBG VerbForm=Ger _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 -392 -392 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 177 177 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ _ 25 relative relative ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cap cap NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 encoding encoding NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 Cao Cao PROPN NNP Number=Sing _ _ _ _ 41 et et X FW _ _ _ _ _ 42 al. al. X FW _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ # sent_id = 2585 # text = Proc.Natl.Acad.Sci.USA 86 (1989) 5306-5309]. 1 Proc.Natl.Acad.Sci.USA Proc.Natl.Acad.Sci.USA PROPN NNP Number=Sing _ _ _ _ 2 86 86 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 1989 1989 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 5306 5306 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5309 5309 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2586 # text = We also showed that this silencer has stronger inhibitory activity in HeLa cells, as compared to K562 human erythroleukemia cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 silencer silencer NOUN NN Number=Sing _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 9 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 K562 K562 NUM CD NumType=Card _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2587 # text = Using deletion mutants and cis-cloned synthetic oligodeoxyribonucleotides in transient expression assays, nucleotide sequences responsible for this effect have now been further delimited to 44 bp located from -294 to -251 bp. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 9 oligodeoxyribonucleotides oligodeoxyribonucleotide NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 now now ADV RB _ _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 further further ADV RB _ _ _ _ _ 25 delimited delimit ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 44 44 NUM CD NumType=Card _ _ _ _ 28 bp bp NOUN NN Number=Sing _ _ _ _ 29 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 294 294 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 251 251 NUM CD NumType=Card _ _ _ _ 36 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2588 # text = Gel electrophoresis mobility shift assays and DNaseI footprinting assays demonstrate that these negative regulatory sequences are recognized differently by proteins present in nuclear extracts obtained from HeLa and K562 cells. 1 Gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 electrophoresis electrophoresis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 DNaseI DNaseI NOUN NNS Number=Plur _ _ _ _ 8 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 9 assays assay NOUN NNS Number=Plur _ _ _ _ 10 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 differently differently ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 present present ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extracts extract NOUN NNS Number=Plur _ _ _ _ 25 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 K562 K562 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2589 # text = Two binding proteins are detected in K562 nuclear extracts, while only one is found in extracts from HeLa cells. 1 Two two NUM CD NumType=Card _ _ _ _ 2 binding binding ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 K562 K562 NUM CD NumType=Card _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 while while SCONJ IN _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2590 # text = Possible mechanisms by which these proteins may regulate transcription of the epsilon-globin-encoding gene in erythroid and non-erythroid cells are discussed. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 globin-encoding globin-encoding NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2591 # text = Document 003001152 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001152 003001152 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2592 # text = A novel SP-1 site in the human interleukin-1 beta promoter confers preferential transcriptional activity in keratinocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 confers confer NOUN NNS Number=Plur _ _ _ _ 16 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2593 # text = To investigate the mechanisms of transcriptional activation of interleukin-1beta (IL-1beta) in non-monocytic cells, we constructed a series of reporter plasmids with the bacterial chloramphenicol acetyltransferase gene linked to various parts of the human IL-1beta promoter and performed transient transfection experiments. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 non-monocytic non-monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 constructed construct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 series series NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 32 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 33 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 various various ADJ JJ Degree=Pos _ _ _ _ 38 parts part NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 beta beta NOUN NN Number=Sing _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 transient transient ADJ JJ Degree=Pos _ _ _ _ 50 transfection transfection NOUN NN Number=Sing _ _ _ _ 51 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2594 # text = We identified a promoter segment that activates transcription most efficiently in keratinocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 segment segment NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 most most ADV RBS _ _ _ _ _ 10 efficiently efficiently ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2595 # text = Electrophoretic mobility shift assays (EMSA) with a 43-mer oligonucleotide derived from the functionally identified cis-acting element revealed specific complexes. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 43 43 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mer mer NOUN NN Number=Sing _ _ _ _ 13 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 functionally functionally ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cis-acting cis-act ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2596 # text = By competition analysis with transcription factor consensus sequence oligonucleotides and by immunosupershift, transcription factor SP-1 or a closely related protein was shown to bind to this regulatory element. 1 By by ADP IN _ _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 consensus consensus NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 immunosupershift immunosupershift NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 closely closely ADV RB _ _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 bind bind VERB VB VerbForm=Inf _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2597 # text = The closest match to the known SP-1 consensus sequence within the respective region is a TCCCCTCCCCT motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 closest closest ADJ JJS Degree=Sup _ _ _ _ 3 match match NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 respective respective ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 TCCCCTCCCCT Tcccctcccct NOUN NN Number=Sing _ _ _ _ 19 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2598 # text = Mutation of this motif almost completely, and specifically, abolished the binding of two low-mobility complexes and led to a 95% decrease of constitutive transcriptional activation of a reporter construct IL-1beta (-170/+108). 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 motif motif NOUN NN Number=Sing _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 completely completely ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 complexes complex NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ _ 26 decrease decrease NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 construct construct NOUN NN Number=Sing _ _ _ _ 35 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 (- (- PUNCT . _ _ _ _ SpaceAfter=No 40 170 170 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 /+ /+ SYM SYM _ _ _ _ SpaceAfter=No 42 108 108 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2599 # text = Likewise, activation of this reporter construct by tumor necrosis factor-alpha depended on the SP-1 site. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 construct construct NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 depended depend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2600 # text = These observations suggest that a so-far-unrecognized SP-1 site in the human IL-1beta promoter may participate in the transcriptional regulation of this gene in keratinocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 so so ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 far- far- SYM SYM _ _ _ _ SpaceAfter=No 9 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 10 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bet bet NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 participate participate VERB VB VerbForm=Inf _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2601 # text = Document 003001153 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001153 003001153 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2602 # text = Multifactor cis-dominant negative regulation of IL-2 gene expression in anergized T cells. 1 Multifactor Multifactor NOUN NN Number=Sing _ _ _ _ 2 cis cis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 -dominant -dominant ADJ JJ Degree=Pos _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 anergized anergized ADJ JJ Degree=Pos _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2603 # text = The molecular mechanism underlying IL-2 transcriptional blockade in anergic T cell clones is not fully understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 blockade blockade NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 fully fully ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2604 # text = To examine whether an active negative regulatory process occurs, we created a reporter construct containing as an enhancer four copies of the NF-AT site and one copy of the octamer site (4X NF-AT-Oct). 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 process process NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 created create VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 construct construct NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 four four NUM CD NumType=Card _ _ _ _ 21 copies copy NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 AT AT PROPN NNP Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ _ 30 copy copy NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 octamer octamer ADJ JJR Degree=Cmp _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 4X 4X PROPN NNP Number=Sing _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2605 # text = This construct was only slightly reduced (1.3-fold) in its expression when stimulated under anergic conditions, while a whole mouse IL-2 enhancer construct showed a reduction of 4.3-fold. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 construct construct NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 slightly slightly ADV RB _ _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 1.3 1.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 19 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 whole whole ADJ JJ Degree=Pos _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 reduction reduction NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 4.3 4.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2606 # text = Addition of the -176 to -96 sequence to the 4X NF-AT-Oct construct did not impart the ability to be affected by anergy, but addition of the -236 to -96 sequence did, demonstrating that anergy is an active inhibitory process and that more than the presence of the -150 AP-1 binding site (-152 to -147) is required to mediate the effect. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 176 176 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 96 96 NUM CD NumType=Card _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 4X 4X PROPN NNP Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Oct Oct PROPN NNP Number=Sing _ _ _ _ 18 construct construct NOUN NN Number=Sing _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 impart impart VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 addition addition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 236 236 NUM CD NumType=Card _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 96 96 NUM CD NumType=Card _ _ _ _ 39 sequence sequence NOUN NN Number=Sing _ _ _ _ 40 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 43 that that SCONJ IN _ _ _ _ _ 44 anergy anergy NOUN NN Number=Sing _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 active active ADJ JJ Degree=Pos _ _ _ _ 48 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 49 process process NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 that that SCONJ IN _ _ _ _ _ 52 more more ADJ JJR Degree=Cmp _ _ _ _ 53 than than ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 presence presence NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 - - SYM SYM _ _ _ _ SpaceAfter=No 59 150 150 NUM CD NumType=Card _ _ _ _ 60 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 - - SYM SYM _ _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 binding binding VERB VBG VerbForm=Ger _ _ _ _ 64 site site NOUN NN Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 - - SYM SYM _ _ _ _ SpaceAfter=No 67 152 152 NUM CD NumType=Card _ _ _ _ 68 to to ADP IN _ _ _ _ _ 69 - - SYM SYM _ _ _ _ SpaceAfter=No 70 147 147 NUM CD NumType=Card _ _ _ SpaceAfter=No 71 ) ) PUNCT -RRB- _ _ _ _ _ 72 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 73 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 74 to to PART TO _ _ _ _ _ 75 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 2607 # text = Mutational studies of the -236 to -96 sequence indicated that the presence of both the -130 AP-1-like site (-187 to -181) and the -150 proximal AP-1 site were necessary to observe anergy. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 236 236 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 96 96 NUM CD NumType=Card _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 130 130 NUM CD NumType=Card _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 187 187 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 181 181 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 150 150 NUM CD NumType=Card _ _ _ _ 37 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ _ 42 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 observe observe VERB VB VerbForm=Inf _ _ _ _ 46 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2608 # text = Because the -180 site is not required for trans-activation, it was possible to confirm by mutation in the normal mouse IL-2 enhancer that this site is absolutely essential for anergy induction. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 180 180 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 possible possible ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 mutation mutation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 absolutely absolutely ADV RB _ _ _ _ _ 33 essential essential ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 anergy anergy NOUN NN Number=Sing _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2609 # text = The simplest model to explain these results is that anergy is mediated by a complex of multiple transcription factors that exert a cis-acting dominant negative regulatory effect on the trans-activation of the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 simplest simplest ADJ JJS Degree=Sup _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 explain explain VERB VB VerbForm=Inf _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 anergy anergy NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 acting act VERB VBG VerbForm=Ger _ _ _ _ 26 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2610 # text = Document 003001154 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001154 003001154 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2611 # text = Disruption of alpha beta but not of gamma delta 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 delta delta NOUN NN Number=Sing _ _ _ _ # sent_id = 2612 # text = T cell development by overexpression of the helix-loop-helix protein Id3 in committed T cell progenitors. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 development development NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 helix helix NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 committed committed ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2613 # text = Enforced expression of Id3, which has the capacity to inhibit many basic helix-loop-helix (bHLH) transcription factors, in human CD34(+) hematopoietic progenitor cells that have not undergone T cell receptor (TCR) gene rearrangements inhibits development of the transduced cells into TCRalpha beta and gamma delta cells in a fetal thymic organ culture (FTOC). 1 Enforced Enforced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 many many ADJ JJ Degree=Pos _ _ _ _ 13 basic basic ADJ JJ Degree=Pos _ _ _ _ 14 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 helix helix NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 + + SYM SYM _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 30 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 undergone undergone ADJ JJ Degree=Pos _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 44 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 45 development development NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 transduced transduced ADJ JJ Degree=Pos _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 into into ADP IN _ _ _ _ _ 51 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 52 beta beta NOUN NN Number=Sing _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 gamma gamma NOUN NN Number=Sing _ _ _ _ 55 delta delta NOUN NN Number=Sing _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 60 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 61 organ organ ADJ JJ Degree=Pos _ _ _ _ 62 culture culture NOUN NN Number=Sing _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 2614 # text = Here we document that overexpression of Id3, in progenitors that have initiated TCR gene rearrangements (pre-T cells), inhibits development into TCRalpha beta but not into TCRgamma delta T cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 document document VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TCR Tcr ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 23 development development VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 26 beta beta PROPN NNP Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 TCRgamma TCRgamma PROPN NNP Number=Sing _ _ _ _ 31 delta delta PROPN NNP Number=Sing _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2615 # text = Furthermore, Id3 impedes expression of recombination activating genes and downregulates pre-Talpha mRNA. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Id3 Id3 NUM CD NumType=Card _ _ _ _ 4 impedes impede NOUN NNS Number=Plur _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 recombination recombination NOUN NN Number=Sing _ _ _ _ 8 activating activate VERB VBG VerbForm=Ger _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 downregulates downregulate NOUN NNS Number=Plur _ _ _ _ 12 pre-Talpha pre-Talpha PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2616 # text = These observations suggest possible mechanisms by which Id3 overexpression can differentially affect development of pre-T cells into TCRalpha beta and gamma delta cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which DET WDT PronType=Int _ _ _ _ 8 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 9 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 differentially differentially ADV RB _ _ _ _ _ 12 affect affect VERB VB VerbForm=Inf _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 19 beta beta PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 gamma gamma PROPN NNP Number=Sing _ _ _ _ 22 delta delta PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2617 # text = We also observed that cell surface CD4(-)CD8(-)CD3(-) cells with rearranged TCR genes developed from Id3-transduced but not from control-transduced pre-T cells in an FTOC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 -) -) PUNCT . _ _ _ _ SpaceAfter=No 10 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 -) -) PUNCT . _ _ _ _ SpaceAfter=No 13 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 (-) (-) PUNCT . _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2618 # text = These cells had properties of both natural killer (NK) and pre-T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 properties property NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 natural natural ADJ JJ Degree=Pos _ _ _ _ 8 killer killer NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2619 # text = These findings suggest that bHLH factors are required to control T cell development after the T/NK developmental checkpoint. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 bHLH bhlh DET DT _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 control control VERB VB VerbForm=Inf _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T/ t/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 NK NK PROPN NNP Number=Sing _ _ _ _ 18 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 19 checkpoint checkpoint NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2620 # text = Document 003001155 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001155 003001155 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2621 # text = Human CD3-CD16+ natural killer cells express the hGATA-3 T cell transcription factor and an unrearranged 2.3-kb TcR delta transcript. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 CD3-CD Cd3-cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ _ 5 natural natural ADJ JJ Degree=Pos _ _ _ _ 6 killer killer NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -3 -3 NUM CD NumType=Card _ _ _ _ 12 T t NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 19 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kb kb NOUN NN Number=Sing _ _ _ _ 22 TcR TcR NOUN NN Number=Sing _ _ _ _ 23 delta delta ADP IN Abbr=Yes _ _ _ _ 24 transcript transcriep NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2622 # text = In this study we analyzed the T cell receptor(TcR) delta transcripts expressed by CD3-CD16+ cells and we investigated whether these cells expressed the hGATA-3 T cell transcription factor and the recombination-activating gene (RAG)-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 delta delof NOUN NN Number=Sing _ _ _ _ 14 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 CD3-CD Cd3-cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 hGATA hGATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -3 -3 NUM CD NumType=Card _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 activating activate VERB VBG VerbForm=Ger _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 RAG RAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2623 # text = Multiple TcR delta transcripts deriving from an unrearranged TcR delta gene were detected in both polyclonal and clonal CD3-CD16+ natural killer(NK) cell lines. 1 Multiple multiple PROPN NNP Number=Sing _ _ _ _ 2 TcR TcR PROPN NNP Number=Sing _ _ _ _ 3 delta delta PROPN NNP Number=Sing _ _ _ _ 4 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 5 deriving derive VERB VBG VerbForm=Ger _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 9 TcR Tcr PROPN NNP Number=Sing _ _ _ _ 10 delta delof PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 19 CD3- Cd3- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 natural natural ADJ JJ Degree=Pos _ _ _ _ 24 killer killer NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2624 # text = Two unrearranged TcR delta transcripts had a size similar to that of the functional TcR delta mRNA (2.3 and 1.3 kb) found in TcR gamma/delta+ 1 Two two NUM CD NumType=Card _ _ _ _ 2 unrearranged unrearrang ADJ JJ Degree=Pos _ _ _ _ 3 TcR TcR NOUN NN Number=Sing _ _ _ _ 4 delta delta NOUN NN Number=Sing _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 size size NOUN NN Number=Sing _ _ _ _ 9 similar similar ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 TcR TcR PROPN NNP Number=Sing _ _ _ _ 16 delta delta PROPN NNP Number=Sing _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 2.3 2.3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 1.3 1.3 NUM CD NumType=Card _ _ _ _ 22 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 TcR TcR PROPN NNP Number=Sing _ _ _ _ 27 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 + + SYM NFP _ _ _ _ _ # sent_id = 2625 # text = T lymphocytes. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 2626 # text = Sequence analysis of nine different 2.3-kb cDNA clones obtained from NK-derived polyA+ 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nine nine NUM CD NumType=Card _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kb kb NOUN NN Number=Sing _ _ _ _ 9 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 10 clones clone NOUN NNS Number=Plur _ _ _ _ 11 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 polyA polya NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ # sent_id = 2627 # text = RNA confirmed that they corresponded to an unrearranged TcR delta gene. 1 RNA RNA PROPN NNP Number=Sing _ _ _ _ 2 confirmed confirm VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 corresponded correspond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 9 TcR Tcr NOUN NN Number=Sing _ _ _ _ 10 delta delof NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2628 # text = These cDNA were 2343 bp long and their transcription initiation site was located 814 bp upstream from the J delta 1 segment. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 2343 2343 NUM CD NumType=Card _ _ _ _ 5 bp bp ADV RB _ _ _ _ _ 6 long long ADV RB Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 initiation initiation NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 814 814 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 J j PROPN NNP Number=Sing _ _ _ _ 20 delta delta NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 segment segment NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2629 # text = The sequence located upstream of the J delta 1 segment corresponded to the previously reported germ-line sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 upstream upstream NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 J j PROPN NNP Number=Sing _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 segment segment NOUN NN Number=Sing _ _ _ _ 11 corresponded correspond VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 previously previously ADV RB _ _ _ _ _ 15 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 germ germ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 line line NOUN NN Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2630 # text = The J delta 1 segment was correctly spliced to C delta; in addition the four C delta exons were found to be already assembled. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 J j PROPN NNP Number=Sing _ _ _ _ 3 delta delta PROPN NNP Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 segment segment NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 correctly correctly ADV RB _ _ _ _ _ 8 spliced splice VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 four four NUM CD NumType=Card _ _ _ _ 17 C C NOUN NN Number=Sing _ _ _ _ 18 delta delta PART TO Abbr=Yes _ _ _ _ 19 exons exon NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 already already ADV RB _ _ _ _ _ 25 assembled assemble VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2631 # text = Two polyadenylation sites were present in the fourth C delta exon. 1 Two two NUM CD NumType=Card _ _ _ _ 2 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 fourth fourth ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ _ 10 delta delta PROPN NNP Number=Sing _ _ _ _ 11 exon exon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2632 # text = However, only that located at the 3' end appeared to be utilized in the 2.3-kb cDNA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PART POS _ _ _ _ _ 10 end end NOUN NN Number=Sing _ _ _ _ 11 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kb kb NOUN NN Number=Sing _ _ _ _ 20 cDNA cDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2633 # text = The expression of hGATA-3, a T cell-specific factor known to be involved in the regulation of the transcription of TcR delta locus, was analyzed by Northern blot, in cultured NK cell population and clones (but not in freshly derived cell populations). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 TcR TcR PROPN NNP Number=Sing _ _ _ _ 26 delta delta PROPN NNP Number=Sing _ _ _ _ 27 locus locus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 Northern northern PROPN NNP Number=Sing _ _ _ _ 33 blot blot ADV RB _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 NK NK PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 population population NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 clones clone NOUN NNS Number=Plur _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 but but CCONJ CC _ _ _ _ _ 44 not not PART RB _ _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 freshly freshly ADV RB _ _ _ _ _ 47 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2634 # text = All NK clones and cell lines studied were found to express hGATA-3-specific mRNA, suggesting that hGATA-3 may be involved in the regulation of the unrearranged TcR delta gene expression in NK cells. 1 All all DET DT _ _ _ _ _ 2 NK NK PROPN NNP Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 express express VERB VB VerbForm=Inf _ _ _ _ 12 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 33 TcR TcR NOUN NN Number=Sing _ _ _ _ 34 delta delta NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 NK NK PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2635 # text = Finally, no transcription of the RAG-1 gene could be detected in all NK cell lines or clones analyzed. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 RAG RAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 NK NK PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 clones clone NOUN NNS Number=Plur _ _ _ _ 21 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2636 # text = Document 003001156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001156 003001156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2637 # text = NF-AT activation induced by a CAML-interacting member of the tumor necrosis factor receptor superfamily. 1 NF Nf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 AT at ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 CAML caml NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 interacting interacting VERB VBG VerbForm=Ger _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2638 # text = Activation of the nuclear factor of activated T cells transcription factor (NF-AT) is a key event underlying lymphocyte action. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 key key ADJ JJ Degree=Pos _ _ _ _ 20 event event NOUN NN Number=Sing _ _ _ _ 21 underlying underly ADJ JJ Degree=Pos _ _ _ _ 22 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 23 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2639 # text = The CAML (calcium-modulator and cyclophilin ligand) protein is a coinducer of NF-AT activation when overexpressed in Jurkat T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CAML caml NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 modulator modulator NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 coinducer coinducer NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT AT PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2640 # text = A member of the tumor necrosis factor receptor superfamily was isolated by virtue of its affinity for CAML. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 member member NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 superfamily superfamily ADV RB _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 virtue virtue NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 affinity affinity NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2641 # text = Cross-linking of this lymphocyte-specific protein, designated TACI (transmembrane activator and CAML-interactor), on the surface of transfected Jurkat cells with TACI-specific antibodies led to activation of the transcription factors NF-AT, AP-1, and NFkappaB. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 TACI Taci NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CAML caml NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 interactor interactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 surface surface NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 TACI TACI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 34 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2642 # text = TACI-induced activation of NF-AT was specifically blocked by a dominant-negative CAML mutant, thus implicating CAML as a signaling intermediate. 1 TACI Taci NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 negative negative ADJ JJ Degree=Pos _ _ _ _ 17 CAML caml NOUN NN Number=Sing _ _ _ _ 18 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 22 CAML CAML NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 intermediate intermediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2643 # text = Document 003001157 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001157 003001157 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2644 # text = Distinct mechanisms for N-acetylcysteine inhibition of cytokine-induced E-selectin and VCAM-1 expression. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 selectin selectin NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2645 # text = We have examined the effects of N-acetyl-L-cysteine (NAC), a well-characterized, thiol-containing antioxidant, on agonist-induced monocytic cell adhesion to endothelial cells (EC). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -L -l NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 thiol thiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 containing containing VERB VBG VerbForm=Ger _ _ _ _ 24 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2646 # text = NAC inhibited interleukin-1 (IL-1 beta)-induced, but not basal, adhesion with 50% inhibition at approximately 20 mM. 1 NAC NAC X LS _ _ _ _ _ 2 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 basal basal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 approximately approximately ADV RB _ _ _ _ _ 26 20 20 NUM CD NumType=Card _ _ _ _ 27 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2647 # text = Monocytic cell adhesion to EC in response to tumor necrosis factor-alpha (TNF-alpha), lipopolysaccharide (LPS), alpha-thrombin, or phorbol 12-myristate 13-acetate (PMA) was similarly inhibited by NAC. 1 Monocytic Monocytic ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 26 -thrombin -thrombin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT : _ _ _ _ SpaceAfter=No 32 myristate myristate NOUN NN Number=Sing _ _ _ _ 33 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 acetate acetate NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 similarly similarly ADV RB _ _ _ _ _ 41 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2648 # text = Unlike published studies with pyrrolidinedithiocarbamate, which specifically inhibited vascular cell adhesion molecule 1 (VCAM-1), NAC inhibited IL-1 beta-induced mRNA and cell surface expression of both E-selectin and VCAM-1. 1 Unlike unlike ADP IN _ _ _ _ _ 2 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NAC NAC PROPN NNP Number=Sing _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 selectin selectin NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2649 # text = NAC had no effect on the half-life of E-selectin or VCAM-1 mRNA. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 life life NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2650 # text = Although NAC reduced nuclear factor-kappa B (NF-kappa B) activation in EC as measured by gel-shift assays using an oligonucleotide probe corresponding to the consensus NF-kappa B binding sites of the VCAM-1 gene (VCAM-NF-kappa B), the antioxidant had no appreciable effect when an oligomer corresponding to the consensus NF-kappa B binding site of the E-selectin gene (E-selectin-NF-kappa B) was used. 1 Although although SCONJ IN _ _ _ _ _ 2 NAC NAC PROPN NNP Number=Sing _ _ _ _ 3 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 EC EC PROPN NNP Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 shift shift NOUN NN Number=Sing _ _ _ _ 24 assays assay NOUN NNS Number=Plur _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 28 probe probe NOUN NN Number=Sing _ _ _ _ 29 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 consensus consensus NOUN NN Number=Sing _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 binding bind VERB VBG VerbForm=Ger _ _ _ _ 38 sites site NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 kappa kappa NOUN NN Number=Sing _ _ _ _ 51 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 56 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 57 no no DET DT _ _ _ _ _ 58 appreciable appreciable ADJ JJ Degree=Pos _ _ _ _ 59 effect effect NOUN NN Number=Sing _ _ _ _ 60 when when ADV WRB PronType=Int _ _ _ _ 61 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 63 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 64 to to ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 consensus consensus NOUN NN Number=Sing _ _ _ _ 67 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 kappa kappa NOUN NN Number=Sing _ _ _ _ 70 B b NOUN NN Number=Sing _ _ _ _ 71 binding bind VERB VBG VerbForm=Ger _ _ _ _ 72 site site NOUN NN Number=Sing _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 the the DET DT Definite=Def|PronType=Art _ _ _ _ 75 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 selectin selectin NOUN NN Number=Sing _ _ _ _ 77 gene gene NOUN NN Number=Sing _ _ _ _ 78 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 79 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 82 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 84 kappa kappa NOUN NN Number=Sing _ _ _ _ 85 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 86 ) ) PUNCT -RRB- _ _ _ _ _ 87 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 88 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 89 . . PUNCT . _ _ _ _ _ # sent_id = 2651 # text = Because NF-kappa 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 2652 # text = B has been reported to be redox sensitive, we studied the effects of NAC on the EC redox environment. 1 B b NOUN NN Number=Sing _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 redox redox ADV RB _ _ _ _ _ 8 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NAC NAC PROPN NNP Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ _ 19 redox redox NOUN NN Number=Sing _ _ _ _ 20 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2653 # text = NAC caused an expected dramatic increase in the reduced glutathione (GSH) levels in EC. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 GSH GSH NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2654 # text = In vitro studies demonstrated that whereas the binding affinity of NF-kappa B to the VCAM-NF-kappa B oligomer peaked at a GSH-to-oxidized glutathione (GSSG) ratio of approximately 200 and decreased at higher ratios, the binding to the E-selectin-NF-kappa B oligomer appeared relatively unaffected even at ratios > 400, i.e., those achieved in EC treated with 40 mM NAC. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 whereas whereas SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 24 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 to to ADP IN _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 ratio ratio NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 approximately approximately ADV RB _ _ _ _ _ 39 200 200 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 at at ADP IN _ _ _ _ _ 43 higher higher ADJ JJR Degree=Cmp _ _ _ _ 44 ratios ratio NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 binding binding VERB VBG VerbForm=Ger _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa PROPN NNP Number=Sing _ _ _ _ 55 B b PROPN NNP Number=Sing _ _ _ _ 56 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 57 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 58 relatively relatively ADV RB _ _ _ _ _ 59 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 60 even even ADV RB _ _ _ _ _ 61 at at ADP IN _ _ _ _ _ 62 ratios ratio NOUN NNS Number=Plur _ _ _ _ 63 > > PUNCT , _ _ _ _ _ 64 400 400 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 69 achieved achieve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 70 in in ADP IN _ _ _ _ _ 71 EC EC PROPN NNP Number=Sing _ _ _ _ 72 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 73 with with ADP IN _ _ _ _ _ 74 40 40 NUM CD NumType=Card _ _ _ _ 75 mM mm PROPN NNP Number=Sing _ _ _ _ 76 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 . . PUNCT . _ _ _ _ _ # sent_id = 2655 # text = These results suggest that NF-kappa B binding to its consensus sequences in the VCAM-1 and E-selectin gene exhibits marked differences in redox sensitivity, allowing for differential gene expression regulated by the same transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 E- E- SYM SYM _ _ _ _ SpaceAfter=No 21 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 exhibits exhibit NOUN NNS Number=Plur _ _ _ _ 24 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differences difference NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 redox redox NOUN NN Number=Sing _ _ _ _ 28 sensitivity sensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 differential differential ADJ JJ Degree=Pos _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 same same ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2656 # text = Our data also demonstrate that NAC increases the GSH-to-GSSG ratio within the EC suggesting one possible mechanism through which this antioxidant inhibits agonist-induced monocyte adhesion to EC. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NAC NAC PROPN NNP Number=Sing _ _ _ _ 7 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 to to ADP IN _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 14 ratio ratio NOUN NN Number=Sing _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 EC EC PROPN NNP Number=Sing _ _ _ _ 18 suggesting suggest NOUN NN Number=Sing _ _ _ _ 19 one one NUM CD NumType=Card _ _ _ _ 20 possible possible ADJ JJ Degree=Pos _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 26 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2657 # text = Document 003001158 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001158 003001158 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2658 # text = Dual effects of LPS antibodies on cellular uptake of LPS and LPS-induced proinflammatory functions. 1 Dual dual ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 5 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 uptake uptake NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LPS LPS NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2659 # text = Human phagocytes recognize bacterial LPS (endotoxin) through membrane CD14 (mCD14), a proinflammatory LPS receptor. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 3 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 5 LPS Lps NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 LPS Lps NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2660 # text = This study tested the hypothesis that anti-LPS 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 anti-LPS anti-LPS X ADD _ _ _ _ _ # sent_id = 2661 # text = Abs neutralize endotoxin by blocking cellular uptake through mCD14. 1 Abs Ab NOUN NNS Number=Plur _ _ _ _ 2 neutralize neutralize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 endotoxin endotoxin ADV RB _ _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 blocking block VERB VBG VerbForm=Ger _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 uptake uptake NOUN NN Number=Sing _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 mCD mCD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2662 # text = Ab-associated changes in the uptake and cellular distribution of FITC-LPS were assessed by flow cytometry and laser scanning confocal microscopy in human CD14-transfected Chinese hamster ovary fibroblasts (CHO-CD14 cells) and human peripheral blood monocytes. 1 Ab- Ab- SYM NFP _ _ _ _ SpaceAfter=No 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 uptake uptake NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 distribution distribution NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 FITC FITC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 LPS LPS PROPN NNP Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 flow flow NOUN NN Number=Sing _ _ _ _ 18 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 laser laser NOUN NN Number=Sing _ _ _ _ 21 scanning scan VERB VBG VerbForm=Ger _ _ _ _ 22 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 23 microscopy microscopy NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -transfected -transfect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 29 hamster hamster NOUN NN Number=Sing _ _ _ _ 30 ovary ovary ADJ JJ Degree=Pos _ _ _ _ 31 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 CHO Cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 14 14 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 42 blood blood NOUN NN Number=Sing _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2663 # text = LPS core- and O-side chain-specific mAbs inhibited mCD14-mediated LPS uptake by both cell types in the presence of serum. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 O- O- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 side side NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 mCD14 mcd14 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -mediated -mediate ADJ JJ Degree=Pos _ _ _ _ 14 LPS Lp NOUN NNS Number=Plur _ _ _ _ 15 uptake uptake VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2664 # text = O-side chain-specific mAb concurrently enhanced complement-dependent LPS uptake by monocytes through complement receptor-1 (CR1) and uptake by CHO-CD14 cells involving another heat-labile serum factor(s) and cell-associated recognition molecule(s). 1 O of INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 side side NOUN NN Number=Sing _ _ _ _ 4 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 concurrently concurrently ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 complement complement NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lps NOUN NN Number=Sing _ _ _ _ 14 uptake uptake NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 complement complement NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CR1 Cr1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 uptake uptake NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 14 14 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 involving involve VERB VBG VerbForm=Ger _ _ _ _ 34 another another DET DT _ _ _ _ _ 35 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 labile labile NOUN NN Number=Sing _ _ _ _ 38 serum serum NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 s s X AFX _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 recognition recognition NOUN NN Number=Sing _ _ _ _ 48 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 s s X AFX _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2665 # text = Core-specific mAb inhibited mCD14-mediated uptake of homologous and heterologous LPS, while producing less concurrent enhancement of non-mCD14-mediated LPS uptake. 1 Core- Core- SYM NFP _ _ _ _ SpaceAfter=No 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 mAb mAb PROPN NNP Number=Sing _ _ _ _ 4 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 uptake uptake NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 producing produce VERB VBG VerbForm=Ger _ _ _ _ 17 less less ADJ JJR Degree=Cmp _ _ _ _ 18 concurrent concurrent ADJ JJ Degree=Pos _ _ _ _ 19 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 non-mCD14 non-mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 23 LPS Lp NOUN NN Number=Sing _ _ _ _ 24 uptake uptake NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2666 # text = The modulation by anti-LPS mAbs of mCD14-mediated LPS uptake was associated with inhibition of LPS-induced nuclear factor-kappaB (NF-kappaB) translocation and TNF-alpha secretion in CHO-CD14 cells and monocytes, respectively, while mAb enhancement of non-mCD14-mediated LPS uptake stimulated these activities. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 anti-LPS anti-LPS ADJ JJ Degree=Pos _ _ _ _ 5 mAbs mAbs NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 LPS Lps PROPN NNP Number=Sing _ _ _ _ 10 uptake uptake PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 translocation translocation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 secretion secretion NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 14 14 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 while while SCONJ IN _ _ _ _ _ 46 mAb mAb PROPN NNP Number=Sing _ _ _ _ 47 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 non-mCD14 non-mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 51 LPS Lp NOUN NNS Number=Plur _ _ _ _ 52 uptake uptake NOUN NN Number=Sing _ _ _ _ 53 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 55 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 2667 # text = LPS-specific 1 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2668 # text = Abs thus mediate anti-inflammatory and proinflammatory functions, respectively, by preventing target cell uptake of LPS through mCD14 and augmenting uptake through CR1 or other cell receptors. 1 Abs Ab ADV RB _ _ _ _ _ 2 thus thus ADV RB _ _ _ _ _ 3 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 7 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 13 target target NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 uptake uptake NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 22 uptake uptake NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 CR1 Cr1 PROPN NNP Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2669 # text = Document 003001159 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001159 003001159 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2670 # text = Increased IkappaB expression and diminished nuclear NF-kappaB in human mononuclear cells following hydrocortisone injection. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 hydrocortisone hydrocortisone ADJ JJ Degree=Pos _ _ _ _ 16 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2671 # text = We have recently demonstrated that hydrocortisone and other glucocorticoids inhibit reactive oxygen species (ROS) generation by mononuclear (MNC) and polymorphonuclear leucocytes (PMNL). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 10 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 12 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ROS ROS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 generation generation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 MNC MNC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 25 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PMNL PMNL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2672 # text = Since NF-kappaB/IkappaB system regulates the transcription of proinflammatory genes, including those responsible for ROS generation, we tested the hypothesis that hydrocortisone may stimulate IkappaB production thus inhibiting NF-kappaB translocation from the cytosol into the nucleus in MNC, in vivo. 1 Since since ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 ROS Ros NOUN NN Number=Sing _ _ _ _ 20 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 hydrocortisone hydrocortisone PRON NN Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 30 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 thus thus ADV RB _ _ _ _ _ 33 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 translocation translocation NOUN NN Number=Sing _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 41 into into ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 MNC MNC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2673 # text = One hundred milligram of hydrocortisone was injected intravenously into 4 normal subjects. 1 One one NUM CD NumType=Card _ _ _ _ 2 hundred hundred NUM CD NumType=Card _ _ _ _ 3 milligram milligram NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 injected inject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 intravenously intravenously ADV RB _ _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 4 4 NUM CD NumType=Card _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2674 # text = Blood samples were obtained prior to the injection and at 1, 2, 4, 8 and 24 hr after the injection. 1 Blood Blood ADJ JJ Degree=Pos _ _ _ _ 2 samples sample NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 prior prior ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 injection injection NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 8 8 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 hr hr NOUN NN Number=Sing _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2675 # text = Nuclear extracts and total cell lysates were prepared from MNC by standard techniques. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 total total ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 MNC MNC PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 standard standard ADJ JJ Degree=Pos _ _ _ _ 13 techniques technique NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2676 # text = IkappaB 1 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ # sent_id = 2677 # text = levels in MNC homogenates increased at 1 hr, peaked at 2-4 hr, started to decrease at 8 hr, and returned to baseline levels at 24 hr. 1 levels level NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 MNC MNC PROPN NNP Number=Sing _ _ _ _ 4 homogenates homogenate NOUN NNS Number=Plur _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 started start VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 8 8 NUM CD NumType=Card _ _ _ _ 22 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 returned return VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 baseline baseline NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 24 24 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2678 # text = NF-kappaB in MNC nuclear extracts decreased at 1 hr, reached a nadir at 4 hr, gradually increased at 8 hr and returned back to baseline levels at 24 hr. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 MNC MNC PROPN NNP Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 nadir nadir NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 4 4 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 gradually gradually ADV RB _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 8 8 NUM CD NumType=Card _ _ _ _ 24 hr hr NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 back back ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 baseline baseline NOUN NN Number=Sing _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 24 24 NUM CD NumType=Card _ _ _ _ 33 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2679 # text = The total protein content of NF-kappaB subunit (P65) in MNC lysates also showed a decrease following hydrocortisone injection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 total total ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 content content NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 MNC MNC PROPN NNP Number=Sing _ _ _ _ 15 lysates lysates PROPN NNP Number=Sing _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 decrease decrease NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 hydrocortisone hydrocortisone ADJ JJ Degree=Pos _ _ _ _ 22 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2680 # text = This decrease was observed at 2 hr, reached a nadir at 4 hr, and returned to baseline levels at 24 hr. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 decrease decrease NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 nadir nadir NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ _ 14 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 baseline baseline VERB VB VerbForm=Inf _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 24 24 NUM CD NumType=Card _ _ _ _ 23 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2681 # text = ROS generation inhibition paralleled NF-kappaB levels in the nucleus. 1 ROS Ros NOUN NN Number=Sing _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 paralleled parallel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2682 # text = It was inhibited at 1 hr, reached a nadir at 2-4 hr, started to increase at 8 hr, and returned to basal levels at 24 hr. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nadir nadir NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 started start VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 8 8 NUM CD NumType=Card _ _ _ _ 22 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 returned return VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 basal basal ADJ JJ Degree=Pos _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 24 24 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2683 # text = Our data demonstrate that hydrocortisone induces IkappaB and suppresses NF-kappaB expression in MNC in parallel. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 hydrocortisone hydrocortisone PRON NN Number=Sing _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 MNC MNC PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2684 # text = IkappaB further reduces the translocation of NF-kappaB into the nucleus thus preventing the expression of proinflammatory genes. 1 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 13 thus thus ADV RB _ _ _ _ _ 14 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2685 # text = Document 003001160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001160 003001160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2686 # text = Anaphylatoxins C5a and C3a induce nuclear factor kappaB activation in human peripheral blood monocytes. 1 Anaphylatoxins Anaphylatoxins PROPN NNP Number=Sing _ _ _ _ 2 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 induce induce NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappaB kappab NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2687 # text = The anaphylatoxins C5a and C3a are involved in the regulation of cytokine production. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anaphylatoxins anaphylatoxin NOUN NNS Number=Plur _ _ _ _ 3 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 a a NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2688 # text = In this study the capability of C5a and C3a to induce transcription factor activation was examined. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 capability capability NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 C3a C3a PROPN NNP Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2689 # text = C5a and C3a stimulation of human peripheral blood monocytes resulted in nuclear expression of a DNA binding activity with specificity to the kappaB sequence. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2690 # text = The p50 and p65 proteins, constituents of the prototypic nuclear factor kappaB, were identified as components of the DNA-protein complexes by anti-peptide antibodies in gel supershift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 p50 p50 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 constituents constituent NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 prototypic prototypic ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 components component NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 complexes complex NOUN NNS Number=Plur _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 anti-peptide anti-peptide ADJ JJ Degree=Pos _ _ _ _ 27 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 gel gel NOUN NN Number=Sing _ _ _ _ 30 supershift supershift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2691 # text = C5a induced kappaB binding activity was detected 15 min after agonist stimulation, peaked at 30-40 min, and remained detectable at 2 h. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 kappaB kappab NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 15 15 NUM CD NumType=Card _ _ _ _ 10 min min NOUN NNS Number=Plur _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 40 40 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 2 2 NUM CD NumType=Card _ _ _ _ 27 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2692 # text = Binding to kappaB sequence was accompanied by an initial decrease and subsequent increase in the cytoplasmic IkappaBalpha levels, as detected by Western blotting using an anti-IkappaBalpha antibody. 1 Binding bind VERB VBG VerbForm=Ger _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 initial initial ADJ JJ Degree=Pos _ _ _ _ 10 decrease decrease NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 as as SCONJ IN _ _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 Western western ADJ JJ Degree=Pos _ _ _ _ 24 blotting blotting NOUN NN Number=Sing _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 anti-IkappaBalpha anti-IkappaBalpha ADJ JJ Degree=Pos _ _ _ _ 28 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2693 # text = Pertussis toxin treatment markedly decreased kappaB binding activities induced by both C5a and C3a, whereas cholera toxin displayed no inhibitory effect. 1 Pertussis Pertussis DET DT Number=Sing|PronType=Dem _ _ _ _ 2 toxin toxin NOUN NN Number=Sing _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 markedly markedly ADV RB _ _ _ _ _ 5 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 kappaB kappab NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activities activity NOUN NNS Number=Plur _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 cholera cholera NOUN NN Number=Sing _ _ _ _ 19 toxin toxin NOUN NN Number=Sing _ _ _ _ 20 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2694 # text = Neither of the two toxins affected kappaB binding activity induced by TNFalpha in the same cells. 1 Neither neither DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 toxins toxin NOUN NNS Number=Plur _ _ _ _ 6 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2695 # text = These results imply a potential role of the anaphylatoxins C5a and C3a in regulating leukocytes gene expression through G protein-coupled transcription factor activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 anaphylatoxins anaphylatoxins PROPN NNPS Number=Plur _ _ _ _ 10 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 in in NOUN NN Number=Sing _ _ _ _ 16 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 17 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 18 gene gene ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 G G PROPN NNP Number=Sing _ _ _ _ 22 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 23 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2696 # text = Document 003001161 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001161 003001161 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2697 # text = Platelet-activating factor stimulates transcription of the heparin-binding epidermal growth factor-like growth factor in monocytes. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activating activating VERB VBG VerbForm=Ger _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 heparin heparin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 13 growth growth NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2698 # text = Correlation with an increased kappa B binding activity. 1 Correlation correlation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 binding binde VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2699 # text = Human peripheral blood monocytes responded to stimulation of platelet-activating factor (PAF) with up-regulation of the transcript for heparin-binding epidermal growth factor-like growth factor (HB-EGF), a potent mitogen for vascular smooth muscle cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 responded respond VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activating activating VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 up up ADP IN _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcript transcript NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 heparin- heparin- SYM NFP _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 like like ADJ JJ Degree=Pos _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 EGF EGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 potent potent NOUN NN Number=Sing _ _ _ _ 41 mitogen mitogen NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 44 smooth smooth ADJ JJ Degree=Pos _ _ _ _ 45 muscle muscle NOUN NN Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2700 # text = This function of PAF was observed at nanomolar concentrations of the ligand, starting at 30 min after stimulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PAF PAF PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 nanomolar nanomolar ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 starting start VERB VBG VerbForm=Ger _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 30 30 NUM CD NumType=Card _ _ _ _ 17 min min NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2701 # text = The PAF-induced up-regulation of HB-EGF mRNA was accompanied by an increase in kappa B binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PAF Paf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 EGF EGF PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 increase increase NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2702 # text = These functions of PAF appeared to be mediated through the cell surface PAF receptors, as two PAF receptor antagonists, WEB 2086 and L-659,989, blocked both the up-regulation of HB-EGF mRNA and kappa B binding activity induced by PAF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PAF PAF PROPN NNP Number=Sing _ _ _ _ 5 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 surface surface NOUN NN Number=Sing _ _ _ _ 13 PAF Paf NOUN NN Number=Sing _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 PAF Paf NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 WEB Web PROPN NNP Number=Sing _ _ _ _ 23 2086 2086 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 L-659,989 L-659,989 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 both both CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 EGF EGF PROPN NNP Number=Sing _ _ _ _ 37 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 binding binde VERB VBG VerbForm=Ger _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2703 # text = The antagonists, however, had no effect on phorbol ester-induced up-regulation of HB-EGF mRNA and kappa B binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 EGF EGF PROPN NNP Number=Sing _ _ _ _ 21 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2704 # text = Pretreatment of monocytes with pertussis toxin inhibited these functions of PAF, whereas cholera toxin had no inhibitory effect. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 pertussis pertussis DET DT Number=Sing|PronType=Dem _ _ _ _ 6 toxin toxin NOUN NN Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 cholera cholera NOUN NN Number=Sing _ _ _ _ 15 toxin toxin NOUN NN Number=Sing _ _ _ _ 16 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2705 # text = Pyrrolidine dithiocarbamate, an inhibitor for NF-kappa B activation, markedly reduced PAF-stimulated kappa B binding activity as well as up-regulation of HB-EGF mRNA. 1 Pyrrolidine Pyrrolidine NOUN NN Number=Sing _ _ _ _ 2 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 markedly markedly ADV RB _ _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 PAF Paf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 binding binde VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 EGF EGF PROPN NNP Number=Sing _ _ _ _ 32 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2706 # text = These results suggest a potential role of PAF in HB-EGF expression and provide evidence that this stimulation may occur through increased kappa B binding activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PAF PAF PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 EGF EGF PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 evidence evidence NOUN NN Number=Sing _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 occur occur VERB VB VerbForm=Inf _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding binde VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2707 # text = Document 003001162 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001162 003001162 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2708 # text = Expression of the Runt domain-encoding PEBP2 alpha genes in T cells during thymic development. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Runt Runt PROPN NNP Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 8 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 16 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2709 # text = The PEBP2 alpha 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 2710 # text = A and PEBP2 alpha B genes encode the DNA-binding subunit of a murine transcription factor, PEBP2, which is implicated as a T-cell-specific transcriptional regulator. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 murine murine NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2711 # text = These two related genes share the evolutionarily conserved region encoding the Runt domain. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 evolutionarily evolutionarily ADV RB _ _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Runt Runt PROPN NNP Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2712 # text = PEBP2 alpha 1 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 2713 # text = B is the murine counterpart of human AML1, which is located at the breakpoints of the 8;21 and 3;21 chromosome translocations associated with acute myeloid leukemia. 1 B b NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 AML1 Aml1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 breakpoints breakpoint NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 8;21 8;21 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ SpaceAfter=No 22 21 21 NUM CD NumType=Card _ _ _ _ 23 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 24 translocations translocation NOUN NNS Number=Plur _ _ _ _ 25 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 acute acute NOUN NN Number=Sing _ _ _ _ 28 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2714 # text = Northern (RNA) blots of various adult mouse tissues revealed that the levels of expression of both genes were most prominent in the thymus. 1 Northern Northern PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 blots blot NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 various various ADJ JJ Degree=Pos _ _ _ _ 8 adult adult NOUN NN Number=Sing _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2715 # text = Furthermore, transcripts of PEBP2 alpha 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 2716 # text = A and mouse AML1/PEBP2 alpha 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 AML1 Aml1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 2717 # text = B were detected in T lymphocytes in the thymuses from day 16 embryos and newborns, as well as 4-week-old adult mice, by in situ hybridization. 1 B benefit NOUN NN Number=Sing _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 thymuses thymuse NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 day day NOUN NN Number=Sing _ _ _ _ 12 16 16 NUM CD NumType=Card _ _ _ _ 13 embryos embryo NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 newborns newborn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as ADV RB _ _ _ _ _ 18 well well ADV RB Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 week week NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 old old ADJ JJ Degree=Pos _ _ _ _ 25 adult adult NOUN NN Number=Sing _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 situ situ NOUN NN Number=Sing _ _ _ _ 31 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2718 # text = The expression of the genes persisted in peripheral lymph nodes of adult mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 persisted persist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 lymph lymph NOUN NN Number=Sing _ _ _ _ 10 nodes node NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 adult adult NOUN NN Number=Sing _ _ _ _ 13 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2719 # text = The transcripts were detected in all the CD4- CD8-, CD4+ CD8+, CD4+ CD8-, and CD4- CD8+ cell populations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 all all DET PDT _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 CD8-, Cd8-, NOUN NN Number=Sing _ _ _ _ 11 CD4+ Cd4+ NOUN NN Number=Sing _ _ _ _ 12 CD8+ Cd8+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD4+ CD4+ CCONJ CC _ _ _ _ _ 15 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -, -, PUNCT . _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ _ 20 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2720 # text = The results indicated that both genes are expressed in T cells throughout their development, supporting the notion that PEBP2 is a T-cell-specific transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 throughout throughout ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 supporting support VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 notion notion NOUN NN Number=Sing _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2721 # text = Transcripts of mouse AML1/PEBP2 alpha B were also detected in day 12 fetal hematopoietic liver and in the bone marrow cells of newborn mice. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 AML1 AML1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 day day NOUN NN Number=Sing _ _ _ _ 14 12 12 NUM CD NumType=Card _ _ _ _ 15 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 liver liver NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 bone bone NOUN NN Number=Sing _ _ _ _ 22 marrow marrow NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 newborn newborn ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2722 # text = The implication of mouse AML1/PEBP2 alpha B expression in hematopoietic cells other than those of T-cell lineage is discussed in relation to myeloid leukemogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implication implication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mouse mouse NOUN NN Number=Sing _ _ _ _ 5 AML1 AML1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 relation relation NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 myeloid myeloid VERB VB VerbForm=Inf _ _ _ _ 27 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2723 # text = Document 003001163 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001163 003001163 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2724 # text = Regulation of granulocyte-macrophage colony-stimulating factor and E-selectin expression in endothelial cells by cyclosporin A and the T-cell transcription factor NFAT. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 E- E- X GW _ _ _ _ SpaceAfter=No 12 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 19 A a NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2725 # text = Nuclear factor of activated T cells (NFAT) was originally described as a T-cell-specific transcription factor athat supported the activation of cytokine gene expression and mediated the immunoregulatory effects of cyclosporin A (CsA). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 originally originally ADV RB _ _ _ _ _ 12 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 athat athat PRON WDT PronType=Rel _ _ _ _ 22 supported support VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 33 effects effect NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 36 A A PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2726 # text = As we observed that activated endothelial cells also expressed NFAT, we tested the antiinflammatory properties of CsA in endothelial cells. 1 As as SCONJ IN _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that PRON WDT PronType=Dem _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 properties property NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CsA csa PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2727 # text = Significantly, CsA completely suppressed the induction of NFAT in endothelial cells and inhibited the activity of granulocyte-macrophage colony-stimulating factor (GM-CSF) gene regulatory elements that use NFAT by 60%. 1 Significantly significantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CsA csa PROPN NNP Number=Sing _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 gene gene PRON NN Number=Sing _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 NFAT NFAT ADV RB _ _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 60% 60% SYM NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2728 # text = CsA similarly mediated a reduction of up to 65% in GM-CSF mRNA and protein expression in activated endothelial cells. 1 CsA csa PROPN NNP Number=Sing _ _ _ _ 2 similarly similarly ADV RB _ _ _ _ _ 3 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 reduction reduction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 up up NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2729 # text = CsA also suppressed E-selectin, but not vascular cell adhesion molecule-1 (VCAM-1) expression in endothelial cells, even though the E-selectin promoter is activated by NF-kappa B rather than NFAT. 1 CsA csa PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 though though SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 selectin selectin NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 rather rather ADV RB _ _ _ _ _ 39 than than ADP IN _ _ _ _ _ 40 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2730 # text = Hence, induction of cell surface expression of this leukocyte adhesion molecule by tumor necrosis factor (TNF)-alpha was reduced by 40% in the presence of CsA, and this was reflected by a 29% decrease in neutrophil adhesion. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 presence presence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 29 29 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 % % SYM NN Number=Sing _ _ _ _ 41 decrease decrease NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 neutrophil neutrophil ADJ JJ Degree=Pos _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2731 # text = The effects of CsA on endothelial cells were also detected at the chromatin structure level, as DNasel hypersensitive sites within both the GM-CSF enhancer and the E-selectin promoter were suppressed by CsA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CsA csa NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 DNasel DNasel PROPN NNP Number=Sing _ _ _ _ 19 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 selectin selectin NOUN NN Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2732 # text = This represents the first report of NFAT in endothelial cells and suggests mechanisms by which CsA could function as an antiinflammatory agent. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFAT Nfat PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 CsA csa PROPN NNP Number=Sing _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 function function VERB VB VerbForm=Inf _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 22 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2733 # text = Document 003001164 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001164 003001164 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2734 # text = Suppression of a cellular differentiation program by phorbol esters coincides with inhibition of binding of a cell-specific transcription factor (NF-E2) to an enhancer element required for expression of an erythroid-specific gene. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 program program NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 9 esters ester NOUN NNS Number=Plur _ _ _ _ 10 coincides coincide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2735 # text = Induction by hemin increases, while induction with 12-O-tetradecanoylphorbol-13-acetate (TPA) represses, erythroid-specific gene expression in the human cell line K562. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 hemin hemin NOUN NN Number=Sing _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 12-O- 12-o- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 represses represse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ _ 28 K562 k562 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2736 # text = We analyzed the effects of hemin or TPA induction on the binding and activity of transcription factors at a regulatory element found within the transcriptional regulatory sequences of many erythroid-specific genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hemin hemin NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 many many ADJ JJ Degree=Pos _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2737 # text = TPA induction increases the binding of ubiquitous AP-1 factors to this element. 1 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2738 # text = TPA induction inhibits the binding of the lineage limited transcription factor NF-E2 to this transcriptional control element. 1 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lineage lineage NOUN NN Number=Sing _ _ _ _ 9 limited limited ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 E2 e2 NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2739 # text = Hemin induction of K562 cells does not facilitate the binding of NF-E2 to its recognition site. 1 Hemin Hemin ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 K562 K562 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 E2 e2 NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 recognition recognition NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2740 # text = Hemin induction appears to nonspecifically increase the expression of transiently transfected genes in K562 cells. 1 Hemin Hemin ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 nonspecifically nonspecifically ADV RB _ _ _ _ _ 6 increase increase VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transiently transiently ADV RB _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 K562 K562 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2741 # text = Beyond this nonspecific increase in gene expression, hemin induction acts to increase the activity of the lineage limited transcription factor NF-E2. 1 Beyond beyond ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 hemin hemin NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 increase increase VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lineage lineage NOUN NN Number=Sing _ _ _ _ 19 limited limited ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2742 # text = The divergent effects of hemin and TPA on gene expression in K562 cells are mediated, in part, by their contrasting effects on the transcription factor NF-E2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hemin hemin NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TPA TPa NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 K562 K562 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 contrasting contrast NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2743 # text = Document 003001165 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001165 003001165 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2744 # text = Evidence for lowered induction of nuclear factor kappa B in activated human T lymphocytes during aging. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 lowered lowered VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2745 # text = Transcription factor NF kappa B (nuclear factor kappa B) is induced in T lymphocytes from young individuals following activation with a variety of stimuli including anti-CD3, phorbol myristate acetate (PMA), and tumor necrosis factor-alpha (TNF-alpha). 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 young young ADJ JJ Degree=Pos _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 variety variety NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 27 including include VERB VBG VerbForm=Ger _ _ _ _ 28 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 myristate myristate NOUN NN Number=Sing _ _ _ _ 32 acetate acetate NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 tumor tumor NOUN NN Number=Sing _ _ _ _ 39 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 alpha alpha NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2746 # text = In contrast, activated T lymphocytes from older individuals show a significant reduction in the induction of NF kappa B in response to the same stimuli. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 older older ADJ JJR Degree=Cmp _ _ _ _ 9 individuals individual NOUN NNS Number=Plur _ _ _ _ 10 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 significant significant ADJ JJ Degree=Pos _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 same same ADJ JJ Degree=Pos _ _ _ _ 26 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2747 # text = The age-related decline in induction of NF kappa B could not be attributed to alteration in the composition of subunits, p50 and p65 were found to be the predominant subunits of induced NF kappa B in T cells from young as well as elderly donors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 related related ADJ JJ Degree=Pos _ _ _ _ 5 decline decline NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 alteration alteration NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 composition composition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 p50 p50 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p65 p65 NUM CD NumType=Card _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 33 subunits subunit NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B B PROPN NNP Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 T T PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 young young ADJ JJ Degree=Pos _ _ _ _ 44 as as ADV RB _ _ _ _ _ 45 well well ADV RB Degree=Pos _ _ _ _ 46 as as ADP IN _ _ _ _ _ 47 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 48 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2748 # text = Furthermore, similar levels of NF kappa B were found in the cytosols of unactivated T cells from both young and elderly donors suggesting that precursor levels of NF kappa B remain unaltered during aging. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 similar similar ADJ JJ Degree=Pos _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytosols cytosol NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 young young ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 23 donors donor NOUN NNS Number=Plur _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 unaltered unaltered ADJ JJ Degree=Pos _ _ _ _ 34 during during ADP IN _ _ _ _ _ 35 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2749 # text = These results suggest that an age-associated decline in the induction of NF kappa B in activated T cells from elderly individuals may be attributable to altered regulation of the inhibitor, I kappa B, and may play an important role in immune dysregulation accompanying aging. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 decline decline NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 23 individuals individual NOUN NNS Number=Plur _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 play play VERB VB VerbForm=Inf _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 immune immune ADJ JJ Degree=Pos _ _ _ _ 46 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 47 accompanying accompany VERB VBG VerbForm=Ger _ _ _ _ 48 aging ag VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2750 # text = Document 003001166 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001166 003001166 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2751 # text = Expression of Ah receptor (TCDD receptor) during human monocytic differentiation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Ah ah PROPN NNP Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TCDD tCDd NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2752 # text = We have previously found a high expression of human 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2753 # text = Ah receptor (TCDD receptor) mRNA in peripheral blood cells of individuals. 1 Ah ah ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TCDD tCDd NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2754 # text = In this paper, the expression of this gene in blood cells was first investigated in fractions of nucleated cells, revealing predominant expression of the Ah receptor gene in the monocyte fraction. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 first first ADV RB _ _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 fractions fraction NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 nucleated nucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 23 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 Ah ah PROPN NNP Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 33 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2755 # text = Then the expression levels of AhR mRNA in various hematopoietic cell lines were examined together with those of Arnt and P450IA1. 1 Then then ADV RB PronType=Dem _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AhR AhR PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 together together ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Arnt Arnt PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 P450IA1 P450ia1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2756 # text = AhR was expressed at high levels in monocytoid U937, THP1, and HEL/S cells, and at moderate levels in promyelocytic HL60 cells and erythroblastic HEL cells. 1 AhR Ahr PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 9 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 THP1 THP1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 HEL/ HEL/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 15 S s ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 24 HL60 HL60 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 erythroblastic erythroblastic ADJ JJ Degree=Pos _ _ _ _ 28 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2757 # text = However, it was not detected in lymphoid cells MOLT4 (T cell) and BALL1 (B cell), nor in K562 erythroblasts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 MOLT4 Molt4 NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 T t NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 BALL1 Ball1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 B b NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 K562 K562 NUM CD NumType=Card _ _ _ _ 25 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2758 # text = Furthermore, a specific induction of AhR during monocytic differentiation was investigated in HL60 and HEL cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AhR AhR PROPN NNP Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 HL60 HL60 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2759 # text = HL60 cells were induced to differentiate toward monocytes-macrophages by incubation with phorbol ester, showing a 5- to 2-fold increase of AhR mRNA. 1 HL60 HL60 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 7 toward toward ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 incubation incubation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 showing show VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AhR AhR PROPN NNP Number=Sing _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2760 # text = The incubation with transforming growth factor beta 1 and 1 alpha,25-dihydroxyvitamin D3 resulted in a 5- to 7-fold increase of AhR mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 incubation incubation NOUN NN Number=Sing _ _ _ _ 3 with with SCONJ IN _ _ _ _ _ 4 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -dihydroxyvitamin -dihydroxyvitamin ADJ JJ Degree=Pos _ _ _ _ 13 D3 D3 NOUN NN Number=Sing _ _ _ _ 14 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fold fold NOUN NN Number=Sing _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 AhR AhR PROPN NNP Number=Sing _ _ _ _ 26 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2761 # text = The HEL cells also exhibited a similar elevation of AhR mRNA level, when they had differentiated toward monocyte-macrophage cells by these combined inducers, but little change in the mRNA level was observed when the cells were induced to differentiate into other cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 elevation elevation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 AhR AhR PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 16 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 toward toward ADP IN _ _ _ _ _ 19 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 20 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 little little ADJ JJ Degree=Pos _ _ _ _ 29 change change NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 when when ADV WRB PronType=Int _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 43 into into ADP IN _ _ _ _ _ 44 other other ADJ JJ Degree=Pos _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2762 # text = Treatment of the differentiated HL60 cells with 3-methylcholanthrene, a ligand of AhR, induced the expression of the P450IA1 gene. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HL60 HL60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 methylcholanthrene methylcholanthrene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 AhR AhR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 P450IA1 P450ia1 PROPN NNP Number=Sing _ _ _ _ 23 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2763 # text = These results indicated that expression of 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ # sent_id = 2764 # text = AhR mRNA was significantly induced during monocytic differentiation and that the differentiated cells were responsive to xenobiotics. 1 AhR AhR PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 differentiated differentiated ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 xenobiotics xenobiotic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2765 # text = Our results suggest that AhR may play an important role in the function of monocytes and also in the eventual activation of environmental carcinogens. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AhR AhR PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 play play VERB VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 environmental environmental ADJ JJ Degree=Pos _ _ _ _ 24 carcinogens carcinogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2766 # text = Document 003001167 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001167 003001167 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2767 # text = Genes encoding general initiation factors for RNA polymerase II transcription are dispersed in the human genome. 1 Genes gene NOUN NNS Number=Plur _ _ _ _ 2 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 3 general general ADJ JJ Degree=Pos _ _ _ _ 4 initiation initiation NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 RNA RNA PROPN NNP Number=Sing _ _ _ _ 8 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 dispersed disperse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2768 # text = General transcription factors are required for accurate initiation of transcription by RNA polymerase II. 1 General General ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 accurate accurate ADJ JJ Degree=Pos _ _ _ _ 8 initiation initiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 RNA RNA PROPN NNP Number=Sing _ _ _ _ 13 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2769 # text = Human cDNAs encoding subunits of these factors have been cloned and sequenced. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 subunits subunit NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 sequenced sequence VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2770 # text = Using fluorescence in situ hybridization (FISH), we show here that the genes encoding the TATA-box binding protein (TBP), TFIIB, TFIIE alpha, TFIIE beta, RAP30, RAP74 and the 62 kDa subunit, of TFIIH are located at the human chromosomal bands 6q26-27, 1p21-22, 3q21-24, 8p12, 13q14, 19p13.3 and 11p14-15.1, respectively. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 situ situ NOUN NN Number=Sing _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 FISH Fish PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 here here ADV RB PronType=Dem _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 box box NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TBP TBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 TFIIB TFIIB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 TFIIE TFIIE PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 TFIIE TFIIE PROPN NNP Number=Sing _ _ _ _ 33 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 RAP30 RAP30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 RAP74 RAP74 PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 62 62 NUM CD NumType=Card _ _ _ _ 41 kDa kDa PROPN NNP Number=Sing _ _ _ _ 42 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 TFIIH TFIIh DET DT _ _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 at at ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 human human ADJ JJ Degree=Pos _ _ _ _ 51 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 52 bands band NOUN NNS Number=Plur _ _ _ _ 53 6q26 6q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 -27 -27 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 1p21-22 1p21-22 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 3q21-24 3q21-24 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 8p12 8p12 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 13q14 13q14 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 19p13.3 19p13.3 NUM CD NumType=Card _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 11p14 11p14 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 - - SYM SYM _ _ _ _ SpaceAfter=No 68 15.1 15.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 2771 # text = This dispersed localization of a group of functionally related gene provides insights into the molecular mechanism of human genome evolution and their possible involvement in human diseases. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 dispersed dispersed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 group group NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 functionally functionally ADV RB _ _ _ _ _ 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 insights insight NOUN NNS Number=Plur _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 genome genome NOUN NN Number=Sing _ _ _ _ 20 evolution evolution NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 possible possible ADJ JJ Degree=Pos _ _ _ _ 24 involvement involvement NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2772 # text = Document 003001168 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001168 003001168 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2773 # text = Interferon-gamma and the sexual dimorphism of autoimmunity. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 sexual sexual ADJ JJ Degree=Pos _ _ _ _ 7 dimorphism dimorphism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2774 # text = The sexual difference in the incidence of autoimmune diseases has remained an enigma for many years. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sexual sexual ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 incidence incidence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 9 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 remained remain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 enigma enigma NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 many many ADJ JJ Degree=Pos _ _ _ _ 16 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2775 # text = In the examination of the induction of autoimmunity in transgenic mice, evidence has been obtained further implicating the lymphokine interferon-gamma in the etiology of autoimmunity. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 examination examination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 evidence evidence NOUN NN Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 further further SCONJ IN _ _ _ _ _ 18 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 21 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 etiology etiology NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2776 # text = Sex steroid regulation of the production of this molecule, as well as other cytokines, may help explain the gender-specific differences in the immune system, including autoimmunity. 1 Sex sex NOUN NN Number=Sing _ _ _ _ 2 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 help help VERB VB VerbForm=Inf _ _ _ _ 19 explain explain VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 gender gender NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 differences difference NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immune immune ADJ JJ Degree=Pos _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2777 # text = Document 003001169 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001169 003001169 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2778 # text = Alternative splicing of RNA transcripts encoded by the murine p105 NF-kappa B gene generates I kappa B gamma isoforms with different inhibitory activities. 1 Alternative alternative ADJ JJ Degree=Pos _ _ _ _ 2 splicing splicing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RNA RNA PROPN NNP Number=Sing _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 murine murine NOUN NN Number=Sing _ _ _ _ 10 p105 p105 NOUN NN Number=Sing _ _ _ _ 11 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 gene gene PROPN NNP Number=Sing _ _ _ _ 16 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa X FW Foreign=Yes _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2779 # text = The gene encoding the 105-kDa protein (p105) precursor of the p50 subunit of transcription factor NF-kappa B also encodes a p70 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 p70 p70 NOUN NN Number=Sing _ _ _ _ # sent_id = 2780 # text = I kappa B protein, I kappa B gamma, which is identical to the C-terminal 607 amino acids of p105. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 identical identical ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 607 607 NUM CD NumType=Card _ _ _ _ 19 amino amino DET DT _ _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2781 # text = Here we show that alternative RNA splicing generates I kappa B gamma isoforms with properties different from those of p70. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 6 RNA RNA NOUN NN Number=Sing _ _ _ _ 7 splicing splicing NOUN NN Number=Sing _ _ _ _ 8 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa X FW Foreign=Yes _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 properties property NOUN NNS Number=Plur _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2782 # text = One 63-kDa isoform, termed I kappa B gamma-1, which lacks 59 amino acids C-terminal to ankyrin repeat 7, has a novel 35-amino acid C terminus encoded by an alternative reading frame of the p105 gene. 1 One one NUM CD NumType=Card _ _ _ _ 2 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 59 59 NUM CD NumType=Card _ _ _ _ 18 amino amino NOUN NN Number=Sing _ _ _ _ 19 acids acid NOUN NNS Number=Plur _ _ _ _ 20 C- C- PUNCT : _ _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 ankyrin ankyrin ADV RB _ _ _ _ _ 24 repeat repeat VERB VB VerbForm=Inf _ _ _ _ 25 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 novel novel NOUN NN Number=Sing _ _ _ _ 30 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 amino amino DET DT _ _ _ _ _ 33 acid acid ADJ JJ Degree=Pos _ _ _ _ 34 C c NOUN NN Number=Sing _ _ _ _ 35 terminus terminus NOUN NN Number=Sing _ _ _ _ 36 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 40 reading reading NOUN NN Number=Sing _ _ _ _ 41 frame frame NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 p105 p105 NOUN NN Number=Sing _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2783 # text = A 55-kDa isoform, I kappa B gamma-2, lacks the 190 C-terminal amino acids of p70I kappa B gamma. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 55 55 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 190 190 NUM CD NumType=Card _ _ _ _ 17 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 amino amino DET DT _ _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2784 # text = In contrast to p70I kappa 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2785 # text = B gamma, which is a cytoplasmic protein, I kappa B gamma-1 is found in both the cytoplasm and nucleus, whereas I kappa B gamma-2 is predominantly nuclear. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B B ADJ JJ Degree=Pos _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 nucleus nucleus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa X FW Foreign=Yes _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 predominantly predominantly ADV RB _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2786 # text = The I kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2787 # text = B gamma isoforms also display differences in specificity and affinity for Rel/NF-kappa B proteins. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 specificity specificity NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2788 # text = While p70I kappa 1 While while SCONJ IN _ _ _ _ _ 2 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2789 # text = B gamma inhibits p50-, p65-, and c-Rel-mediated transactivation and/or DNA binding, both I kappa B gamma-1 and I kappa B gamma-2 are specific for p50 and have different affinities for this subunit. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -, -, PUNCT . _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel-mediated Rel-mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 p50 p50 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 different different ADJ JJ Degree=Pos _ _ _ _ 41 affinities affinity NOUN NNS Number=Plur _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2790 # text = The absence in I kappa B gamma-1 and I kappa B gamma-2 of a protein kinase A site whose phosphorylation modulates p70I kappa B gamma inhibitory activity suggests that alternative RNA splicing may be used to generate I kappa B gamma isoforms that respond differently to intracellular signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 modulates modulate NOUN NNS Number=Plur _ _ _ _ 26 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 kappa kappa X FW Foreign=Yes _ _ _ _ 29 B b X GW _ _ _ _ _ 30 gamma gamma X FW Foreign=Yes _ _ _ _ 31 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 36 RNA RNa NOUN NN Number=Sing _ _ _ _ 37 splicing splicing NOUN NN Number=Sing _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 be be AUX VB VerbForm=Inf _ _ _ _ 40 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 generate generate VERB VB VerbForm=Inf _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa X FW Foreign=Yes _ _ _ _ 45 B b ADJ JJ Degree=Pos _ _ _ _ 46 gamma gamma NOUN NN Number=Sing _ _ _ _ 47 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 differently differently ADV RB _ _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 53 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2791 # text = Document 003001170 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001170 003001170 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2792 # text = Structure and function analysis of the human myeloid cell nuclear differentiation antigen promoter: evidence for the role of Sp1 and not of c-Myb or PU.1 in myelomonocytic lineage-specific expression. 1 Structure structure NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 antigen antigen NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 evidence evidence NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Myb Myb NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 31 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2793 # text = The human myeloid nuclear differentiation antigen (MNDA) is expressed specifically in maturing cells of the myelomonocytic lineage and in monocytes and granulocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MNDA MNDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 maturing mature VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2794 # text = Epitope enhancement was used to confirm the strict lineage- and stage-specific expression of MNDA in bone marrow as well as in other paraffin-embedded fixed tissues. 1 Epitope Epitope ADJ JJ Degree=Pos _ _ _ _ 2 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 strict strict ADJ JJ Degree=Pos _ _ _ _ 9 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MNDA MNDA PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 bone bone NOUN NN Number=Sing _ _ _ _ 20 marrow marrow NOUN NN Number=Sing _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 paraffin- paraffin- PUNCT , _ _ _ _ SpaceAfter=No 27 embedded embedd VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2795 # text = A 1-kb region of the gene that includes 5' flanking sequence was reported earlier to contain functional promoter activity and was specifically demethylated in expressing cells in contrast to null cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ' ' PUNCT `` _ _ _ _ _ 13 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 contain contain VERB VB VerbForm=Inf _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 specifically specifically ADV RB _ _ _ _ _ 26 demethylated demethylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 contrast contrast NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 null null ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2796 # text = Further analysis has revealed that this 1-kb fragment promotes higher reporter gene activity in MNDA-expressing cells than non-expressing cells, indicating cell-specific differences in transactivation. 1 Further further ADV RB _ _ _ _ _ 2 analysis analysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kb kb NOUN NN Number=Sing _ _ _ _ 10 fragment fragment NOUN NN Number=Sing _ _ _ _ 11 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 higher higher ADJ JJR Degree=Cmp _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 MNDA MNDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 non-expressing non-expresse ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 differences difference NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2797 # text = This sequence contains consensus elements consistent with myeloid-specific gene expression, including a PU.1 consensus site near the major transcription start site and a cluster of c-Myb sites located several hundred bases upstream of this region. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consensus consensus ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 17 consensus consensus NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 near near ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 major major ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 start start NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 cluster cluster NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 Myb Myb NOUN NN Number=Sing _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 hundred hundred NUM CD NumType=Card _ _ _ _ 36 bases base NOUN NNS Number=Plur _ _ _ _ 37 upstream upstream NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2798 # text = However, analysis of deletion mutants localized nearly all of the promoter activity to a short region (-73 to -16) that did not include the cluster of c-Myb sites. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 deletion deletion NOUN NN Number=Sing _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 nearly nearly ADV RB _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 short short ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 73 73 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 include include VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cluster cluster NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Myb Myb NOUN NN Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2799 # text = A 4-bp mutation of the core Sp1 consensus element (GC box) (-20) reduced overall promoter activity of the 1-kb fragment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GC Gc NOUN NN Number=Sing _ _ _ _ 14 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 (- (- PUNCT . _ _ _ _ SpaceAfter=No 17 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 overall overall ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kb kb NOUN NN Number=Sing _ _ _ _ 28 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2800 # text = Mutation of the PU.1 site did not significantly affect promoter activity. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 affect affect VERB VB VerbForm=Inf _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2801 # text = Only a small region (-35 to +22) including the Sp1 element and transcription start site, but not the PU.1 site was footprinted. 1 Only only ADV RB _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 small small ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 -35 -35 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 + + SYM SYM _ _ _ _ SpaceAfter=No 9 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 footprinted footprint VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2802 # text = The 4-bp mutation of the core Sp1 consensus element abolished footprinting at the site and an antibody super-shift reaction showed that Sp1 is one of the factors binding the consensus site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 20 super super ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 shift shift ADJ JJ Degree=Pos _ _ _ _ 23 reaction reaction NOUN NN Number=Sing _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 one one NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 consensus consensus NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2803 # text = The Sp1 site also co-localizes with a DNase I hypersensitive site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 co-localizes co-localize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 DNase DNase NOUN NN Number=Sing _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2804 # text = The results indicate that DNA methylation, chromatin structure, and transactivation at an Sp1 site contribute to the highly restricted expression of this myelomonocytic lineage specific gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 methylation methylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 9 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 contribute contribute NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 highly highly ADV RB _ _ _ _ _ 21 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 26 lineage lineage NOUN NN Number=Sing _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2805 # text = Document 003001171 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001171 003001171 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2806 # text = The promoter of the CD19 gene is a target for the B-cell-specific transcription factor BSAP. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 19 19 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 target target NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2807 # text = The CD19 protein is expressed on the surface of all B-lymphoid cells with the exception of terminally differentiated plasma cells and has been implicated as a signal-transducing receptor in the control of proliferation and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 19 19 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 exception exception NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 terminally terminally ADV RB _ _ _ _ _ 21 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 transducing transducing VERB VBG VerbForm=Ger _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 control control NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2808 # text = Here we demonstrate complete correlation between the expression pattern of the CD19 gene and the B-cell-specific transcription factor BSAP in a large panel of B-lymphoid cell lines. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 complete complete ADJ JJ Degree=Pos _ _ _ _ 5 correlation correlation NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 pattern pattern NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 19 19 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 large large ADJ JJ Degree=Pos _ _ _ _ 27 panel panel NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2809 # text = The human CD19 gene has been cloned, and several BSAP-binding sites have been mapped by in vitro protein-DNA binding studies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 19 19 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2810 # text = In particular, a high-affinity BSAP-binding site instead of a TATA sequence is located in the -30 promoter region upstream of a cluster of heterogeneous transcription start sites. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 affinity affinity NOUN NN Number=Sing _ _ _ _ 8 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 instead instead ADV RB _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 TATA TATA NOUN NN Number=Sing _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 30 30 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 upstream upstream NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 cluster cluster NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 start start NOUN NN Number=Sing _ _ _ _ 33 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2811 # text = Moreover, this site is occupied by BSAP in vivo in a CD19-expressing B-cell line but not in plasma or HeLa cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 CD19 CD19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -expressing -expressing NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 HeLa Hela NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2812 # text = This high-affinity site has been conserved in the promoters of both human and mouse CD19 genes and was furthermore shown to confer B-cell specificity to a beta-globin reporter gene in transient transfection experiments. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 affinity affinity NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 human human NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 mouse mouse NOUN NN Number=Sing _ _ _ _ 17 CD C NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 19 19 NUM CD NumType=Card _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 furthermore furthermore ADV RB _ _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 confer confer VERB VB VerbForm=Inf _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 specificity specificity NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 globin globin ADJ JJ Degree=Pos _ _ _ _ 35 reporter reporter NOUN NN Number=Sing _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 transient transient ADJ JJ Degree=Pos _ _ _ _ 39 transfection transfection NOUN NN Number=Sing _ _ _ _ 40 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2813 # text = In addition, BSAP was found to be the only abundant DNA-binding activity of B-cell nuclear extracts that interacts with the CD19 promoter. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 only only ADJ JJ Degree=Pos _ _ _ _ 11 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 19 19 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2814 # text = Together, this evidence strongly implicates BSAP in the regulation of the CD19 gene. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 strongly strongly ADV RB _ _ _ _ _ 6 implicates implicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 19 19 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2815 # text = Document 003001172 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001172 003001172 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2816 # text = Simple derivation of TFIID-dependent RNA polymerase II transcription systems from Schizosaccharomyces pombe and other organisms, and factors required for transcriptional activation. 1 Simple simple ADJ JJ Degree=Pos _ _ _ _ 2 derivation derivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TFIID TFIID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 RNA RNa PROPN NNP Number=Sing _ _ _ _ 8 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 Schizosaccharomyces Schizosaccharomyce NOUN NNS Number=Plur _ _ _ _ 14 pombe pombe NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 organisms organism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2817 # text = Resolution of whole cell extract through two chromatographic steps yields a single protein fraction requiring only the addition of TFIID for the initiation of transcription at RNA polymerase II promoters. 1 Resolution resolution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 whole whole ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 extract extract NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 chromatographic chromatographic ADJ JJ Degree=Pos _ _ _ _ 9 steps step NOUN NNS Number=Plur _ _ _ _ 10 yields yield VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 single single ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 fraction fraction NOUN NN Number=Sing _ _ _ _ 15 requiring require VERB VBG VerbForm=Ger _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 addition addition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 TFIID tFIId PROPN NNP Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 initiation initiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 RNA RNA PROPN NNP Number=Sing _ _ _ _ 28 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2818 # text = This approach allows the convenient generation of RNA polymerase II transcription systems from Saccharomyces cerevisiae, human lymphocytes, and Schizosaccharomyces pombe. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 approach approach NOUN NN Number=Sing _ _ _ _ 3 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 convenient convenient ADJ JJ Degree=Pos _ _ _ _ 6 generation generation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RNA RNA PROPN NNP Number=Sing _ _ _ _ 9 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 systems system NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 Saccharomyces Saccharomyce NOUN NNS Number=Plur _ _ _ _ 15 cerevisiae cerevisia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Schizosaccharomyces Schizosaccharomyce NOUN NNS Number=Plur _ _ _ _ 22 pombe pombe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2819 # text = TFIIDs from all three organisms are interchangeable among all three systems. 1 TFIIDs TFIid NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 organisms organism NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 interchangeable interchangeable ADJ JJ Degree=Pos _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2820 # text = The S. cerevisiae and Sch. pombe systems support effects of acidic activator proteins, provided a further protein fraction from S. cerevisiae is supplied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 S. S. PROPN NNP Number=Sing _ _ _ _ 3 cerevisiae cerevisia PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Sch Sch PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ 7 pombe pombe ADJ JJ Degree=Pos _ _ _ _ 8 systems system NOUN NNS Number=Plur _ _ _ _ 9 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 provided provide VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 further further ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 fraction fraction NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 S. S. PROPN NNP Number=Sing _ _ _ _ 23 cerevisiae cerevisiae NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 supplied supply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2821 # text = This further fraction is distinct from the mediator of transcriptional activation described previously and represents a second component in addition to general initiation factors that may facilitate a response to acidic activators. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 fraction fraction NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mediator mediator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 described describe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 general general ADJ JJ Degree=Pos _ _ _ _ 23 initiation initiation NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 32 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2822 # text = Document 003001173 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001173 003001173 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2823 # text = I kappa B/MAD-3 masks the nuclear localization signal of NF-kappa B p65 and requires the transactivation domain to inhibit NF-kappa B p65 DNA binding. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 masks mask NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 p65 p65 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 p65 p65 NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2824 # text = The active nuclear form of the NF-kappa B transcription factor complex is composed of two DNA binding subunits, NF-kappa B p65 and NF-kappa B p50, both of which share extensive N-terminal sequence homology with the v-rel oncogene product. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 form form NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 p65 p65 NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 both both CCONJ CC _ _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 which which DET WDT PronType=Int _ _ _ _ 37 share share NOUN NN Number=Sing _ _ _ _ 38 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 39 N- N- PUNCT , _ _ _ _ SpaceAfter=No 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 sequence sequence NOUN NN Number=Sing _ _ _ _ 42 homology homology NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 v- v- SYM NFP _ _ _ _ SpaceAfter=No 46 rel rel ADJ JJ Degree=Pos _ _ _ _ 47 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 48 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2825 # text = The NF-kappa B p65 subunit provides the transactivation activity in this complex and serves as an intracellular receptor for a cytoplasmic inhibitor of NF-kappa B, termed I kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 p65 p65 NUM CD NumType=Card _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 24 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2826 # text = In contrast, NF-kappa B p50 alone fails to stimulate kappa B-directed transcription, and based on prior in vitro studies, is not directly regulated by I kappa B. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 p50 p50 NUM CD NumType=Card _ _ _ _ 9 alone alone ADJ JJ Degree=Pos _ _ _ _ 10 fails fail NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 prior prior ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 directly directly ADV RB _ _ _ _ _ 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2827 # text = To investigate the molecular basis for the critical regulatory interaction between NF-kappa B and I kappa B/MAD-3, a series of human NF-kappa B p65 mutants was identified that functionally segregated DNA binding, I kappa B-mediated inhibition, and I kappa B-induced nuclear exclusion of this transcription factor. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 series series NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ _ 34 mutants mutant NOUN NNS Number=Plur _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 functionally functionally ADV RB _ _ _ _ _ 39 segregated segregate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ _ 41 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B- B- SYM NFP _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 51 kappa kappa PROPN NNP Number=Sing _ _ _ _ 52 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 56 exclusion exclusion NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 59 transcription transcription NOUN NN Number=Sing _ _ _ _ 60 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 2828 # text = Results from in vivo expression studies performed with these NF-kappa B p65 mutants revealed the following: 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vivo vivo NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 p65 p65 NUM CD NumType=Card _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 following follow VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ # sent_id = 2829 # text = 1) I kappa B/MAD-3 completely inhibits NF-kappa B p65-dependent transcriptional activation mediated through the human immunodeficiency virus type 1 kappa 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 /MAD /MAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 completely completely ADV RB _ _ _ _ _ 10 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2830 # text = B enhancer in human T lymphocytes, 2) the binding of I kappa B/MAD-3 to NF-kappa B p65 is sufficient to retarget NF-kappa B p65 from the nucleus to the cytoplasm, 3) selective deletion of the functional nuclear localization signal present in the Rel homology domain of NF-kappa B p65 disrupts its ability to engage I kappa B/MAD-3, and 4) the unique C-terminus of NF-kappa B p65 attenuates its own nuclear localization and contains sequences that are required for I kappa B-mediated inhibition of NF-kappa B p65 DNA binding activity. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 2 2 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 /MAD /MAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 p65 p65 NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 retarget retarget VERB VB VerbForm=Inf _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 p65 p65 NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 3 3 X LS _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 selective selective ADJ JJ Degree=Pos _ _ _ _ 44 deletion deletion NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 functional functional ADJ JJ Degree=Pos _ _ _ _ 48 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 49 localization localization NOUN NN Number=Sing _ _ _ _ 50 signal signal NOUN NN Number=Sing _ _ _ _ 51 present present ADJ JJ Degree=Pos _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 Rel Rel PROPN NNP Number=Sing _ _ _ _ 55 homology homology NOUN NN Number=Sing _ _ _ _ 56 domain domain NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 kappa kappa NOUN NN Number=Sing _ _ _ _ 61 B b NOUN NN Number=Sing _ _ _ _ 62 p65 p65 NOUN NN Number=Sing _ _ _ _ 63 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 64 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 65 ability ability NOUN NN Number=Sing _ _ _ _ 66 to to PART TO _ _ _ _ _ 67 engage engage VERB VB VerbForm=Inf _ _ _ _ 68 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 69 kappa kappa PROPN NNP Number=Sing _ _ _ _ 70 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 / / PUNCT , _ _ _ _ SpaceAfter=No 72 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 4 4 X LS _ _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ _ 78 the the DET DT Definite=Def|PronType=Art _ _ _ _ 79 unique unique ADJ JJ Degree=Pos _ _ _ _ 80 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 82 terminus terminus NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 85 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 86 kappa kappa NOUN NN Number=Sing _ _ _ _ 87 B b NOUN NN Number=Sing _ _ _ _ 88 p65 p65 NOUN NN Number=Sing _ _ _ _ 89 attenuates attenuate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 90 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 91 own own ADJ JJ Degree=Pos _ _ _ _ 92 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 93 localization localization NOUN NN Number=Sing _ _ _ _ 94 and and CCONJ CC _ _ _ _ _ 95 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 96 sequences sequence NOUN NNS Number=Plur _ _ _ _ 97 that that PRON WDT PronType=Rel _ _ _ _ 98 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 99 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 100 for for SCONJ IN _ _ _ _ _ 101 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 102 kappa kappa ADV RB _ _ _ _ _ 103 B- B- PUNCT : _ _ _ _ SpaceAfter=No 104 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 105 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 106 of of ADP IN _ _ _ _ _ 107 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 108 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 109 kappa kappa NOUN NN Number=Sing _ _ _ _ 110 B b NOUN NN Number=Sing _ _ _ _ 111 p65 p65 NOUN NN Number=Sing _ _ _ _ 112 DNA dna NOUN NN Number=Sing _ _ _ _ 113 binding binding VERB VBG VerbForm=Ger _ _ _ _ 114 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 115 . . PUNCT . _ _ _ _ _ # sent_id = 2831 # text = Together, these findings suggest that the nuclear localization signal and transactivation domain of NF-kappa B p65 constitute a bipartite system that is critically involved in the inhibitory function of I kappa B/MAD-3. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 localization localization NOUN NN Number=Sing _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 constitute constitute NOUN NN Number=Sing _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 bipartite bipartite ADJ JJ Degree=Pos _ _ _ _ 23 system system NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 critically critically ADV RB _ _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 31 function function NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2832 # text = Unexpectedly, our in vivo studies also demonstrate that I kappa B/MAD-3 binds directly to NF-kappa B p50. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 /MAD /mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 binds bind NOUN NNS Number=Plur _ _ _ _ 17 directly directly ADV RB _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2833 # text = This interaction is functional as it leads to retargeting of NF-kappa B p50 from the nucleus to the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to SCONJ IN _ _ _ _ _ 9 retargeting retarget VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2834 # text = However, no loss of DNA binding activity is observed, presumably reflecting the unique C-terminal domain that is distinct from that present in NF-kappa B p65. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 presumably presumably ADV RB _ _ _ _ _ 13 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 unique unique ADJ JJ Degree=Pos _ _ _ _ 16 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 domain domain NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 present present NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2835 # text = Document 003001174 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001174 003001174 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2836 # text = Evaluation of the role of ligand and thermal activation of specific DNA binding by in vitro synthesized human glucocorticoid receptor. 1 Evaluation evaluation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 ligand ligand NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 thermal thermal ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro PROPN NNP Number=Sing _ _ _ _ 17 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2837 # text = We have used a DNA-binding/immunoprecipitation assay to analyze the capacity of human glucocorticoid receptor (hGR), generated in rabbit reticulocyte lysates, to bind DNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 DNA- Dna- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 9 assay assay NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 hGR hgr NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 25 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 26 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 bind bind VERB VB VerbForm=Inf _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2838 # text = In vitro translated hGR was indistinguishable from native hGR, as determined by migration on sodium dodecyl sulfate-polyacrylamide gels, sedimentation on sucrose density gradients, and reactivity with antipeptide antibodies generated against hGR. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 hGR hgr NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 native native ADJ JJ Degree=Pos _ _ _ _ 9 hGR hgr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 migration migration NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 sodium sodium NOUN NN Number=Sing _ _ _ _ 17 dodecyl dodecyl NOUN NN Number=Sing _ _ _ _ 18 sulfate sulfate NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 21 gels gel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 sedimentation sedimentation NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 sucrose sucrose DET DT Number=Plur|PronType=Dem _ _ _ _ 26 density density NOUN NN Number=Sing _ _ _ _ 27 gradients gradient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 antipeptide antipeptide ADJ JJ Degree=Pos _ _ _ _ 33 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 34 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 against against ADP IN _ _ _ _ _ 36 hGR hGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2839 # text = In addition, cell-free synthesized hGR was capable of specific binding to glucocorticoid response element (GRE)-containing DNA fragments. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 synthesized synthesized ADJ JJ Degree=Pos _ _ _ _ 8 hGR hgr NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 capable capable ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2840 # text = Using this assay system, we have evaluated the contributions of ligand binding and heat activation to DNA binding by these glucocorticoid receptors. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 contributions contribution NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 heat heat NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 DNA Dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2841 # text = In vitro translated hGR was capable of selective DNA binding even in the absence of glucocorticoid. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 hGR hgr NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 even even ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2842 # text = Treatment with dexamethasone or the antiglucocorticoid RU486 had no additional effect on the DNA-binding capacity when receptor preparations were maintained at 0 C (no activation). 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 RU486 Ru486 PROPN NNP Number=Sing _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 additional additional ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 capacity capacity NOUN NN Number=Sing _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 receptor receptor ADJ JJ Degree=Pos _ _ _ _ 20 preparations preparation NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 0 0 NUM CD NumType=Card _ _ _ _ 25 C C NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 no no DET DT _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2843 # text = In contrast, addition of either ligand or antagonist in combination with a heat activation step promoted DNA binding by approximately 3-fold over that of heat-activated unliganded receptors. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 addition addition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 combination combination NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 step step NOUN NN Number=Sing _ _ _ _ 17 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 DNA Dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 approximately approximately ADV RB _ _ _ _ _ 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 over over ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 unliganded unliganded ADJ JJ Degree=Pos _ _ _ _ 32 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2844 # text = Agonist (dexamethasone) was slightly more effective in supporting specific DNA binding than antagonist (RU486). 1 Agonist Agonist ADJ JJS Degree=Sup _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 slightly slightly ADV RB _ _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 effective effective ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 supporting support VERB VBG VerbForm=Ger _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RU486 RU486 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2845 # text = DNA binding by in vitro synthesized GR was blocked by the addition of sodium molybdate to the receptor preparations before steroid addition and thermal activation. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro PROPN NNP Number=Sing _ _ _ _ 6 synthesized synthesized VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 GR Gr PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 addition addition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 sodium sodium NOUN NN Number=Sing _ _ _ _ 15 molybdate molybdate NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 preparations preparation NOUN NNS Number=Plur _ _ _ _ 20 before before ADP IN _ _ _ _ _ 21 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 22 addition addition NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 thermal thermal ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2846 # text = Addition of KCl resulted in less DNA binding either due to blockage of DNA-receptor complex formation or disruption of the complexes. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 KCl KCl PROPN NNP Number=Sing _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 less less ADJ JJR Degree=Cmp _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 due due ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 blockage blockage NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 formation formation NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 disruption disruption NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2847 # text = The specificity of DNA binding by cell-free synthesized hGR was analyzed further by examining the abilities of various DNAs to compete for binding to a naturally occurring GRE found in the mouse mammary tumor virus-long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 specificity specificity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 free free ADJ JJ Degree=Pos _ _ _ _ 10 synthesized synthesized ADJ JJ Degree=Pos _ _ _ _ 11 hGR hgr NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 further further ADV RB _ _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 examining examine VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 abilities abilitie NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 various various ADJ JJ Degree=Pos _ _ _ _ 21 DNAs Dna NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 compete compete VERB VB VerbForm=Inf _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 naturally naturally ADV RB _ _ _ _ _ 29 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 30 GRE Gre PROPN NNP Number=Sing _ _ _ _ 31 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 mouse mouse NOUN NN Number=Sing _ _ _ _ 35 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 long long ADJ JJ Degree=Pos _ _ _ _ 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2848 # text = Oligonucleotides containing the consensus GRE were the most efficient competitors, and fragments containing regulatory sequences from glucocorticoid-repressible genes were somewhat competitive, whereas single stranded oligonucleotides were unable to compete for mouse mammary tumor virus-long terminal repeat DNA binding, except when competitor was present at extremely high concentrations. 1 Oligonucleotides Oligonucleotides SCONJ IN _ _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 consensus consensus NOUN NN Number=Sing _ _ _ _ 5 GRE GRE ADV RB PronType=Dem _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 most most ADV RBS _ _ _ _ _ 9 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 10 competitors competitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fragments fragment NOUN NNS Number=Plur _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 repressible repressible ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 somewhat somewhat ADV RB _ _ _ _ _ 24 competitive competitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 single single ADJ JJ Degree=Pos _ _ _ _ 28 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 unable unable ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 compete compete VERB VB VerbForm=Inf _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 mouse mouse NOUN NN Number=Sing _ _ _ _ 36 mammary mammary NOUN NN Number=Sing _ _ _ _ 37 tumor tumor NOUN NN Number=Sing _ _ _ _ 38 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 long long ADJ JJ Degree=Pos _ _ _ _ 41 terminal terminal NOUN NN Number=Sing _ _ _ _ 42 repeat repeat NOUN NN Number=Sing _ _ _ _ 43 DNA dna NOUN NN Number=Sing _ _ _ _ 44 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 except except ADP IN _ _ _ _ _ 47 when when ADV WRB PronType=Int _ _ _ _ 48 competitor competitor NOUN NN Number=Sing _ _ _ _ 49 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 50 present present ADJ JJ Degree=Pos _ _ _ _ 51 at at ADP IN _ _ _ _ _ 52 extremely extremely ADV RB _ _ _ _ _ 53 high high ADJ JJ Degree=Pos _ _ _ _ 54 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 2849 # text = Together these studies indicate that hGR synthesized in rabbit reticulocyte lysates displays many of the same properties, including GRE-specific DNA binding, observed for glucocorticoid receptor present in cytosolic extracts of mammalian cells and tissues. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 hGR hGR PROPN NNP Number=Sing _ _ _ _ 7 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 10 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 11 lysates lysate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 many many ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 GRE Gre ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 present present ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2850 # text = Similarities between the effects of dexamethasone and RU486 suggest that the antiglucocorticoid properties of RU486 do not occur at the level of specific DNA binding. 1 Similarities similarity NOUN NNS Number=Plur _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 RU486 RU486 PROPN NNP Number=Sing _ _ _ _ 9 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 properties property NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 RU486 Ru486 NUM CD NumType=Card _ _ _ _ 16 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 occur occur VERB VB VerbForm=Inf _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2851 # text = Document 003001175 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001175 003001175 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2852 # text = Thrombin-induced p65 homodimer binding to downstream NF-kappa B site of the promoter mediates endothelial ICAM-1 expression and neutrophil adhesion. 1 Thrombin- Thrombin- SYM NFP _ _ _ _ SpaceAfter=No 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 p65 p65 NUM CD NumType=Card _ _ _ _ 4 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 8 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 18 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2853 # text = We investigated the mechanisms by which proinflammatory mediator, thrombin, released during intravascular coagulation and tissue injury, induces ICAM-1 (CD54) expression in endothelial cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which DET WDT PronType=Int _ _ _ _ 7 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 8 mediator mediator NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 15 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 tissue tissue NOUN NN Number=Sing _ _ _ _ 18 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 induces induce NOUN NNS Number=Plur _ _ _ _ 21 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CD54 CD54 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2854 # text = Stimulation of HUVEC with thrombin resulted in dose- and time-dependent increases in ICAM-1 mRNA and cell surface expression and in ICAM-1-dependent endothelial adhesivity toward polymorphonuclear leukocytes. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 thrombin thrombin ADP IN _ _ _ _ _ 6 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 increases increase NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 32 adhesivity adhesivity NOUN NN Number=Sing _ _ _ _ 33 toward toward ADP IN _ _ _ _ _ 34 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 35 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2855 # text = Transient transfection of endothelial cells with ICAM-1 promoter luciferase reporter gene (ICAM-1LUC) constructs indicated that deletion of upstream NF-kappa B site (-533 bases from translation start site) had no effect on thrombin responsiveness, whereas mutation/deletion of downstream NF-kappa B site (-223 bases from the translation start site) prevented the activation of ICAM-1 promoter, indicating that the downstream NF-kappa B site is critical for thrombin inducibility. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -1LUC -1luc NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 constructs construct NOUN NNS Number=Plur _ _ _ _ 19 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 deletion deletion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 24 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 (- (- PUNCT . _ _ _ _ SpaceAfter=No 30 533 533 NUM CD NumType=Card _ _ _ _ 31 bases base NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 translation translation NOUN NN Number=Sing _ _ _ _ 34 start start NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 no no DET DT _ _ _ _ _ 39 effect effect NOUN NN Number=Sing _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 42 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 whereas whereas SCONJ IN _ _ _ _ _ 45 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 47 deletion deletion NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 50 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa NOUN NN Number=Sing _ _ _ _ 53 B b NOUN NN Number=Sing _ _ _ _ 54 site site NOUN NN Number=Sing _ _ _ _ 55 (- (- PUNCT . _ _ _ _ SpaceAfter=No 56 223 223 NUM CD NumType=Card _ _ _ _ 57 bases base NOUN NNS Number=Plur _ _ _ _ 58 from from ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 translation translation NOUN NN Number=Sing _ _ _ _ 61 start start NOUN NN Number=Sing _ _ _ _ 62 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 ) ) PUNCT -RRB- _ _ _ _ _ 64 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 activation activation NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 1 1 NUM CD NumType=Card _ _ _ _ 71 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 74 that that SCONJ IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 77 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 79 kappa kappa NOUN NN Number=Sing _ _ _ _ 80 B b NOUN NN Number=Sing _ _ _ _ 81 site site NOUN NN Number=Sing _ _ _ _ 82 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 83 critical critical ADJ JJ Degree=Pos _ _ _ _ 84 for for ADP IN _ _ _ _ _ 85 thrombin thrombin ADP IN _ _ _ _ _ 86 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 87 . . PUNCT . _ _ _ _ _ # sent_id = 2856 # text = NF-kappa B-directed luciferase activity increased approximately 3-fold when cells transfected with the plasmid pNF-kappa BLUC containing five copies of consensus NF-kappa B site linked to a minimal adenovirus E1B promoter-luciferase gene were exposed to thrombin, indicating that activation of NF-kappa B was essential for thrombin response. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 fold fold VERB VB VerbForm=Inf _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 20 pNF pNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 BLUC BLUC NOUN NN Number=Sing _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 five five NUM CD NumType=Card _ _ _ _ 26 copies copy NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 consensus consensus NOUN NN Number=Sing _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 38 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 39 E1B E1b NOUN NN Number=Sing _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 50 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 51 activation activation NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappa kappa PROPN NNP Number=Sing _ _ _ _ 56 B b PROPN NNP Number=Sing _ _ _ _ 57 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 58 essential essential ADJ JJ Degree=Pos _ _ _ _ 59 for for ADP IN _ _ _ _ _ 60 thrombin thrombin ADP IN _ _ _ _ _ 61 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 2857 # text = Gel supershift assays demonstrated that thrombin induced binding of NF-kappa Bp65 (Rel A) to downstream NF-kappa B site of the ICAM-1 promoter. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 supershift supershift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 thrombin thrombin ADP IN _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 Bp65 Bp65 PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Rel Rel PROPN NNP Number=Sing _ _ _ _ 16 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2858 # text = Thrombin receptor activation peptide, a 14-amino-acid peptide representing the new NH2 terminus of proteolytically activated receptor-1, mimicked thrombin's action in inducing ICAM-1 expression. 1 Thrombin Thrombin ADP IN _ _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 representing represent VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 NH2 Nh2 NOUN NN Number=Sing _ _ _ _ 17 terminus terminus NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 proteolytically proteolytically ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 mimicked mimick VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 's 's PART POS _ _ _ _ _ 28 action action NOUN NN Number=Sing _ _ _ _ 29 in in SCONJ IN _ _ _ _ _ 30 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 31 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2859 # text = These data indicate that thrombin activates endothelial ICAM-1 expression and polymorphonuclear leukocyte adhesion by NF-kappa Bp65 binding to the downstream NF-kappa B site of ICAM-1 promoter after proteolytically activated receptor-1 activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 14 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 Bp65 Bp65 PROPN NNP Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 proteolytically proteolytically ADV RB _ _ _ _ _ 37 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -1 -1 NUM CD NumType=Card _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2860 # text = Document 003001176 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001176 003001176 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2861 # text = Constitutive expression c-fos, c-jun, and NF kappa B mRNA is in nucleated fetal blood cells and up-regulation of c-fos and c-jun with anti-CD3 stimulation. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 c- c- PUNCT : _ _ _ _ SpaceAfter=No 4 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B B PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 nucleated nucleated ADJ JJ Degree=Pos _ _ _ _ 17 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 fos fo NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 jun jun NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2862 # text = Fetal and neonatal lymphocytes are relatively resistant to activation and cytokine production when stimulated either via their T-cell antigen receptors or lectins. 1 Fetal Fetal ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 relatively relatively ADV RB _ _ _ _ _ 7 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 when when ADV WRB PronType=Int _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 either either ADV RB _ _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 lectins lectin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2863 # text = The molecular mechanism(s) responsible for this phenomenon have not been clearly elucidated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 s s X AFX _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 clearly clearly ADV RB _ _ _ _ _ 15 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2864 # text = We have hypothesized that such defects in fetal/neonatal T-cell activation may be due to lack of expression of the transcriptional regulatory elements required for T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 defects defect NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 elements element NOUN NNS Number=Plur _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2865 # text = We used reverse transcriptase-polymerase chain reaction to examine both fetal and term neonatal cord bloods for mRNA expression of three transcription factors implicated in T-cell activation: 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 reverse reverse NOUN NN Number=Sing _ _ _ _ 4 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 reaction reaction NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 examine examine NOUN NN Number=Sing _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 fetal fetal NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 term term NOUN NN Number=Sing _ _ _ _ 15 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 16 cord cord NOUN NN Number=Sing _ _ _ _ 17 bloods blood NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 three three NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ # sent_id = 2866 # text = c-jun, c-fos, and NF kappa B (p50 subunit). 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2867 # text = We demonstrate that mRNAs for all three of these regulatory factors are expressed in fetal blood cells by the 27th week of gestation and in term cord bloods. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 27th 27th ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 21 week week NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 gestation gestation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 term term NOUN NN Number=Sing _ _ _ _ 27 cord cord NOUN NN Number=Sing _ _ _ _ 28 bloods bloods NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2868 # text = Activation of term infant cord blood mononuclear cells with anti-CD3 monoclonal antibodies resulted in up-regulation of both c-jun and c-fos mRNAs within 15 min of stimulation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 term term NOUN NN Number=Sing _ _ _ _ 4 infant infant NOUN NN Number=Sing _ _ _ _ 5 cord cord NOUN NN Number=Sing _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 fos fo NOUN NNS Number=Plur _ _ _ _ 26 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 27 within within ADP IN _ _ _ _ _ 28 15 15 NUM CD NumType=Card _ _ _ _ 29 min min NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2869 # text = However, secretion of IL-2 by anti-CD3-stimulated cord blood mononuclear cells was still blunted compared with control cells from adults. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 secretion secretion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -stimulated -stimulated ADJ JJ Degree=Pos _ _ _ _ 11 cord cord NOUN NN Number=Sing _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 blunted blunt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2870 # text = We conclude that fetal nucleated blood cells constitutively express important genes for cytokine regulation and are able to increase intracellular accumulation of the mRNAs for these factors in response to anti-CD3 stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 5 nucleated nucleate ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 express express ADJ JJ Degree=Pos _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 able able ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2871 # text = Thus, qualitative differences in the capacity to regulate these factors could not be shown in fetal blood cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2872 # text = Quantitative experiments comparing binding of these transcription factors to the IL-2 promoter are currently under investigation. 1 Quantitative Quantitative ADJ JJ Degree=Pos _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 currently currently ADV RB _ _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 investigation investigation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2873 # text = Document 003001177 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001177 003001177 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2874 # text = The carboxyl-terminal cytoplasmic domain of CD36 is required for oxidized low-density lipoprotein modulation of NF-kappaB activity by tumor necrosis factor-alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD36 CD36 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 density density NOUN NN Number=Sing _ _ _ _ 16 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 17 modulation modulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2875 # text = The binding of oxidized low-density lipoprotein (Ox LDL) by monocyte-macrophages causes pleiotropic effects, including changes in gene expression, and is thought to represent an early event in atherogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 oxidized oxidize ADJ JJ Degree=Pos _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 density density NOUN NN Number=Sing _ _ _ _ 8 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Ox Ox PROPN NNP Number=Sing _ _ _ _ 11 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 causes cause NOUN NNS Number=Plur _ _ _ _ 17 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 18 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 represent represent VERB VB VerbForm=Inf _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 event event NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2876 # text = The integral membrane glycoprotein CD36 appears to play a physiological role in binding and uptake of Ox LDL by monocyte-macrophages, although the molecular events associated with CD36-Ox LDL interaction are unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 integral integral ADJ JJ Degree=Pos _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 5 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 36 36 NUM CD NumType=Card _ _ _ _ 7 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 uptake uptake NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Ox Ox PROPN NNP Number=Sing _ _ _ _ 19 LDL LDL PROPN NNP Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 although although SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 events event NOUN NNS Number=Plur _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 CD36 Cd36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Ox Ox PROPN NNP Number=Sing _ _ _ _ 33 LDL Ldl PROPN NNP Number=Sing _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2877 # text = To approach this issue, we used CD36 transfected Chinese hampster ovary (CHO) cells, exposed them to Ox LDL, and determined changes in the activity of the transcription factor NF-kappaB. 1 To to PART TO _ _ _ _ _ 2 approach approach VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 issue issue NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 36 36 NUM CD NumType=Card _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 12 hampster hampster NOUN NN Number=Sing _ _ _ _ 13 ovary ovary NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CHO cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 Ox Ox PROPN NNP Number=Sing _ _ _ _ 23 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 changes change NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2878 # text = We report here that Ox LDL enhanced DNA binding activity of nuclear extracts to an NF-kappaB sequence following activation of CD36-producing CHO cells with the proinflammatory cytokine tumor necrosis factor-alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Ox Ox PROPN NNP Number=Sing _ _ _ _ 6 LDL LDL PROPN NNP Number=Sing _ _ _ _ 7 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 CD36 CD36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -producing -produce VERB VBG VerbForm=Ger _ _ _ _ 25 CHO Chough PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 30 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 31 tumor tumor NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2879 # text = This enhanced DNA binding activity was inhibited by coincubation of CD36 transfected cells with the human CD36-specific antibody OKM5. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 coincubation coincubation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD36 CD36 NUM CD NumType=Card _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 CD36 Cd36 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 19 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 20 OKM5 Okm5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2880 # text = We also determined that activation of NF-kappaB 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ # sent_id = 2881 # text = DNA binding activity required an intact carboxyl-terminal cytoplasmic segment on CD36. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 intact intact ADJ JJ Degree=Pos _ _ _ _ 7 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 10 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2882 # text = Our results support the idea that human CD36 mediates signal transduction events in response to Ox LDL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 idea idea NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CD36 Cd36 NOUN NN Number=Sing _ _ _ _ 9 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 Ox Ox PROPN NNP Number=Sing _ _ _ _ 17 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2883 # text = Document 003001178 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001178 003001178 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2884 # text = One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter. 1 One one NUM CD NumType=Card _ _ _ _ 2 base base NOUN NN Number=Sing _ _ _ _ 3 pair pair NOUN NN Number=Sing _ _ _ _ 4 change change NOUN NN Number=Sing _ _ _ _ 5 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -enhancer -enhancer NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2885 # text = The inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Il Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 like like ADJ JJ Degree=Pos _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 GGGATTTCACC Gggatttcacc NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 essential essential ADJ JJ Degree=Pos _ _ _ _ 31 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 acting acte VERB VBG VerbForm=Ger _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 35 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2886 # text = When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 1 When when ADV WRB PronType=Int _ _ _ _ 2 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 so so ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 distal distal ADJ JJ Degree=Pos _ _ _ _ 13 T t NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 E14 E14 PROPN NNP Number=Sing _ _ _ _ # sent_id = 2887 # text = T lymphoma cells, but not in HeLa cells. 1 T t VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2888 # text = In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. 1 In in ADP IN _ _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Il il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 secreting secreting NOUN NN Number=Sing _ _ _ _ 10 El4 El4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 individual individual ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 TCEd TCEd VERB VB VerbForm=Inf _ _ _ _ 19 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2889 # text = The binding of the most prominent factor, named TCF-1 (T cell factor 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 most most ADV RBS _ _ _ _ _ 6 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 T t NUM CD NumType=Card _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 2890 # text = 1), is correlated with the proto-enhancer activity of TCEd. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -enhancer -enhancer NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2891 # text = TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. 1 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 consists consist NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 about about ADP IN _ _ _ _ _ 10 50 50 NUM CD NumType=Card _ _ _ _ 11 kD kD NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 105 105 NUM CD NumType=Card _ _ _ _ 14 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 former former ADJ JJ Degree=Pos _ _ _ _ 18 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 50 50 NUM CD NumType=Card _ _ _ _ 25 kD kd NOUN NN Number=Sing _ _ _ _ 26 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2892 # text = Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. 1 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kB kb PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 binds bind NOUN NNS Number=Plur _ _ _ _ 19 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kB kb PROPN NNP Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 TCEd TCEd VERB VB VerbForm=Inf _ _ _ _ 26 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2893 # text = The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 conversion conversion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 9 perfect perfect ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kB kb PROPN NNP Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 leads lead NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 tighter tighter NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kB kb PROPN NNP Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 27 DNA Dna NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 functional functional ADJ JJ Degree=Pos _ _ _ _ 33 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 41 converted converted ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 ' ' PUNCT '' _ _ _ _ _ 43 TCEd Tce NOUN NN Number=Sing _ _ _ _ 44 motifs motif NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2894 # text = Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 substitution substitution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 underlined underlin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 residue residue NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GGGATTTCACC GGGATTTCACC PROPN NNP Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ _ 17 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 functioning functioning VERB VBG VerbForm=Ger _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 El4 El4 PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2895 # text = These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TCEd tced NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 involved involved ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell PROPN NNP Number=Sing _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Il Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2896 # text = Document 003001179 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001179 003001179 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2897 # text = CD2 signalling induces phosphorylation of CREB in primary lymphocytes. 1 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 2 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CREB CREB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2898 # text = Promoter sequences responsive to cyclic AMP (cAMP) are found in a number of cellular genes, and bind transcription factors of the cAMP response element binding protein (CREB)/activating transcription factor-1 (ATF-1) family. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 sequences sequence NOUN NNS Number=Plur _ _ _ _ 3 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 6 AMP Amp PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cAMP camp PROPN NNP Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 element element NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 activating activat VERB VBG VerbForm=Ger _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -1 -1 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ATF Atf NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2899 # text = We have used a human T-lymphotropic virus type 1 (HTLV-1) model of cAMP response element (CRE) transcription to investigate the influence of lymphocyte activation on transcription from homologous regions in the viral promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 model model NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 36 regions region NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2900 # text = We previously demonstrated increased HTLV-1 transcription following CD2 but not CD3 receptor cross-linking. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 CD3 CD3 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -linking -link VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2901 # text = We hypothesized that this increased viral transcription was mediated, in part, through the phosphorylation of CREB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 viral viral ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2902 # text = Therefore, we investigated CD2 and CD3 receptor-mediated signalling in primary human peripheral blood mononuclear cells (PBMC). 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 CD2 CD2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CD3 CD3 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signalling signalling NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2903 # text = CD2, but not CD3, cross-linking increased cAMP detected by competitive enzyme-linked immunosorbent assay (ELISA) approximately fourfold. 1 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 but but CCONJ CC _ _ _ _ _ 4 not not ADV RB _ _ _ _ _ 5 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 8 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cAMP camp NOUN NNS Number=Plur _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 14 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 immunosorbent immunosorbent ADJ JJ Degree=Pos _ _ _ _ 18 assay assay NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 approximately approximately ADV RB _ _ _ _ _ 23 fourfold fourfold VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2904 # text = CD2 cross-linking concurrently increased phosphorylation of CREB detected by immunoblot assay eightfold. 1 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 4 concurrently concurrently ADV RB _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ _ 13 eightfold eightfold NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2905 # text = Consistent with post-translational regulation, no change in total level of CREB protein was observed. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 post post X AFX _ _ _ _ SpaceAfter=No 4 -translational -translational ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 change change NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 total total ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CREB CREB NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 observed observed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2906 # text = Phosphorylation of CREB occurred through a herbimycin A and Rp-cAMP- sensitive pathway, suggesting phosphorylation required antecedent activation of both protein tyrosine kinases (PTK) and protein kinase A (PKA). 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CREB CREB PROPN NNP Number=Sing _ _ _ _ 4 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Rp-cAMP Rp-camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 antecedent antecedent ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 A A PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2907 # text = Both CD2 and CD3 cross-linking increased binding of nuclear proteins to a radiolabelled CRE oligonucleotide probe in electrophoretic mobility shift assays suggesting that lymphocyte activation enhances binding independently of phosphorylation of CREB at serine 133. 1 Both both DET DT _ _ _ _ _ 2 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 radiolabelled radiolabell VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 CRE Cre NOUN NN Number=Sing _ _ _ _ 16 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 17 probe probe NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 enhances enhance NOUN NNS Number=Plur _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 independently independently ADV RB _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 CREB CREB PROPN NNP Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 serine serine NOUN NN Number=Sing _ _ _ _ 36 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2908 # text = These data indicate specific modulation of the CREB/ATF-1 family of transcription factors by the CD2 signalling pathway and suggest CD2 receptor modulation of CRE-mediated transcription following ligand engagement (e.g. cell-to-cell contact). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 modulation modulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 20 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 24 CD2 CD2 NUM CD NumType=Card _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 modulation modulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 following follow VERB VBG VerbForm=Ger _ _ _ _ 33 ligand ligand NOUN NN Number=Sing _ _ _ _ 34 engagement engagement NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 e.g. e.g. X FW _ _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 to to ADP IN _ _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 contact contact NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2909 # text = Document 003001180 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001180 003001180 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2910 # text = Human immunodeficiency virus type-1 transcription: role of the 5'-untranslated leader region (review). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 16 leader leader NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2911 # text = Human immunodeficiency virus type-1 (HIV-1) transcription is dependent on the interaction of host-cell transcription factors with cis-regulatory DNA elements within the viral long terminal repeat (LTR). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 within within ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 viral viral ADJ JJ Degree=Pos _ _ _ _ 32 long long ADJ JJ Degree=Pos _ _ _ _ 33 terminal terminal NOUN NN Number=Sing _ _ _ _ 34 repeat repeat NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2912 # text = Much attention has focused on the series of sequence elements upstream of the transcriptional initiation site in the U3 region of the LTR including the Sp1 and NF-kappaB binding sites. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 attention attention NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 series series NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 upstream upstream NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 U3 U3 NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR Ltr NOUN NN Number=Sing _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2913 # text = Recent studies, however, demonstrate that the transcribed 5'-untranslated leader region (5'-UTR) also contains important transcriptional elements. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcribed transcribe NOUN NN Number=Sing _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 '- '- PUNCT . _ _ _ _ SpaceAfter=No 12 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 13 leader leader NOUN NN Number=Sing _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 '- '- PUNCT . _ _ _ _ SpaceAfter=No 18 UTR Utr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2914 # text = These regulatory elements situated downstream of transcription interact with constitutive and inducible transcription factors, mediate transmission of cellular activation signals, and are important for efficient HIV-1 transcription and replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 situated situate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 downstream downstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 interact interact NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 17 transmission transmission NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2915 # text = The 5'-UTR contains binding sites for the transcription factors AP-1, NF-kappaB, NF-AT, IRF, and Sp1. Mutations in these binding sites can interfere with the viral response to cell activation signals, decrease LTR transcription, and inhibit viral replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 UTR UTR PROPN NNP Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Sp1 sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 binding binding ADJ JJ Degree=Pos _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 can can AUX MD VerbForm=Fin _ _ _ _ 36 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 cell cell VERB VB VerbForm=Inf _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 decrease decrease NOUN NN Number=Sing _ _ _ _ 47 LTR Ltr NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 viral viral ADJ JJ Degree=Pos _ _ _ _ 53 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2916 # text = The 5'-UTR also interacts with a specific nucleosome that is rapidly displaced during transcriptional activation of the latent provirus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 UTR UTR PROPN NNP Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 nucleosome nucleosome NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 displaced displace VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 latent latent ADJ JJ Degree=Pos _ _ _ _ 22 provirus provirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2917 # text = We propose that the inducible transcription factor binding sites in the 5'-UTR comprise a downstream enhancer domain that can function independent of, or in concert with, the LTR promoter to rapidly increase latent proviral transcription in response to cell activation signals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 UTR UTR ADV RB _ _ _ _ _ 16 comprise comprise VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 function function VERB VB VerbForm=Inf _ _ _ _ 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 of of ADP IN _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 concert concert NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 LTR LTR ADJ JJ Degree=Pos _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 rapidly rapidly ADV RB _ _ _ _ _ 37 increase increase VERB VB VerbForm=Inf _ _ _ _ 38 latent latent ADJ JJ Degree=Pos _ _ _ _ 39 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 cell cell VERB VB VerbForm=Inf _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2918 # text = In this review, we describe the host-cell transcription factors that interact with the 5'-UTR and discuss their role in the transcriptional regulation of HIV-1 gene expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' 's NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 UTR UTR NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2919 # text = Document 003001181 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001181 003001181 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2920 # text = T-cell expression of the human GATA-3 gene is regulated by a non-lineage-specific silencer. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 non-lineage non-lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2921 # text = The GATA-3 transcription factor is required for development of the T-cell lineage and Th2 cytokine gene expression in CD4 T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 23 T- T- PUNCT , _ _ _ _ SpaceAfter=No 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2922 # text = We have mapped the DNase-I-hypersensitive (HS) regions of the human GATA-3 gene in T-cells and non-T-cells and studied their transcriptional activities. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mapped map VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HS h NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 regions region NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2923 # text = HS I-III, located 5' from the transcriptional initiation site, were found in hematopoietic and non-hematopoietic cells, whereas HS IV-VII, located 3' from the transcriptional start site, were exclusively observed in T-cells. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 III Iii NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 non-hematopoietic non-hematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 HS HS PROPN NNP Number=Sing _ _ _ _ 25 IV IV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 VII VII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ' ' NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 start start NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 exclusively exclusively ADV RB _ _ _ _ _ 40 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2924 # text = Among these hypersensitive sites, two transcriptional control elements were found, one in the first intron of the GATA-3 gene and the other between 8.3 and 5.9 kilobases 5' from the GATA-3 transcriptional initiation site. 1 Among among ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 intron intron NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 between between ADP IN _ _ _ _ _ 28 8.3 8.3 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 5.9 5.9 NUM CD NumType=Card _ _ _ _ 31 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 32 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 3 3 NUM CD NumType=Card _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 initiation initiation NOUN NN Number=Sing _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2925 # text = The first intron acted as a strong transcriptional activator in a position-dependent manner and with no cell-type specificity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 intron intron NOUN NN Number=Sing _ _ _ _ 4 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2926 # text = The upstream regulatory element could confer T-cell specificity to the GATA-3 promoter activity, and analysis of this region revealed a 707-base pair silencer that drastically inhibited GATA-3 promoter activity in non-T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 confer confer VERB VB VerbForm=Inf _ _ _ _ 7 T- T- SYM NFP _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specificity specificity NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 707 707 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -base -base NOUN NN Number=Sing _ _ _ _ 27 pair pair NOUN NN Number=Sing _ _ _ _ 28 silencer silencer NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 drastically drastically ADV RB _ _ _ _ _ 31 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 3 3 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2927 # text = Two CAGGTG E-boxes, located at the 5'- and 3'-ends of the silencer, were necessary for this silencer activity. 1 Two two NUM CD NumType=Card _ _ _ _ 2 CAGGTG Caggtg ADJ JJ Degree=Pos _ _ _ _ 3 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ends end NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 silencer silencer NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2928 # text = The 3'-CAGGTG E-box could bind USF proteins, the ubiquitous repressor ZEB, or the basic helix-loop-helix proteins E2A and HEB, and we showed that a competition between ZEB and E2A/HEB proteins is involved in the silencer activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 CAGGTG CAGGTG NOUN NN Number=Sing _ _ _ _ 6 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 box box NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 USF USF ADP RP _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 ZEB ZEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 basic basic ADJ JJ Degree=Pos _ _ _ _ 21 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 helix helix NOUN NN Number=Sing _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 E2A E2A PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HEB HEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 31 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 competition competition NOUN NN Number=Sing _ _ _ _ 35 between between ADP IN _ _ _ _ _ 36 ZEB ZEB PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 E2A E2A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 / / PUNCT , _ _ _ _ SpaceAfter=No 40 HEB Heb PROPN NNP Number=Sing _ _ _ _ 41 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 involved involved ADJ JJ Degree=Pos _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 silencer silencer NOUN NN Number=Sing _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2929 # text = Document 003001182 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001182 003001182 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2930 # text = Analysis of the ligand-binding domain of human retinoic acid receptor alpha by site-directed mutagenesis. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 11 acid acid ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2931 # text = Three subtypes of retinoic acid receptors (RAR), termed RAR alpha, RAR beta, and RAR gamma, have been described. 1 Three three NUM CD NumType=Card _ _ _ _ 2 subtypes subtype NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid ADJ JJ Degree=Pos _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 RAR RAR ADP IN _ _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 RAR RAR PROPN NNP Number=Sing _ _ _ _ 16 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 RAR RAR PROPN NNP Number=Sing _ _ _ _ 20 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2932 # text = They are composed of different structural domains, including distinct domains for DNA and ligand binding. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 domains domain NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2933 # text = RARs specifically bind all-trans-retinoic acid (RA), 9-cis-RA, and retinoid analogs. 1 RARs RAR NOUN NNS Number=Plur _ _ _ _ 2 specifically specifically ADV RB _ _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 9- 9- SYM SYM _ _ _ _ SpaceAfter=No 15 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 21 analogs analog NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2934 # text = In this study, we examined the functional role of cysteine and arginine residues in the ligand-binding domain of hRAR alpha (hRAR alpha-LBD, amino acids 154 to 462). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 arginine arginine NUM CD NumType=Card _ _ _ _ 14 residues residue NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 hRAR hRAR NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 hRAR hRAR NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 LBD lbd NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 amino amino DET DT _ _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ _ 32 154 154 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 462 462 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2935 # text = All conserved cysteine and arginine residues in this domain were mutated by site-directed mutagenesis, and the mutant proteins were characterized by blocking reactions, ligand-binding experiments, transactivation assays, and protease mapping. 1 All all DET DT _ _ _ _ _ 2 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 arginine arginine NOUN NN Number=Sing _ _ _ _ 6 residues residue NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by SCONJ IN _ _ _ _ _ 25 blocking block VERB VBG VerbForm=Ger _ _ _ _ 26 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 34 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 protease protease NOUN NN Number=Sing _ _ _ _ 38 mapping mapping NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2936 # text = Changes of any cysteine residue of the hRAR alpha-LBD had no significant influence on the binding of all-trans RA or 9-cis RA. 1 Changes change NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 5 residue residue NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hRAR hRAR PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 LBD LBD PROPN NNP Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 significant significant ADJ JJ Degree=Pos _ _ _ _ 15 influence influence NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 binding binding NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 all all DET DT _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 trans tran NOUN NNS Number=Plur _ _ _ _ 23 RA RA NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 cis cis NOUN NN Number=Sing _ _ _ _ 28 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2937 # text = Interestingly, residue C-235 is specifically important in antagonist binding. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 residue residue VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 235 235 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 antagonist antagonist ADJ JJ Degree=Pos _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2938 # text = With respect to arginine residues, only the two single mutations of R-276 and R-394 to alanine showed a dramatic decrease of agonist and antagonist binding whereas the R272A mutation showed only a slight effect. 1 With with ADP IN _ _ _ _ _ 2 respect respect NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 arginine arginine VERB VB VerbForm=Inf _ _ _ _ 5 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 single single ADJ JJ Degree=Pos _ _ _ _ 11 mutations mutation NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 R- R- SYM SYM _ _ _ _ SpaceAfter=No 14 276 276 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 R- R- SYM SYM _ _ _ _ SpaceAfter=No 17 394 394 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 alanine alanine NUM CD NumType=Card _ _ _ _ 20 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 decrease decrease NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 agonist agonist NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 whereas whereas SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 R272 R272 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 mutation mutation NOUN NN Number=Sing _ _ _ _ 34 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 only only ADV RB _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 slight slight ADJ JJ Degree=Pos _ _ _ _ 38 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2939 # text = For all other arginine mutations, no differences in affinity were detectable. 1 For for ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 arginine arginine NOUN NN Number=Sing _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2940 # text = The two mutations R217A and R294A caused an increased binding efficiency for antagonists but no change in agonist binding. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 R217A R217A PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 R294 R294 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 A A PROPN NNP Number=Sing _ _ _ _ 8 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 change change NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 20 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2941 # text = From these results, we can conclude that electrostatic interactions of retinoids with the RAR alpha-LBD play a significant role in ligand binding. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 conclude conclude VERB VB VerbForm=Inf _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 electrostatic electrostatic ADJ JJ Degree=Pos _ _ _ _ 10 interactions interaction NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 RAR RAR PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 LBD lbd PROPN NNP Number=Sing _ _ _ _ 19 play play VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2942 # text = In addition, antagonists show distinctly different requirements for efficient binding, which may contribute to their interference in the ligand-inducible transactivation function of RAR alpha. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 distinctly distinctly ADV RB _ _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 requirements requirement NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Int _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 interference interference NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RAR RAR PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2943 # text = Document 003001183 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001183 003001183 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2944 # text = Abundant expression of erythroid transcription factor P45 NF-E2 mRNA in human peripheral granurocytes. 1 Abundant Abundant ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 P45 P45 PROPN NNP Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 E2 E2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 granurocytes granurocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2945 # text = Transcription factor NF-E2 is crucial for regulation of erythroid-specific gene expression. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 E2 e2 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2946 # text = p45 subunit of NF-E2 contains a basic-leucine zipper domain and dimerizes with the small Maf family protein to form functional NF-E2 complex. 1 p45 p45 NUM CD NumType=Card _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 E2 e2 NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 basic basic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 leucine leucine NOUN NN Number=Sing _ _ _ _ 12 zipper zipper NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dimerizes dimerize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 small small ADJ JJ Degree=Pos _ _ _ _ 19 Maf Maf NOUN NN Number=Sing _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 form form VERB VB VerbForm=Inf _ _ _ _ 24 functional functional ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 E2 e2 NOUN NN Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2947 # text = While p45 expression was shown to be restricted to erythroid cells, megakaryocytes and mast cells in hematopoietic lineage, we found in this study that p45 mRNA is abundantly transcribed in the granulocyte fraction of human peripheral blood cells. 1 While while SCONJ IN _ _ _ _ _ 2 p45 p45 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 erythroid erythroid VERB VB VerbForm=Inf _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 mast mast ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 study study NOUN NN Number=Sing _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 p45 p45 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 abundantly abundantly ADV RB _ _ _ _ _ 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 35 fraction fraction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 39 blood blood NOUN NN Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2948 # text = As neutrophils occupy approximately 92% of the cells in granulocyte fraction of human peripheral blood cells. 1 As as SCONJ IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 occupy occupy VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 12 fraction fraction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2949 # text = As neutrophils occupy approximately 92% of the cells in this fraction, the cells expressing p45 is most likely to be neutrophils. 1 As as SCONJ IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 occupy occupy VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 17 p45 p45 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 likely likely ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2950 # text = p45 mRNA is also expressed in HL-60 promyelocytes, albeit the expression level is much lower than that of the granulocyte fraction. 1 p45 p45 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ _ 10 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 albeit albeit SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 much much ADV RB _ _ _ _ _ 18 lower lower ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 24 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2951 # text = HL-60 cells were found to express mafK mRNA, indicating the presence of genuine NF-E2 complex in the cells. 1 HL Hl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 60 60 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 express express VERB VB VerbForm=Inf _ _ _ _ 9 mafK mafK PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 genuine genuine PROPN NNP Number=Sing _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 E2 e2 NUM CD NumType=Card _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2952 # text = Although p45 mRNA is transcribed from two different promoters, aNF-E2 promoter and fNF-E2 promoter, in erythroid and megakaryocytic lineage cells, p45 mRNA is transcribed only from aNF-E2 promoter. 1 Although although SCONJ IN _ _ _ _ _ 2 p45 p45 PROPN NNP Number=Sing _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 aNF anf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 E2 e2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 fNF fnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 E2 e2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 25 lineage lineage NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 p45 p45 NUM CD NumType=Card _ _ _ _ 29 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 only only ADV RB _ _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 aNF aNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 E2 E2 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2953 # text = The expression of p45 megakaryocytic lineage cells, p45 mRNA is transcribed only from aNF-E2 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p45 p45 NUM CD NumType=Card _ _ _ _ 5 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 6 lineage lineage NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p45 p45 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 aNF aNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 E2 E2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2954 # text = The expression of p45 mRNA in the neutrophils declined rapidly after transfer of the cells to in vitro culture and G-CSF could not sustain the expression from the down-regulation, suggesting the E2 may also participate in the regulation of neutrophil-specific gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p45 p45 NUM CD NumType=Card _ _ _ _ 5 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 9 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 transfer transfer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 19 culture culture NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 CSF Csf NOUN NN Number=Sing _ _ _ _ 23 could could AUX MD VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 sustain sustain VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 E2 e2 NOUN NN Number=Sing _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 also also ADV RB _ _ _ _ _ 39 participate participate VERB VB VerbForm=Inf _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 regulation regulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 neutrophil neutrophil ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2955 # text = Document 003001184 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001184 003001184 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2956 # text = Regulation of CD95 (Fas) ligand expression by TCR-mediated signaling events. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD95 CD95 PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2957 # text = Stimulation of mature peripheral T cells by TCR engagement results in activation of signals that drive induction of cytokine gene expression and clonal expansion. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mature mature ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TCR Tcr NOUN NN Number=Sing _ _ _ _ 9 engagement engagement NOUN NN Number=Sing _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 drive drive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 24 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2958 # text = However, under some conditions, engagement of the TCR leads instead to apoptosis. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 under under ADP IN _ _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 engagement engagement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TCR TCR PROPN NNP Number=Sing _ _ _ _ 11 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 instead instead ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2959 # text = Recent studies demonstrate that TCR-stimulated apoptosis requires expression of CD95 ligand on activated T cells followed by an interaction between CD95 ligand and the CD95 receptor also expressed on this population. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD95 CD95 NUM CD NumType=Card _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CD95 Cd95 PROPN NNP Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2960 # text = The experiments reported in this study were designed to address the signaling events triggered by TCR engagement that are important for regulating CD95 ligand gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 address address VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 events event NOUN NNS Number=Plur _ _ _ _ 14 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TCR Tcr NOUN NN Number=Sing _ _ _ _ 17 engagement engagement NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 for for SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 CD95 CD95 NUM CD NumType=Card _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2961 # text = To approach this, we generated a luciferase reporter construct containing elements of the CD95 ligand promoter. 1 To to PART TO _ _ _ _ _ 2 approach approach VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD95 CD95 PROPN NNP Number=Sing _ _ _ _ 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2962 # text = Using a previously described mutant of the Jurkat T cell line, we show that proximal signaling events dependent on the presence of the CD45 tyrosine phosphatase are required for TCR-stimulated CD95 ligand expression. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 signaling signal NOUN NN Number=Sing _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ _ 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 35 ligand ligand NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2963 # text = Transient transfection studies demonstrate further that TCR-stimulated activation of the Ras signaling pathway is required for optimal activation of CD95 ligand. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 further further SCONJ IN _ _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Ras Ras PROPN NNP Number=Sing _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD95 CD95 NUM CD NumType=Card _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2964 # text = Next, in an effort to determine critical transcription factors that regulate CD95 ligand expression, we demonstrate a cyclosporin A-sensitive nuclear factor-AT response element in the promoter region of this gene that is critical for optimal CD95 ligand reporter activity in stimulated T cells. 1 Next next ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 effort effort NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CD95 CD95 NUM CD NumType=Card _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT at NOUN NN Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 critical critical ADJ JJ Degree=Pos _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 42 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 43 ligand ligand NUM CD NumType=Card _ _ _ _ 44 reporter reporter NOUN NN Number=Sing _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2965 # text = Together, these studies begin a dissection of the biochemical events that lead to expression of CD95 ligand, a required step for TCR-induced apoptosis. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 begin begin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 dissection dissection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 11 events event NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CD95 CD95 NUM CD NumType=Card _ _ _ _ 18 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 step step NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 apoptosis. apoptosis. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2966 # text = Document 003001185 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001185 003001185 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2967 # text = Dependence for the proliferative response to erythropoietin on an established erythroid differentiation program in a human hematopoietic cell line, UT-7. 1 Dependence Dependence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 erythropoietin erythropoietin VERB VB VerbForm=Inf _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 program program NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2968 # text = Erythroid differentiation involves the activation of a number of erythroid-specific genes, most of which, including the globin genes and the erythropoietin receptor (Epo-R) gene, are, at least in part, regulated by the transcription factor GATA-1. 1 Erythroid Erythroid ADJ JJ Degree=Pos _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 most most ADJ JJS Degree=Sup _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 at at ADV RB _ _ _ _ _ 37 least least ADV RBS Degree=Sup _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ _ 46 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2969 # text = In order to understand the relationship, if any, between expression of GATA-1, response to Epo and erythroid differentiation, we analyzed the expression of GATA-1, Epo-R and globin genes in an Epo-dependent human cell line, UT-7 Epo. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 understand understand VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 relationship relationship NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 if if SCONJ IN _ _ _ _ _ 9 any any DET DT _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 Epo Epo PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -R -r PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 globin globin ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 Epo-dependent Epo-dependent ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 7 7 NUM CD NumType=Card _ _ _ _ 49 Epo Epo NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2970 # text = The results were compared to those obtained with the parental granulocyte-macrophage colony-stimulating factor (GM-CSF)-dependent cell line, UT-7, which has a predominantly megakaryoblastic phenotype and is unable to proliferate continuously in the presence of Epo. UT-7 Epo and UT-7 expressed similar levels of GATA-1 mRNA and binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 parental parental ADJ JJ Degree=Pos _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GM-CSF GM-CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 predominantly predominantly ADV RB _ _ _ _ _ 34 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 35 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 unable unable ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 41 continuously continuously ADV RB _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 presence presence NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 Epo. Epo. PROPN NNP Number=Sing _ _ _ _ 47 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 -7 -7 NUM CD NumType=Card _ _ _ _ 49 Epo Epo PROPN NNP Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 UT ut PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 7 7 NUM CD NumType=Card _ _ _ _ 54 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 similar similar ADJ JJ Degree=Pos _ _ _ _ 56 levels level NOUN NNS Number=Plur _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ _ 61 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 62 and and CCONJ CC _ _ _ _ _ 63 binding bind VERB VBG VerbForm=Ger _ _ _ _ 64 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 2971 # text = The two lines also expressed comparable levels of Epo-R mRNA while the number of Epo-binding sites on UT-7 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -R -R PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Epo- Epo- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 2972 # text = Epo cells was one-sixth the number of UT-7 cells (2400 +/- 3 vs. 13,800 +/- 300). 1 Epo Epo ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 sixth sixth SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 7 7 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2400 2400 NUM CD NumType=Card _ _ _ _ 16 +/- +/- SYM SYM _ _ _ _ _ 17 3 3 NUM CD NumType=Card _ _ _ _ 18 vs. vs. NOUN NNS Number=Plur _ _ _ _ 19 13,800 13,800 NUM CD NumType=Card _ _ _ _ 20 +/- +/- SYM SYM _ _ _ _ _ 21 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2973 # text = This difference in the number of binding sites could be due to differences in cell surface (UT-7 cells are 20% smaller than the parental UT-7 cells) or in receptor turnover. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 number number NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 binding binding ADJ JJ Degree=Pos _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 surface surface NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 7 7 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ _ 25 smaller smaller ADJ JJR Degree=Cmp _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 parental parental ADJ JJ Degree=Pos _ _ _ _ 29 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2974 # text = By Northern analysis, UT-7 cells expressed detectable levels of beta- and gamma-globin but not alpha-globin. 1 By by ADP IN _ _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2975 # text = In comparison, UT-7 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 2976 # text = Epo cells expressed alpha-globin and higher levels of gamma-globin (5-fold) and beta-globin (from barely to clearly detectable). 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 higher higher ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 from from ADP IN _ _ _ _ _ 25 barely barely ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 clearly clearly ADV RB _ _ _ _ _ 28 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2977 # text = Globin chains (alpha, beta and gamma) were clearly detectable by affinity chromatography in UT-7 1 Globin Globin ADJ JJ Degree=Pos _ _ _ _ 2 chains chain NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 clearly clearly ADV RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 affinity affinity NOUN NN Number=Sing _ _ _ _ 15 chromatography chromatography NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 2978 # text = Epo but not in UT-7 cells. 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 but but CCONJ CC _ _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 2979 # text = The frequency of the cells which expressed beta- and gamma- globin genes in the two cell populations was measured by immunofluorescence with beta- and gamma-specific antibodies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 frequency frequency NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 populations population NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2980 # text = The number of gamma-positive cells and their fluorescence intensity were higher in UT-7 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 11 intensity intensity NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 higher higher ADJ JJR Degree=Cmp _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 2981 # text = Epo than in UT-7 cells (0 to 17% barely positive cells and 23 to 40% clearly positive cells, respectively), indicating that the increase in globin mRNA observed in UT-7 1 Epo Epo ADV RB _ _ _ _ _ 2 than than ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 7 7 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 0 0 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 % % SYM NN Number=Sing _ _ _ _ 13 barely barely ADV RB _ _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 23 23 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 % % SYM NN Number=Sing _ _ _ _ 21 clearly clearly ADV RB _ _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 increase increase NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 globin globin PROPN NNP Number=Sing _ _ _ _ 34 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 35 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 2982 # text = Epo is due to both an increase of gene expression per cell and an increase in numbers of cells containing gamma-globin. 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 per per ADP IN _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 numbers number NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2983 # text = The levels of GATA-1, Epo-R and globin mRNA expressed were not affected by a 24-hour incubation of either cell line with Epo, GM-CSF or interleukin-3 (IL-3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -R -R PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 globin globin PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 hour hour NOUN NN Number=Sing _ _ _ _ 22 incubation incubation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 either either DET DT _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 CSF CSF PROPN NNP Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 3 3 NUM CD NumType=Card _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2984 # text = (ABSTRACT TRUNCATED AT 400 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 400 400 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2985 # text = Document 003001186 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001186 003001186 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2986 # text = Epstein-Barr viral latency is disrupted by the immediate-early BRLF1 protein through a cell-specific mechanism. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 latency latency NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 BRLF1 Brlf1 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2987 # text = Epstein-Barr virus (EBV), the causative agent of infectious mononucleosis, is a human herpesvirus associated with epithelial cell malignancies (nasopharyngeal carcinoma) as well as B-cell malignancies. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 causative causative ADJ JJ Degree=Pos _ _ _ _ 11 agent agent NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 14 mononucleosis mononucleosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 malignancies malignancy NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 27 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 malignancies malignancy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2988 # text = Understanding how viral latency is disrupted is a central issue in herpesvirus biology. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 how how ADV WRB PronType=Int _ _ _ _ 3 viral viral ADJ JJ Degree=Pos _ _ _ _ 4 latency latency NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 central central ADJ JJ Degree=Pos _ _ _ _ 10 issue issue NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 13 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2989 # text = Epithelial cells are the major site of lytic EBV replication within the human host, and viral reactivation occurs in EBV-associated nasopharyngeal carcinomas. 1 Epithelial Epithelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 19 occurs occur NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 25 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2990 # text = It is known that expression of a single viral immediate-early protein, BZLF1, is sufficient to initiate the switch from latent to lytic infection in B cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 single single ADJ JJ Degree=Pos _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 switch switch NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 latent latent NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2991 # text = Cellular regulation of BZLF1 transcription is therefore thought to play a key role in regulating the stringency of viral latency. 1 Cellular celular ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BZLF1 BZLF1 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 therefore therefore ADV RB _ _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 play play VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 key key ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 stringency stringency NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2992 # text = Here we show that, unexpectedly, expression of another viral immediate-early protein, BRLF1, can disrupt viral latency in an epithelial cell-specific fashion. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 another another DET DT _ _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 BRLF1 BRLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 latency latency NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 28 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2993 # text = Therefore, the mechanisms leading to disruption of EBV latency appear to be cell-type specific. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 leading lead VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 disruption disruption NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 latency latency NOUN NN Number=Sing _ _ _ _ 11 appear appear VERB VB VerbForm=Inf _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2994 # text = Document 003001187 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001187 003001187 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2995 # text = Regulation of c-jun mRNA expression by hydroxyurea in human K562 cells during erythroid differentiation [published erratum appears in Biochim Biophys Acta 1995 Dec 27;1264(3):409] 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 hydroxyurea hydroxyurea NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 K562 K562 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 erratum erratum NOUN NN Number=Sing _ _ _ _ 19 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Biochim Biochim PROPN NNP Number=Sing _ _ _ _ 22 Biophys Biophys PROPN NNP Number=Sing _ _ _ _ 23 Acta Acta PROPN NNP Number=Sing _ _ _ _ 24 1995 1995 NUM CD NumType=Card _ _ _ _ 25 Dec Dec PROPN NNP Number=Sing _ _ _ _ 26 27;1264 27;1264 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 :409 :409 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 2996 # text = Hydroxyurea (HU) is an antitumor agent which also induces hemoglobinization during erythroid differentiation. 1 Hydroxyurea Hydroxyurea PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 antitumor antitumor ADJ JJ Degree=Pos _ _ _ _ 8 agent agent NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 hemoglobinization hemoglobinization NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2997 # text = In addition, HU stimulates the synthesis of fetal hemoglobin in sickle cell anemia patients. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HU Hu PRON PRP Case=Nom|Person=2|PronType=Prs _ _ _ _ 5 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 10 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 anemia anemia ADP IN _ _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2998 # text = To further understand its mechanism of action, we investigated the effects of HU on regulation of c-jun expression prior to the onset of erythroid differentiation of K562 cells. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HU Hu PRON PRP Case=Acc|Person=2|PronType=Prs _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 prior prior ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 onset onset NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 K562 K562 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2999 # text = HU induced a dose-dependent stimulation of c-jun synthesis. 1 HU Hu PRON PRP Case=Nom|Person=2|PronType=Prs _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3000 # text = The levels of c-jun mRNA was elevated 4 to 7.5-fold by HU within 2 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 4 4 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 7.5 7.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 HU Hu PROPN NNP Number=Sing _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3001 # text = This was followed by a gradual decline to the basal level by 24 h. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 gradual gradual ADJ JJ Degree=Pos _ _ _ _ 7 decline decline NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 24 24 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3002 # text = Both nuclear run-on and actinomycin D pulse experiments strongly indicate that HU regulates c-jun mRNA expression by increasing the rate of synthesis as well as stabilizing the c-jun mRNA. 1 Both both DET DT _ _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 on on ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 actinomycin actinomycin ADJ JJ Degree=Pos _ _ _ _ 8 D D NOUN NN Number=Sing _ _ _ _ 9 pulse pulse NOUN NN Number=Sing _ _ _ _ 10 experiments experiment NOUN NNS Number=Plur _ _ _ _ 11 strongly strongly ADV RB _ _ _ _ _ 12 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 HU Hu PROPN NNP Number=Sing _ _ _ _ 15 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 c- c- PUNCT , _ _ _ _ SpaceAfter=No 17 jun jun VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 rate rate NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 as as ADV RB _ _ _ _ _ 27 well well ADV RB Degree=Pos _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 stabilizing stabilize VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 c- c- SYM NFP _ _ _ _ SpaceAfter=No 32 jun jun PROPN NNP Number=Sing _ _ _ _ 33 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3003 # text = In addition, the level of jun protein was elevated by 2 to 5-fold within 4 h in HU treated cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 jun jun NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 4 4 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HU Hu PROPN NNP Number=Sing _ _ _ _ 22 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3004 # text = Furthermore, concentrations of HU below 250 microM slightly increased the 5X AP-1/CAT activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HU Hu PROPN NNP Number=Sing _ _ _ _ 6 below below ADV RB _ _ _ _ _ 7 250 250 NUM CD NumType=Card _ _ _ _ 8 microM microm PROPN NNP Number=Sing _ _ _ _ 9 slightly slightly ADV RB _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5X 5X PROPN NNP Number=Sing _ _ _ _ 13 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 CAT cat ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3005 # text = These results strongly suggest that HU induces both transcriptional and post-transcription regulation of c-jun during erythroid differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 HU Hu PROPN NNP Number=Sing _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 post post X AFX _ _ _ _ SpaceAfter=No 12 -transcription -transcription NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3006 # text = Document 003001188 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001188 003001188 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3007 # text = Cross-linking of Fc gamma receptors activates HIV-1 long terminal repeat-driven transcription in human monocytes. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Fc Fc PROPN NNP Number=Sing _ _ _ _ 6 gamma gamma PROPN NNP Number=Sing _ _ _ _ 7 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 long long ADJ JJ Degree=Pos _ _ _ _ 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3008 # text = Elevation of the levels of circulating immune complexes frequently accompanies HIV-1 infection and is a prognostic indicator of clinical progression from asymptomatic infection to AIDS. 1 Elevation Elevation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of SCONJ IN _ _ _ _ _ 6 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 7 immune immune PRON NN Number=Sing _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 frequently frequently ADV RB _ _ _ _ _ 10 accompanies accompany NOUN NNS Number=Plur _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 prognostic prognostic ADJ JJ Degree=Pos _ _ _ _ 19 indicator indicator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 22 progression progression NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 AIDS Aid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3009 # text = Here we report that cross-linking of Fc gamma RI or Fc gamma RII by adherent human IgG or by specific anti-Fc gamma R mAb activates HIV-1 gene expression in the human monocytic cell line BF24 and increased HIV RNA expression in monocytes from HIV infected patients as assayed by reverse transcription-PCR. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linking -link NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Fc Fc PROPN NNP Number=Sing _ _ _ _ 9 gamma gamma PROPN NNP Number=Sing _ _ _ _ 10 RI RI PROPN NNP Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 Fc Fc PROPN NNP Number=Sing _ _ _ _ 13 gamma gamma PROPN NNP Number=Sing _ _ _ _ 14 RII RII PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 IgG Igg NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 anti anti X AFX _ _ _ _ SpaceAfter=No 23 -Fc -Fc X GW _ _ _ _ _ 24 gamma gamma X GW _ _ _ _ _ 25 R R X GW _ _ _ _ _ 26 mAb mAb X GW _ _ _ _ _ 27 activates activate X GW _ _ _ _ _ 28 HIV HIV X GW _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 line line NOUN NN Number=Sing _ _ _ _ 39 BF24 BF24 NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ _ 43 RNA RNA PROPN NNP Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 47 from from ADP IN _ _ _ _ _ 48 HIV haHive PROPN NNP Number=Sing _ _ _ _ 49 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 patients patient NOUN NNS Number=Plur _ _ _ _ 51 as as SCONJ IN _ _ _ _ _ 52 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 reverse reverse NOUN NN Number=Sing _ _ _ _ 55 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3010 # text = In THP-1 cells, Fc gamma R cross-linking induced NF-kappa B, which is known to bind to the regulatory region of the long terminal repeat (LTR) of HIV-1 and to activate HIV-1 transcription. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Fc Fc PROPN NNP Number=Sing _ _ _ _ 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 R R PROPN NNP Number=Sing _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 bind bind VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 long long ADJ JJ Degree=Pos _ _ _ _ 30 terminal terminal NOUN NN Number=Sing _ _ _ _ 31 repeat repeat NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 activate activate VERB VB VerbForm=Inf _ _ _ _ 42 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3011 # text = Anti-TNF-alpha antibody but not anti-IL-1 beta antibody strongly inhibited both the induction of HIV-1-LTR-driven transcription and the induction of NF-kappa B by Fc gamma R cross-linking. 1 Anti-TNF Anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 antibody antibody NOUN NN Number=Sing _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 anti-IL anti-il ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 antibody antibody PRON NN Number=Sing _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 Fc Fc PROPN NNP Number=Sing _ _ _ _ 36 gamma gamma PROPN NNP Number=Sing _ _ _ _ 37 R R PROPN NNP Number=Sing _ _ _ _ 38 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3012 # text = These results indicate that Fc gamma R can mediate a TNF-alpha-dependent induction of HIV-1 gene transcription and suggest that immune complexes may contribute to the pathophysiology of HIV-1 infection by augmenting viral replication in monocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Fc Fc PROPN NNP Number=Sing _ _ _ _ 6 gamma gamma PROPN NNP Number=Sing _ _ _ _ 7 R be PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 immune immune ADJ JJ Degree=Pos _ _ _ _ 27 complexes complexe NOUN NNS Number=Plur _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 infection infection NOUN NN Number=Sing _ _ _ _ 38 by by SCONJ IN _ _ _ _ _ 39 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 40 viral viral ADJ JJ Degree=Pos _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3013 # text = Document 003001189 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001189 003001189 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3014 # text = Adherence-dependent increase in human monocyte PDGF(B) mRNA is associated with increases in c-fos, c-jun, and EGR2 mRNA. 1 Adherence Adherence ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 increases increase NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 EGR2 EGR2 NUM CD NumType=Card _ _ _ _ 26 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3015 # text = Adherence is an important initial step in the transition of a circulating monocyte to a tissue macrophage. 1 Adherence Adherence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 initial initial ADJ JJ Degree=Pos _ _ _ _ 6 step step NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transition transition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 tissue tissue NOUN NN Number=Sing _ _ _ _ 17 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3016 # text = This differentiation is accompanied by an augmented capacity to generate growth factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 capacity capacity NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 generate generate VERB VB VerbForm=Inf _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3017 # text = We hypothesized that adherence itself might be an important trigger for a sequence of gene activation culminating in cells with increased mRNA encoding profibrotic growth factors such as platelet-derived growth factor B subunit (PDGF[B]) and transforming growth factor-beta (TGF-beta). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 adherence adherence NOUN NN Number=Sing _ _ _ _ 5 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 trigger trigger NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 culminating culminat VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 24 profibrotic profibrotic ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 subunit subunit NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 44 growth growth NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 -beta -beta NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3018 # text = After in vitro adherence, human monocytes had a biphasic increase in PDGF(B) mRNA with peaks at 6 h and 13 d. 1 After after ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 peaks peak NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 6 6 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 13 13 NUM CD NumType=Card _ _ _ _ 25 d would NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3019 # text = No increase in TGF-beta mRNA was observed. 1 No no DET DT _ _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 beta beta PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3020 # text = The 6-h increase in PDGF(B) mRNA was adherence dependent, and in addition, was abrogated when the cytoskeletal integrity was compromised by cytochalasin D. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 h h NOUN NN Number=Sing _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 adherence adherence NOUN NN Number=Sing _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 when when ADV WRB PronType=Int _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 25 integrity integrity NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 compromised compromise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 cytochalasin cytochalasin PROPN NNP Number=Sing _ _ _ _ 30 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3021 # text = The 6-h increase in PDGF(B) mRNA was unaltered by adherence in the presence of the monocyte stimulus lipopolysaccharide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 h h NOUN NN Number=Sing _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 unaltered unalter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 adherence adherence NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 23 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3022 # text = Adherence to either fibronectin or collagen-coated plastic had little consistent effect on PDGF(B) mRNA accumulation. 1 Adherence Adherence VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 either either CCONJ CC _ _ _ _ _ 4 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 collagen collagen VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 coated coate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 plastic plastic NOUN NN Number=Sing _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 little little ADJ JJ Degree=Pos _ _ _ _ 12 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 20 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3023 # text = The increased PDGF(B) mRNA observed in adherent monocytes was accompanied by increases in mRNAs of the early growth response genes c-fos (maximal at 20 min), c-jun, and EGR2 (maximal at 6-24 h). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increases increase NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 c- c- PUNCT : _ _ _ _ SpaceAfter=No 25 fos fo NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 20 20 NUM CD NumType=Card _ _ _ _ 30 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 c- c- SYM NFP _ _ _ _ SpaceAfter=No 34 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 EGR2 Egr2 NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 40 at at ADP IN _ _ _ _ _ 41 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 24 24 NUM CD NumType=Card _ _ _ _ 44 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3024 # text = The increase in c-jun and EGR2, but not c-fos, mRNA was also abrogated by cytochalasin D. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 c- c- PUNCT : _ _ _ _ SpaceAfter=No 12 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 cytochalasin cytochalasin PROPN NNP Number=Sing _ _ _ _ 20 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3025 # text = These observations suggest that adherence results in increases of c-fos, c-jun, EGR2, and PDGF(B) mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 adherence adherence NOUN NN Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 increases increase NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3026 # text = In addition, the increases in c-jun, EGR2, and PDGF(B) may depend on cytoskeletal rearrangement. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increases increase NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 depend depend VERB VB VerbForm=Inf _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 21 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3027 # text = Modulation of these events at the time of adherence offers a mechanism by which differential priming of the cells may be accomplished. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 time time NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 adherence adherence NOUN NN Number=Sing _ _ _ _ 10 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 differential differential ADJ JJ Degree=Pos _ _ _ _ 16 priming priming NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 accomplished accomplish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3028 # text = Document 003001190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001190 003001190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3029 # text = NF-kappaB-mediated up-regulation of Bcl-x and Bfl-1/A1 is required for CD40 survival signaling in B lymphocytes. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB- kappaB- SYM NFP _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 up up ADP RP _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 x x PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -1/A1 -1/A1 PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 CD40 CD40 NUM CD NumType=Card _ _ _ _ 19 survival survival NOUN NN Number=Sing _ _ _ _ 20 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3030 # text = Activation of CD40 is essential for thymus-dependent humoral immune responses and rescuing B cells from apoptosis. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 thymus thymus ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 humoral humoral ADJ JJ Degree=Pos _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 rescuing rescue VERB VBG VerbForm=Ger _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3031 # text = Many of the effects of CD40 are believed to be achieved through altered gene expression. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3032 # text = In addition to Bcl-x, a known CD40-regulated antiapoptotic molecule, we identified a related antiapoptotic molecule, A1/Bfl-1, as a CD40-inducible gene. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 x x SYM SYM _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 A1/ A1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3033 # text = Inhibition of the NF-kappaB pathway by overexpression of a dominant-active inhibitor of NF-kappaB abolished CD40-induced up-regulation of both the Bfl-1 and Bcl-x genes and also eliminated the ability of CD40 to rescue Fas-induced cell death. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 up up ADP IN _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 x x NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 also also ADV RB _ _ _ _ _ 38 eliminated eliminate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 ability ability NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 rescue rescue VERB VB VerbForm=Inf _ _ _ _ 45 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3034 # text = Within the upstream promoter region of Bcl-x, a potential NF-kappaB-binding sequence was found to support NF-kappaB-dependent transcriptional activation. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 x x NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 support support VERB VB VerbForm=Inf _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3035 # text = Furthermore, expression of physiological levels of Bcl-x protected B cells from Fas-mediated apoptosis in the absence of NF-kappaB signaling. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 x x SYM SYM _ _ _ _ _ 11 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 absence absence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3036 # text = Thus, our results suggest that CD40-mediated cell survival proceeds through NF-kappaB-dependent up-regulation of Bcl-2 family members. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 survival survival NOUN NN Number=Sing _ _ _ _ 12 proceeds proceed NOUN NNS Number=Plur _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3037 # text = Document 003001191 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001191 003001191 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3038 # text = Regulation of low shear flow-induced HAEC VCAM-1 expression and monocyte adhesion. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 shear shear NOUN NN Number=Sing _ _ _ _ 5 flow flow NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 HAEC Haec PROPN NNP Number=Sing _ _ _ _ 9 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3039 # text = We recently reported that prolonged exposure of human aortic endothelial cells (HAEC) to low shear stress flow patterns is associated with a sustained increase in the activated form of the transcriptional regulator nuclear factor-kappaB (NF-kappaB). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 prolonged prolonge ADJ JJ Degree=Pos _ _ _ _ 6 exposure exposure NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 HAEC HAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 shear shear NOUN NN Number=Sing _ _ _ _ 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 flow flow NOUN NN Number=Sing _ _ _ _ 20 patterns pattern NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 form form NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 regulator regulator NOUN NN Number=Sing _ _ _ _ 35 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3040 # text = Here we investigate the hypothesis that low shear-induced activation of NF-kappaB is responsible for enhanced expression of vascular cell adhesion molecule (VCAM-1) resulting in augmented endothelial cell-monocyte (EC-Mn) adhesion and that this activation is dependent on intracellular oxidant activity. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 molecule molecule NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 augmented augment ADJ JJ Degree=Pos _ _ _ _ 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 that that SCONJ IN _ _ _ _ _ 46 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 52 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3041 # text = Before exposure to low shear (2 dyn/cm2) for 6 h, HAEC were preincubated with or without the antioxidants pyrrolidine dithiocarbamate (PDTC) or N-acetyl-L-cysteine (NAC). 1 Before before ADP IN _ _ _ _ _ 2 exposure exposure NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 shear shear NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 dyn/ dyn/ SYM SYM _ _ _ _ SpaceAfter=No 9 cm2 cm2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 6 6 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 HAEC Haec NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 without without ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 23 pyrrolidine pyrrolidine PRON PRP _ _ _ _ _ 24 dithiocarbamate dithiocarbamate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 N- N- SYM NFP _ _ _ _ SpaceAfter=No 30 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 -L- -l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3042 # text = PDTC strongly inhibited low shear-induced activation of NF-kappaB, expression of VCAM-1, and EC-Mn adhesion. 1 PDTC Pdtc PROPN NNP Number=Sing _ _ _ _ 2 strongly strongly ADV RB _ _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Mn Mn PROPN NNP Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3043 # text = Paradoxically, NAC exerted a positive effect on low shear-induced VCAM-1 expression and EC-Mn adhesion and only slightly downregulated NF-kappaB activation. 1 Paradoxically paradoxically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NAC NAC PROPN NNP Number=Sing _ _ _ _ 4 exerted exert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ _ 10 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Mn Mn PROPN NNP Number=Sing _ _ _ _ 21 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 slightly slightly ADV RB _ _ _ _ _ 25 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3044 # text = However, cytokine-induced NF-kappaB activation and VCAM-1 expression are blocked by both PDTC and NAC. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3045 # text = These data suggest that NF-kappaB plays a key role in low shear-induced VCAM-1 expression and that pathways mediating low shear- and cytokine-induced EC-Mn adhesion may be differentially regulated. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 key key ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 25 low low ADJ JJ Degree=Pos _ _ _ _ 26 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Mn Mn PROPN NNP Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 may may AUX MD VerbForm=Fin _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 differentially differentially ADV RB _ _ _ _ _ 39 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3046 # text = Document 003001192 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001192 003001192 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3047 # text = The small GTP-binding protein Rho potentiates AP-1 transcription in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 GTP- Gtp- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 Rho Rho PROPN NNP Number=Sing _ _ _ _ 7 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3048 # text = The Rho family of small GTP-binding proteins is involved in the regulation of cytoskeletal structure, gene transcription, specific cell fate development, and transformation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Rho Rho PROPN NNP Number=Sing _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 GTP- Gtp- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 fate fate NOUN NN Number=Sing _ _ _ _ 24 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3049 # text = We demonstrate in this report that overexpression of an activated form of Rho enhances AP-1 activity in Jurkat T cells in the presence of phorbol myristate acetate (PMA), but activated Rho (V14Rho) has little or no effect on NFAT, Oct-1, and NF-kappaB enhancer element activities under similar conditions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 form form NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Rho Rho PROPN NNP Number=Sing _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 presence presence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 acetate acetate NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 Rho Rho PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 Rho Rho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 little little ADJ JJ Degree=Pos _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 no no DET DT _ _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ _ 46 on on ADP IN _ _ _ _ _ 47 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 56 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 57 element element NOUN NN Number=Sing _ _ _ _ 58 activities activity NOUN NNS Number=Plur _ _ _ _ 59 under under ADP IN _ _ _ _ _ 60 similar similar ADJ JJ Degree=Pos _ _ _ _ 61 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3050 # text = Overexpression of a V14Rho construct incapable of membrane localization (CAAX deleted) abolishes PMA-induced AP-1 transcriptional activation. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 Rho Rho PROPN NNP Number=Sing _ _ _ _ 6 construct construct VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 incapable incapable ADJ JJ Degree=Pos _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 localization localization NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CAAX CAAX NOUN NN Number=Sing _ _ _ _ 13 deleted delete VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3051 # text = The effect of Rho on AP-1 is independent of the mitogen-activated protein kinase pathway, as a dominant-negative MEK and a MEK inhibitor (PD98059) did not affect Rho-induced AP-1 activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Rho Rho PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 MEK Mek PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 MEK Mek PROPN NNP Number=Sing _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 affect affect VERB VB VerbForm=Inf _ _ _ _ 36 Rho Rho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3052 # text = V14Rho binds strongly to protein kinase Calpha (PKCalpha) in vivo; however, deletion of the CAAX site on V14Rho severely diminished this association. 1 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 Rho Rho PROPN NNP Number=Sing _ _ _ _ 3 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 protein protein VERB VB VerbForm=Inf _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 Calpha Calpha PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 however however ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 deletion deletion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CAAX CAAX PROPN NNP Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 Rho Rho PROPN NNP Number=Sing _ _ _ _ 25 severely severely ADV RB _ _ _ _ _ 26 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3053 # text = Evidence for a role for PKCalpha as an effector of Rho was obtained by the observation that coexpression of the N-terminal domain of PKCalpha blocked the effects of activated Rho plus PMA on AP-1 transcriptional activity. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 effector effector NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Rho Rho PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 observation observation NOUN NN Number=Sing _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 N- N- SYM SYM _ _ _ _ SpaceAfter=No 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ _ 26 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 Rho Rho PROPN NNP Number=Sing _ _ _ _ 32 plus plus CCONJ CC _ _ _ _ _ 33 PMA PMA PROPN NNP Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3054 # text = These data suggest that Rho potentiates AP-1 transcription during T-cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rho Rho PRON WP PronType=Int _ _ _ _ 6 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3055 # text = Document 003001193 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001193 003001193 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3056 # text = Fibrinogen activates NF-kappa B transcription factors in mononuclear phagocytes. 1 Fibrinogen Fibrinogen PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3057 # text = Adhesion to extracellular matrices is known to modulate leukocyte activation, although the mechanisms are not fully understood. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 4 matrices matrice NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 9 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 although although SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 fully fully ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3058 # text = Mononuclear phagocytes are exposed to fibrinous provisional matrix throughout migration into inflammatory foci, so this study was undertaken to determine whether fibrinogen triggers activation of NF-kappa B transcription factors. 1 Mononuclear Mononuclear ADJ JJ Degree=Pos _ _ _ _ 2 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 fibrinous fibrinous VERB VB VerbForm=Inf _ _ _ _ 7 provisional provisional ADJ JJ Degree=Pos _ _ _ _ 8 matrix matrix NOUN NN Number=Sing _ _ _ _ 9 throughout throughout ADP IN _ _ _ _ _ 10 migration migration NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 foci foci NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 so so ADV RB _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 study study NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 undertaken undertake ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 determine determine VERB VB VerbForm=Inf _ _ _ _ 22 whether whether SCONJ IN _ _ _ _ _ 23 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 24 triggers trigger NOUN NNS Number=Plur _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3059 # text = U937 cells differentiated with PMA in nonadherent culture were shown to express two fibrinogen-binding integrins, predominately CD11b/CD18, and to a lesser extent, CD11c/CD18. Cells stimulated with fibrinogen (10-100 microg/ml)/Mn2+ (50 microM) for 2 h were examined by electrophoretic mobility shift assay. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PMA Pma PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nonadherent nonadherent ADJ JJ Degree=Pos _ _ _ _ 8 culture culture NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 express express VERB VB VerbForm=Inf _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 predominately predominately ADV RB _ _ _ _ _ 20 CD11b/CD18 CD11b/CD18 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 26 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD11c/CD18 CD11c/CD18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 Cells cells PROPN NNPS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 100 100 NUM CD NumType=Card _ _ _ _ 38 microg/ml)/Mn2+ microg/ml)/mn2+ NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 50 50 NUM CD NumType=Card _ _ _ _ 41 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 2 2 NUM CD NumType=Card _ _ _ _ 45 h h NOUN NN Number=Sing _ _ _ _ 46 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 50 mobility mobility NOUN NN Number=Sing _ _ _ _ 51 shift shift NOUN NN Number=Sing _ _ _ _ 52 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3060 # text = NF-kappa B activation, minimal in unstimulated cells, was substantially up-regulated by fibrinogen. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 substantially substantially ADV RB _ _ _ _ _ 14 up up ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3061 # text = Fibrinogen also caused activation of AP-1, but not SP1 or cAMP response element-binding protein (CREB) factors. 1 Fibrinogen Fibrinogen PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 SP1 SP1 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CREB CREB NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3062 # text = Blocking mAbs against CD18 and CD11b abrogated fibrinogen-induced NF-kappa B activation. 1 Blocking Blocke VERB VBG VerbForm=Ger _ _ _ _ 2 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 3 against against ADP IN _ _ _ _ _ 4 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 18 18 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CD11 CD11 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 b b NOUN NN Number=Sing _ _ _ _ 9 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 fibrinogen fibrinogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3063 # text = To determine the effects on transcriptional regulation, U937 cells were transfected with a plasmid containing the HIV-1 enhancer (bearing two NF-kappa B sites) coupled to a chloramphenicol acetyltransferase (CAT) reporter. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 35 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3064 # text = Cells were subsequently stimulated with 1) PMA for 24 h, inducing CAT activity by 2.6-fold, 2) fibrinogen/Mn2+ for 2 h, inducing CAT activity by 3.2-fold, or 3) costimulation with fibrinogen and PMA, inducing 5.7-fold the CAT activity induced by PMA alone. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 subsequently subsequently ADV RB _ _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 PMA Pma NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 24 24 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 14 CAT cat ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 2.6 2.6 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 Mn2 Mn2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ _ 29 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 32 CAT cat ADJ JJ Degree=Pos _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 3.2 3.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 3 3 X LS _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 49 5.7 5.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 fold fold VERB VB VerbForm=Inf _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 CAT cat PROPN NNP Number=Sing _ _ _ _ 54 activity activity NOUN NN Number=Sing _ _ _ _ 55 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 by by ADP IN _ _ _ _ _ 57 PMA PMA PROPN NNP Number=Sing _ _ _ _ 58 alone alone ADV RB _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3065 # text = We conclude that contact with fibrinogen-derived proteins may contribute to mononuclear phagocyte activation by signaling through CD11b/CD18, resulting in selective activation of transcriptional regulatory factors, including NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 contact contact NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 fibrinogen fibrinogen NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 mononuclear mononuclear VERB VB VerbForm=Inf _ _ _ _ 14 phagocyte phagocyte NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 CD11b/CD18 CD11b/CD18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3066 # text = Document 003001194 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001194 003001194 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3067 # text = Alteration of a single serine in the basic domain of the Epstein-Barr virus ZEBRA protein separates its functions of transcriptional activation and disruption of latency. 1 Alteration Alteration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 single single ADJ JJ Degree=Pos _ _ _ _ 5 serine serine NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 basic basic ADJ JJ Degree=Pos _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Barr Barr PROPN NNP Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 separates separate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 functions function NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 disruption disruption NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3068 # text = The ZEBRA protein from Epstein-Barr virus (EBV) activates a switch from the latent to the lytic expression program of the virus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Barr Barr PROPN NNP Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 switch switch NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 latent latent NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 program program NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3069 # text = ZEBRA, a member of the bZIP family of DNA-binding proteins, is a transcriptional activator capable of inducing expression from viral lytic cycle promoters. 1 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 bZIP bZIP PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3070 # text = It had previously been thought that ZEBRA's capacity to disrupt EBV latency resided primarily in its ability to activate transcription of genes that encode products required for lytic replication. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ _ 13 latency latency NOUN NN Number=Sing _ _ _ _ 14 resided reside VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 primarily primarily ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3071 # text = We generated a point mutant of ZEBRA, Z(S186A), that was not impaired in its ability to activate transcription; however, this mutation abolished its ability to initiate the viral lytic cascade. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 point point NOUN NN Number=Sing _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 S s PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 186A 186A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 mutation mutation NOUN NN Number=Sing _ _ _ _ 30 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 ability ability NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 viral viral ADJ JJ Degree=Pos _ _ _ _ 37 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 38 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3072 # text = The mutant, containing a serine-to-alanine substitution in the DNA-binding domain of the protein, bound to several known ZEBRA-binding sites and activated transcription from reporters bearing known ZEBRA-responsive promoters but did not disrupt latency in EBV-infected cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 to to ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alanine alanine NOUN NN Number=Sing _ _ _ _ 11 substitution substitution NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 bound bound ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 ZEBRA zebra NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 reporters reporter NOUN NNS Number=Plur _ _ _ _ 35 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 36 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 45 latency latency NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3073 # text = Therefore, initiation of the EBV lytic cycle by the ZEBRA protein requires a function in addition to transcriptional activation; a change of serine 186 to alanine in the DNA-binding domain of ZEBRA abolished this additional function and uncovered a new role for the ZEBRA protein in disruption of EBV latency. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 initiation initiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 EBV EBV PROPN NNP Number=Sing _ _ _ _ 7 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 8 cycle cycle NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 change change NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 serine serine NOUN NN Number=Sing _ _ _ _ 26 186 186 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 alanine alanine NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 37 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 39 additional additional ADJ JJ Degree=Pos _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 uncovered uncover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 new new ADJ JJ Degree=Pos _ _ _ _ 45 role role NOUN NN Number=Sing _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 49 protein protein NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 disruption disruption NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 EBV EBV PROPN NNP Number=Sing _ _ _ _ 54 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 3074 # text = The additional function that is required for initiation of the lytic viral life cycle is likely to require phosphorylation of serine 186 of the ZEBRA protein, which may influence either DNA recognition or transcriptional activation of lytic viral promoters in a chromatinized viral episome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 initiation initiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 12 viral viral ADJ JJ Degree=Pos _ _ _ _ 13 life life NOUN NN Number=Sing _ _ _ _ 14 cycle cycle NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 require require VERB VB VerbForm=Inf _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 serine serine NOUN NN Number=Sing _ _ _ _ 22 186 186 NUM CD NumType=Card _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 influence influence VERB VB VerbForm=Inf _ _ _ _ 31 either either CCONJ CC _ _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 recognition recognition NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 chromatinized chromatinize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 viral viral ADJ JJ Degree=Pos _ _ _ _ 45 episome episome NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3075 # text = Document 003001195 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001195 003001195 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3076 # text = Erythropoietin-dependent induction of hemoglobin synthesis in a cytokine-dependent cell line M-TAT. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hemoglobin hemoglobin ADJ JJ Degree=Pos _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 M- M- PUNCT : _ _ _ _ SpaceAfter=No 16 TAT TAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3077 # text = M-TAT is a cytokine-dependent cell line with the potential to differentiate along the erythroid and megakaryocytic lineages. 1 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 TAT Tat NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 potential potential NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3078 # text = We cultured M-TAT cells long term (> 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 TAT Tat NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 term term NOUN NN Number=Sing _ _ _ _ 9 (> (> PUNCT -RRB- _ _ _ _ _ # sent_id = 3079 # text = 1 year) in the continuous presence of erythropoietin (EPO), granulocyte-macrophage colony-stimulating factor (GM-CSF), or stem cell factor (SCF). 1 1 1 NUM CD NumType=Card _ _ _ _ 2 year year NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 erythropoietin erythropoietin PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 17 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 stem stem NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 SCF SCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3080 # text = These long term cultures are referred to as M-TAT/EPO, M-TAT/GM-CSF, and M-TAT/SCF cells, respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 term term NOUN NN Number=Sing _ _ _ _ 4 cultures culture NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 referred refer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 M- M- SYM NFP _ _ _ _ SpaceAfter=No 15 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 TAT Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 SCF Scf NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3081 # text = Hemoglobin concentration and gamma-globin and erythroid delta-aminolevulinate synthase mRNA levels were significantly higher in M-TAT/EPO cells than in M-TAT/GM-CSF cells. 1 Hemoglobin Hemoglobin ADP IN _ _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 delta- delta- PUNCT , _ _ _ _ SpaceAfter=No 10 aminolevulinate aminolevulinate ADJ JJ Degree=Pos _ _ _ _ 11 synthase synthase NOUN NN Number=Sing _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 EPO EPO PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3082 # text = When the supplemented cytokine was switched from GM-CSF to EPO, hemoglobin synthesis in M-TAT/GM-CSF cells increased rapidly (within 5 h), and the level of GATA-1 mRNA increased. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 switched switch VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 hemoglobin hemoglobin ADP IN _ _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 CSF CSF PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 rapidly rapidly ADV RB _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 within within ADP IN _ _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ _ 27 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 38 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3083 # text = In contrast, the addition of GM-CSF to the M-TAT/EPO cell culture decreased the amount of hemoglobin, even in the presence of EPO, indicating that the EPO signal for erythroid differentiation is suppressed by GM-CSF. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 addition addition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 M- m- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 EPO EPO PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ _ 18 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 amount amount NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 EPO EPO PROPN NNP Number=Sing _ _ _ _ 35 signal signal NOUN NN Number=Sing _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3084 # text = Thus, erythroid development of M-TAT cells is promoted by EPO and suppressed by GM-CSF. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 TAT Tat NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 EPO EPO PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3085 # text = These results support the hypothesis that EPO actively influences the programming of gene expression required for erythroid progenitor cell differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 EPO EPO PROPN NNP Number=Sing _ _ _ _ 8 actively actively ADV RB _ _ _ _ _ 9 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 programming programming NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3086 # text = Document 003001196 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001196 003001196 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3087 # text = Transcription factor NF-kappaB regulation of renal fibrosis during ureteral obstruction. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 renal renal ADJ JJ Degree=Pos _ _ _ _ 9 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 ureteral ureteral ADJ JJ Degree=Pos _ _ _ _ 12 obstruction obstruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3088 # text = Irrespective of the etiology, many kidney diseases result in inflammation and fibrosis of the tubulointerstitium, with the subsequent loss of renal function. 1 Irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 etiology etiology NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 kidney kidney NOUN NN Number=Sing _ _ _ _ 8 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 9 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 tubulointerstitium tubulointerstitium NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 21 loss loss NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 renal renal ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3089 # text = To initiate any disease process or for any disease process to progress, there must be changes in the transcription of genes within the affected tissue. 1 To to PART TO _ _ _ _ _ 2 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 disease disease NOUN NN Number=Sing _ _ _ _ 5 process process NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 any any DET DT _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ _ 10 process process NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 progress progress VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 there there PRON EX _ _ _ _ _ 15 must must AUX MD VerbForm=Fin _ _ _ _ 16 be be VERB VB VerbForm=Inf _ _ _ _ 17 changes change NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3090 # text = The nuclear factor-kappa B (NF-kappaB) family of transcription factors regulates genes involved in inflammation, cell proliferation, and cell differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3091 # text = This review discusses the NF-kappaB transcription factor family in general and the association of NF-kappaB activation with cellular/molecular events of renal inflammation and fibrosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 review review NOUN NN Number=Sing _ _ _ _ 3 discusses discuss VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 general general ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 25 events event NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 renal renal ADJ JJ Degree=Pos _ _ _ _ 28 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 fibrosis fibrosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3092 # text = Document 003001197 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001197 003001197 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3093 # text = Regulation of transcription of the human erythropoietin receptor gene by proteins binding to GATA-1 and Sp1 motifs. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3094 # text = Erythropoietin (Epo), the primary regulator of the production of erythroid cells, acts by binding to a cell surface receptor (EpoR) on erythroid progenitors. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 29 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3095 # text = We used deletion analysis and transfection assays with reporter gene constructs to examine the transcription control elements in the 5' flanking region of the human EpoR gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ _ 7 assays assay NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 constructs construct NOUN NNS Number=Plur _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 examine examine VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 EpoR Epor NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3096 # text = In erythroid cells most of the transcription activity was contained in a 150 bp promoter fragment with binding sites for transcription factors AP2, Sp1 and the erythroid-specific GATA-1. 1 In in ADP IN _ _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 most most ADJ JJS Degree=Sup _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 150 150 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 fragment fragment NOUN NN Number=Sing _ _ _ _ 17 with with SCONJ IN _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 AP2 AP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3097 # text = The 150 bp hEpoR promoter exhibited high and low activity in erythroid OCIM1 and K562 cells, respectively, reflecting the high and low levels of constitutive hEpoR expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 150 150 NUM CD NumType=Card _ _ _ _ 3 bp bp NOUN NN Number=Sing _ _ _ _ 4 hEpoR hepor CCONJ CC _ _ _ _ _ 5 promoter promoter ADV RB _ _ _ _ _ 6 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 erythroid erythroid PROPN NNP Number=Sing _ _ _ _ 13 OCIM1 OCIM1 PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 K562 K562 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 28 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3098 # text = The GATA-1 and Sp1 binding sites in this promoter lacking a TATA sequence were necessary for a high level of transcription activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 TATA TATa PROPN NNP Number=Sing _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3099 # text = Protein-DNA binding studies suggested that Sp1 and two other CCGCCC binding proteins from erythroid and non-erythroid cells could bind to the Sp1 binding motif. 1 Protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 CCGCCC Ccgccc NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 could could AUX MD VerbForm=Fin _ _ _ _ 21 bind bind VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3100 # text = By increasing GATA-1 levels via co-transfection, we were able to transactivate the hEpoR promoter in K562 cells and non-erythroid cells, but not in the highly active OCIM1 cells, although GATA-1 mRNA levels were comparable in OCIM1 and K562. 1 By by SCONJ IN _ _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 via via ADP IN _ _ _ _ _ 8 co-transfection co-transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 K562 K562 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 highly highly ADV RB _ _ _ _ _ 30 active active ADJ JJ Degree=Pos _ _ _ _ 31 OCIM1 Ocim1 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 although although SCONJ IN _ _ _ _ _ 35 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 OCIM1 Ocim1 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 K562 k562 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3101 # text = Interestingly, when we mutated the Sp1 site, resulting in a marked decrease in hEpoR promoter activity, we could restore transactivation by increasing GATA-1 levels in OCIM1 cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 mutated mutate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 resulting result VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 decrease decrease NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 hEpoR hepor ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 could could AUX MD VerbForm=Fin _ _ _ _ 22 restore restore VERB VB VerbForm=Inf _ _ _ _ 23 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 24 by by SCONJ IN _ _ _ _ _ 25 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 26 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 OCIM1 OCIM1 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3102 # text = These data suggest that while GATA-1 can transactivate the EpoR promoter, the level of hEpoR gene expression does not depend on GATA-1 alone. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 while while SCONJ IN _ _ _ _ _ 6 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EpoR EpoR PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 depend depend VERB VB VerbForm=Inf _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ _ 28 alone alone ADV RB _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3103 # text = Rather, hEpoR transcription activity depends on coordination between Sp1 and GATA-1 with other cell-specific factors, including possibly other Sp1-like binding proteins, to provide high level, tissue-specific expression. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hEpoR hepor CCONJ CC _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 coordination coordination NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 possibly possibly ADV RB _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 Sp1 Sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 like like SCONJ IN _ _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 provide provide VERB VB VerbForm=Inf _ _ _ _ 33 high high ADJ JJ Degree=Pos _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3104 # text = Document 003001198 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001198 003001198 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3105 # text = Alcohol-induced regulation of nuclear regulatory factor-kappa beta in human monocytes. 1 Alcohol alcohol INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3106 # text = Acute ethanol exposure has the capacity to modulate immune functions, particularly, to down regulate monocyte production of inflammatory cytokines. 1 Acute Acute ADV RB _ _ _ _ _ 2 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 3 exposure exposure NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 capacity capacity NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 particularly particularly ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 down down ADV RB _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3107 # text = However, the intracellular mechanisms for these effects of ethanol are yet to be understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ethanol ethanol NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 yet yet ADV RB _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3108 # text = Considering that nuclear regulatory factor-kappa beta (NF-kappa B)/Rel is a common regulatory element of the promoter region of the inflammatory cytokine genes, herein, we tested the hypothesis that acute ethanol affects NF-kappa B activation in human monocytes. 1 Considering consider VERB VBG VerbForm=Ger _ _ _ _ 2 that that SCONJ IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 Rel Rel PROPN NNP Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 common common ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 herein herein ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 35 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 acute acute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 41 affects affect NOUN NNS Number=Plur _ _ _ _ 42 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 human human ADJ JJ Degree=Pos _ _ _ _ 49 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3109 # text = Adherence-isolated monocytes showed constitutive DNA binding activity of NF-kappa B. 1 Adherence Adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3110 # text = A clinically relevant dose (25 mM) of acute ethanol treatment in vitro increased NF-kappa B binding activity in monocytes with a preferential induction of the inhibitory, p50/p50, NF-kappa B/Rel homodimer, and resulted in no induction of the p65/p50 heterodimer. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 clinically clinically ADV RB _ _ _ _ _ 3 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 25 25 NUM CD NumType=Card _ _ _ _ 7 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 binding binde VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 Rel Rel PROPN NNP Number=Sing _ _ _ _ 42 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 no no DET DT _ _ _ _ _ 48 induction induction NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 p65/ p65/ SYM SYM _ _ _ _ SpaceAfter=No 52 p50 p50 NUM CD NumType=Card _ _ _ _ 53 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3111 # text = In contrast, lipopolysaccharide stimulation primarily induced the p65/p50 heterodimer that has been shown to result in gene activation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 primarily primarily ADV RB _ _ _ _ _ 7 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ _ 12 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 result result VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3112 # text = Thus, such unique activation of the inhibitory p50/p50 homodimer by acute ethanol treatment may result in inhibition rather than activation of NF-kappa B-regulated inflammatory cytokine genes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 unique unique ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 9 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 result result VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3113 # text = Consequently, these results suggest that physiologically relevant concentrations of ethanol may affect production of inflammatory cytokines, such as tumor necrosis factor-alpha, interleukin-1 beta, and interleukin-6 by disrupting NF-kappa B signaling in monocytes. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 physiologically physiologically ADV RB _ _ _ _ _ 8 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 ethanol ethanol NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 by by SCONJ IN _ _ _ _ _ 36 disrupting disrupting VERB VBG VerbForm=Ger _ _ _ _ 37 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3114 # text = Document 003001199 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001199 003001199 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3115 # text = Signal transduction pathways triggered by the FcepsilonRIIb receptor (CD23) in human monocytes lead to nuclear factor-kappaB activation. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 FcepsilonRIIb FcepsilonRIIb PROPN NNP Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3116 # text = BACKGROUND: 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3117 # text = Alveolar macrophages play a key role in the initiation of the inflammatory reaction of allergic asthma. 1 Alveolar Alveolar ADJ JJ Degree=Pos _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 key key ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 initiation initiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 reaction reaction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 16 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3118 # text = Alveolar macrophages and peripheral blood monocytes are activated when IgE/allergen immune complexes bind to the CD23 receptor, which leads to the production of inflammatory cytokines. 1 Alveolar Alveolar ADJ JJ Degree=Pos _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 IgE Ige ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 allergen allergen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 immune immune PRON PRP _ _ _ _ _ 14 complexes complex NOUN NNS Number=Plur _ _ _ _ 15 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3119 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3120 # text = We sought to investigate the molecular mechanisms regulating this early inflammatory response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3121 # text = We have focused on the study of the signal transduction pathways triggered by CD23 in human monocytes and the promonocytic cell line U937. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signal signal ADJ JJ Degree=Pos _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ _ 12 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3122 # text = METHODS: CD23 was cross-linked in human monocytes and U937 cells with IgE immune complexes. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 cross cross ADV RB _ _ _ _ SpaceAfter=No 6 -linked -link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 IgE Ige PROPN NNP Number=Sing _ _ _ _ 15 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3123 # text = Surface expression of CD23 was determined by FACS analysis. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 FACS FACS ADJ JJ Degree=Pos _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3124 # text = Transcription factor activation and gene transcription were studied by gel-shift assays and Northern blot analysis, respectively. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 shift shift NOUN NN Number=Sing _ _ _ _ 13 assays assay NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 16 blot blot NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3125 # text = IkappaBalpha phosphorylation and degradation was analyzed by Western blot. 1 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 degradation degradation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Western western ADJ JJ Degree=Pos _ _ _ _ 9 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3126 # text = RESULTS: Nuclear factor (NF)-kappaB is the main transcription factor involved in the gene activation that follows CD23 cross-linking in monocytes. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 main main ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 follows follow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 23 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3127 # text = CD23-induced NF-kappaB is a heterodimer composed of p65/p50 subunits. 1 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 9 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p65/ p65/ SYM SYM _ _ _ _ SpaceAfter=No 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3128 # text = NF-kappaB nuclear translocation is secondary to the phosphorylation and subsequent degradation of the NF-kappaB inhibitory molecule IkappaBalpha. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 20 molecule molecule NOUN NN Number=Sing _ _ _ _ 21 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3129 # text = Tyrosine kinase-dependent, and not protein kinase C-dependent, pathways mediate CD23-triggered NF-kappaB activation but do not participate in the direct phosphorylation of IkappaBalpha. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 protein protein VERB VB VerbForm=Inf _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 participate participate VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 direct direct ADJ JJ Degree=Pos _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3130 # text = IkappaBalpha degradation and NF-kappaB nuclear translocation correlate with transcriptional activation of the inflammatory cytokines TNF-alpha and IL-1beta. 1 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 2 degradation degradation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 correlate correlate NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 17 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3131 # text = CONCLUSIONS: NF-kappaB is the main transcription factor involved in the signal transduction pathway of CD23 in monocytes. 1 CONCLUSIONS conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 main main ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3132 # text = Document 003001200 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001200 003001200 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3133 # text = Role of Egr-2 in up-regulation of Fas ligand in normal T cells and aberrant double-negative lpr and gld T cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Fas Fas PROPN NNP Number=Sing _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 19 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 negative negative ADJ JJ Degree=Pos _ _ _ _ 22 lpr lpr NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gld gld ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3134 # text = We previously identified a Fas ligand regulatory element (FLRE) in the Fas ligand (fasL) promoter that binds 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Fas Fas PROPN NNPS Number=Plur _ _ _ _ 6 ligand ligand NOUN NN Number=Sing _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FLRE FLRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Fas Fas PROPN NNPS Number=Plur _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 3135 # text = Egr family proteins and demonstrated that Egr-3 (PILOT) but not Egr-1 (NGFI-A, Krox-24, Tis-8, and Zif-268) induces transcription of fasL. 1 Egr Egr ADJ JJ Degree=Pos _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -3 -3 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PILOT Pilot NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 Egr Egr ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NGFI Ngfi NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Krox Krox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 24 24 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Tis tis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Zif Zif PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 268 268 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 induces induce NOUN NNS Number=Plur _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3136 # text = The aberrant CD4(-)CD8(-) 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aberrant aberrant NOUN NN Number=Sing _ _ _ _ 3 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 -) -) PUNCT . _ _ _ _ SpaceAfter=No 6 CD8 Cd8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 3137 # text = T cells from lpr/lpr and gld/gld mice, which have mutations in the genes encoding Fas and FasL, respectively, have an activated phenotype and constitutively express high levels of fasL mRNA, prompting us to ask what role if any the FLRE and Egr family proteins have in this aberrant expression of fasL. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 lpr/ lpr/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 lpr lpr NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 gld gld NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 gld gld NOUN NN Number=Sing _ _ _ _ 10 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mutations mutation NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 19 Fas Fa NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 FasL Fasl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 constitutively constitutively ADV RB _ _ _ _ _ 31 express express ADJ JJ Degree=Pos _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 fasL fasL PROPN NNP Number=Sing _ _ _ _ 36 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 prompting prompt VERB VBG VerbForm=Ger _ _ _ _ 39 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 ask ask VERB VB VerbForm=Inf _ _ _ _ 42 what what DET WDT PronType=Int _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 if if SCONJ IN _ _ _ _ _ 45 any any DET DT _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 FLRE Flre ADJ JJ Degree=Pos _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Egr Egr ADJ JJ Degree=Pos _ _ _ _ 50 family family NOUN NN Number=Sing _ _ _ _ 51 proteins protein NOUN NNS Number=Plur _ _ _ _ 52 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 55 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3138 # text = Unstimulated MRL-lpr/lpr and C3H-gld/gld CD4(-)CD8(-) 1 Unstimulated Unstimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 MRL Mrl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 lpr lpr NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 lpr lpr NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 C3H-gld/gld C3H-gld/gld PROPN NNP Number=Sing _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 11 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 3139 # text = T cells constitutively contained high levels of two proteins that bound to the FLRE. 1 T t NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 FLRE Flre NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3140 # text = Supershift analysis revealed these proteins to be Egr-1 and Egr-2 (Krox-20); Egr-3 was not detected. 1 Supershift Supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 analysis analysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -2 -2 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Krox Krox NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -3 -3 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3141 # text = Activation of normal lymph node cells resulted in increased expression of Egr-1, -2, and -3. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 lymph lymph NOUN NN Number=Sing _ _ _ _ 5 node node NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3142 # text = As with egr-3, expression of egr-2 was blocked by cyclosporin A. 1 As as ADP IN _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -2 -2 NUM CD NumType=Card _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3143 # text = Although overexpressed Egr-1 was ineffective, overexpressed Egr-2 was as potent as Egr-3 in inducing fasL promoter-dependent reporter constructs in T cell hybridomas and HeLa cells, and both up-regulated endogenous fasL mRNA in HeLa cells. 1 Although although SCONJ IN _ _ _ _ _ 2 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 overexpressed overexpress ADJ JJ Degree=Pos _ _ _ _ 9 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 potent potent NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -3 -3 NUM CD NumType=Card _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 20 fasL fasl ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 reporter reporter NOUN NN Number=Sing _ _ _ _ 25 constructs construct NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell PROPN NNP Number=Sing _ _ _ _ 29 hybridomas hybridoma PROPN NNPS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 both both ADV RB _ _ _ _ _ 36 up up ADV RB _ _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 40 fasL fasL PROPN NNP Number=Sing _ _ _ _ 41 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3144 # text = FasL-dependent reporter constructs in MRL-lpr/lpr and C3H-gld/gld CD4(-)CD8(-) 1 FasL Fasl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 MRL MRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lpr/lpr lpr/lpr NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 C3H-gld/ C3H-gld/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 gld gld NOUN NN Number=Sing _ _ _ _ 13 CD4 Cd4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 15 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 3145 # text = T cells were constitutively active, and this activity was largely prevented by mutation of the critical Egr family binding element. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 largely largely ADV RB _ _ _ _ _ 12 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 mutation mutation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 Egr Egr NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3146 # text = Thus, Egr-2, in addition to Egr-3, regulates FasL expression in activated normal T cells, and Egr-2 is likely to play a direct role in aberrant fasL up-regulation in lpr/lpr and gld/gld CD4(-)CD8(-) T cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 likely likely ADJ JJ Degree=Pos _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 direct direct ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 34 fasL fasL NOUN NN Number=Sing _ _ _ _ 35 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 lpr/lpr lpr/lpr NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 gld/gld gld/gld ADJ JJ Degree=Pos _ _ _ _ 42 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 44 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 -) -) PUNCT . _ _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3147 # text = Document 003001201 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001201 003001201 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3148 # text = Cortivazol mediated induction of glucocorticoid receptor messenger ribonucleic acid in wild-type and dexamethasone-resistant human leukemic (CEM) cells. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 messenger messenger ADV RBR _ _ _ _ _ 8 ribonucleic ribonucleic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 leukemic leukemic NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3149 # text = Cortivazol is a phenylpyrazolo glucocorticoid of high potency and unusual structure. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 phenylpyrazolo phenylpyrazolo NOUN NN Number=Sing _ _ _ _ 5 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 potency potency NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 11 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3150 # text = In both wild-type and highly dexamethasone(dex)-resistant clones of the human leukemic cell line CEM, exposure to cortivazol leads to cell death. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 highly highly ADV RB _ _ _ _ _ 8 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 dex dex NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 exposure exposure NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 cortivazol cortivazol VERB VB VerbForm=Inf _ _ _ _ 26 leads lead NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 cell cell VERB VB VerbForm=Inf _ _ _ _ 29 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3151 # text = It has been shown recently that in wild-type CEM cells but not in a dex-resistant, glucocorticoid receptor(GR)-defective clone ICR-27 TK-3, dex induces GR mRNA. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 recently recently ADV RB _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 type type NOUN NN Number=Sing _ _ _ _ 11 CEM CEM PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 dex dex NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -resistant -resistant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 defective defective ADJ JJ Degree=Pos _ _ _ _ 27 clone clone NOUN NN Number=Sing _ _ _ _ 28 ICR Icr NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 27 27 NUM CD NumType=Card _ _ _ _ 31 TK TK NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 dex dex NOUN NN Number=Sing _ _ _ _ 36 induces induce NOUN NNS Number=Plur _ _ _ _ 37 GR GR PROPN NNP Number=Sing _ _ _ _ 38 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3152 # text = To test the hypothesis that cortivazol acts in dex-resistant cells by making use of the residual GR found there, wild-type and dex-resistant clones were treated with various concentrations of cortivazol and induction of GR mRNA was studied. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 cortivazol cortivazol ADJ JJ Degree=Pos _ _ _ _ 7 acts act NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 making make VERB VBG VerbForm=Ger _ _ _ _ 13 use use NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 residual residual ADJ JJ Degree=Pos _ _ _ _ 17 GR Gr NOUN NN Number=Sing _ _ _ _ 18 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 there there ADV RB PronType=Dem _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 26 clones clone NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 various various ADJ JJ Degree=Pos _ _ _ _ 31 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cortivazol cortivazol NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 GR GR PROPN NNP Number=Sing _ _ _ _ 38 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3153 # text = Cortivazol significantly induced GR mRNA in the normal CEM-C7 as well as in two classes of dex-resistant clones, although the dex-resistant clones needed at least 10 times more cortivazol than the normal cells for significant GR mRNA induction. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 significantly significantly ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 GR Gr PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 CEM cem PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 C7 C7 NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 classes class NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 20 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 25 clones clone NOUN NNS Number=Plur _ _ _ _ 26 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADV RB _ _ _ _ _ 28 least least ADV RBS Degree=Sup _ _ _ _ 29 10 10 NUM CD NumType=Card _ _ _ _ 30 times time NOUN NNS Number=Plur _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 cortivazol cortivazol NOUN NN Number=Sing _ _ _ _ 33 than than ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 normal normal ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 significant significant ADJ JJ Degree=Pos _ _ _ _ 39 GR GR PROPN NNP Number=Sing _ _ _ _ 40 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3154 # text = Increased levels of GR mRNA were noticed as early as 3 h after treatment. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GR GR PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 noticed notice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 as as ADV RB _ _ _ _ _ 9 early early ADV RB Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3155 # text = A general correlation between induction of GR mRNA and lysis of the normal and dex-resistant cells was found. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 general general ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GR GR PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 lysis lysis NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dex dex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3156 # text = Positive induction of GR mRNA might be one of the earliest crucial steps in the lysis of normal and dex-resistant CEM cells, or might serve as a marker for the process. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GR GR PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 12 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 13 steps step NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 lysis lysis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 21 CEM CEM PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 might might AUX MD VerbForm=Fin _ _ _ _ 26 serve serve VERB VB VerbForm=Inf _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 marker marker NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3157 # text = However, the lysis pathway in the dex-resistant cells is defective in that dex-resistant clones needed significantly more cortivazol than the normal cells for lysis of the cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 lysis lysis NOUN NN Number=Sing _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 dex- dex- SYM NFP _ _ _ _ SpaceAfter=No 9 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 defective defective ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 dex- dex- SYM NFP _ _ _ _ SpaceAfter=No 16 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 17 clones clone NOUN NNS Number=Plur _ _ _ _ 18 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 cortivazol cortivazol ADJ JJ Degree=Pos _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 lysis lysis NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3158 # text = Document 003001202 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001202 003001202 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3159 # text = Expression of PILOT, a putative transcription factor, requires two signals and is cyclosporin A sensitive in T cells. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PILOT Pilot PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 putative putative ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 cyclosporin cyclosporin VERB VB VerbForm=Inf _ _ _ _ 16 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 sensitive sensitive NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3160 # text = Few known genes (IL-2, members of the IL-8 family, interferon-gamma) are induced in T cells only through the combined effect of phorbol myristic acetate (PMA) and a Ca(2+)-ionophore, and expression of only these genes can be fully suppressed by Cyclosporin A (CyA). 1 Few few ADJ JJ Degree=Pos _ _ _ _ 2 known know ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 8 8 NUM CD NumType=Card _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 33 myristic myristic ADJ JJ Degree=Pos _ _ _ _ 34 acetate acetate NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 +) +) SYM NFP _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 ionophore ionophore ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 only only ADV RB _ _ _ _ _ 51 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ _ 53 can can AUX MD VerbForm=Fin _ _ _ _ 54 be be AUX VB VerbForm=Inf _ _ _ _ 55 fully fully ADV RB _ _ _ _ _ 56 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 59 A A PROPN NNP Number=Sing _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 3161 # text = We have identified a putative transcription factor, designated PILOT, with an identical dual signal requirement for expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 putative putative ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 PILOT Pilot NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 identical identical ADJ JJ Degree=Pos _ _ _ _ 15 dual dual ADJ JJ Degree=Pos _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 requirement requirement NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3162 # text = Induction of the PILOT gene is detectable in human T cells 20 min following activation in the presence of cycloheximide and is fully suppressed by CyA. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PI PI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 LOT lot NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 20 20 NUM CD NumType=Card _ _ _ _ 14 min min NOUN NNS Number=Plur _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 fully fully ADV RB _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3163 # text = The PILOT protein has a calculated M(r) of 42.6 kDa and contains three zinc fingers of the C2H2-type at the carboxyl-terminus which are highly homologous to the zinc finger regions of the transcription factors EGR1, EGR2, and pAT 133. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PI pi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 LOT Lot NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 calculated calculate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 42.6 42.6 NUM CD NumType=Card _ _ _ _ 14 kDa kDa PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 three three NUM CD NumType=Card _ _ _ _ 18 zinc zinc NOUN NN Number=Sing _ _ _ _ 19 fingers finger NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 C2 C2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT : _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 terminus terminus NOUN NN Number=Sing _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 highly highly ADV RB _ _ _ _ _ 34 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 zinc zinc NOUN NN Number=Sing _ _ _ _ 38 finger finger NOUN NN Number=Sing _ _ _ _ 39 regions region NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 transcription transcription NOUN NN Number=Sing _ _ _ _ 43 factors factor NOUN NNS Number=Plur _ _ _ _ 44 EGR1 EGR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 EGR2 EGR2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 pAT pAT NOUN NN Number=Sing _ _ _ _ 50 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3164 # text = In contrast to T cells, in fibroblasts PILOT gene expression requires only one signal (PMA) and is not affected by CyA. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 9 PI PI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 LOT LOT PROPN NNP Number=Sing _ _ _ _ 11 gene gene ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3165 # text = This observation directly demonstrates the existence of a Ca2+ signal-dependent regulatory element obligatory for expression of some genes in T cells but not in fibroblasts. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 directly directly ADV RB _ _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 existence existence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 obligatory obligatory NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3166 # text = This differential expression model will be valuable in the dissection of the dual signal pathway in T cells and the effects of CyA upon it. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differential differential ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 will will AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 valuable valuable ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 dissection dissection NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 dual dual ADJ JJ Degree=Pos _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 CyA CyA PROPN NNP Number=Sing _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3167 # text = Document 003001203 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001203 003001203 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3168 # text = ras protein activity is essential for T-cell antigen receptor signal transduction. 1 ras ra NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3169 # text = In a Jurkat cell model of T-cell activation an interleukin-2 promoter/reporter gene construct was activated by antigen receptor agonism in combination with the lymphokine interleukin-1. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 construct construct NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 agonism agonism NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 combination combination NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3170 # text = Antigen receptor signals could be mimicked by suboptimal activation of protein kinase C (PKC) with phorbol esters in combination with calcium mobilization by an ionophore. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 esters ester NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 combination combination NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ _ 24 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3171 # text = In cotransfection experiments, oncogenic rats obviated the need for PKC stimulation but did not replace either the calcium signal or interleukin-1. 1 In in ADP IN _ _ _ _ _ 2 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 6 rats rat NOUN NNS Number=Plur _ _ _ _ 7 obviated obviate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 need need NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 PKC PKC NOUN NN Number=Sing _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 replace replace VERB VB VerbForm=Inf _ _ _ _ 17 either either CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3172 # text = Activated ras expression also replaced the requirement for PKC stimulation in activation of the T-cell transcription factor NF-AT. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 ras ra NOUN NNS Number=Plur _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 replaced replace VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 requirement requirement NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 PKC PKC NOUN NN Number=Sing _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3173 # text = A dominant inhibitory ras mutant specifically blocked antigen receptor agonism, indicating that ras activity is required for antigen receptor signaling. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 3 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 4 ras ra AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 6 specifically specifically ADV RB _ _ _ _ _ 7 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 agonism agonism NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 ras ras NOUN NNS Number=Plur _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3174 # text = In addition, an inhibitor of PKC blocked both activated ras and phorbol ester stimulation, suggesting a role for ras upstream of PKC. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PKC PKC PROPN NNP Number=Sing _ _ _ _ 8 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 ras ra NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 14 ester ester NOUN NN Number=Sing _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 ras ra NOUN NNS Number=Plur _ _ _ _ 22 upstream upstream NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3175 # text = Document 003001204 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001204 003001204 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3176 # text = Differential induction of interferon (IFN)-inducible protein 10 following differentiation of a monocyte, macrophage cell lineage is related to the changes of nuclear proteins bound to IFN stimulus response element and kappaB sites. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interferon interferon PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 10 10 NUM CD NumType=Card _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ _ 29 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 IFN IFN VERB VB VerbForm=Inf _ _ _ _ 32 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 element element NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 kappaB kappab NOUN NN Number=Sing _ _ _ _ 37 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3177 # text = We examined chemokine gene expression following the differentiation of a monocyte, macrophage cell lineage. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 following follow VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3178 # text = The human monoblastic cell line, U937 was differentiated to macrophages by the treatment with either phorbol 12-myristate 13-acetate (PMA), retinoic acid (RA), or vitamin D3 (VitD3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 U937 U937 NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 either either DET DT _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 29 acid acid NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 36 D3 D3 NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3179 # text = The gene expression of interferon (IFN)-inducible protein 10 (IP-10) (a CXC chemokine) was markedly augmented by the IFNgamma treatment in PMA- or RA-differentiated U937 cells, but only marginally in undifferentiated or VitD3-treated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interferon interferon PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 CXC Cxc NOUN NN Number=Sing _ _ _ _ 21 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 markedly markedly ADV RB _ _ _ _ _ 25 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 29 treatment treatment NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 U937 U937 NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 only only ADV RB _ _ _ _ _ 42 marginally marginally ADV RB _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3180 # text = In contrast, another inducible gene expression of monocyte chemotactic protein-1 (a CC chemokine) and the activation of the transcriptional factor (FcRFgamma) bound to the gamma response region were similarly or less abundantly induced by IFNgamma treatment in PMA- or RA-differentiated U937 cells, indicating that increased IP-10 mRNA induction was not due to the augmented ability of the cells to respond to the presence of IFNgamma. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 another another DET DT _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 10 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CC cc NOUN NN Number=Sing _ _ _ _ 17 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 FcRFgamma FcRFgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 bound bound ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 gamma gamma NOUN NN Number=Sing _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 region region NOUN NN Number=Sing _ _ _ _ 35 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 similarly similarly ADV RB _ _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 less less ADV RBR Degree=Cmp _ _ _ _ 39 abundantly abundantly ADV RB _ _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 43 treatment treatment NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 U937 U937 NOUN NN Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 55 that that SCONJ IN _ _ _ _ _ 56 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 10 10 NUM CD NumType=Card _ _ _ _ 60 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 61 induction induction NOUN NN Number=Sing _ _ _ _ 62 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 63 not not PART RB _ _ _ _ _ 64 due due ADP IN _ _ _ _ _ 65 to to ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 augmented augmented VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 ability ability NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 cells cell NOUN NNS Number=Plur _ _ _ _ 72 to to PART TO _ _ _ _ _ 73 respond respond VERB VB VerbForm=Inf _ _ _ _ 74 to to ADP IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 presence presence NOUN NN Number=Sing _ _ _ _ 77 of of ADP IN _ _ _ _ _ 78 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 3181 # text = Increased expression of IFNgamma-induced IP-10 mRNA following the differentiation of U937 cells was mediated largely by augmented transcriptional activity of the gene and was related to differentiation-dependent changes of the proteins bound to IFN stimulus response element (ISRE) and kB sites, suggesting that these nuclear proteins may determine the IP-10 mRNA inducibility by IFNgamma. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 U937 U937 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 largely largely ADV RB _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 changes change NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ _ 38 bound bound ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 IFN Ifn VERB VB VerbForm=Inf _ _ _ _ 41 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 element element NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 ISRE ISRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 kB kb NOUN NN Number=Sing _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 52 that that SCONJ IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 55 proteins protein NOUN NNS Number=Plur _ _ _ _ 56 may may AUX MD VerbForm=Fin _ _ _ _ 57 determine determine VERB VB VerbForm=Inf _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT , _ _ _ _ SpaceAfter=No 61 10 10 NUM CD NumType=Card _ _ _ _ 62 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 63 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 64 by by ADP IN _ _ _ _ _ 65 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3182 # text = Document 003001205 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001205 003001205 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3183 # text = Cloning and characterization of the beta subunit of human proximal sequence element-binding transcription factor and its involvement in transcription of small nuclear RNA genes by RNA polymerases II and III. 1 Cloning Cloning NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 characterization characterization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 involvement involvement NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 RNA RNa NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 RNA RNA PROPN NNP Number=Sing _ _ _ _ 29 polymerases polymerase NOUN NNS Number=Plur _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3184 # text = The proximal sequence element (PSE)-binding transcription factor (PTF), which binds the PSE of both RNA polymerase II- and RNA polymerase III-transcribed mammalian small nuclear RNA (snRNA) genes, is essential for their transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PSE PSE NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PTF PTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 PSE Pse NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ _ 23 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 RNA RNA PROPN NNP Number=Sing _ _ _ _ 28 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 29 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT : _ _ _ _ SpaceAfter=No 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 33 small small ADJ JJ Degree=Pos _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 RNA RNA PROPN NNP Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 snRNA snRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 essential essential ADJ JJ Degree=Pos _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3185 # text = We previously reported the purification of human PTF, a complex of four subunits, and the molecular cloning and characterization of PTF gamma and delta subunits. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 purification purification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 PTF PTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 four four NUM CD NumType=Card _ _ _ _ 14 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 cloning cloning NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PTF PTF NOUN NN Number=Sing _ _ _ _ 24 gamma gamma NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 delta delta NOUN NN Number=Sing _ _ _ _ 27 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3186 # text = Here we describe the isolation and expression of a cDNA encoding PTF beta, as well as functional studies using anti-PTF beta antibodies. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 isolation isolation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 11 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 12 PTF Ptf PROPN NNP Number=Sing _ _ _ _ 13 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 studies study NOUN NNS Number=Plur _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 anti-PTF anti-ptf ADJ JJ Degree=Pos _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3187 # text = Native PTF beta, in either protein fractions or a PTF-Oct-1-DNA complex, can be recognized by polyclonal antibodies raised against recombinant PTF beta. 1 Native native ADJ JJ Degree=Pos _ _ _ _ 2 PTF PTF NOUN NN Number=Sing _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 either either DET DT _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 fractions fraction NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 PTF- Ptf- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 23 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 24 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 against against ADP IN _ _ _ _ _ 26 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 27 PTF PTF PROPN NNP Number=Sing _ _ _ _ 28 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3188 # text = Immunodepletion studies show that PTF beta is required for transcription of both classes of snRNA genes in vitro. 1 Immunodepletion Immunodepletion NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PTF PTF PROPN NNP Number=Sing _ _ _ _ 6 beta beta PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 classes classe NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3189 # text = In addition, immunoprecipitation analyses demonstrate that substantial and similar molar amounts of TATA-binding protein (TBP) and TFIIIB90 can weakly associate with PTF at low salt conditions, but this association is dramatically reduced at high salt concentrations. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 molar molar ADJ JJ Degree=Pos _ _ _ _ 12 amounts amount NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TBP TBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 TFIIIB90 TFIIIB90 PROPN NNP Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 weakly weakly ADV RB _ _ _ _ _ 25 associate associate VERB VB VerbForm=Inf _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 PTF Ptf NOUN NN Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 low low ADJ JJ Degree=Pos _ _ _ _ 30 salt salt NOUN NN Number=Sing _ _ _ _ 31 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 association association NOUN NN Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 dramatically dramatically ADV RB _ _ _ _ _ 38 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 at at ADP IN _ _ _ _ _ 40 high high ADJ JJ Degree=Pos _ _ _ _ 41 salt salt NOUN NN Number=Sing _ _ _ _ 42 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3190 # text = Along with our previous demonstration of both physical interactions between PTF gamma/PTF delta and TBP and the involvement of TFIIIB90 in the transcription of class III snRNA genes, these results are consistent with the notion that a TBP-containing complex related to TFIIIB is required for the transcription of class III snRNA genes, and acts through weak interaction with the four-subunit PTF. 1 Along along ADP IN _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 previous previous ADJ JJ Degree=Pos _ _ _ _ 5 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 physical physical ADJ JJ Degree=Pos _ _ _ _ 9 interactions interaction NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 PTF PTF PROPN NNP Number=Sing _ _ _ _ 12 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 PTF PTF PROPN NNP Number=Sing _ _ _ _ 15 delta delta PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 TBP TBP PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 involvement involvement NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TFIIIB90 TFIIIB90 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 class class NOUN NN Number=Sing _ _ _ _ 28 III Iii NUM CD NumType=Card _ _ _ _ 29 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 results result NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 notion notion NOUN NN Number=Sing _ _ _ _ 39 that that PRON WDT PronType=Rel _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 containing containing VERB VBG VerbForm=Ger _ _ _ _ 44 complex complex NOUN NN Number=Sing _ _ _ _ 45 related related ADJ JJ Degree=Pos _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 TFIIIB TFIIIB PROPN NNP Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 for for ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 transcription transcription NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 class class NOUN NN Number=Sing _ _ _ _ 55 III iii NUM CD NumType=Card _ _ _ _ 56 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 57 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 through through ADP IN _ _ _ _ _ 62 weak weak ADJ JJ Degree=Pos _ _ _ _ 63 interaction interaction NOUN NN Number=Sing _ _ _ _ 64 with with ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 four-subunit four-subunit ADJ JJ Degree=Pos _ _ _ _ 67 PTF Ptf NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3191 # text = Document 003001206 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001206 003001206 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3192 # text = Tandem AP-1-binding sites within the human beta-globin dominant control region function as an inducible enhancer in erythroid cells. 1 Tandem tandem PROPN NNP Number=Sing _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 dominant dominant NOUN NN Number=Sing _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3193 # text = A powerful enhancer has been mapped to an 18-bp DNA segment located 11 kb 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 segment segment NOUN NN Number=Sing _ _ _ _ 14 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 11 11 NUM CD NumType=Card _ _ _ _ 16 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 3194 # text = 5' to the human epsilon-globin gene within the dominant control or locus-activating region. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activating activating VERB VBG VerbForm=Ger _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3195 # text = This enhancer is inducible in K562 human erythroleukemia cells, increasing linked gamma-globin promoter/luciferase gene expression to 170-fold over an enhancerless construct. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 K562 K562 NUM CD NumType=Card _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 12 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 globin globin NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 170 170 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 over over ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 enhancerless enhancerless ADJ JJ Degree=Pos _ _ _ _ 28 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3196 # text = The enhancer consists of tandem AP-1-binding sites, phased 10 bp apart, which are both required for full activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tandem tandem NOUN NN Number=Sing _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 phased phase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 apart apart ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 both both ADV RB _ _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 full full ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3197 # text = DNA-protein binding assays with nuclear extracts from induced cells demonstrate a high molecular weight complex on the enhancer. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 molecular molecular NOUN NN Number=Sing _ _ _ _ 15 weight weight NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3198 # text = The formation of this complex also requires both AP-1 sites and correlates with maximal enhancer activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 correlates correlate NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3199 # text = Induction of the enhancer may have a role in the increase in globin gene transcription that characterizes erythroid maturation. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 have have VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 globin globin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 characterizes characterize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3200 # text = Enhancer activity appears to be mediated by the binding of a complex of proteins from the jun and fos families to tandem AP-1 consensus sequences. 1 Enhancer Enhancer ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 jun jun NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 families family NOUN NNS Number=Plur _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 tandem tandem VERB VB VerbForm=Inf _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 consensus consensus NOUN NN Number=Sing _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3201 # text = Document 003001207 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001207 003001207 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3202 # text = Activation of NF-kappa B by phosphatase inhibitors involves the phosphorylation of I kappa B alpha at phosphatase 2A-sensitive sites. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B benefit PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha ADV RB _ _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 20 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3203 # text = Activation of NF-kappa B by various cellular stimuli involves the phosphorylation and subsequent degradation of its inhibitor, I kappa B alpha, although the underlying mechanism remains unclear. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 11 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 29 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 30 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3204 # text = In the present study, the role of serine/threonine phosphatases in the regulation of I kappa B alpha phosphorylation was investigated. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 threonine threonine NUM CD NumType=Card _ _ _ _ 12 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa X FW Foreign=Yes _ _ _ _ 19 B B X LS _ _ _ _ _ 20 alpha alpha X FW Foreign=Yes _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3205 # text = Our studies demonstrate that incubation of human T cells with low concentrations (approximately 1-5 nM) of calyculin A or okadaic acid, potent inhibitors of protein phosphatase type 1 (PP-1) and type 2A (PP-2A), induces the phosphorylation of I kappa B alpha even in the absence of any cellular stimulus. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 incubation incubation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 approximately approximately ADV RB _ _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 22 A a NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 25 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 potent potent NOUN NN Number=Sing _ _ _ _ 28 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 32 type type NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 X LS _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 type type NOUN NN Number=Sing _ _ _ _ 41 2A 2a NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 54 kappa kappa X GW _ _ _ _ _ 55 B benefit X GW _ _ _ _ _ 56 alpha alpha X GW _ _ _ _ _ 57 even even ADV RB _ _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 absence absence NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 any any DET DT _ _ _ _ _ 63 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 64 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 3206 # text = This action of the phosphatase inhibitors, which is associated with the activation of the RelA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 action action NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 RelA. RelA. PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 3207 # text = p50 NF-kappa B heterodimer, is not affected by agents that block the induction of I kappa B alpha phosphorylation by tumor necrosis factor alpha (TNF-alpha). 1 p50 p50 NUM CD NumType=Card _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa X GW _ _ _ _ _ 20 B b X GW _ _ _ _ _ 21 alpha alpha X GW _ _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3208 # text = Furthermore, the phosphorylated I kappa B alpha from calyculin A-treated cells, but not that from TNF-alpha-stimulated cells, is sensitive to PP-2A in vitro, suggesting the existence of fundamental differences in the phosphorylation of I kappa B alpha induced by the two different NF-kappa B inducers. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 calyculin calyculin PROPN NNP Number=Sing _ _ _ _ 11 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not ADV RB _ _ _ _ _ 18 that that ADV WRB PronType=Dem _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 PP pp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 existence existence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 42 differences difference NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 48 kappa kappa PROPN NNP Number=Sing _ _ _ _ 49 B b PROPN NNP Number=Sing _ _ _ _ 50 alpha alpha NOUN NN Number=Sing _ _ _ _ 51 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 two two NUM CD NumType=Card _ _ _ _ 55 different different ADJ JJ Degree=Pos _ _ _ _ 56 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3209 # text = However, induction of I kappa B alpha phosphorylation by both TNF-alpha and the phosphatase inhibitors is associated with the subsequent degradation of I kappa B alpha. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B B X LS _ _ _ _ _ 8 alpha alpha X FW Foreign=Yes _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ _ 29 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3210 # text = We further demonstrate that TNF-alpha- and calyculin A-induced I kappa B alpha degradation exhibits similar but not identical sensitivities to a proteasome inhibitor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 11 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ _ 19 exhibits exhibit NOUN NNS Number=Plur _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 identical identical ADJ JJ Degree=Pos _ _ _ _ 24 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 28 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3211 # text = Together, these results suggest that phosphorylation of I kappa B alpha, mediated through both the TNF-alpha-inducible and the PP-2A-opposing kinases, may serve to target I kappa B alpha for proteasome-mediated degradation. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 both both DET PDT _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 opposing opposing NOUN NN Number=Sing _ _ _ _ 30 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 serve serve VERB VB VerbForm=Inf _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 target target VERB VB VerbForm=Inf _ _ _ _ 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 kappa kappa X GW _ _ _ _ _ 38 B b X GW _ _ _ _ _ 39 alpha alpha X GW _ _ _ _ _ 40 for for X GW _ _ _ _ _ 41 proteasome proteasome X GW _ _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3212 # text = Document 003001208 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001208 003001208 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3213 # text = LPS-Induced NF-kappaB activation and TNF-alpha release in human monocytes are protein tyrosine kinase dependent and protein kinase C independent. 1 LPS Lps INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 Induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 protein protein ADJ JJ Degree=Pos _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C c X GW _ _ _ _ _ 25 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3214 # text = BACKGROUND: Tumor necrosis factor alpha (TNF-alpha) is an important mediator of septic shock. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Tumor tumor PROPN NNP Number=Sing _ _ _ _ 4 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 mediator mediator NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 septic septic ADJ JJ Degree=Pos _ _ _ _ 18 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3215 # text = Endotoxin (LPS) signal transduction in human monocytes leads to activation of nuclear factor-kappa B (NF-kappaB) and TNF-alpha release. 1 Endotoxin Endotoxin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transduction transduction NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3216 # text = Previous studies have implicated activation of both protein kinase C (PKC) and protein tyrosine kinases (PTK) in LPS-induced NF-kappaB activation and TNF-alpha production. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3217 # text = We hypothesized that inhibition of either PKC or PTK would decrease LPS-induced NF-kappaB DNA binding and TNF-alpha release in human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 PKC PKC PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 PTK PTK PROPN NNP Number=Sing _ _ _ _ 10 would would AUX MD VerbForm=Fin _ _ _ _ 11 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 12 LPS LPS ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3218 # text = MATERIALS AND METHODS: Human monocytes were stimulated with PMA (50 ng/ml) alone or LPS (100 ng/ml) with and without a nonspecific serine/threonine protein kinase inhibitor staurosporine (Stauro), a specific pan-PKC inhibitor bisindolylmaleimide (Bis), or an inhibitor of PTK genistein (Gen). 1 MATERIALS material NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 50 50 NUM CD NumType=Card _ _ _ _ 13 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 alone alone ADJ JJ Degree=Pos _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 LPS LPS NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 100 100 NUM CD NumType=Card _ _ _ _ 22 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 without without ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 30 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 threonine threonine NUM CD NumType=Card _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ _ 35 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 36 staurosporine staurosporine NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 Stauro Stauro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 specific specific ADJ JJ Degree=Pos _ _ _ _ 43 pan pan NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 PKC Pkc NOUN NN Number=Sing _ _ _ _ 46 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 47 bisindolylmaleimide bisindolylmaleimide NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 Bis Bis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 or or CCONJ CC _ _ _ _ _ 53 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 PTK PTK PROPN NNP Number=Sing _ _ _ _ 57 genistein genistein PROPN NNP Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 Gen Gen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3219 # text = TNF-alpha release in culture supernatants was measured by an ELISA. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 release release NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 culture culture NOUN NN Number=Sing _ _ _ _ 7 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 ELISA ELISa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3220 # text = NF-kappaB DNA binding was evaluated by electrophoretic mobility shift assay. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 10 mobility mobility NOUN NN Number=Sing _ _ _ _ 11 shift shift NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3221 # text = RESULTS: LPS increased NF-kappaB DNA binding and TNF-alpha release in human monocytes. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 LPS Lp NOUN NNS Number=Plur _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 release release NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3222 # text = Nonspecific protein kinase inhibition inhibited NF-kappaB activation and TNF-alpha release, while specific PKC inhibition with Bis had no effect on LPS-induced NF-kappaB DNA binding or TNF-alpha release. 1 Nonspecific Nonspecific ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 PKC Pkc NOUN NN Number=Sing _ _ _ _ 19 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 Bis Bis PROPN NNP Number=Sing _ _ _ _ 22 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 binding binding NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3223 # text = PTK inhibition with Gen attenuated both LPS-induced NF-kappaB DNA binding and TNF-alpha production in human monocytes. 1 PTK Ptk NOUN NN Number=Sing _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 Gen Gen PROPN NNP Number=Sing _ _ _ _ 5 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3224 # text = Direct activation of PKC with PMA induced both NF-kappaB activation and TNF-alpha production by human monocytes. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PKC PKC PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 PMA PMA PROPN NNP Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3225 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3226 # text = These results suggest that LPS-induced NF-kappaB activation and TNF-alpha release in human monocytes are independent of PKC activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 release release NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 independent independent ADJ JJ Degree=Pos _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PKC PKC ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3227 # text = Furthermore, our results provide evidence that PTK plays a role in LPS-induced NF-kappaB activation and TNF-alpha release in human monocytes and thus could be a potential therapeutic target in inflammatory states. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 PTK PTK PROPN NNP Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 thus thus ADV RB _ _ _ _ _ 30 could could AUX MD VerbForm=Fin _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 potential potential ADJ JJ Degree=Pos _ _ _ _ 34 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 35 target target NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 38 states state NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3228 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3229 # text = Document 003001209 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001209 003001209 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3230 # text = Inhibition of HIV-1 replication by combination of a novel inhibitor of TNF-alpha with AZT. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 AZT AZT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3231 # text = The small molecule S9a was derived from an established tumor necrosis factor-alpha (TNF-alpha) inhibitor (Canventol) by replacement of the isopropylidine group with a phenyl ring. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 S9 s9 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Canventol Canventol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 replacement replacement NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 isopropylidine isopropylidine NOUN NN Number=Sing _ _ _ _ 30 group group NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 phenyl phenyl NOUN NN Number=Sing _ _ _ _ 34 ring ring NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3232 # text = S9a at 10 to 100 nM inhibited HIV production as potently as 3'-azido-3'-deoxythymidine (AZT), an inhibitor of viral reverse transcriptase. 1 S9 S9 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 10 10 NUM CD NumType=Card _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 100 100 NUM CD NumType=Card _ _ _ _ 7 nM nm PROPN NNP Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 potently potently ADV RB _ _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 azido azido NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 deoxythymidine deoxythymidine NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 AZT AZT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 reverse reverse NOUN NN Number=Sing _ _ _ _ 32 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3233 # text = Furthermore, S9a and AZT in combination, at noncytoxic concentrations strongly inhibited HIV-1 replication that was more than additive and substantially prolonged the appearance of virus both in acutely infected CD4+ lymphocytes (SupT) in culture and in peripheral blood mononuclear cells (PBMCs) infected with a primary HIV-1 isolate. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 S9 S9 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 a a NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 AZT AZT NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 noncytoxic noncytoxic ADJ JJ Degree=Pos _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 more more ADJ JJR Degree=Cmp _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 additive additive ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 substantially substantially ADV RB _ _ _ _ _ 26 prolonged prolonge VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 appearance appearance NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 both both CCONJ CC _ _ _ _ _ 32 in in ADV RB _ _ _ _ _ 33 acutely acutely ADV RB _ _ _ _ _ 34 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 SupT SupT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 culture culture NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 46 blood blood NOUN NN Number=Sing _ _ _ _ 47 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 55 primary primary ADJ JJ Degree=Pos _ _ _ _ 56 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 1 1 NUM CD NumType=Card _ _ _ _ 59 isolate isolate NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 3234 # text = S9a inhibited TNF-alpha promoter-driven reporter gene activity. 1 S9 S9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 reporter reporter NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3235 # text = It was proposed that the mechanism of antiviral action of S9a was on the host cell, by blocking TNF-alpha transcription via a Tat-induced tar-independent loop, which decreases downstream NF-kappaB activation of HIV-1 long terminal repeat (LTR). 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 S9 s9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 host host NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 blocking block VERB VBG VerbForm=Ger _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 tar tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 independent independent ADJ JJ Degree=Pos _ _ _ _ 33 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 long long ADJ JJ Degree=Pos _ _ _ _ 47 terminal terminal NOUN NN Number=Sing _ _ _ _ 48 repeat repeat NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3236 # text = S9a was superior to the first generation compound Canventol, which was superior to the natural compound sarcophytol A, demonstrating that further structure-based enhancement of potency of these compounds is feasible. 1 S9 S9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 superior superior ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 generation generation NOUN NN Number=Sing _ _ _ _ 9 compound compound NOUN NN Number=Sing _ _ _ _ 10 Canventol Canventol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 superior superior ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 natural natural ADJ JJ Degree=Pos _ _ _ _ 18 compound compound NOUN NN Number=Sing _ _ _ _ 19 sarcophytol sarcophytol NOUN NN Number=Sing _ _ _ _ 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 demonstrating demonstrate VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 further further ADJ JJ Degree=Pos _ _ _ _ 25 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 potency potency NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 compounds compound NOUN NNS Number=Plur _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 feasible feasible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3237 # text = This study suggests a therapeutic approach against AIDS by application of two drugs, one against a cellular and the other a viral target, which may provide an approach to the problem of frequent emergence of resistant variants to combinations of drugs that target only HIV genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 6 approach approach NOUN NN Number=Sing _ _ _ _ 7 against against ADP IN _ _ _ _ _ 8 AIDS aids NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 application application NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 against against ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cellular cellular NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 provide provide VERB VB VerbForm=Inf _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 approach approach NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 problem problem NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 36 emergence emergence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 39 variants variant NOUN NNS Number=Plur _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 combinations combination NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 drugs drug NOUN NNS Number=Plur _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 target target VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 only only ADV RB _ _ _ _ _ 47 HIV HIV NOUN NN Number=Sing _ _ _ _ 48 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3238 # text = Document 003001210 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001210 003001210 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3239 # text = Oct2 transactivation from a remote enhancer position requires a B-cell-restricted activity. 1 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 remote remote ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 position position NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3240 # text = Previous cotransfection experiments had demonstrated that ectopic expression of the lymphocyte-specific transcription factor Oct2 could efficiently activate a promoter containing an octamer motif. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 Oct2 oct2 NOUN NN Number=Sing _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 efficiently efficiently ADV RB _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 25 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3241 # text = Oct2 expression was unable to stimulate a multimerized octamer enhancer element in HeLa cells, however. 1 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 unable unable ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 octamer octamer NOUN NN Number=Sing _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3242 # text = We have tested a variety of Oct2 isoforms generated by alternative splicing for the capability to activate an octamer enhancer in nonlymphoid cells and a B-cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 variety variety NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 8 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 9 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 12 splicing splicing NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 capability capability NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 activate activate VERB VB VerbForm=Inf _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 20 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3243 # text = Our analyses show that several Oct2 isoforms can stimulate from a remote position but that this stimulation is restricted to B cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 7 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 remote remote ADJ JJ Degree=Pos _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3244 # text = This result indicates the involvement of either a B-cell-specific cofactor or a specific modification of a cofactor or the Oct2 protein in Oct2-mediated enhancer activation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 either either CCONJ CC _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 modification modification NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Oct2 Oct2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3245 # text = Mutational analyses indicate that the carboxy-terminal domain of Oct2 is critical for enhancer activation. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3246 # text = Moreover, this domain conferred enhancing activity when fused to the Oct1 protein, which by itself was unable to stimulate from a remote position. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 fused fuse ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Oct1 Oct1 PROPN NNP Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 remote remote ADJ JJ Degree=Pos _ _ _ _ 25 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3247 # text = The glutamine-rich activation domain present in the amino-terminal portion of Oct2 and the POU domain contribute only marginally to the transactivation function from a distal position. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glutamine glutamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 rich rich ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 present present ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 portion portion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 POU POU NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 contribute contribute NOUN NN Number=Sing _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 marginally marginally ADV RB _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 distal distal ADJ JJ Degree=Pos _ _ _ _ 30 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3248 # text = Document 003001211 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001211 003001211 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3249 # text = Characterization of an immediate-early gene induced in adherent monocytes that encodes I kappa B-like activity. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 like like ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3250 # text = We have cloned a group of cDNAs representing mRNAs that are rapidly induced following adherence of human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 group group NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 8 representing represent VERB VBG VerbForm=Ger _ _ _ _ 9 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 rapidly rapidly ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 adherence adherence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3251 # text = One of the induced transcripts (MAD-3) encodes a protein of 317 amino acids with one domain containing five tandem repeats of the cdc10/ankyrin motif, which is 60% similar (46% identical) to the ankyrin repeat region of the precursor of NF-kappa B/KBF1 p50. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 317 317 NUM CD NumType=Card _ _ _ _ 16 amino amino DET DT _ _ _ _ _ 17 acids acid NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 one one NUM CD NumType=Card _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 five five NUM CD NumType=Card _ _ _ _ 23 tandem tandem NOUN NN Number=Sing _ _ _ _ 24 repeats repeat NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cdc10 cdc10 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 % % SYM NN Number=Sing _ _ _ _ 36 similar similar ADJ JJ Degree=Pos _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 46 46 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 % % SYM NN Number=Sing _ _ _ _ 40 identical identical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 45 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 region region NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 precursor precursor NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 kappa kappa PROPN NNP Number=Sing _ _ _ _ 54 B/KBF1 B/kbf1 PROPN NNP Number=Sing _ _ _ _ 55 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3252 # text = The C-terminus has a putative protein kinase C phosphorylation site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 terminus terminus NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 putative putative ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C c NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3253 # text = In vitro translated MAD-3 protein was found to specifically inhibit the DNA-binding activity of the p50/p65 NF-kappa B complex but not that of the p50/p50 KBF1 factor or of other DNA-binding proteins. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 specifically specifically ADV RB _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 p50 p50 NUM CD NumType=Card _ _ _ _ 36 KBF1 KBF1 NUM CD NumType=Card _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3254 # text = The MAD-3 cDNA encodes an I kappa B-like protein that is likely to be involved in regulation of transcriptional responses to NF-kappa B, including adhesion-dependent pathways of monocyte activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 responses respons NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 34 pathways pathway NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3255 # text = Document 003001212 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001212 003001212 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3256 # text = Inhibition of NF-kappa B activation in human T-cell lines by anetholdithiolthione. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 anetholdithiolthione anetholdithiolthione NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3257 # text = Nuclear factor (NF)-kappa B is a redox sensitive cytosolic transcription factor. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 redox redox NOUN NN Number=Sing _ _ _ _ 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3258 # text = Redox regulation of NF-kappa B has been implicated in the activation of the human immuno-deficiency virus (HIV). 1 Redox Redox NOUN NN Number=Sing _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immuno immuno NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -deficiency -deficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3259 # text = Therefore, inhibition of NF-kappa B activation may be an effective strategy for acquired immunodeficiency syndrome therapy. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 effective effective ADJ JJ Degree=Pos _ _ _ _ 14 strategy strategy NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 acquired acquire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 19 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3260 # text = Anetholdithiolthione (ADT, 5-[p-methoxyphenyl]-3H-1,2-dithiol-3-thione) is an antioxidant which has been used to protect against acetaminophen- and CCl4-induced hepatotoxicity, lipid peroxidation, radiation injury, and also has been used clinically as an anti-choleretic agent. 1 Anetholdithiolthione Anetholdithiolthione PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 ADT ADT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 5-[ 5-[ PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 p-methoxyphenyl]-3H-1,2-dithiol p-methoxyphenyl]-3H-1,2-dithiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 thione thione NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 protect protect VERB VB VerbForm=Inf _ _ _ _ 20 against against ADP IN _ _ _ _ _ 21 acetaminophen acetaminophe ADV RB PronType=Dem _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 CCl4 Ccl4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 hepatotoxicity hepatotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 30 peroxidation peroxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 radiation radiation NOUN NN Number=Sing _ _ _ _ 33 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 also also ADV RB _ _ _ _ _ 37 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 clinically clinically ADV RB _ _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 anti-choleretic anti-choleretic ADJ JJ Degree=Pos _ _ _ _ 44 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3261 # text = The present study examined the effect of ADT pretreatment on NF-kappa B activation in response to a variety of stimuli such as H2O2, phorbol myristate acetate (PMA) or tumor necrosis factor alpha (TNF alpha). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ADT Adt ADJ JJ Degree=Pos _ _ _ _ 9 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 variety variety NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 29 myristate myristate NOUN NN Number=Sing _ _ _ _ 30 acetate acetate NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 TNF Tnf NOUN NN Number=Sing _ _ _ _ 41 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3262 # text = PMA and TNF alpha induced activation of (NF)-kappa B in human Jurkat T-cells was partially inhibited by ADT (0.1 mM) pretreatment. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 T- t- SYM NFP _ _ _ _ SpaceAfter=No 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 partially partially ADV RB _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 ADT ADT PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 0.1 0.1 NUM CD NumType=Card _ _ _ _ 26 mM mm NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 pretreatment pretreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3263 # text = ADT (0.1 mM) also inhibited H2O2 induced activation of the transcription factor in the peroxide sensitive human Wurzburg T-cells. 1 ADT ADT PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 0.1 0.1 NUM CD NumType=Card _ _ _ _ 4 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 Wurzburg Wurzburg NOUN NN Number=Sing _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3264 # text = Furthermore, ADT treated Wurzburg cells had significantly higher glutathione levels as compared with untreated cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ADT ADT PROPN NNP Number=Sing _ _ _ _ 4 treated treat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 higher higher ADJ JJR Degree=Cmp _ _ _ _ 10 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3265 # text = H2O2 induced lipid peroxidation in Wurzburg cells was remarkably inhibited by ADT pretreatment. 1 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 4 peroxidation peroxidation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 remarkably remarkably ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ADT Adt ADJ JJ Degree=Pos _ _ _ _ 13 pretreatment pretreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3266 # text = ADT, a pro-glutathione antioxidant, was observed to be capable of modulating NF-kappa B activation. 1 ADT ADT ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 pro-glutathione pro-glutathione ADJ JJ Degree=Pos _ _ _ _ 5 antioxidant antioxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3267 # text = Document 003001213 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001213 003001213 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3268 # text = A lymphoid cell-specific nuclear factor containing c-Rel-like proteins preferentially interacts with interleukin-6 kappa B-related motifs whose activities are repressed in lymphoid cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 c- c- PUNCT : _ _ _ _ SpaceAfter=No 10 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -like -like ADP IN _ _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 preferentially preferentially ADV RB _ _ _ _ _ 14 interacts interact NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B- B- SYM SYM _ _ _ _ SpaceAfter=No 21 related relate ADJ JJ Degree=Pos _ _ _ _ 22 motifs motif NOUN NNS Number=Plur _ _ _ _ 23 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 24 activities activity NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3269 # text = The proto-oncoprotein c-Rel is a member of the nuclear factor kappa B transcription factor family, which includes the p50 and p65 subunits of nuclear factor kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proto-oncoprotein proto-oncoprotein NOUN NN Number=Sing _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Rel Rel NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 member member NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p65 p65 NUM CD NumType=Card _ _ _ _ 25 subunits subunit NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3270 # text = We show here that c-Rel binds to kappa B sites as homodimers as well as heterodimers with p50. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel NOUN NN Number=Sing _ _ _ _ 8 binds bind NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3271 # text = These homodimers and heterodimers show distinct DNA-binding specificities and affinities for various kappa B motifs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 specificities specificity NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 affinities affinity NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3272 # text = In particular, the c-Rel homodimer has a high affinity for interleukin-6 (IL-6) and beta interferon kappa B sites. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel NOUN NN Number=Sing _ _ _ _ 8 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 interferon interferon NOUN NN Number=Sing _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3273 # text = In spite of its association with p50 in vitro, however, we found a lymphoid cell-specific nuclear factor in vivo that contains c-Rel but not p50 epitopes; this factor, termed IL-6 kappa B binding factor 1 In in ADP IN _ _ _ _ _ 2 spite spite NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 association association NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vivo vivo NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 Rel Rel NOUN NN Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ _ 32 epitopes epitope NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 6 6 NUM CD NumType=Card _ _ _ _ 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ _ 43 binding bind VERB VBG VerbForm=Ger _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 3274 # text = II, appears to contain the c-Rel homodimer and preferentially recognizes several IL-6 kappa B-related kappa B motifs. 1 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 contain contain VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 preferentially preferentially ADV RB _ _ _ _ _ 13 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 several several ADJ JJ Degree=Pos _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3275 # text = Although it has been previously shown that the IL-6 kappa B motif functions as a potent IL-1/tumor necrosis factor-responsive element in nonlymphoid cells, its activity was found to be repressed in lymphoid cells such as a Jurkat T-cell line. 1 Although although SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 potent potent NOUN NN Number=Sing _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -responsive -responsive ADJ JJ Degree=Pos _ _ _ _ 27 element element NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 such such ADJ JJ Degree=Pos _ _ _ _ 43 as as ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 46 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3276 # text = We also present evidence that IL-6 kappa B binding factor II functions as a repressor specific for IL-6 kappa B-related kappa B motifs in lymphoid cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 present present VERB VB VerbForm=Inf _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B- B- SYM SYM _ _ _ _ SpaceAfter=No 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 motifs motif NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3277 # text = Document 003001214 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001214 003001214 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3278 # text = The hematopoietic transcription factor PU.1 is downregulated in human multiple myeloma cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 11 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3279 # text = PU.1 is a hematopoietic transcription factor belonging to the Ets-family. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Ets- ets- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3280 # text = It is identical to the Spi-1 oncogene, which is implicated in spleen focus-forming virus-induced murine erythroleukemias. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identical identical ADJ JJ Degree=Pos _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 oncogene oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 spleen spleen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 focus focus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 forming forming VERB VBG VerbForm=Ger _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 murine murine NOUN NN Number=Sing _ _ _ _ 22 erythroleukemias erythroleukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3281 # text = PU.1 seems to be required for early development of multiple hematopoietic lineages, but its expression in mature cells is preferentially observed in cells of the B-cell-and monocyte/macrophage-differentiation lineage. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 mature mature ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 preferentially preferentially ADV RB _ _ _ _ _ 22 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 and and CCONJ CC _ _ _ _ _ 31 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 macrophage-differentiation macrophage-differentiation NOUN NN Number=Sing _ _ _ _ 34 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3282 # text = It binds the so-called Pu box, an important tissue-specific regulatory DNA element present in a number of genes expressed in these cell lineages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 so so ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Pu Pu NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 number number NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3283 # text = We have analyzed the expression and activity of PU.1 during human B-cell development using a panel of B-cell lines representing different stages of maturation, from early precursors to differentiated plasma cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 panel panel NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 representing represent VERB VBG VerbForm=Ger _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 stages stage NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 early early ADJ JJ Degree=Pos _ _ _ _ 32 precursors precursor NOUN NNS Number=Plur _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 differentiated differentiate VERB VB VerbForm=Inf _ _ _ _ 35 plasma plasma NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3284 # text = PU.1 mRNA expression and PU.1 DNA binding activity, as measured by Northern blot analysis and electrophoretic mobility shift assay, respectively, were evident in cell lines representing pro-B, pre-B, and mature B cells. 1 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 PU.1 PU.1 NOUN NN Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 14 blot blot NOUN NN Number=Sing _ _ _ _ 15 analysis analysis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 shift shift NOUN NN Number=Sing _ _ _ _ 20 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 evident evident ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 representing represent VERB VBG VerbForm=Ger _ _ _ _ 30 pro pro ADP IN Typo=Yes _ _ _ SpaceAfter=No 31 -B -b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 pre pre X AFX _ _ _ _ SpaceAfter=No 34 -B -b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 mature mature ADJ JJ Degree=Pos _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3285 # text = We could also show Pu box-dependent transactivation of a reporter gene in transient transfections in these cell lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 could could AUX MD VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 Pu Pu PROPN NNP Number=Sing _ _ _ _ 6 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 transfections transfection NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3286 # text = In contrast, in a number of multiple myeloma cell lines, representing differentiated, plasma cell-like B cells, PU.1 DNA binding activity, mRNA expression, and Pu box-dependent transactivation were absent or detectable at a very low level. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 number number NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 representing represent VERB VBG VerbForm=Ger _ _ _ _ 14 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Pu Pu PROPN NNP Number=Sing _ _ _ _ 33 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 very very ADV RB _ _ _ _ _ 44 low low ADJ JJ Degree=Pos _ _ _ _ 45 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3287 # text = In lymphoblastoid cell lines, which exemplify an intermediate stage of B-cell differentiation, a reduced expression and activity were observed. 1 In in ADP IN _ _ _ _ _ 2 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 exemplify exemplify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 10 stage stage NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3288 # text = The findings in the human multiple myeloma cell lines represent the first examples of B cells with downregulated PU.1 expression and apparently contradict observations in the murine system in which PU.1 is expressed and active in plasmacytoma cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 examples example NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 apparently apparently ADV RB _ _ _ _ _ 23 contradict contradict VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 observations observation NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 murine murine NOUN NN Number=Sing _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 expressed expressed ADJ JJ Degree=Pos _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 active active ADJ JJ Degree=Pos _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3289 # text = At present, it is unclear whether the lack of PU.1 expression and activity in human multiple myeloma cell lines represents a malignancy-associated defect in these cells or exemplifies a normal developmental regulation in terminally differentiated B cells. 1 At at ADP IN _ _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lack lack NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 malignancy malignancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 defect defect NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 exemplifies exemplify NOUN NNS Number=Plur _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 normal normal ADJ JJ Degree=Pos _ _ _ _ 34 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 terminally terminally ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3290 # text = Document 003001215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001215 003001215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3291 # text = Expression of v-src in T cells correlates with nuclear expression of NF-kappa B. NF-kappa B is a rapidly inducible transcriptional activator that responds to a variety of signals and influences the expression of many genes involved in the immune response. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 v- v- SYM NFP _ _ _ _ SpaceAfter=No 4 src src NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 rapidly rapidly ADV RB _ _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activator activator NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 variety variety NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 signals signal NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 many many ADJ JJ Degree=Pos _ _ _ _ 41 genes gene NOUN NNS Number=Plur _ _ _ _ 42 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 immune immune ADJ JJ Degree=Pos _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3292 # text = Protein tyrosine kinases transmit signals from cytokine and immune receptors. 1 Protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 2 tyrosine tyrosine PRON PRP _ _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 transmit transmit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3293 # text = Very little information exists linking these two important classes of signaling molecules. 1 Very very ADV RB _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 information information NOUN NN Number=Sing _ _ _ _ 4 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 linking link VERB VBG VerbForm=Ger _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 classes class NOUN NNS Number=Plur _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3294 # text = We now demonstrate that v-src expression correlates with nuclear expression of a kappa B binding complex similar to that induced by phorbol ester and ionomycin, as detected by electrophoretic mobility shift assay using a variety of kappa B sites. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 v- v- SYM NFP _ _ _ _ SpaceAfter=No 6 src src ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 binding binde VERB VBG VerbForm=Ger _ _ _ _ 17 complex complex ADJ JJ Degree=Pos _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 24 ester ester NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 shift shift NOUN NN Number=Sing _ _ _ _ 34 assay assay NOUN NN Number=Sing _ _ _ _ 35 using use VERB VBG VerbForm=Ger _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 variety variety NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3295 # text = This complex was blocked by the tyrosine kinase inhibitor, herbimycin A. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 complex complex NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3296 # text = The v-src-induced complex comprised the p50 and p65 components of NF-kappa B, as determined by supershift and immunoblot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 src-induced src-induce ADJ JJ Degree=Pos _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ _ 5 comprised comprise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 p50 p50 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ _ 10 components component NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 supershift supershift NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 23 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3297 # text = As a functional correlate of this finding, transient co-transfection of HIV-1 LTR reporter constructs in a different T cell line demonstrated that v-src activated this promoter in a kappa B-dependent manner. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 correlate correlate NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 finding finding NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr ADJ JJR Degree=Cmp _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 v- v- SYM NFP _ _ _ _ SpaceAfter=No 27 src src NOUN NN Number=Sing _ _ _ _ 28 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3298 # text = We found that transactivation of the HIV-1 LTR by v-src was more sensitive to mutations of the proximal, rather than the distal, kappa B element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 LTR Ltr NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 v- v- SYM NFP _ _ _ _ SpaceAfter=No 13 src src NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 mutations mutation NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proximal proximal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 rather rather ADV RB _ _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 distal distal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 kappa kappa ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3299 # text = The implications for T cell receptor signaling and HIV-1 gene expression are considered. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implications implication NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3300 # text = Document 003001216 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001216 003001216 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3301 # text = Comparison of constitutive and inducible transcriptional enhancement mediated by kappa B-related sequences: modulation of activity in B cells by human T-cell leukemia virus type I tax gene. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- SYM SYM _ _ _ _ SpaceAfter=No 12 related relate ADJ JJ Degree=Pos _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 modulation modulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 tax tax NOUN NN Number=Sing _ _ _ _ 30 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3302 # text = The kappa B sequence (GGGACTTTCC) binds a factor, NF-kappa B, that is constitutively found in its functional, DNA binding form only in B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 GGGACTTTCC GGGACTTTCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 form from NOUN NN Number=Sing _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3303 # text = A factor with apparently indistinguishable sequence specificity can be induced in many other cell types, where it is used to regulate inducible gene expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 apparently apparently ADV RB _ _ _ _ _ 5 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 many many ADJ JJ Degree=Pos _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3304 # text = For example, kappa B-related sequences have been shown to be important for the transcription of a few inducible genes, such as the interleukin 2 receptor alpha-chain gene and the beta-interferon gene. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B- B- PUNCT : _ _ _ _ SpaceAfter=No 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 few few ADJ JJ Degree=Pos _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 interferon interferon NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3305 # text = However, these genes are not constitutively active in B lymphocytes, suggesting that other regulatory mechanisms must play a role in determining the patterns of expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 must must AUX MD VerbForm=Fin _ _ _ _ 19 play play VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 determining determine VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 patterns pattern NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3306 # text = We have investigated the constitutive and inducible transcriptional activity mediated by five kappa B-related sequence elements in two different cell types. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 five five NUM CD NumType=Card _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B- B- SYM SYM _ _ _ _ SpaceAfter=No 15 related related ADJ JJ Degree=Pos _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3307 # text = We show that in S194 plasma cells the activity of each element correlates well with the relative affinity of B-cell-derived NF-kappa B for that element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 S194 S194 NUM CD NumType=Card _ _ _ _ 6 plasma plasma NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 each each DET DT _ _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 relative relative ADJ JJ Degree=Pos _ _ _ _ 18 affinity affinity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3308 # text = This leads to significantly lower transcription enhancement by sites derived from the interleukin 2 receptor or T-cell receptor genes in S194 cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 lower lower VERB VB VerbForm=Inf _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 S194 S194 PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3309 # text = However, in either EL-4 (T) cells or S194 cells, both lower-affinity sites can be significantly induced by the tax gene product of human T-cell leukemia virus type I, showing that NF-kappa B activity can be modulated even in a B-cell line that constitutively expresses this factor. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 either either DET DT _ _ _ _ _ 5 EL EL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 T t NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 S194 S194 NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 lower lower ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 significantly significantly ADV RB _ _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 tax tax NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 product product NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 35 virus virus NOUN NN Number=Sing _ _ _ _ 36 type type NOUN NN Number=Sing _ _ _ _ 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 showing show VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 can can AUX MD VerbForm=Fin _ _ _ _ 47 be be AUX VB VerbForm=Inf _ _ _ _ 48 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 even even ADV RB _ _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 cell cell NOUN NN Number=Sing _ _ _ _ 55 line line NOUN NN Number=Sing _ _ _ _ 56 that that PRON WDT PronType=Rel _ _ _ _ 57 constitutively constitutively ADV RB _ _ _ _ _ 58 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 59 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 60 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3310 # text = Document 003001217 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001217 003001217 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3311 # text = Cell-specific differences in activation of NF-kappa B regulatory elements of human immunodeficiency virus and beta interferon promoters by tumor necrosis factor. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 interferon interferon ADP IN _ _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3312 # text = Three aspects of the involvement of tumor necrosis factor in human immunodeficiency virus (HIV) pathogenesis were examined. 1 Three three NUM CD NumType=Card _ _ _ _ 2 aspects aspect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3313 # text = Tumor necrosis factor alpha (TNF-alpha) mRNA production was analyzed by polymerase chain reaction amplification in monocytic U937 cells and in a chronically HIV infected U937 cell line (U9-IIIB). 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 reaction reaction NOUN NN Number=Sing _ _ _ _ 18 amplification amplification NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 chronically chronically ADV RB _ _ _ _ _ 27 HIV haHive AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 U9- u9- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 IIIB Iiib NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3314 # text = TNF-alpha RNA was undetectable in U937 cells, whereas a low constitutive level was detected in U9-IIIB cells. 1 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 RNA RNa PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas whereas SCONJ IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U9- U9- SYM NFP _ _ _ _ SpaceAfter=No 20 IIIB Iiib ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3315 # text = Paramyxovirus infection induced a 5- to 10-fold increase in the steady-state level of TNF-alpha RNA in U9-IIIB cells compared with U937 cells, suggesting that HIV-infected monocytic cells produced higher levels of TNF-alpha than did normal cells after a secondary virus infection. 1 Paramyxovirus Paramyxovirus NOUN NN Number=Sing _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 fold fold NOUN NN Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 state state NOUN NN Number=Sing _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 U9 U9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 IIIB IIIB PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 U937 U937 NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 36 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 higher higher ADJ JJR Degree=Cmp _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 alpha alpha PROPN NNP Number=Sing _ _ _ _ 46 than than ADP IN _ _ _ _ _ 47 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 normal normal ADJ JJ Degree=Pos _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 after after ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 53 virus virus NOUN NN Number=Sing _ _ _ _ 54 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 3316 # text = The effects of TNF-alpha on gene expression were examined by transient expression assays using reporter chloramphenicol acetyltransferase plasmids linked to regulatory elements from the HIV long terminal repeat (LTR) and the beta interferon promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 19 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 20 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 21 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ _ 28 long long ADJ JJ Degree=Pos _ _ _ _ 29 terminal terminal NOUN NN Number=Sing _ _ _ _ 30 repeat repeat NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 beta beta NOUN NN Number=Sing _ _ _ _ 37 interferon interferon ADP IN _ _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3317 # text = In U937 and Jurkat T lymphoid cells, the inducibility of the different hybrid promoters by TNF-alpha or phorbol ester varied in a cell type- and promoter context-specific manner; the levels of gene activity of NF-kappa B-containing plasmids correlated directly with induction of NF-kappa B DNA-binding activity. 1 In in ADP IN _ _ _ _ _ 2 U937 U937 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 22 ester ester NOUN NN Number=Sing _ _ _ _ 23 varied vary VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 gene gene ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 containing contain VERB VBG VerbForm=Ger _ _ _ _ 48 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 49 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 directly directly ADV RB _ _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 induction induction NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 kappa kappa PROPN NNP Number=Sing _ _ _ _ 57 B b PROPN NNP Number=Sing _ _ _ _ 58 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 binding binding VERB VBG VerbForm=Ger _ _ _ _ 61 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3318 # text = Although the intact beta interferon promoter was only weakly stimulated by phorbol ester or TNF-alpha, multimers of the PRDII NF-kappa B-binding domain were inducible by both agents. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 intact intact NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 interferon interferon NOUN NN Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 weakly weakly ADV RB _ _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 ester ester NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 multimers multimer NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 PRDII PRDII PROPN NNP Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 domain domain NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3319 # text = TNF-alpha was able to increase expression of the HIV LTR in T cells, but in monocytic cells, TNF-alpha did not induce the HIV LTR above a constitutive level of activity. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 increase increase VERB VB VerbForm=Inf _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 LTR LTR PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ _ 30 LTR LTR PROPN NNP Number=Sing _ _ _ _ 31 above above ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3320 # text = This level of NF-kappa B-independent activity appears to be sufficient for virus multiplication, since TNF-alpha treatment had no effect on the kinetics of de novo HIV type 1 (HIV-1) infection and viral RNA production in U937 cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 independent independent ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 multiplication multiplication NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 since since SCONJ IN _ _ _ _ _ 20 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 no no DET DT _ _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 de de PROPN NNP Number=Sing _ _ _ _ 32 novo novo PROPN NNP Number=Sing _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ _ 34 type type NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 infection infection NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 viral viral ADJ JJ Degree=Pos _ _ _ _ 44 RNA RNa PROPN NNP Number=Sing _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 U937 U937 NUM CD NumType=Card _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3321 # text = However, in Jurkat cells, TNF-alpha dramatically enhanced the spread of HIV-1 through the cell population and increased viral RNA synthesis, indicating that in T cells HIV-1 multiplication was stimulated by TNF-alpha treatment. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 dramatically dramatically ADV RB _ _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 spread spread NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 population population NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 RNA RNa NOUN NN Number=Sing _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 multiplication multiplication NOUN NN Number=Sing _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 alpha alpha ADP IN _ _ _ _ _ 43 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3322 # text = Document 003001218 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001218 003001218 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3323 # text = Polymorphic nucleotides within the human IL-4 promoter that mediate overexpression of the gene. 1 Polymorphic Polymorphic ADJ JJ Degree=Pos _ _ _ _ 2 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 3 within within ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 mediate mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3324 # text = Atopy, which predisposes individuals to develop asthma, severe systemic anaphylaxis, and atopic dermatitis, is usually associated with dramatically elevated total serum IgE levels and is thought to be controlled by a major susceptibility gene and multiple minor susceptibility genes. 1 Atopy Atopy INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 predisposes predispose VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 individuals individual NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 develop develop VERB VB VerbForm=Inf _ _ _ _ 8 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 severe severe ADJ JJ Degree=Pos _ _ _ _ 11 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 12 anaphylaxis anaphylaxis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 16 dermatitis dermatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 usually usually ADV RB _ _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 dramatically dramatically ADV RB _ _ _ _ _ 23 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 total total ADJ JJ Degree=Pos _ _ _ _ 25 serum serum NOUN NN Number=Sing _ _ _ _ 26 IgE Ige NOUN NN Number=Sing _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 major major ADJ JJ Degree=Pos _ _ _ _ 37 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 41 minor minor ADJ JJ Degree=Pos _ _ _ _ 42 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 43 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3325 # text = A recent sib-pair analysis revealed a tight linkage between markers on 5q31.1 and a major susceptibility gene controlling total serum IgE levels. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 sib-pair sib-pair ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tight tight ADJ JJ Degree=Pos _ _ _ _ 8 linkage linkage NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 markers marker NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 5q31.1 5q31.1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 controlling control VERB VBG VerbForm=Ger _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ _ 21 IgE Ige NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3326 # text = Due to its location within this cluster and its biologic role in Ig class switching and Th2 cell differentiation, the IL-4 gene has emerged as one major candidate for the atopy gene. 1 Due due ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 location location NOUN NN Number=Sing _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 cluster cluster NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Ig ig PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 switching switching VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 emerged emerge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ _ 30 major major ADJ JJ Degree=Pos _ _ _ _ 31 candidate candidate NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 atopy atopy ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3327 # text = In one model, polymorphisms within IL-4 regulatory elements might result in overexpression of the gene, amplifying Th2 cell differentiation and class switching to IgE. 1 In in ADP IN _ _ _ _ _ 2 one one NUM CD NumType=Card _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 result result VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 amplifying amplify VERB VBG VerbForm=Ger _ _ _ _ 21 Th2 Th2 NUM CD NumType=Card _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 switching switch VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3328 # text = In support of this model, we report that the human IL-4 promoter exists in multiple allelic forms that exhibit distinct transcriptional activities in IL-4-positive T cells. 1 In in ADP IN _ _ _ _ _ 2 support support NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 20 forms form NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 exhibit exhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3329 # text = A particular allele has an unusually high transcriptional activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ _ 3 allele allele NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 unusually unusually ADV RB _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3330 # text = A nucleotide substitution within a recently described OAP40 element located just upstream of an NF-AT site (P sequence) appears to be largely responsible for the increased promotor strength of this particular allelic form of the IL-4 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 3 substitution substitution NOUN NN Number=Sing _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 recently recently ADV RB _ _ _ _ _ 7 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 OAP40 OAP40 NUM CD NumType=Card _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 just just ADV RB _ _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT at PROPN NNP Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 P p NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 largely largely ADV RB _ _ _ _ _ 27 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 promotor promotor NOUN NN Number=Sing _ _ _ _ 32 strength strength NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 particular particular ADJ JJ Degree=Pos _ _ _ _ 36 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 37 form form NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3331 # text = In EMSAs, this substitution results in a markedly enhanced affinity for sequence-specific complexes exhibiting an AP-1 specificity. 1 In in ADP IN _ _ _ _ _ 2 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 substitution substitution NOUN NN Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 exhibiting exhibit VERB VBG VerbForm=Ger _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3332 # text = The identification of allelic nucleotides, which results in overexpression of the IL-4 gene, provides specific targets for a comprehensive screening of atopic and nonatopic individuals and may provide a clue for genetic predisposition for atopy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 5 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which DET WDT PronType=Int _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 targets target NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 comprehensive comprehensive ADJ JJ Degree=Pos _ _ _ _ 24 screening screening NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 29 individuals individual NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 provide provide VERB VB VerbForm=Inf _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 clue clue NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 37 predisposition predisposition NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 atopy atopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3333 # text = Document 003001219 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001219 003001219 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3334 # text = Comparative analysis of NFAT (nuclear factor of activated T cells) complex in human T and B lymphocytes. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3335 # text = Nuclear factor of activated T cells (NFAT) is a transcriptional activator that binds to sequences in the interleukin-2 (IL-2) promoter and is thought to be largely responsible for the T cell-specific inducibility of IL-2 expression. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 sequences sequence NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 largely largely ADV RB _ _ _ _ _ 35 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 T T PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3336 # text = Electrophoretic mobility shift assays (EMSA) showed that specific NFAT binding activity could also be induced in human B cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 NFAT Nfat SCONJ IN _ _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3337 # text = The B cell NFAT complex, however, was not functional, since it failed to activate transcription from an NFAT-driven chloramphenicol acetyltransferase (CAT) construct. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 however however ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 activate activate VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 25 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3338 # text = Competition with an AP-1 motif or with anti-Jun and anti-Fos antibodies abolished binding to the NFAT motif in both T and B cells, indicating that Jun and Fos are critical for NFAT complex formation in both cell types. 1 Competition competition NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 motif motif NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti-Jun anti-Jun ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 anti-Fos anti-Fos ADJ JJ Degree=Pos _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 19 motif motif NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 Jun Jun PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Fos Fos PROPN NNPS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 critical critical ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 36 complex complex ADJ JJ Degree=Pos _ _ _ _ 37 formation formation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3339 # text = Purified recombinant Jun and Fos proteins failed to bind directly to the NFAT motif. 1 Purified Purify ADJ JJ Degree=Pos _ _ _ _ 2 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 3 Jun Jun PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Fos Fos PROPN NNP Number=Sing _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 directly directly ADV RB _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3340 # text = However, when combined with unstimulated B or T cell extracts, full-length, but not truncated, Jun/Fos heterodimers were able to form an NFAT complex, indicating the presence of a constitutively expressed nuclear factor(s) in B and T cells necessary for the formation of the NFAT complex in both cell types. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell PROPN NNP Number=Sing _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 length length NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Jun/ Jun/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 22 Fos Fos PROPN NNP Number=Sing _ _ _ _ 23 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 able able ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 form form VERB VB VerbForm=Inf _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 30 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 presence presence NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 constitutively constitutively ADV RB _ _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 s s X AFX _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 B b PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 50 for for ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 formation formation NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 56 complex complex NOUN NN Number=Sing _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 both both DET DT _ _ _ _ _ 59 cell cell NOUN NN Number=Sing _ _ _ _ 60 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3341 # text = An NFAT oligonucleotide carrying mutations in the 5' purine-rich part of the NFAT sequence failed to form a complex and to compete with the wild type motif for NFAT complex formation in both T and B cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 3 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 4 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' 's PUNCT `` _ _ _ _ _ 10 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 rich rich ADJ JJ Degree=Pos _ _ _ _ 13 part part NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 form form VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 compete compete VERB VB VerbForm=Inf _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 wild wild NOUN NN Number=Sing _ _ _ _ 29 type type NOUN NN Number=Sing _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 33 complex complex ADJ JJ Degree=Pos _ _ _ _ 34 formation formation NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 both both CCONJ CC _ _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3342 # text = We therefore propose a model whereby a core NFAT complex consisting of Jun, Fos, and a constitutive nuclear factor is formed in both T and B cells, but an additional factor and/or post-translational modification of a factor, missing in B cells, might be required for transactivation by NFAT. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 whereby whereby ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 additional additional ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 or or CCONJ CC _ _ _ _ _ 38 post-translational post-translational ADJ JJ Degree=Pos _ _ _ _ 39 modification modification NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 missing missing VERB VBG VerbForm=Ger _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 B b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 might might AUX MD VerbForm=Fin _ _ _ _ 50 be be AUX VB VerbForm=Inf _ _ _ _ 51 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 for for ADP IN _ _ _ _ _ 53 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3343 # text = Document 003001220 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001220 003001220 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3344 # text = Distinctive gene expression patterns in human mammary epithelial cells and breast cancers. 1 Distinctive Distinctive ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 patterns pattern NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 8 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 breast breast NOUN NN Number=Sing _ _ _ _ 12 cancers cancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3345 # text = cDNA microarrays and a clustering algorithm were used to identify patterns of gene expression in human mammary epithelial cells growing in culture and in primary human breast tumors. 1 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 2 microarrays microarray NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 clustering clustering NOUN NN Number=Sing _ _ _ _ 6 algorithm algorithm NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 identify identify VERB VB VerbForm=Inf _ _ _ _ 11 patterns pattern NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 18 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 growing grow VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 culture culture NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 breast breast NOUN NN Number=Sing _ _ _ _ 28 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3346 # text = Clusters of coexpressed genes identified through manipulations of mammary epithelial cells in vitro also showed consistent patterns of variation in expression among breast tumor samples. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 manipulations manipulation NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 17 patterns pattern NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 variation variation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 among among ADP IN _ _ _ _ _ 23 breast breast NOUN NN Number=Sing _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3347 # text = By using immunohistochemistry with antibodies against proteins encoded by a particular gene in a cluster, the identity of the cell type within the tumor specimen that contributed the observed gene expression pattern could be determined. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 particular particular ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cluster cluster NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 identity identity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 specimen speciman NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 contributed contribute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 observed observed ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 pattern pattern NOUN NN Number=Sing _ _ _ _ 34 could could AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3348 # text = Clusters of genes with coherent expression patterns in cultured cells and in the breast tumors samples could be related to specific features of biological variation among the samples. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 coherent coherent ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 patterns pattern NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 breast breast NOUN NN Number=Sing _ _ _ _ 15 tumors tumor NOUN NNS Number=Plur _ _ _ _ 16 samples sample NOUN NNS Number=Plur _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 features feature NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 biological biological ADJ JJ Degree=Pos _ _ _ _ 25 variation variation NOUN NN Number=Sing _ _ _ _ 26 among among ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3349 # text = Two such clusters were found to have patterns that correlated with variation in cell proliferation rates and with activation of the IFN-regulated signal transduction pathway, respectively. 1 Two two NUM CD NumType=Card _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 clusters cluster NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 have have VERB VB VerbForm=Inf _ _ _ _ 8 patterns pattern NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 variation variation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 rates rate NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3350 # text = Clusters of genes expressed by stromal cells and lymphocytes in the breast tumors also were identified in this analysis. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 breast breast NOUN NN Number=Sing _ _ _ _ 13 tumors tumor NOUN NNS Number=Plur _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3351 # text = These results support the feasibility and usefulness of this systematic approach to studying variation in gene expression patterns in human cancers as a means to dissect and classify solid tumors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 feasibility feasibility NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 usefulness usefulness NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 systematic systematic ADJ JJ Degree=Pos _ _ _ _ 11 approach approach NOUN NN Number=Sing _ _ _ _ 12 to to SCONJ IN _ _ _ _ _ 13 studying study VERB VBG VerbForm=Ger _ _ _ _ 14 variation variation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 patterns pattern NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 cancers cancer NOUN NNS Number=Plur _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 means means NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 dissect dissect VERB VB VerbForm=Inf _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 classify classify VERB VB VerbForm=Inf _ _ _ _ 29 solid solid ADJ JJ Degree=Pos _ _ _ _ 30 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3352 # text = Document 003001221 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001221 003001221 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3353 # text = Association between expression of intercellular adhesion molecule-1 and integration of human T-cell-leukemia virus type 1 in adult T-cell leukemia cells. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 integration integration NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -leukemia -leukemia NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 adult adult ADJ JJ Degree=Pos _ _ _ _ 22 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3354 # text = It is known that the expression levels of intercellular adhesion molecule-1 (ICAM-1) in adult T cell leukemia(ATL) cells are high, whereas those in T-lymphoid cells are not. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 adult adult ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ _ 23 leukemia leukemia PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 T- T- SYM NFP _ _ _ _ SpaceAfter=No 35 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3355 # text = In order to investigate the factors that influence the induction of ICAM-1 molecules, Northern blot analysis to measure the expression level of ICAM-1 mRNAs and Southern blot hybridization to analyze the integration of human T-cell-leukemia virus type 1 (HTLV-1) provirus were done. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 influence influence VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 18 blot blot ADJ JJ Degree=Pos _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 measure measure VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Southern Southern ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ _ 33 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 integration integration NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 T-cell T-cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 43 virus virus NOUN NN Number=Sing _ _ _ _ 44 type type NOUN NN Number=Sing _ _ _ _ 45 1 1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 provirus provirus NOUN NN Number=Sing _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 done do VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3356 # text = The levels of ICAM-1 mRNA expression of ATL cells were generally higher than those of T-lymphoid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 generally generally ADV RB _ _ _ _ _ 14 higher higher ADJ JJR Degree=Cmp _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T- T- SYM NFP _ _ _ _ SpaceAfter=No 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3357 # text = However, ILT-mat cells and ATL16T(-) cells, although they were ATL cells, showed rather low surface ICAM-1 expression and ICAM-1 mRNA expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ILT ILT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mat mat ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 ATL16T Atl16t NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 -) -) PUNCT . _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 although although SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 rather rather ADV RB _ _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3358 # text = Southern blot hybridization showed that only two and four bands were found in ILT-mat and ATL16T(-) cells, respectively, whereas > 10 bands were detected in other ATL cells. 1 Southern southern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 four four NUM CD NumType=Card _ _ _ _ 10 bands band NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 ILT ILT ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mat mat NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 ATL16T Atl16t NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 -) -) PUNCT . _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas NOUN NNS Number=Plur _ _ _ _ 26 > > PUNCT , _ _ _ _ _ 27 10 10 NUM CD NumType=Card _ _ _ _ 28 bands band NOUN NNS Number=Plur _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3359 # text = These results suggest that monoclonal integration of HTLV-1 provirus to the genome of T cell, especially the number of integration sites, is one of the factors for induction of ICAM-1 molecules. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 6 integration integration NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 provirus provirus NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 genome genome NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 especially especially ADV RB _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 number number NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 integration integration NOUN NN Number=Sing _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 one one NUM CD NumType=Card _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3360 # text = Document 003001222 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001222 003001222 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3361 # text = Induction of nuclear factor kappa B/Rel nuclear activity in human peripheral blood T lymphocytes by anti-HLA class I monoclonal antibodies. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 Rel Rel PROPN NNP Number=Sing _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 anti-HLA anti-hla ADJ JJ Degree=Pos _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 22 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3362 # text = Monoclonal antibodies against either monomorphic or polymorphic determinants of class I antigen induced in PBMC and highly purified T lymphocytes the nuclear activity of NF-kappa B/Rel complexes. 1 Monoclonal Monoclonal ADJ JJ Degree=Pos _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 against against ADP IN _ _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 monomorphic monomorphic ADJ JJ Degree=Pos _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 8 determinants determinant NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 antigen antigen NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 highly highly ADV RB _ _ _ _ _ 18 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Rel Rel NOUN NN Number=Sing _ _ _ _ 31 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3363 # text = These included both p50/p50 and p50/p65 dimers, recognized by specific antibodies in EMSA. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 p50/p50 p50/p50 NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p65 p65 NOUN NN Number=Sing _ _ _ _ 9 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3364 # text = The induced complexes were detectable in extracts of cells incubated with anti-class I monoclonal antibody (mAb) for 1.5 h; the induction was maximal at 5 h, persistent at 16 h and no longer observed at 40 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induced induced ADJ JJ Degree=Pos _ _ _ _ 3 complexes complexe NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 anti-class anti-class NOUN NN Number=Sing _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 15 antibody antibody NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 1.5 1.5 NUM CD NumType=Card _ _ _ _ 21 h h INTJ UH _ _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 5 5 NUM CD NumType=Card _ _ _ _ 29 h h ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 16 16 NUM CD NumType=Card _ _ _ _ 34 h h NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 no no ADV RB _ _ _ _ _ 37 longer longer ADV RBR Degree=Cmp _ _ _ _ 38 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 at at ADP IN _ _ _ _ _ 40 40 40 NUM CD NumType=Card _ _ _ _ 41 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3365 # text = The mAb failed to induce NF-kappa B/Rel nuclear activity in cells incubated in the presence of 3,4-dichloroisocoumarin, an inhibitor of I kappa B-alpha degradation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mAb mAb PROPN NNP Number=Sing _ _ _ _ 3 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 3,4 3,4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -dichloroisocoumarin -dichloroisocoumarin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B- B- SYM NFP _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3366 # text = Together, these results suggest that class I triggering can induce the activity of NF-kappa 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 3367 # text = B/Rel nuclear activity in peripheral blood T lymphocytes, thereby modulating the expression of genes regulated by these transcription factors. 1 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel PROPN NNP Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 T t NOUN NN Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 thereby thereby ADV RB _ _ _ _ _ 13 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3368 # text = Document 003001223 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001223 003001223 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3369 # text = Regulation of gene expression at early stages of B-cell and T-cell differentiation. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 stages stage NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3370 # text = The expression of distinct sets of genes at different stages of B-lymphocyte and T-lymphocyte differentiation is controlled at the level of transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 sets set NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 stages stage NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3371 # text = A number of recent studies have described interactions between transcription factors in lymphocytes that provide new insights into mechanisms regulating gene expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 recent recent ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 new new ADJ JJ Degree=Pos _ _ _ _ 17 insights insight NOUN NNS Number=Plur _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3372 # text = These mechanisms include the assembly of higher order nucleoprotein complexes and other protein-protein interactions that enhance the functional specificity of transcriptional regulators in lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 assembly assembly NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 higher higher ADJ JJR Degree=Cmp _ _ _ _ 8 order order NOUN NN Number=Sing _ _ _ _ 9 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 interactions interaction NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 specificity specificity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 regulators regulator NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3373 # text = Document 003001224 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001224 003001224 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3374 # text = Oleic acid inhibits endothelial activation : 1 Oleic Oleic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 : : PUNCT : _ _ _ _ _ # sent_id = 3375 # text = A direct vascular antiatherogenic mechanism of a nutritional component in the mediterranean diet. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 4 antiatherogenic antiatherogenic ADJ JJ Degree=Pos _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 nutritional nutritional ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mediterranean mediterranean ADJ JJ Degree=Pos _ _ _ _ 13 diet diet NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3376 # text = Because oleic acid is implicated in the antiatherogenic effects attributed to the Mediterranean diet, we investigated whether this fatty acid can modulate endothelial activation, ie, the concerted expression of gene products involved in leukocyte recruitment and early atherogenesis. 1 Because because SCONJ IN _ _ _ _ _ 2 oleic oleic ADJ JJ Degree=Pos _ _ _ _ 3 acid acid NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 antiatherogenic antiatherogenic ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 attributed attribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Mediterranean Mediterranean PROPN NNP Number=Sing _ _ _ _ 14 diet diet NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 whether whether SCONJ IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 fatty fatty NOUN NN Number=Sing _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 ie ie X FW _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 concerted concerted ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 products product NOUN NNS Number=Plur _ _ _ _ 35 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 38 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 early early ADJ JJ Degree=Pos _ _ _ _ 41 atherogenesis atherogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3377 # text = We incubated sodium oleate with human umbilical vein endothelial cells for 0 to 72 hours, followed by coincubation of oleate with human recombinant tumor necrosis factor, interleukin (IL)-1alpha, IL-1beta, IL-4, Escherichia coli lipopolysaccharide (LPS), or phorbol 12-myristate 13-acetate for a further 6 to 24 hours. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 incubated incubate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 sodium sodium NOUN NN Number=Sing _ _ _ _ 4 oleate oleate ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 8 vein vein NOUN NN Number=Sing _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 0 0 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 72 72 NUM CD NumType=Card _ _ _ _ 15 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 coincubation coincubation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 oleate oleate NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 46 coli coli NOUN NN Number=Sing _ _ _ _ 47 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 or or CCONJ CC _ _ _ _ _ 53 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 54 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 myristate myristate NOUN NN Number=Sing _ _ _ _ 57 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 acetate acetate NOUN NN Number=Sing _ _ _ _ 60 for for ADP IN _ _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 further further ADJ JJ Degree=Pos _ _ _ _ 63 6 6 NUM CD NumType=Card _ _ _ _ 64 to to ADP IN _ _ _ _ _ 65 24 24 NUM CD NumType=Card _ _ _ _ 66 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 3378 # text = The endothelial expression of vascular cell adhesion molecule-1 (VCAM-1), E-selectin, and intercellular adhesion molecule-1 was monitored by cell surface enzyme immunoassays or flow cytometry, and steady-state levels of VCAM-1 mRNA were assessed by Northern blot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 E- E- PUNCT : _ _ _ _ SpaceAfter=No 18 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 32 immunoassays immunoassay NOUN NNS Number=Plur _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 flow flow NOUN NN Number=Sing _ _ _ _ 35 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 state state NOUN NN Number=Sing _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 Northern northern ADJ JJ Degree=Pos _ _ _ _ 51 blot blot NOUN NN Number=Sing _ _ _ _ 52 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3379 # text = At 10 to 100 micromol/L for >24 hours, oleate inhibited the expression of all adhesion molecules tested. 1 At at ADP IN _ _ _ _ _ 2 10 10 NUM CD NumType=Card _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 100 100 NUM CD NumType=Card _ _ _ _ 5 micromol/L micromol/l NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 > > SYM NFP _ _ _ _ SpaceAfter=No 8 24 24 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 oleate oleate ADJ JJ Degree=Pos _ _ _ _ 12 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3380 # text = After a 72-hour incubation with oleate and a further 16-hour incubation with oleate plus 1 microg/mL LPS, VCAM-1 expression was reduced by >40% compared with control. 1 After after ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 hour hour NOUN NN Number=Sing _ _ _ _ 6 incubation incubation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 oleate oleate NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 further further ADJ JJ Degree=Pos _ _ _ _ 12 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 hour hour NOUN NN Number=Sing _ _ _ _ 15 incubation incubation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 oleate oleate NOUN NN Number=Sing _ _ _ _ 18 plus plus CCONJ CC _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 mL mL PROPN NNP Number=Sing _ _ _ _ 23 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 > > SYM $ _ _ _ _ SpaceAfter=No 33 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 % % SYM NN Number=Sing _ _ _ _ 35 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3381 # text = Adhesion of monocytoid U937 cells to LPS-treated endothelial cells was reduced concomitantly. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 concomitantly concomitantly ADV RB _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3382 # text = Oleate also produced a quantitatively similar reduction of VCAM-1 mRNA levels on Northern blot analysis and inhibited nuclear factor-kappaB activation on electrophoretic mobility shift assays. 1 Oleate Oleate PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 quantitatively quantitatively ADV RB _ _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 reduction reduction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 16 blot blot NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappab NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 27 mobility mobility NOUN NN Number=Sing _ _ _ _ 28 shift shift NOUN NN Number=Sing _ _ _ _ 29 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3383 # text = Incubation of endothelial cells with oleate for 72 hours decreased the relative proportions of saturated (palmitic and stearic) acids in total cell lipids and increased the proportions of oleate in total cell lipids without significantly changing the relative proportions of polyunsaturated fatty acids. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 oleate oleate NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 72 72 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 relative relative ADJ JJ Degree=Pos _ _ _ _ 13 proportions proportion NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 saturated saturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 palmitic palmitic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 stearic stearic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 acids acid NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 total total ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lipids lipid NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proportions proportion NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 oleate oleate NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 total total ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lipids lipid NOUN NNS Number=Plur _ _ _ _ 36 without without SCONJ IN _ _ _ _ _ 37 significantly significantly ADV RB _ _ _ _ _ 38 changing change VERB VBG VerbForm=Ger _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 relative relative ADJ JJ Degree=Pos _ _ _ _ 41 proportions proportion NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 polyunsaturated polyunsaturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 fatty fatty NOUN NN Number=Sing _ _ _ _ 45 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3384 # text = Although less potent than polyunsaturated fatty acids in inhibiting endothelial activation, oleic acid may contribute to the prevention of atherogenesis through selective displacement of saturated fatty acids in cell membrane phospholipids and a consequent modulation of gene expression for molecules involved in monocyte recruitment. 1 Although although SCONJ IN _ _ _ _ _ 2 less less ADJ JJS Degree=Sup _ _ _ _ 3 potent potent NOUN NN Number=Sing _ _ _ _ 4 than than ADP IN _ _ _ _ _ 5 polyunsaturated polyunsaturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 fatty fatty NOUN NN Number=Sing _ _ _ _ 7 acids acid NOUN NNS Number=Plur _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 oleic oleic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 prevention prevention NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 displacement displacement NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 saturated saturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 fatty fatty NOUN NN Number=Sing _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 membrane membrane NOUN NN Number=Sing _ _ _ _ 32 phospholipids phospholipid NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 36 modulation modulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 molecules molecule NOUN NNS Number=Plur _ _ _ _ 42 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 45 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3385 # text = Document 003001225 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001225 003001225 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3386 # text = Activation of a novel gene in 3q21 and identification of intergenic fusion transcripts with ecotropic viral insertion site I in leukemia. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 3q21 3q21 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 identification identification NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 intergenic intergenic ADJ JJ Degree=Pos _ _ _ _ 12 fusion fusion NOUN NN Number=Sing _ _ _ _ 13 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 ecotropic ecotropic ADJ JJ Degree=Pos _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 insertion insertion NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3387 # text = We have identified a novel gene, GR6, located within the leukemia breakpoint region of 3q21, that is normally expressed in early fetal development but not in adult peripheral blood. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 GR6 Gr6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 breakpoint breakpoint NOUN NN Number=Sing _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 3q21 3q21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 early early ADJ JJ Degree=Pos _ _ _ _ 25 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 adult adult ADJ JJ Degree=Pos _ _ _ _ 31 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 32 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3388 # text = GR6 is activated in the UCSD-AML1 cell line and in a leukemic sample, both of which carry a t(3;3)(q21;q26). 1 GR6 Gr6 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 UCSD Ucsd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 AML1 Aml1 NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 15 sample sample NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 carry carry VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 3;3 3;3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 q21;q26 q21;q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3389 # text = In UCSD-AML1, we have also identified fusion transcripts between the ecotropic viral insertion site I (EVI1) gene in 3q26 and GR6 and between EVI1 and Ribophorin I that maps 30 kb telomeric to GR6 in 3q21. 1 In in ADP IN _ _ _ _ _ 2 UCSD UCSD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ecotropic ecotropic ADJ JJ Degree=Pos _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 insertion insertion NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 EVI1 EVI1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 3q26 3q26 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 GR6 GR6 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Ribophorin Ribophorin PROPN NNP Number=Sing _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 maps map VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 30 30 NUM CD NumType=Card _ _ _ _ 36 kb kb NOUN NN Number=Sing _ _ _ _ 37 telomeric telomeric NOUN NN Number=Sing _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 GR6 GR6 NUM CD NumType=Card _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 3q21 3q21 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3390 # text = All fusions splice the 5' ends of the 3q21 genes into exon 2 of the EVI1 gene, an event that is similar to the normal intergenic splicing of MDS1-EVI1 and to those previously documented in leukemias with t(3;21) and t(3;12), in which acute myelogenous leukemia 1-EVI1 fusions and ETV6-EVI1 fusions, respectively, occur. 1 All all DET DT _ _ _ _ _ 2 fusions fusion NOUN NNS Number=Plur _ _ _ _ 3 splice splice VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' 's PUNCT `` _ _ _ _ _ 7 ends end NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 3q21 3q21 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 exon exon NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 18 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 event event NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 intergenic intergenic ADJ JJ Degree=Pos _ _ _ _ 29 splicing splicing NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 MDS Md NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 EVI1 EVI1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 38 previously previously ADV RB _ _ _ _ _ 39 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 leukemias leukemias NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 t( t( SYM NFP _ _ _ _ SpaceAfter=No 44 3;21 3;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 3;12 3;12 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 which which PRON WDT PronType=Rel _ _ _ _ 54 acute acute ADJ JJ Degree=Pos _ _ _ _ 55 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 56 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 57 1- 1- SYM SYM _ _ _ _ SpaceAfter=No 58 EVI1 Evi1 NUM CD NumType=Card _ _ _ _ 59 fusions fusion NOUN NNS Number=Plur _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 ETV6 ETV6 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 -EVI1 -evi1 NOUN NN Number=Sing _ _ _ _ 63 fusions fusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 occur occur NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 3391 # text = The Ribophorin I-EVI1 fusion in particular may be a common occurrence in t(3;3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ribophorin Ribophorin PROPN NNP Number=Sing _ _ _ _ 3 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 particular particular ADJ JJ Degree=Pos _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3392 # text = Document 003001226 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001226 003001226 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3393 # text = Human immunodeficiency virus type 1 long terminal repeat quasispecies differ in basal transcription and nuclear factor recruitment in human glial cells and lymphocytes. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 long long ADJ JJ Degree=Pos _ _ _ _ 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 repeat repeat VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 quasispecies quasispecy NOUN NNS Number=Plur _ _ _ _ 10 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 basal basal ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3394 # text = The generation of genomic diversity during the course of infection has the potential to affect all aspects of HIV-1 replication, including expression of the proviral genome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 5 diversity diversity NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 course course NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 potential potential NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 affect affect VERB VB VerbForm=Inf _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 aspects aspect NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 29 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3395 # text = To gain a better understanding of the impact of long terminal repeat (LTR) sequence diversity on LTR-directed gene expression in cells of the central nervous system (CNS) and immune system, we amplified and cloned LTRs from proviral DNA in HIV-1-infected peripheral blood. 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 better better ADJ JJR Degree=Cmp _ _ _ _ 5 understanding understanding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 impact impact NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 diversity diversity NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 LTR- LTR- X AFX _ _ _ _ SpaceAfter=No 20 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 central central ADJ JJ Degree=Pos _ _ _ _ 28 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CNS Cn NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 immune immune ADJ JJ Degree=Pos _ _ _ _ 35 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 amplified amplify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 52 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3396 # text = Sequence analysis of nineteen LTRs cloned from 2 adult and 3 pediatric patients revealed an average of 33 nucleotide changes (with respect to the sequence of the LAI LTR) within the 455-bp U3 region. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nineteen nineteen NUM CD NumType=Card _ _ _ _ 5 LTRs LTRs NOUN NNS Number=Plur _ _ _ _ 6 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ _ 12 pediatric pediatric ADJ JJ Degree=Pos _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 average average NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 33 33 NUM CD NumType=Card _ _ _ _ 19 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 20 changes change NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 with with ADP IN _ _ _ _ _ 23 respect respect NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 LAI LAI PROPN NNP Number=Sing _ _ _ _ 30 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 455 455 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 bp bp NOUN NN Number=Sing _ _ _ _ 37 U3 U3 NUM CD NumType=Card _ _ _ _ 38 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3397 # text = Transient expression analyses in cells of neuroglial and lymphocytic origin demonstrated that some of these LTRs had activities which varied significantly from the LAI LTR in U-373 MG cells (an astrocytoma cell line) as well as in Jurkat cells (a CD4-positive lymphocyte cell line). 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 neuroglial neuroglial ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 10 origin origin NOUN NN Number=Sing _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 some some DET DT _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 17 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 varied vary VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 LAI LAI PROPN NNP Number=Sing _ _ _ _ 25 LTR LTR PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 373 373 NUM CD NumType=Card _ _ _ _ 30 MG Mg NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 astrocytoma astrocytoma NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 as as ADV RB _ _ _ _ _ 39 well well ADV RB Degree=Pos _ _ _ _ 40 as as ADP IN _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 positive positive ADJ JJ Degree=Pos _ _ _ _ 49 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3398 # text = While LTRs which demonstrated the highest activities in U-373 MG cells also yielded high activities in Jurkat cells, the LTRs were generally more active in Jurkat cells when compared to the LAI LTR. 1 While while SCONJ IN _ _ _ _ _ 2 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 highest highest ADJ JJS Degree=Sup _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 373 373 NUM CD NumType=Card _ _ _ _ 12 MG Mg NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTRs LTRs PROPN NNPS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 generally generally ADV RB _ _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 active active ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 when when ADV WRB PronType=Int _ _ _ _ 32 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 LAI LAI PROPN NNP Number=Sing _ _ _ _ 36 LTR. LTR. PROPN NNP Number=Sing _ _ _ _ # sent_id = 3399 # text = Differences in LTR sequence also resulted in differences in transcription factor recruitment to cis-acting sites within the U3 region of the LTR, as demonstrated by electrophoretic mobility shift assays. 1 Differences difference NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 LTR LTR PROPN NNP Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 -acting -act ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 U3 U3 NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 29 mobility mobility NOUN NN Number=Sing _ _ _ _ 30 shift shift NOUN NN Number=Sing _ _ _ _ 31 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3400 # text = In particular, naturally occurring sequence variation impacted transcription factor binding to an activating transcription factor/cAMP response element binding (ATF/CREB) binding site (located between the LEF-1 and distal NF-kappaB transcription factor binding sites) that we identified in previous studies of the HIV-1 LTR. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 naturally naturally ADV RB _ _ _ _ _ 5 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 variation variation NOUN NN Number=Sing _ _ _ _ 8 impacted impact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 activating activating VERB VBG VerbForm=Ger _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 distal distal ADJ JJ Degree=Pos _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 that that PRON WDT PronType=Rel _ _ _ _ 47 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 48 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 previous previous ADJ JJ Degree=Pos _ _ _ _ 51 studies study NOUN NNS Number=Plur _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 1 1 NUM CD NumType=Card _ _ _ _ 57 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3401 # text = These findings suggest that LTR sequence changes can significantly affect basal LTR function and transcription factor recruitment, which may, in turn, alter the course of viral replication in cells of CNS and immune system origin. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 significantly significantly ADV RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 basal basal ADJ JJ Degree=Pos _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 alter alter VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 course course NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 CNS Cn NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 immune immune ADJ JJ Degree=Pos _ _ _ _ 37 system system NOUN NN Number=Sing _ _ _ _ 38 origin origin NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3402 # text = Document 003001227 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001227 003001227 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3403 # text = Inhibition of NF-kappa B by sodium salicylate and aspirin [see comments] 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 sodium sodium NOUN NN Number=Sing _ _ _ _ 9 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 3404 # text = The transcription factor nuclear factor-kappa B (NF-kappa B) is critical for the inducible expression of multiple cellular and viral genes involved in inflammation and infection including interleukin-1 (IL-1), IL-6, and adhesion molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 critical critical ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 23 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 viral viral ADJ JJ Degree=Pos _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 infection infection NOUN NN Number=Sing _ _ _ _ 32 including include VERB VBG VerbForm=Ger _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - SYM SYM _ _ _ _ SpaceAfter=No 44 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 48 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3405 # text = The anti-inflammatory drugs sodium salicylate and aspirin inhibited the activation of NF-kappa B, which further explains the mechanism of action of these drugs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 further further ADV RB _ _ _ _ _ 19 explains explain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 action action NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3406 # text = This inhibition prevented the degradation of the NF-kappa B inhibitor, I kappa B, and therefore NF-kappa B was retained in the cytosol. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 therefore therefore ADV RB _ _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3407 # text = Sodium salicylate and aspirin also inhibited NF-kappa B-dependent transcription from the Ig kappa enhancer and the human immunodeficiency virus (HIV) long terminal repeat (LTR) in transfected T cells. 1 Sodium sodium PROPN NNP Number=Sing _ _ _ _ 2 salicylate salicylate VERB VB VerbForm=Inf _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 aspirin aspirin VERB VB VerbForm=Inf _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Ig ig PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 transfected transfect ADJ JJ Degree=Pos _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3408 # text = Document 003001228 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001228 003001228 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3409 # text = Costimulation of peripheral blood T cell activation by human endothelial cells. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 T t NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3410 # text = Enhanced IL-2 transcription correlates with increased c-fos synthesis and increased Fos content of AP-1. 1 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 Fos Fos NOUN NNS Number=Plur _ _ _ _ 16 content content NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3411 # text = Endothelial cells (EC) act as APC for resting PBL in vitro, and may have important roles in vivo in the pathogenesis of allograft rejection and delayed hypersensitivity. 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 act act NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 APC APC PROPN NNP Number=Sing _ _ _ _ 9 for for SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 PBL PBL PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 have have VERB VB VerbForm=Inf _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 roles role NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vivo vivo NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 allograft allograft NOUN NN Number=Sing _ _ _ _ 27 rejection rejection NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 30 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3412 # text = We previously reported that human umbilical vein EC provide costimulatory signals to PHA-stimulated PBL via CD2:lymphocyte function-associated Ag-3 and an unidentified ligand pair, resulting in a three- to eight-fold enhancement of IL-2 production. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 7 vein vein NOUN NN Number=Sing _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ _ 9 provide provide VERB VB VerbForm=Inf _ _ _ _ 10 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 PBL pBl NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 CD2 CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ SpaceAfter=No 20 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ag ag NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 30 ligand ligand NOUN NN Number=Sing _ _ _ _ 31 pair pair NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 resulting result VERB VBG VerbForm=Ger _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 eight eight NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 fold fold NOUN NN Number=Sing _ _ _ _ 42 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3413 # text = The physiologic relevance of this increase was demonstrated by the proliferative advantage provided by EC to PBL suboptimally stimulated with mAb OKT3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 3 relevance relevance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 advantage advantage NOUN NN Number=Sing _ _ _ _ 13 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 PBL PBL PROPN NNP Number=Sing _ _ _ _ 18 suboptimally suboptimally ADV RB _ _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 mAb mAb PROPN NNP Number=Sing _ _ _ _ 22 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3414 # text = We now report that EC costimulation causes increased levels of IL-2 mRNA as a result of increased IL-2 transcription in PBL. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 7 causes cause NOUN NNS Number=Plur _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 result result NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3415 # text = We therefore examined the effects of EC on T cell nuclear factors known to regulate IL-2 transcription, including c-jun and c-fos-two components of the transcription factor AP-1, NFAT, and others. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 EC EC PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell VERB VB VerbForm=Inf _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 jun jun NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 two two NUM CD NumType=Card _ _ _ _ 29 components component NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3416 # text = PBL constitutively express c-jun transcripts, and the level of c-jun mRNA is not altered by PHA activation in the absence or presence of EC. 1 PBL pBl AUX MD VerbForm=Fin _ _ _ _ 2 constitutively constitutively ADV RB _ _ _ _ _ 3 express express VERB VB VerbForm=Inf _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 presence presence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3417 # text = In contrast, c-fos mRNA is absent from resting T cells and is induced on PHA activation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3418 # text = EC alone do not induce c-fos mRNA but augment the level of c-fos mRNA in PHA-activated 1 EC EC PROPN NNP Number=Sing _ _ _ _ 2 alone alone ADV RB _ _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 augment augment VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fos fo NOUN NNS Number=Plur _ _ _ _ 17 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 3419 # text = T cells by 3- to 10-fold. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3420 # text = This effect is largely independent of the CD2:lymphocyte function-associated Ag-3 pathway. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 largely largely ADV RB _ _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ SpaceAfter=No 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Ag ag NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3421 # text = Gel-shift analysis reveals the constitutive presence of nuclear factors in resting PBL that bind to the proximal AP-1 site of the IL-2 promoter and that contain immunoreactive c-Jun but not c-Fos protein. 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 resting rest VERB VBG VerbForm=Ger _ _ _ _ 14 PBL PBL PROPN NNP Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 34 c- c- SYM NFP _ _ _ _ SpaceAfter=No 35 Jun Jun PROPN NNP Number=Sing _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 c class ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 Fos Fos ADJ JJ Degree=Pos _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3422 # text = In contrast, AP-1 from PHA-activated cells contains c-Jun and low levels of c-Fos. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 Jun Jun PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3423 # text = Strikingly, costimulation with EC results in a dramatic increase (up to 15-fold) in the c-Fos content of AP-1. 1 Strikingly strikingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 up up ADP IN _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 Fos Fos PROPN NNP Number=Sing _ _ _ _ 23 content content NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3424 # text = Levels of other nuclear factors involved in IL-2 regulation were not altered by EC, although NFAT-DNA complexes migrated at a slightly different mobility. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 involved involve ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 NFAT Nfat ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 complexes complex NOUN NNS Number=Plur _ _ _ _ 23 migrated migrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 slightly slightly ADV RB _ _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3425 # text = In summary, our data suggest that changes in the composition of transcription factor AP-1 is a key molecular mechanism for increasing IL-2 transcription and may underlie the phenomenon of costimulation by EC. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 composition composition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 key key ADJ JJ Degree=Pos _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 for for SCONJ IN _ _ _ _ _ 24 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3426 # text = Document 003001229 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001229 003001229 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3427 # text = Inhibition of human immunodeficiency virus type 1 replication by a Tat-activated, transduced interferon gene: targeted expression to human immunodeficiency virus type 1-infected cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interferon interferon ADP IN _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3428 # text = We have examined the feasibility of using interferon (IFN) gene transfer as a novel approach to anti-human immunodeficiency virus type 1 (HIV-1) therapy in this study. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 feasibility feasibility NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 interferon interferon NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 transfer transfer NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ _ 17 approach approach NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 therapy therapy NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3429 # text = To limit expression of a transduced HIV-1 long terminal repeat (LTR)-IFNA2 (the new approved nomenclature for IFN genes is used throughout this article) hybrid gene to the HIV-1-infected cells, HIV-1 LTR was modified. 1 To to PART TO _ _ _ _ _ 2 limit limit VERB VB VerbForm=Inf _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 IFNA2 Ifna2 NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 new new ADJ JJ Degree=Pos _ _ _ _ 21 approved approve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 nomenclature nomenclature NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 throughout throughout ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 article article NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 LTR Ltr NOUN NN Number=Sing _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3430 # text = Deletion of the NF-kappa B elements of the HIV-1 LTR significantly inhibited Tat-mediated transactivation in T-cell lines, as well as in a monocyte line, U937. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as ADV RB _ _ _ _ _ 27 well well ADV RB Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 32 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3431 # text = Replacement of the NF-kappa B elements in the HIV-1 LTR by a DNA fragment derived from the 5'-flanking region of IFN-stimulated gene 15 (ISG15), containing the IFN-stimulated response element, partially restored Tat-mediated activation of LTR in T cells as well as in monocytes. 1 Replacement replacement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ _ 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 15 15 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ISG15 ISG15 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 containing contain VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 partially partially ADV RB _ _ _ _ _ 46 restored restore VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 LTR LTR PROPN NNP Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 as as ADV RB _ _ _ _ _ 57 well well ADV RB Degree=Pos _ _ _ _ 58 as as ADP IN _ _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3432 # text = Insertion of this chimeric promoter (ISG15 LTR) upstream of the human IFNA2 gene directed high levels of IFN synthesis in Tat-expressing cells, while this promoter was not responsive to tumor necrosis factor alpha-mediated activation. 1 Insertion Insertion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 chimeric chimeric NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ISG15 ISG15 NUM CD NumType=Card _ _ _ _ 8 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 upstream upstream NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 IFNA2 Ifna2 NOUN NN Number=Sing _ _ _ _ 15 gene gene PRON NN Number=Sing _ _ _ _ 16 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 while while SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3433 # text = ISG15-LTR-IFN hybrid gene inserted into the retrovirus vector was transduced into Jurkat and U937 cells. 1 ISG15 ISG15 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 IFN IFN PROPN NNP Number=Sing _ _ _ _ 6 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 inserted insert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 retrovirus retrovirus NOUN NN Number=Sing _ _ _ _ 12 vector vector NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3434 # text = Selected transfected clones produced low levels of IFN A (IFNA) constitutively, and their abilities to express interleukin-2 and interleukin-2 receptor upon stimulation with phytohemagglutinin and phorbol myristate acetate were retained. 1 Selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ _ 9 A a PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IFNA IFNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 constitutively constitutively ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 abilities ability NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 express express VERB VB VerbForm=Inf _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 upon upon ADP IN _ _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 34 myristate myristate NOUN NN Number=Sing _ _ _ _ 35 acetate acetate NOUN NN Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3435 # text = Enhancement of IFNA synthesis observed upon HIV-1 infection resulted in significant inhibition of HIV-1 replication for a period of at least 30 days. 1 Enhancement Enhancement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IFNA IFNA PROPN NNP Number=Sing _ _ _ _ 4 synthesis synthesis PROPN NNP Number=Sing _ _ _ _ 5 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 upon upon ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ _ 11 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 period period NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 at at ADV RB _ _ _ _ _ 25 least least ADV RBS Degree=Sup _ _ _ _ 26 30 30 NUM CD NumType=Card _ _ _ _ 27 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3436 # text = Virus isolated from IFNA-producing cells was able to replicate in the U937 cells but did not replicate efficiently in U937 cells transduced with the IFNA gene. 1 Virus virus PROPN NNP Number=Sing _ _ _ _ 2 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 IFNA IFNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 producing produce VERB VBG VerbForm=Ger _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 U937 U937 NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 20 efficiently efficiently ADV RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IFNA IFNA PROPN NNP Number=Sing _ _ _ _ 28 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3437 # text = These results suggest that targeting IFN synthesis to HIV-1-infected cells is an attainable goal and that autocrine IFN synthesis results in a long-lasting and permanent suppression of HIV-1 replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 targeting targete VERB VBG VerbForm=Ger _ _ _ _ 6 IFN Ifn ADP RP _ _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -infected -infect ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 attainable attainable ADJ JJ Degree=Pos _ _ _ _ 17 goal goal NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 21 IFN Ifn ADP IN _ _ _ _ _ 22 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 23 results result NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 lasting lasting ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 31 suppression suppression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3438 # text = Document 003001230 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001230 003001230 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3439 # text = Protein kinase C-zeta mediates NF-kappa B activation in human immunodeficiency virus-infected monocytes. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -zeta -zeta PROPN NNP Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3440 # text = The molecular mechanisms regulating human immunodeficiency virus (HIV) persistence in a major cell reservoir such as the macrophage remain unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 persistence persistence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3441 # text = NF-kappa B is a transcription factor involved in the regulation of the HIV long terminal repeat and is selectively activated following HIV infection of human macrophages. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 repeat repeat NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 selectively selectively ADV RB _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 following follow VERB VBG VerbForm=Ger _ _ _ _ 24 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3442 # text = Although little information as to what signal transduction pathways mediate NF-kappa B activation in monocytes-macrophages is available, our previous work indicated that classical protein kinase C (PKC) isoenzymes were not involved in the HIV-mediated NF-kappa B activation. 1 Although although SCONJ IN _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 information information NOUN NN Number=Sing _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 to to SCONJ IN _ _ _ _ _ 6 what what PRON WP PronType=Int _ _ _ _ 7 signal signal VERB VB VerbForm=Inf _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 available available ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 24 previous previous ADJ JJ Degree=Pos _ _ _ _ 25 work work NOUN NN Number=Sing _ _ _ _ 26 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 classical classical ADJ JJ Degree=Pos _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 C C PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3443 # text = In this study, we have focused on atypical PKC isoenzymes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 atypical atypical ADJ JJ Degree=Pos _ _ _ _ 10 PKC Pkc NOUN NN Number=Sing _ _ _ _ 11 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3444 # text = PKC-zeta belongs to this family and is known to be an important step in NF-kappa B activation in other cell systems. 1 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 zeta zeta NOUN NN Number=Sing _ _ _ _ 4 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 step step NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3445 # text = Immunoblotting experiments with U937 cells demonstrate that PKC-zeta is present in these cells, and its expression can be downmodulated by antisense oligonucleotides (AO). 1 Immunoblotting Immunoblott VERB VBG VerbForm=Ger _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 zeta zeta NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 present present ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 downmodulated downmodulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 25 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 AO AO INTJ UH _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3446 # text = The HIV-mediated NF-kappa B activation is selectively reduced by AO to PKC-zeta. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 AO AO PROPN NNP Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 zeta zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3447 # text = In addition, cotransfection of a negative dominant molecule of PKC-zeta (PKC-zeta mut) with NF-kappa B-dependent reporter genes selectively inhibits the HIV- but not phorbol myristate acetate- or lipopolysaccharide-mediated activation of NF-kappa B. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 zeta zeta NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 zeta zeta NOUN NN Number=Sing _ _ _ _ 18 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 selectively selectively ADV RB _ _ _ _ _ 30 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not ADV RB _ _ _ _ _ 36 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 37 myristate myristate NOUN NN Number=Sing _ _ _ _ 38 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappa kappa PROPN NNP Number=Sing _ _ _ _ 49 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3448 # text = That PKC-zeta is specific in regulating NF-kappa B is concluded from the inability of PKC-zeta(mut) to interfere with the basal or phorbol myristate acetate-inducible CREB- or AP1-dependent transcriptional activity. 1 That that DET DT Number=Sing|PronType=Dem _ _ _ _ 2 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 zeta zeta NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inability inability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 PKC-zeta PKC-zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 basal basal NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 myristate myristate NOUN NN Number=Sing _ _ _ _ 31 acetate acetate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 32 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 33 CREB Creb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3449 # text = Lastly, we demonstrate a selective inhibition of p24 production by HIV-infected human macrophages when treated with AO to PKC-zeta. 1 Lastly Lastly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 selective selective ADJ JJ Degree=Pos _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p24 p24 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 HIV- HIV- X GW _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 AO AO PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 zeta zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3450 # text = Altogether, these results suggest that atypical PKC isoenzymes, including PKC-zeta, participate in the signal transduction pathways by which HIV infection results in the activation of NF-kappa B in human monocytic cells and macrophages. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 atypical atypical ADJ JJ Degree=Pos _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ _ 9 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 participate participate VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ _ 20 transduction transduction NOUN NN Number=Sing _ _ _ _ 21 pathways pathways NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 HIV Hiv AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 results result NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3451 # text = Document 003001231 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001231 003001231 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3452 # text = Regulation of I kappa B alpha and p105 in monocytes and macrophages persistently infected with human immunodeficiency virus. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B B ADJ JJ Degree=Pos _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 p105 p105 NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 persistently persistently ADV RB _ _ _ _ _ 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3453 # text = The mechanisms regulating human immunodeficiency virus (HIV) persistence in human monocytes/macrophages are partially understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 persistence persistence NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3454 # text = Persistent HIV infection of U937 monocytic cells results in NF-kappa B activation. 1 Persistent persistent ADJ JJ Degree=Pos _ _ _ _ 2 HIV HIV NOUN NN Number=Sing _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3455 # text = Whether virus-induced NF-kappa B activation is a mechanism that favors continuous viral replication in macrophages remains unknown. 1 Whether whether SCONJ IN _ _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 favors favor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3456 # text = To further delineate the molecular mechanisms involved in the activation of NF-kappa B in HIV-infected monocytes and macrophages, we have focused on the regulation of the I kappa B molecules. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa X FW Foreign=Yes _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3457 # text = First, we show that persistent HIV infection results in the activation of NF-kappa 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 3458 # text = B not only in monocytic cells but also in macrophages. 1 B b VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 not not ADV RB _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3459 # text = In HIV-infected cells, I kappa B alpha protein levels are decreased secondary to enhanced protein degradation. 1 In in ADP IN _ _ _ _ _ 2 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3460 # text = This parallels the increased I kappa B alpha synthesis secondary to increased I kappa B alpha gene transcription, i.e., increased RNA and transcriptional activity of its promoter-enhancer. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 parallels parallel VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha ADV RB _ _ _ _ _ 9 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 RNA RNA PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3461 # text = Another protein with I kappa B function, p105, is also modified in HIV-infected cells: p105 and p50 steady-state protein levels are increased as a result of increased synthesis and proteolytic processing of p105. 1 Another another DET DT _ _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 p105 p105 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 p50 p50 NUM CD NumType=Card _ _ _ _ 22 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 state state NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 result result NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 37 processing processing NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3462 # text = Transcriptional activity of p105 is also increased in infected cells and is also mediated by NF-kappa B through a specific kappa B motif. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p105 p105 NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3463 # text = These results demonstrate the existence of a triple autoregulatory loop in monocytes and macrophages involving HIV, p105 and p50, and MAD3, with the end result of persistent NF-kappa B activation and viral persistence. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 existence existence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 triple triple ADJ JJ Degree=Pos _ _ _ _ 9 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 10 loop loop NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 15 involving involve VERB VBG VerbForm=Ger _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p105 p105 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 MAD3 MAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 end end NOUN NN Number=Sing _ _ _ _ 28 result result NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 viral viral ADJ JJ Degree=Pos _ _ _ _ 38 persistence persistence NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3464 # text = Furthermore, persistent HIV infection of monocytes and macrophages provides a useful model with which to study concomitant modifications of different I kappa B molecules. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 4 HIV Hiv NOUN NN Number=Sing _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 useful useful ADJ JJ Degree=Pos _ _ _ _ 13 model model NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 study study VERB VB VerbForm=Inf _ _ _ _ 18 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 19 modifications modification NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 kappa kappa X FW Foreign=Yes _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3465 # text = Document 003001232 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001232 003001232 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3466 # text = Characterization of 5' end of human thromboxane receptor gene. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT `` _ _ _ _ _ 5 end end NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3467 # text = Organizational analysis and mapping of protein kinase C--responsive elements regulating expression in platelets. 1 Organizational organizational ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 mapping mapping NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -- -- PUNCT , _ _ _ _ SpaceAfter=No 10 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3468 # text = Platelet thromboxane receptors are acutely and reversibly upregulated after acute myocardial infarction. 1 Platelet Platelet VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 thromboxane thromboxane PRON PRP _ _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 acutely acutely ADV RB _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 reversibly reversibly ADV RB _ _ _ _ _ 8 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 12 infarction infarction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3469 # text = To determine if platelet thromboxane receptors are under transcriptional control, we isolated and characterized human genomic DNA clones containing the 5' flanking region of the thromboxane receptor gene. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 if if SCONJ IN _ _ _ _ _ 4 platelet platelet NOUN NN Number=Sing _ _ _ _ 5 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 under under ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 clones clone NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ _ 24 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3470 # text = The exon-intron structure of the 5' portion of the thromboxane receptor gene was determined initially by comparing the nucleotide sequence of the 5' flanking genomic clone with that of a novel human uterine thromboxane receptor cDNA that extended the mRNA 141 bp further upstream than the previously identified human placental cDNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 exon exon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 intron intron NOUN NN Number=Sing _ _ _ _ 5 structure structure NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' 's PUNCT `` _ _ _ _ _ 10 portion portion NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 thromboxane thromboxane ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 initially initially ADV RB _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' PUNCT `` _ _ _ _ _ 28 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 29 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 30 clone clone NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 novel novel NOUN NN Number=Sing _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 uterine uterine NOUN NN Number=Sing _ _ _ _ 38 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 39 receptor receptor NOUN NN Number=Sing _ _ _ _ 40 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 41 that that PRON WDT PronType=Rel _ _ _ _ 42 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 45 141 141 NUM CD NumType=Card _ _ _ _ 46 bp bp NOUN NN Number=Sing _ _ _ _ 47 further further ADV RBR Degree=Cmp _ _ _ _ 48 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 49 than than ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 previously previously ADV RB _ _ _ _ _ 52 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 human human ADJ JJ Degree=Pos _ _ _ _ 54 placental placental NOUN NN Number=Sing _ _ _ _ 55 cDNA cDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3471 # text = A major transcription initiation site was located in three human tissues approximately 560 bp upstream from the translation initiation codon and 380 bp upstream from any previously identified transcription initiation site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 initiation initiation NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 560 560 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 translation translation NOUN NN Number=Sing _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 codon codon NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 380 380 NUM CD NumType=Card _ _ _ _ 23 bp bp NOUN NN Number=Sing _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 any any DET DT _ _ _ _ _ 27 previously previously ADV RB _ _ _ _ _ 28 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3472 # text = The thromboxane receptor gene has neither a TATA nor a CAAT consensus site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 neither neither CCONJ CC _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 TATA TATa NOUN NN Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 CAAT Caat NOUN NN Number=Sing _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3473 # text = Promoter function of the 5' flanking region of the thromboxane receptor gene was evaluated by transfection of thromboxane receptor gene promoter/chloramphenicol acetyltransferase (CAT) chimera plasmids into platelet-like K562 cells. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ _ 7 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thromboxane thromboxane PRON PRP _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 25 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 chimera chimera NOUN NN Number=Sing _ _ _ _ 30 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 31 into into ADP IN _ _ _ _ _ 32 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 like like INTJ UH _ _ _ _ _ 35 K562 K562 NUM CD NumType=Card _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3474 # text = Thromboxane receptor promoter activity, as assessed by CAT expression, was relatively weak but was significantly enhanced by phorbol ester treatment. 1 Thromboxane Thromboxane ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 as as SCONJ IN _ _ _ _ _ 7 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 CAT cat NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 relatively relatively ADV RB _ _ _ _ _ 14 weak weak ADJ JJ Degree=Pos _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3475 # text = Functional analysis of 5' deletion constructs in transfected K562 cells and gel mobility shift localized the major phorbol ester-responsive motifs in the thromboxane receptor gene promoter to a cluster of activator protein-2 (AP-2) binding consensus sites located approximately 1.8 kb 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' PUNCT `` _ _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 constructs construct NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 K562 K562 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 gel gel NOUN NN Number=Sing _ _ _ _ 14 mobility mobility NOUN NN Number=Sing _ _ _ _ 15 shift shift NOUN NN Number=Sing _ _ _ _ 16 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 motifs motif NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 cluster cluster NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 activator activator NOUN NN Number=Sing _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 consensus consensus NOUN NN Number=Sing _ _ _ _ 45 sites site NOUN NNS Number=Plur _ _ _ _ 46 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 approximately approximately ADV RB _ _ _ _ _ 48 1.8 1.8 NUM CD NumType=Card _ _ _ _ 49 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 3476 # text = 5' from the transcription initiation site. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 initiation initiation NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3477 # text = These studies are the first to determine the structure and organization of the 5' end of the thromboxane receptor gene and demonstrate that thromboxane receptor gene expression can be regulated by activation of protein kinase C via induction of an AP-2-like nuclear factor binding to upstream promoter elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 structure structure NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 organization organization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ _ 16 end end NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 thromboxane thromboxane PRON PRP _ _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C c NOUN NN Number=Sing _ _ _ _ 38 via via ADP IN _ _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 like like ADP IN _ _ _ _ _ 47 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ _ 49 binding bind VERB VBG VerbForm=Ger _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ _ 53 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3478 # text = These findings strongly suggest that the mechanism for previously described upregulation of platelet thromboxane receptors after acute myocardial infarction is increased thromboxane receptor gene transcription in platelet-progenitor cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 platelet platelet NOUN NN Number=Sing _ _ _ _ 14 thromboxane thromboxane PRON PRP _ _ _ _ _ 15 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 19 infarction infarction NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 thromboxane thromboxane ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3479 # text = Document 003001233 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001233 003001233 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3480 # text = The effect of Toremifene on the expression of some genes in human mononuclear cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Toremifene Toremifene PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3481 # text = Toremifene exerts multiple and varied effects on the gene expression of human peripheral mononuclear cells. 1 Toremifene Toremifene PRON PRP _ _ _ _ _ 2 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 varied varied ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3482 # text = After short-term, in vitro exposure to therapeutical levels, distinct changes in P-glycoprotein, steroid receptors, p53 and Bcl-2 expression take place. 1 After after ADP IN _ _ _ _ _ 2 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 term term NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 therapeutical therapeutical ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 changes change NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 steroid steroid NOUN NN Number=Sing _ _ _ _ 20 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p53 p53 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 take take NOUN NN Number=Sing _ _ _ _ 29 place place NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3483 # text = In view of the increasing use of antiestrogens in cancer therapy and prevention, there is obvious merit in long-term in vivo studies to be conducted. 1 In in ADP IN _ _ _ _ _ 2 view view NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 antiestrogens antiestrogen NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cancer cancer NOUN NN Number=Sing _ _ _ _ 11 therapy therapy NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 prevention prevention NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 there there PRON EX _ _ _ _ _ 16 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 18 merit merit NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 term term NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3484 # text = Document 003001234 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001234 003001234 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3485 # text = Role of HIV-1 Nef expression in activation pathways in CD4+ T cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 Nef Nef NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3486 # text = The role of the human immunodeficiency virus (HIV-1) Nef protein in T cell activation pathways was investigated using a Jurkat CD4+ cell line stably transfected with a Nef expression vector. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 pathways pathway NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 stably stably ADV RB _ _ _ _ _ 30 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 Nef Nef PROPN NNP Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3487 # text = Secretion of IL-2 and TNF-alpha, surface expression of IL-2R, and DNA-binding activity of NF-kappa B and AP-1 (Fos/Jun) complex in response to phorbol myristate acetate, TNF-alpha, or immobilized antibodies to CD3 were monitored. 1 Secretion Secretion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2R 2R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 complex complex NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 42 myristate myristate NOUN NN Number=Sing _ _ _ _ 43 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 or or CCONJ CC _ _ _ _ _ 50 immobilized immobilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3488 # text = These parameters were not modified by Nef expression in Jurkat cells, whereas stimulation with the same stimuli resulted in partial inhibition of LTR activation in Nef+ Jurkat cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 parameters parameter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Nef Nef PROPN NNP Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 same same ADJ JJ Degree=Pos _ _ _ _ 18 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 + + SYM SYM _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3489 # text = This inhibition was not mediated through Nef phosphorylation on Thr-15 or GTP-binding activity because mutations in critical sites did not alter this inhibition. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 Nef Nef PROPN NNP Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 Thr Thr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -15 -15 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 GTP Gtp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 because because SCONJ IN _ _ _ _ _ 18 mutations mutation NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 critical critical ADJ JJ Degree=Pos _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 alter alter ADV RB _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3490 # text = Analysis of truncated LTRs confirmed that inhibition of LTR activation was not mediated through NF-kappa B-binding activity but through the region containing the negative responding elements (NREs). 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 LTRs LTRs NOUN NNS Number=Plur _ _ _ _ 5 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 LTR LTR PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 responding responding NOUN NN Number=Sing _ _ _ _ 30 elements element NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NREs NREs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3491 # text = These results suggest that Nef downmodulates LTR activation without significantly inhibiting the capacity of T cells to respond to immunological activations. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Nef Nef PROPN NNP Number=Sing _ _ _ _ 6 downmodulates downmodulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LTR LTR ADJ JJR Degree=Cmp _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 without without SCONJ IN _ _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 respond respond VERB VB VerbForm=Inf _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 21 activations activation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3492 # text = Document 003001235 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001235 003001235 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3493 # text = Transcriptional activation of the vascular cell adhesion molecule-1 gene in T lymphocytes expressing human T-cell leukemia virus type 1 Tax protein. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 expressing express VERB VBG VerbForm=Ger _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 Tax tax NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3494 # text = Recruitment and extravasation of T cells through the blood-brain barrier are favored by adhesion molecule-mediated interactions of circulating T cells with endothelial cells. 1 Recruitment recruitment NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 extravasation extravasation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 brain brain NOUN NN Number=Sing _ _ _ _ 12 barrier barrier NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 favored favore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 interactions interaction NOUN NNS Number=Plur _ _ _ _ 21 of of SCONJ IN _ _ _ _ _ 22 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3495 # text = Since a common pathological finding in human T-cell leukemia virus type 1 (HTLV-1)-associated diseases is the infiltration of HTLV-1-infected T lymphocytes into various organs, we have looked for the profile of adhesion molecules expressed by HTLV-1-transformed T cells. 1 Since since ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 common common ADJ JJ Degree=Pos _ _ _ _ 4 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 5 finding finding NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 X LS _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 into into ADP IN _ _ _ _ _ 33 various various ADJ JJ Degree=Pos _ _ _ _ 34 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 37 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 looked look VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 profile profile NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 molecules molecule NOUN NNS Number=Plur _ _ _ _ 45 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 T t PROPN NNP Number=Sing _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3496 # text = Flow cytometry analysis indicated that these cells were expressing high levels of vascular cell adhesion molecule 1 (VCAM-1 [CD106]), a 110-kDa member of the immunoglobulin gene superfamily, first identified on endothelial cells stimulated with inflammatory cytokines. 1 Flow flow ADJ JJ Degree=Pos _ _ _ _ 2 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 expressing expresse VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 16 molecule molecule NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CD106 CD106 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 110 110 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 -kDa -kDa NOUN NN Number=Sing _ _ _ _ 30 member member NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 first first ADV RB _ _ _ _ _ 38 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 45 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3497 # text = This adhesion molecule was also expressed by T cells obtained from one patient with HTLV-1-associated myelopathy/tropical spastic paraparesis but not by activated T cells isolated from one normal blood donor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 patient patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 myelopathy myelopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 tropical tropical ADJ JJ Degree=Pos _ _ _ _ 23 spastic spastic ADJ JJ Degree=Pos _ _ _ _ 24 paraparesis paraparesis NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 normal normal ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3498 # text = The role of the viral trans-activator Tax protein in the induction of VCAM-1 was first indicated by the detection of this adhesion molecule on Jurkat T-cell clones stably expressing the tax gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 first first ADV RB _ _ _ _ _ 20 indicated indicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 detection detection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 T- T- PUNCT , _ _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 clones clone NOUN NNS Number=Plur _ _ _ _ 33 stably stably ADV RB _ _ _ _ _ 34 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 tax tax NOUN NN Number=Sing _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3499 # text = The effect of Tax on VCAM-1 gene transcription was next confirmed in JPX-9 cells, a subclone of Jurkat cells, carrying the tax sequences under the control of an inducible promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 next next ADV RB _ _ _ _ _ 13 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 JPX JPX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 9 9 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 subclone subclone NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tax tax NOUN NN Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ _ 30 under under ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3500 # text = Furthermore, deletion and mutation analyses of the VCAM-1 promoter performed with chloramphenicol acetyltransferase constructs revealed that Tax was trans activating the VCAM-1 promoter via two NF-kappaB sites present at bp -72 and -57 in the VCAM-1 gene promoter, with both of them being required for the Tax-induced expression of this adhesion molecule. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 16 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 17 constructs constructs NOUN NNS Number=Plur _ _ _ _ 18 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 Tax Tax PROPN NNP Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 trans tran NOUN NNS Number=Plur _ _ _ _ 23 activating activat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 via via ADP IN _ _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 present present VERB VB VerbForm=Inf _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 bp bp NOUN NN Number=Sing _ _ _ _ 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 72 72 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 57 57 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 both both DET DT _ _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 55 being be AUX VBG VerbForm=Ger _ _ _ _ 56 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 65 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 66 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 3501 # text = Finally, gel mobility shift assays demonstrated the nuclear translocation of proteins specifically bound to these two NF-kappaB motifs, confirming that VCAM-1 was induced on Tax-expressing cells in a kappaB-dependent manner. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 bound bound ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 expressing express VERB VBG VerbForm=Ger _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3502 # text = Collectively, these results therefore suggest that the exclusive Tax-induced expression of VCAM-1 on T cells may represent a pivotal event in the progression of HTLV-1-associated diseases. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ _ 6 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 10 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 represent represent VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 25 event event NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 progression progression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3503 # text = Document 003001236 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001236 003001236 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3504 # text = Rel/NF-kappa B transcription factors and the control of apoptosis. 1 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3505 # text = The process of apoptosis is used to eliminate unwanted cells from a wide variety of organisms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 eliminate eliminate VERB VB VerbForm=Inf _ _ _ _ 9 unwanted unwanted ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 wide wide ADJ JJ Degree=Pos _ _ _ _ 14 variety variety NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 organisms organism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3506 # text = Various extracellular signals, often converging in common intracellular pathways, can induce apoptosis in a cell-type-specific fashion. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 often often ADV RB _ _ _ _ _ 6 converging converge VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 type- type- SYM NFP _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3507 # text = Recent work from several laboratories has demonstrated that Rel/NF-kappa B transcription factors regulate apoptosis in many cell types. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 laboratories laboratory NOUN NNS Number=Plur _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 many many ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3508 # text = In most cells, Rel/NF-kappa B transcription factors appear to mediate survival signals that protect cells from apoptosis; however, under some circumstances, activation of these factors may also promote apoptosis. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 protect protect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 however however ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 some some DET DT _ _ _ _ _ 28 circumstances circumstance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 promote promote VERB VB VerbForm=Inf _ _ _ _ 37 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3509 # text = Document 003001237 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001237 003001237 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3510 # text = Reactive oxygen species and antioxidants in inflammatory diseases. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 species species NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3511 # text = This paper aims to review the role of free radical-induced tissue damage and antioxidant defence mechanisms in inflammatory diseases that involve pathogenic processes similar to the periodontal diseases. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 aims aim VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 review review VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 free free ADJ JJ Degree=Pos _ _ _ _ 10 radical radical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tissue tissue NOUN NN Number=Sing _ _ _ _ 14 damage damage NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 17 defence defence NOUN NN Number=Sing _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 25 processes process NOUN NNS Number=Plur _ _ _ _ 26 similar similar ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 30 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3512 # text = There is a clearly defined and substantial role for free radicals or reactive oxygen species (ROS) in periodontitis, but little research has been performed in this area. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 clearly clearly ADV RB _ _ _ _ _ 5 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 free free ADJ JJ Degree=Pos _ _ _ _ 11 radicals radical NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 14 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 research research NOUN NN Number=Sing _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3513 # text = This paper reviews the considerable data available relating ROS activity and antioxidant defence to inflammatory diseases and attempts to draw parallels with periodontitis, in an effort to stimulate more periodontal research in this important area. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 reviews review VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 6 data data NOUN NN Number=Sing _ _ _ _ 7 available available ADJ JJ Degree=Pos _ _ _ _ 8 relating relat VERB VBG VerbForm=Ger _ _ _ _ 9 ROS Ros ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 13 defence defence NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 attempts attempt NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 draw draw VERB VB VerbForm=Inf _ _ _ _ 21 parallels parallel NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 effort effort NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 30 more more ADV RBR _ _ _ _ _ 31 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 32 research research NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 important important ADJ JJ Degree=Pos _ _ _ _ 36 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3514 # text = The recent discovery of the transcription factor nuclear factor kappa B (NF-kappa B) is reviewed and several potential pathways for cytokine-induced periodontal tissue damage, mediated by NF-kappa B1 are discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 discovery discovery NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 reviewed review VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 potential potential ADJ JJ Degree=Pos _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 29 tissue tissue NOUN NN Number=Sing _ _ _ _ 30 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B1 b1 PROPN NNP Number=Sing _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3515 # text = Emphasis is placed on cytokines that have been studied in periodontitis, principally TNF-alpha, IL-1, IL-6, IL-8 and beta-interferon. 1 Emphasis Emphasis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 placed place VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 principally principally ADV RB _ _ _ _ _ 14 TNF Tnf ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 IL il ADV RB _ _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3516 # text = The link between cellular production of such important mediators of inflammation and the antioxidant (AO) thiols, cysteine and reduced glutathione (GSH), is discussed and it is hypothesised that NF-kappa B antagonists may offer important therapeutic benefits. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 link link NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 mediators mediator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 AO AO INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 thiols thiol INTJ UH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 cysteine cysteine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 discussed discussed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 hypothesised hypothesise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 40 may may AUX MD VerbForm=Fin _ _ _ _ 41 offer offer VERB VB VerbForm=Inf _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 44 benefits benefit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3517 # text = Document 003001238 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001238 003001238 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3518 # text = A novel mitogen-inducible gene product related to p50/p105-NF-kappa B participates in transactivation through a kappa B site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 p50/p105 p50/p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 participates participate NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3519 # text = A Rel-related, mitogen-inducible, kappa B-binding protein has been cloned as an immediate-early activation gene of human peripheral blood T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Rel-related Rel-related ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mitogen mitogen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B- B- PUNCT : _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3520 # text = The cDNA has an open reading frame of 900 amino acids capable of encoding a 97-kDa protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 open open ADJ JJ Degree=Pos _ _ _ _ 6 reading reading NOUN NN Number=Sing _ _ _ _ 7 frame frame NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 900 900 NUM CD NumType=Card _ _ _ _ 10 amino amino NOUN NN Number=Sing _ _ _ _ 11 acids acid NOUN NNS Number=Plur _ _ _ _ 12 capable capable ADJ JJ Degree=Pos _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 97 97 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kDa kDa NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3521 # text = This protein is most similar to the 105-kDa precursor polypeptide of p50-NF-kappa B. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 precursor precursor NOUN NN Number=Sing _ _ _ _ 12 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3522 # text = Like the 105-kDa precursor, it contains an amino-terminal Rel-related domain of about 300 amino acids and a carboxy-terminal domain containing six full cell cycle or ankyrin repeats. 1 Like like ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kDa kDa NOUN NN Number=Sing _ _ _ _ 6 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 Rel- rel- PUNCT : _ _ _ _ SpaceAfter=No 15 related related ADJ JJ Degree=Pos _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 about about ADV RB _ _ _ _ _ 19 300 300 NUM CD NumType=Card _ _ _ _ 20 amino amino ADJ JJ Degree=Pos _ _ _ _ 21 acids acid NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 terminal terminal NOUN NN Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 containing contain VERB VBG VerbForm=Ger _ _ _ _ 29 six six NUM CD NumType=Card _ _ _ _ 30 full full ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 cycle cycle NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 35 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3523 # text = In vitro-translated proteins, truncated downstream of the Rel domain and excluding the repeats, bind kappa B sites. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 downstream downstream NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 excluding exclude VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3524 # text = We refer to the kappa B-binding, truncated protein as p50B by analogy with p50-NF-kappa B and to the full-length protein as p97. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 refer refer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 p50B p50b NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 analogy analogy NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 length length NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 p97. p97. NOUN NN Number=Sing _ _ _ _ # sent_id = 3525 # text = p50B is able to form heteromeric kappa B-binding complexes with RelB, as well as with p65 and p50, the two subunits of NF-kappa B. Transient-transfection experiments in embryonal carcinoma cells demonstrate a functional cooperation between p50B and RelB or p65 in transactivation of a reporter plasmid dependent on a kappa B site. 1 p50B p50b NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 able able ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 form form VERB VB VerbForm=Inf _ _ _ _ 6 heteromeric heteromeric ADJ JJ Degree=Pos _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 RelB Relb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 p65 p65 NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 subunits subunit NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B. B. PROPN NNP Number=Sing _ _ _ _ 31 Transient Transient PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 transfection transfection NOUN NN Number=Sing _ _ _ _ 34 experiments experiment NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 embryonal embryonal ADJ JJ Degree=Pos _ _ _ _ 37 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 functional functional ADJ JJ Degree=Pos _ _ _ _ 42 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 43 between between ADP IN _ _ _ _ _ 44 p50B p50b NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 RelB Relb NOUN NN Number=Sing _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 p65 p65 NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 reporter reporter NOUN NN Number=Sing _ _ _ _ 54 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 on on ADP IN _ _ _ _ _ 57 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3526 # text = The data imply the existence of a complex family of NF-kappa B-like transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 existence existence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 complex complex ADJ JJ Degree=Pos _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3527 # text = Document 003001239 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001239 003001239 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3528 # text = MEK1 and the extracellular signal-regulated kinases are required for the stimulation of IL-2 gene transcription in T cells. 1 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 kinases kinase NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3529 # text = TCR engagement stimulates the activation of the protein kinase Raf-1. 1 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 2 engagement engagement NOUN NN Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3530 # text = Active Raf-1 phosphorylates and activates the mitogen-activated protein (MAP) kinase/extracellular signal-regulated kinase kinase 1 (MEK1), which in turn phosphorylates and activates the MAP kinases/extracellular signal regulated kinases, ERK1 and ERK2. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 phosphorylates phosphorylate NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 turn turn NOUN NN Number=Sing _ _ _ _ 32 phosphorylates phosphorylate NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 MAP map NOUN NN Number=Sing _ _ _ _ 37 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 40 signal signal NOUN NN Number=Sing _ _ _ _ 41 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 ERK1 Erk1 PROPN NNP Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 ERK2 Erk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3531 # text = Raf-1 activity promotes IL-2 production in activated T lymphocytes. 1 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3532 # text = Therefore, we sought to determine whether MEK1 and ERK activities also stimulate IL-2 gene transcription. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 ERK Erk PROPN NNP Number=Sing _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3533 # text = Expression of constitutively active Raf-1 or MEK1 in Jurkat T cells enhanced the stimulation of IL-2 promoter-driven transcription stimulated by a calcium ionophore and PMA, and together with a calcium ionophore the expression of each protein was sufficient to stimulate NF-AT activity. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 MEK1 MEK1 PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 calcium calcium NOUN NN Number=Sing _ _ _ _ 29 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 together together ADV RB _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 calcium calcium NOUN NN Number=Sing _ _ _ _ 38 ionophore ionophore SCONJ IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 each each DET DT _ _ _ _ _ 43 protein protein NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 48 NF Nf ADV RB _ _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 AT at ADJ JJ Degree=Pos _ _ _ _ 51 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3534 # text = Expression of MEK1-interfering mutants inhibited the stimulation of IL-2 promoter-driven transcription and blocked the ability of constitutively active Ras and Raf-1 to costimulate NF-AT activity with a calcium ionophore. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MEK1 MEK1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 constitutively constitutively ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 Ras Ras PROPN NNPS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 costimulate costimulate VERB VB VerbForm=Inf _ _ _ _ 32 NF Nf ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 AT at ADJ JJ Degree=Pos _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 calcium calcium NOUN NN Number=Sing _ _ _ _ 39 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3535 # text = Expression of the MAP kinase-specific phosphatase, MKP-1, which blocks ERK activation, inhibited IL-2 promoter and NF-AT-driven transcription stimulated by a calcium ionophore and PMA, and in addition, MKP-1 neutralized the transcriptional enhancement caused by active Raf-1 and MEK1 expression. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MAP map PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 MKP MKP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 ERK ERK PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 calcium calcium NOUN NN Number=Sing _ _ _ _ 35 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 MKP MKP NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 neutralized neutralize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 50 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 active active ADJ JJ Degree=Pos _ _ _ _ 53 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 MEK1 MEK1 NUM CD NumType=Card _ _ _ _ 58 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3536 # text = We conclude that the MAP kinase signal transduction pathway consisting of Raf-1, MEK1, and ERK1 and ERK2 functions in the stimulation IL-2 gene transcription in activated T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MAP map NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ERK1 ERK1 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 ERK2 ERK2 NUM CD NumType=Card _ _ _ _ 22 functions function NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3537 # text = Document 003001240 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001240 003001240 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3538 # text = Tpl-2 induces IL-2 expression in T-cell lines by triggering multiple signaling pathways that activate NFAT and NF-kappaB. 1 Tpl Tpl VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 -2 -2 NUM CD NumType=Card _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3539 # text = The Tpl-2 kinase activates the nuclear factor of activated T cells (NFAT) and induces IL-2 expression in T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tpl Tpl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3540 # text = Here we show that the activation of the IL-2 promoter by Tpl-2 is inhibited by mutant signaling molecules that inhibit the mitogen-activated protein kinase (MAPK) or the calcineurin/NFAT pathways and is promoted by combinations of signaling molecules that activate these pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 molecules molecule NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 39 pathways pathway NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 combinations combination NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 signaling signal NOUN NN Number=Sing _ _ _ _ 47 molecules molecule NOUN NNS Number=Plur _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 51 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3541 # text = We, therefore, conclude that signals generated by the convergence of the MAPK and the calcineurin/NFAT pathway are necessary and sufficient for the activation of the IL-2 promoter by Tpl-2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 conclude conclude VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 convergence convergence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3542 # text = The activation of both the IL-2 promoter and an NFAT-driven minimal promoter were shown to depend on signals transduced by Raf1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 depend depend VERB VB VerbForm=Inf _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ _ 23 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 Raf1 Raf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3543 # text = However, it was only the IL-2 promoter whose activation by Tpl-2 was fully blocked by the dominant negative mutant MEK1S218/222A and the MEK1/MEK2 inhibitor PD098059. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 fully fully ADV RB _ _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 mutant mutant NOUN NN Number=Sing _ _ _ _ 25 MEK1S218/222A MEK1S218/222a NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 MEK1 Mek1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 MEK2 MEK2 NUM CD NumType=Card _ _ _ _ 31 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 32 PD098059 PD098059 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3544 # text = Since the activation of NFAT is MAPK-dependent these findings suggested that the activation of MAPK by Tpl-2 is either independent or only partially dependent on MEK1 and MEK2. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 findings finding NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 either either CCONJ CC _ _ _ _ _ 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 partially partially ADV RB _ _ _ _ _ 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 MEK1 Mek1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 MEK2 Mek2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3545 # text = In addition, they suggested that the activation of the IL-2 promoter is under the control of not only NFAT but also a second factor whose activation is MEK-dependent. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 NFAT Nfat ADV RB _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 MEK Mek PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3546 # text = Experiments in COS-1 and EL-4 cells confirmed both hypotheses and revealed that the second factor activated by Tpl-2 is NF-kappaB. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 EL EL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 hypotheses hypothese NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3547 # text = While the activation of the IL-2 promoter and an NFAT-driven minimal promoter by Tpl-2 was fully blocked by the dominant negative mutant NFAT delta418, it was only partially blocked by the calcineurin inhibitor cyclosporin A suggesting that the Tpl-2-mediated NFAT activation is under the control of a combination of calcineurin-dependent and independent pathways. 1 While while SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 fully fully ADV RB _ _ _ _ _ 23 blocked blocked VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 mutant mutant NOUN NN Number=Sing _ _ _ _ 29 NFAT NFAT NOUN NN Number=Sing _ _ _ _ 30 delta418 delta418 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 only only ADV RB _ _ _ _ _ 35 partially partially ADV RB _ _ _ _ _ 36 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 40 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 41 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 42 A a NOUN NN Number=Sing _ _ _ _ 43 suggesting suggesting VERB VBG VerbForm=Ger _ _ _ _ 44 that that SCONJ IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 Tpl Tpl NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 52 activation activation NOUN NN Number=Sing _ _ _ _ 53 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 under under ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 control control NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 combination combination NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 independent independent ADJ JJ Degree=Pos _ _ _ _ 66 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 3548 # text = Both pathways were fully blocked by Bcl-2 or Bcl-X(L). 1 Both both DET DT _ _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 fully fully ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3549 # text = Document 003001241 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001241 003001241 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3550 # text = Regulation of cytokine and cytokine receptor expression by glucocorticoids. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3551 # text = Glucocorticoids (GCS) profoundly inhibit several aspects of T cell immunity largely through inhibition of cytokine expression at the transcriptional and posttranscriptional levels. 1 Glucocorticoids Glucocorticoid PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 GCS GCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 profoundly profoundly ADV RB _ _ _ _ _ 6 inhibit inhibit VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 aspects aspect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 immunity immunity NOUN NN Number=Sing _ _ _ _ 13 largely largely ADV RB _ _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3552 # text = GCS were also reported to act indirectly by inducing transforming growth factor-beta expression, which in turn blocks T cell immunity. 1 GCS Gc NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 act act VERB VB VerbForm=Inf _ _ _ _ 7 indirectly indirectly ADV RB _ _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 10 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ _ 20 blocks block NOUN NNS Number=Plur _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3553 # text = In exerting their antiproliferative effects, GCS diffuse into target cells where they bind their cytoplasmic receptor, which in turn translocates to the nucleus where it inhibits transcription of cytokine genes through direct binding to the glucocorticoid response elements (GRE), which are located in the promoter region of cytokine genes or, alternatively, through antagonism of the action of transcription factors required for optimal transcriptional activation. 1 In in SCONJ IN _ _ _ _ _ 2 exerting exert VERB VBG VerbForm=Ger _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GCS Gc NOUN NNS Number=Plur _ _ _ _ 8 diffuse diffuse VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 target target NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 where where ADV WRB PronType=Int _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 turn turn NOUN NN Number=Sing _ _ _ _ 22 translocates translocate NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 26 where where ADV WRB PronType=Rel _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 28 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 direct direct ADJ JJ Degree=Pos _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ _ 51 region region NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ _ 55 or or CCONJ CC _ _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 alternatively alternatively ADV RB _ _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 through through ADP IN _ _ _ _ _ 60 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 action action NOUN NN Number=Sing _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 transcription transcription NOUN NN Number=Sing _ _ _ _ 66 factors factor NOUN NNS Number=Plur _ _ _ _ 67 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 for for ADP IN _ _ _ _ _ 69 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 70 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 71 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 3554 # text = In contrast to their inhibitory effects on cytokine expression, GCS up-regulate cytokine receptor expression that correlates with enhanced cytokine effects on target cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GCS GCS VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 up up ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 target target NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3555 # text = In this review, we summarize the current state of knowledge of the mechanism of action of GCS, including the phenomenon of steroid-induced rebound, which ensues upon GCS withdrawal. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 current current ADJ JJ Degree=Pos _ _ _ _ 9 state state NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 knowledge knowledge NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 action action NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GCS GCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 rebound rebound NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 ensues ensue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 upon upon ADP IN _ _ _ _ _ 32 GCS GCS PROPN NNP Number=Sing _ _ _ _ 33 withdrawal withdrawal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3556 # text = Document 003001242 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001242 003001242 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3557 # text = Selenium-mediated inhibition of transcription factor NF-kappa B and HIV-1 LTR promoter activity. 1 Selenium- Selenium- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3558 # text = The eukaryotic transcription factor NF-kappa B is involved in the inducible expression of various inflammatory genes as well as in HIV-1 replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3559 # text = Activation of NF-kappa B is induced by prooxidants and several stimuli eliciting oxidative stress, such as cytokines, lipopolysaccharide, UV irradiation and other mediators. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 prooxidants prooxidant NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 14 eliciting elicit VERB VBG VerbForm=Ger _ _ _ _ 15 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 16 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 UV UV PROPN NNP Number=Sing _ _ _ _ 25 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3560 # text = Various antioxidants inhibit NF-kappa B activation in response to these stimuli. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 3 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3561 # text = In this study, we have investigated the effects of selenium, an integral component of glutathione peroxidase (GPX), on NF-kappa B activation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 integral integral ADJ JJ Degree=Pos _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 18 peroxidase peroxidase NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GPX GPX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3562 # text = In selenium-deprived Jurkat and ESb-L 1 In in ADP IN _ _ _ _ _ 2 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 deprived deprive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 ESb ESb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 L L PROPN NNP Number=Sing _ _ _ _ # sent_id = 3563 # text = T lymphocytes, supplementation of selenium led to a substantial increase of GPX activity. 1 T t NOUN NN Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 selenium selenium NOUN NN Number=Sing _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GPX GPX ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3564 # text = Analysis of DNA binding revealed that NF-kappa B activation in response to TNF was significantly inhibited under these conditions. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 under under ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3565 # text = Likewise, reporter gene assays using luciferase constructs driven by the HIV-1 long terminal repeat showed a dose-dependent inhibition of NF-kappa B controlled gene expression by selenium. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 reporter reporter NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 constructs construct NOUN NNS Number=Plur _ _ _ _ 9 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 long long ADJ JJ Degree=Pos _ _ _ _ 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 controlled control VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 gene gene ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3566 # text = The effects of selenium were specific for NF-kappa B, since the activity of the transcription factor AP-1 was not suppressed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 selenium selenium NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B B NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3567 # text = These data suggest that selenium supplementation may be used to modulate the expression of NF-kappa B target genes and HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 selenium selenium NOUN NN Number=Sing _ _ _ _ 6 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3568 # text = Document 003001243 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001243 003001243 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3569 # text = Soluble factors secreted by activated T-lymphocytes modulate the transcription of the immunosuppressive cytokine TGF-beta 2 in glial cells. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3570 # text = Coordination of the immune response to injury or disease in the brain is postulated to involve bi-directional discourse between the immune system and the central nervous system. 1 Coordination coordination NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 injury injury NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 brain brain NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 involve involve VERB VB VerbForm=Inf _ _ _ _ 17 bi-directional bi-directional ADJ JJ Degree=Pos _ _ _ _ 18 discourse discourse NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 central central ADJ JJ Degree=Pos _ _ _ _ 26 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3571 # text = This cross communication involves soluble mediators, including various growth factors, cytokines, and neuropeptides. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ _ 3 communication communication NOUN NN Number=Sing _ _ _ _ 4 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 neuropeptides neuropeptide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3572 # text = In this report, we demonstrate that the supernatant from activated T-lymphocytes is able to induce the transcription of a potent cytokine, TGF-beta 2 in glial cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 able able ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 induce induce VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 potent potent NOUN NN Number=Sing _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 glial glial ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3573 # text = The activating stimulus invokes signaling mechanisms distinct from known kinase or protease pathways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activating activating VERB VBG VerbForm=Ger _ _ _ _ 3 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 4 invokes invoke NOUN NNS Number=Plur _ _ _ _ 5 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3574 # text = Activation of TGF-beta 2 transcription correlates with the loss of binding activity for an 80 kDA glial labile repressor protein, GLRP, to a responsive region within the TFG-beta 2 promoter. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 loss loss NOUN NN Number=Sing _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 80 80 NUM CD NumType=Card _ _ _ _ 18 kDA kDa NOUN NN Number=Sing _ _ _ _ 19 glial glial ADJ JJ Degree=Pos _ _ _ _ 20 labile labile NOUN NN Number=Sing _ _ _ _ 21 repressor repressor NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 GLRP GLRP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ _ 30 within within ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 TFG Tfg NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 beta beta NOUN NN Number=Sing _ _ _ _ 35 2 2 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3575 # text = Although GLRP shares some characteristics with the inducible transcription factor AP-1, it appears to be distinct from known AP-1 family members. 1 Although although SCONJ IN _ _ _ _ _ 2 GLRP GLRP PROPN NNP Number=Sing _ _ _ _ 3 shares share VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3576 # text = These data along with previous observations demonstrating the potent immunosuppressive activity of TGF-beta 2, support a model for a feedback mechanism between the activated T-lymphocytes and astrocytes via TGF-beta 2 to regulate the immune response. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 along along ADV RB _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 previous previous ADJ JJ Degree=Pos _ _ _ _ 6 observations observation NOUN NNS Number=Plur _ _ _ _ 7 demonstrating demonstrate VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 potent potent NOUN NN Number=Sing _ _ _ _ 10 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 model model NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 feedback feedback NOUN NN Number=Sing _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 between between ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 32 via via ADP IN _ _ _ _ _ 33 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 2 2 NUM CD NumType=Card _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 immune immune ADJ JJ Degree=Pos _ _ _ _ 41 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3577 # text = Document 003001244 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001244 003001244 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3578 # text = Distinct DNase-I hypersensitive sites are associated with TAL-1 transcription in erythroid and T-cell lines. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 TAL Tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3579 # text = The tal-1 gene, frequently activated in human T-cell acute lymphoblastic leukemia (T-ALL), is expressed in the erythroid, megakaryocytic, and mast cell lineages during normal hematopoiesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 frequently frequently ADV RB _ _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 acute acute NOUN NN Number=Sing _ _ _ _ 14 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ALL All PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 erythroid erythroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mast mast VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lineages lineage NOUN NNS Number=Plur _ _ _ _ 34 during during ADP IN _ _ _ _ _ 35 normal normal ADJ JJ Degree=Pos _ _ _ _ 36 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3580 # text = To gain further insight into the molecular mechanisms that control tal-1 expression, we investigated tal-1 chromatin structure in erythroid/megakaryocytic cell lines and in T-cell lines either with or without tal-1 rearrangements. 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 insight insight ADV RB _ _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 22 structure structure NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ _ 34 either either CCONJ CC _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 without without ADP IN _ _ _ _ _ 38 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3581 # text = Tal-1 transcription was shown to be monoallelic in Jurkat, a T-cell line that expresses tal-1 in the absence of apparent genomic alteration of the locus. 1 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 expresses express VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 27 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 28 alteration alteration NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3582 # text = Methylation studies indicated that the tal-15' GC-rich region behaves like a CpG island, hypomethylated in normal cells, and methylated de novo on transcriptionally inactive alleles in established cell lines. 1 Methylation Methylation NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -15 -15 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT `` _ _ _ _ _ 9 GC Gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 behaves behave NOUN NNS Number=Plur _ _ _ _ 14 like like ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CpG CpG PROPN NNP Number=Sing _ _ _ _ 17 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 hypomethylated hypomethylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 methylated methylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 de de X FW Foreign=Yes _ _ _ _ 27 novo novo ADV RB _ _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 transcriptionally transcriptionally ADV RB _ _ _ _ _ 30 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 31 alleles allele NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3583 # text = Five major DNase-I hypersensitive sites (HS) were mapped in the tal-1 locus. 1 Five five NUM CD NumType=Card _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HS H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3584 # text = HS I, IV, and V were exclusively observed in the erythroid/megakaryocytic cell lines that express tal-1 from the promoters 1a and 1b. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IV iv NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 V V PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 exclusively exclusively ADV RB _ _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 promoters promoter NOUN NNS Number=Plur _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 a a NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3585 # text = HS II was weak in hematopoietic cell lines, absent in Hela, and greatly enhanced in Jurkat, suggesting that this region might be implicated in the cis-activation of tal-1 promoter 1b in this cell line. 1 HS HS PROPN NNP Number=Sing _ _ _ _ 2 II II PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Hela Hela PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 greatly greatly ADV RB _ _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 might might AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cis-activation cis-activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 b b NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3586 # text = HS III was weak in HEL and Jurkat, and greatly enhanced in DU528, a T-cell line that bears a t (1;14) and initiates tal-1 transcription within exon 4. 1 HS HS PROPN NNP Number=Sing _ _ _ _ 2 III III PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HEL HEL PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 greatly greatly ADV RB _ _ _ _ _ 12 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DU528 DU528 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 bears bear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 t t NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 1;14 1;14 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 exon exon NOUN NN Number=Sing _ _ _ _ 35 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3587 # text = These results suggest that distinct regulatory elements are associated with the use of the different tal-1 promoters. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 use use NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3588 # text = Document 003001245 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001245 003001245 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3589 # text = The tax protein of human T-cell leukemia virus type 1 mediates the transactivation of the c-sis/platelet-derived growth factor-B promoter through interactions with the zinc finger transcription factors Sp1 and NGFI-A/Egr-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tax tax NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 c- c- SYM SYM _ _ _ _ SpaceAfter=No 18 sis/ sisith SYM SYM _ _ _ _ SpaceAfter=No 19 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B b NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 interactions interaction NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 zinc zinc NOUN NN Number=Sing _ _ _ _ 32 finger finger NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3590 # text = Transcriptional up-regulation of the c-sis/platelet-derived growth factor-B (PDGF-B) proto-oncogene by the Tax protein of human T-cell leukemia virus type 1 has been implicated as one possible mechanism of cellular transformation by human T-cell leukemia virus type 1. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 sis/ sis/ SYM NFP _ _ _ _ SpaceAfter=No 9 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 B b NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 proto proto PART TO _ _ _ _ SpaceAfter=No 22 -oncogene -oncogene VERB VB VerbForm=Inf _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 type type NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 one one NUM CD NumType=Card _ _ _ _ 40 possible possible ADJ JJ Degree=Pos _ _ _ _ 41 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 44 transformation transformation NOUN NN Number=Sing _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 50 virus virus NOUN NN Number=Sing _ _ _ _ 51 type type NOUN NN Number=Sing _ _ _ _ 52 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3591 # text = In previous work, we identified an essential site in the c-sis/PDGF-B promoter, Tax-responsive element 1 (TRE1), necessary for transactivation by Tax. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TRE1 TRE1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3592 # text = We also identified Sp1, Sp3, and NGFI-A/Egr-1 as the primary nuclear transcription factors binding to TRE1 which mediate Tax responsiveness. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 Sp1 Sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Sp3 Sp3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 TRE1 TRE1 PROPN NNP Number=Sing _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 27 Tax tax NOUN NN Number=Sing _ _ _ _ 28 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3593 # text = In the present work, we have investigated the mechanism(s) whereby Tax transactivates the c-sis/PDGF-B proto-oncogene. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 s s X AFX _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 whereby whereby ADJ JJ Degree=Pos _ _ _ _ 15 Tax Tax NOUN NN Number=Sing _ _ _ _ 16 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b NOUN NN Number=Sing _ _ _ _ 21 proto-oncogene proto-oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3594 # text = In vitro transcription assays showed that Tax was able to significantly increase the transcriptional activity of a template containing the -257 to +74 region of the c-sis/PDGF-B promoter. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Tax Tax PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 increase increase VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 template template NOUN NN Number=Sing _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 257 257 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 + + SYM SYM _ _ _ _ SpaceAfter=No 25 74 74 NUM CD NumType=Card _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 c-sis/PDGF-B c-sis/pdgf-b ADJ JJ Degree=Pos _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3595 # text = Electrophoretic mobility shift assay analysis showed that Tax increased the DNA binding activity of both Sp1 and NGFI-A/Egr-1 using a TRE1 probe. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tax Tax PROPN NNP Number=Sing _ _ _ _ 9 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binde VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 TRE1 tRE1 NUM CD NumType=Card _ _ _ _ 28 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3596 # text = Analysis of Tax mutants showed that two mutants, IEXC29S and IEXL320G, were unable to significantly transactivate the c-sis/PDGF-B promoter. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Tax tax PROPN NNP Number=Sing _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IEXC29 IEXC29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 S S PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IEXL320G IEXL320G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 unable unable ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 B b NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3597 # text = Finally, co-immunoprecipitation analysis revealed that Tax is able to stably bind to both Sp1 and NGFI-A/Egr-1. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 co-immunoprecipitation co-immunoprecipitation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Tax tax PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 stably stably ADV RB _ _ _ _ _ 12 bind bind VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3598 # text = Interestingly, co-immunoprecipitation analysis also revealed that Tax mutant IEXC29S is unable to interact with NGFI-A/Egr-1, whereas Tax mutant IEXL320G is able to interact with NGFI-A/Egr-1. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 co-immunoprecipitation co-immunoprecipitation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tax tax PROPN NNP Number=Sing _ _ _ _ 9 mutant mutant PROPN NNP Number=Sing _ _ _ _ 10 IEXC29 IEXC29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 S S PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unable unable ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 interact interact VERB VB VerbForm=Inf _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 Tax tax NOUN NN Number=Sing _ _ _ _ 27 mutant mutant NOUN NN Number=Sing _ _ _ _ 28 IEXL320G Iexl320g NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 able able ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 interact interact VERB VB VerbForm=Inf _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3599 # text = Document 003001246 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001246 003001246 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3600 # text = Effects of CD45 on NF-kappa B. 1 Effects Effects PROPN NNPS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 3601 # text = Implications for replication of HIV-1. 1 Implications implication NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3602 # text = Increased levels of replication of the HIV type 1 are observed after the activation of infected T cells through the TCR. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3603 # text = However, anti-CD45 antibodies inhibit these effects in cells from infected individuals. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-CD45 anti-CD45 NUM CD NumType=Card _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3604 # text = In this study, we examined interrelationships between CD45 and HIV-1 further. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 interrelationships interrelationship NOUN NNS Number=Plur _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 further further NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3605 # text = We measured effects on the HIV-1 LTR in T cell lines that were stimulated with antibodies against CD45 and in those that lacked the expression of CD45 on their surfaces. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 LTR Ltr NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 19 against against ADP IN _ _ _ _ _ 20 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3606 # text = First, anti-CD45 antibodies did not affect basal but decreased activated levels of expression from the HIV-1 LTR. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-CD45 anti-CD45 NUM CD NumType=Card _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 affect affect VERB VB VerbForm=Inf _ _ _ _ 8 basal basal ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 LTR. LTR. NOUN NN Number=Sing _ _ _ _ # sent_id = 3607 # text = Second, T cells, which lack CD45 and cannot signal via the TCR, supported higher levels of viral replication and gene expression. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 CD45 Cd45 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 11 not not PART RB _ _ _ _ _ 12 signal signal VERB VB VerbForm=Inf _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 higher higher ADJ JJR Degree=Cmp _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3608 # text = This was due to the presence of active NF-kappa B complexes in the nucleus of CD45- T cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 complexes complex NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3609 # text = Additionally, infected T cells displayed lower levels of CD45 on their surfaces. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3610 # text = Thus, CD45 plays an active role in the physiology of T cells and in the replication of HIV-1. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 physiology physiology NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3611 # text = Document 003001247 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001247 003001247 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3612 # text = Astrocytes and glioblastoma cells express novel octamer-DNA binding proteins distinct from the ubiquitous Oct-1 and B cell type Oct-2 proteins. 1 Astrocytes Astrocyte NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 glioblastoma glioblastoma NOUN NN Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3613 # text = The 'octamer' sequence, ATGCAAAT or its complement ATTTGCAT, is a key element for the transcriptional regulation of immunoglobulin genes in B-lymphocytes as well as a number of housekeeping genes in all cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 3 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ATGCAAAT Atgcaaat NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 complement complement NOUN NN Number=Sing _ _ _ _ 11 ATTTGCAT Atttgcat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 key key ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 28 as as ADV RB _ _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 number number NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 housekeeping housekeeping NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 all all DET DT _ _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3614 # text = In lymphocytes, the octamer-binding protein Oct-2A and variants thereof are thought to contribute to the B-cell specific gene expression, while the ubiquitous protein Oct-1 seems to control general octamer site-dependent transcription. 1 In in ADP IN _ _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 octamer-binding octamer-binding ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 Oct-2 Oct-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 variants variant NOUN NNS Number=Plur _ _ _ _ 11 thereof thereof CCONJ CC Typo=Yes _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 control control VERB VB VerbForm=Inf _ _ _ _ 35 general general ADJ JJ Degree=Pos _ _ _ _ 36 octamer octamer NOUN NN Number=Sing _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3615 # text = Various other genes, for example interleukin-1 and MHC class II genes, contain an octamer sequence in the promoter and are expressed in cells of both the immune and nervous systems. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 example example NOUN NN Number=Sing _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 both both CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 immune immune ADJ JJ Degree=Pos _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 34 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3616 # text = This prompted us to analyze the octamer-binding proteins in the latter cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 prompted prompt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 latter latter ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3617 # text = Using the electrophoretic mobility shift assay, at least six novel octamer binding proteins were detected in nuclear extracts of cultured mouse astrocytes. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 at at ADV RB _ _ _ _ _ 9 least least ADV RBS Degree=Sup _ _ _ _ 10 six six NUM CD NumType=Card _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 octamer octamer NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3618 # text = These proteins are differentially expressed in human glioblastoma and neuroblastoma cell lines. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 differentially differentially ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 glioblastoma glioblastoma NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3619 # text = The nervous system-derived (N-Oct) proteins bound to the octamer DNA sequence in a manner which is indistinguishable from the Oct-1 and Oct-2A proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 bound bound ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 octamer octamer NOUN NN Number=Sing _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2A 2A PROPN NNP Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3620 # text = The relationship of the N-Oct proteins to Oct-1 and Oct-2A was analyzed by proteolytic clipping bandshift assays and by their reactivity towards antisera raised against recombinant Oct-1 and Oct-2A proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 relationship relationship NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Oct Oct PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 19 clipping clipping NOUN NN Number=Sing _ _ _ _ 20 bandshift bandshift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 assays assays NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 26 towards towards ADP IN _ _ _ _ _ 27 antisera antisera NOUN NN Number=Sing _ _ _ _ 28 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 against against ADP IN _ _ _ _ _ 30 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 -1 -1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2A 2A PROPN NNP Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3621 # text = On the basis of these assays, all N-Oct-factors were found to be distinct from the ubiquitous Oct-1 and the lymphoid-specific Oct-2A proteins. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 22 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3622 # text = In melanoma cells that contain the N-Oct-3 factor, a transfected lymphocyte-specific promoter was neither activated nor was it repressed upon contransfection with an Oct-2A expression vector. 1 In in ADP IN _ _ _ _ _ 2 melanoma melanoma ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 neither neither ADV RB _ _ _ _ _ 21 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 repressed repress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 upon upon ADP IN _ _ _ _ _ 27 contransfection contransfection NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3623 # text = We therefore speculate that N-Oct-3 and other N-Oct factors have a specific role in gene expression in cells of the nervous system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 N- N- SYM NFP _ _ _ _ SpaceAfter=No 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Oct Oct PROPN NNP Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3624 # text = Document 003001248 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001248 003001248 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3625 # text = CD40 is a functional activation antigen and B7-independent T cell costimulatory molecule on normal human lung fibroblasts. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 lung lung NOUN NN Number=Sing _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3626 # text = CD40 is an important signaling and activation 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ # sent_id = 3627 # text = Ag found on certain bone marrow-derived cells. 1 Ag ag PROPN NNP Number=Sing _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 certain certain ADJ JJ Degree=Pos _ _ _ _ 5 bone bone NOUN NN Number=Sing _ _ _ _ 6 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3628 # text = Recently, CD40 also has been shown to be expressed by mesenchymal cells, including human fibroblasts. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 mesenchymal mesenchymal ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3629 # text = Little is known about the role of CD40 in fibroblasts. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 about about ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3630 # text = The current study investigates the hypothesis that CD40 expressed on lung fibroblasts is an activation structure and mechanism for interaction with hemopoietic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 current current ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 investigates investigate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 lung lung NOUN NN Number=Sing _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3631 # text = Communication between resident tissue fibroblasts and T cells is necessary for normal wound healing, and can be pathologic, resulting in tissue fibrosis. 1 Communication communication NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 resident resident ADJ JJ Degree=Pos _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 T t NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 wound wound NOUN NN Number=Sing _ _ _ _ 14 healing healing NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 pathologic pathologic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ _ 24 fibrosis fibrosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3632 # text = Signaling through CD40 with soluble CD40 ligand stimulated fibroblast activation, as evidenced by mobilization of nuclear factor-kappaB and by induction of the proinflammatory and chemoattractant cytokines IL-6 and IL-8. IFN-gamma-primed lung fibroblasts costimulate T lymphocyte proliferation utilizing CD40, but not the well-studied costimulatory molecules B7-1 and B7-2. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 chemoattractant chemoattractant ADJ JJ Degree=Pos _ _ _ _ 27 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 6 6 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ 36 IFN-gamma IFN-gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 lung lung NOUN NN Number=Sing _ _ _ _ 40 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 41 costimulate costimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 T t NUM CD NumType=Card _ _ _ _ 43 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 44 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 45 utilizing utilize VERB VBG VerbForm=Ger _ _ _ _ 46 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 but but CCONJ CC _ _ _ _ _ 49 not not ADV RB _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 55 molecules molecule NOUN NNS Number=Plur _ _ _ _ 56 B benefit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 57 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 B7 B7 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 - - SYM SYM _ _ _ _ SpaceAfter=No 63 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 3633 # text = Data reported herein support the hypothesis that cognate interactions between tissue fibroblasts and infiltrating T lymphocytes, via the CD40/CD40L pathway, augment inflammation and may promote fibrogenesis by activating both cell types. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 herein herein ADV RB _ _ _ _ _ 4 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 cognate cognate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 interactions interaction NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CD40/CD40L Cd40/cd40l NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 augment augment NOUN NN Number=Sing _ _ _ _ 24 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 promote promote VERB VB VerbForm=Inf _ _ _ _ 28 fibrogenesis fibrogenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 activating activate VERB VBG VerbForm=Ger _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3634 # text = Document 003001249 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001249 003001249 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3635 # text = A factor that regulates the class II major histocompatibility complex gene DPA is a member of a subfamily of zinc finger proteins that includes a Drosophila developmental control protein. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 DPA DPA PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 member member NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 subfamily subfamily NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 zinc zinc NOUN NN Number=Sing _ _ _ _ 21 finger finger NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 27 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3636 # text = A novel DNA sequence element termed the J element involved in the regulated expression of class II major histocompatibility complex genes was recently described. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 termed term VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 J j PROPN NNP Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 class class NOUN NN Number=Sing _ _ _ _ 17 II ii NUM CD NumType=Card _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 recently recently ADV RB _ _ _ _ _ 24 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3637 # text = To study this element and its role in class II gene regulation further, a cDNA library was screened with oligonucleotide probes containing both the S element and the nearby J element of the human DPA gene. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 7 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 further further ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 18 library library NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 screened screen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 23 probes probe NOUN NNS Number=Plur _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 S s NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nearby nearby ADJ JJ Degree=Pos _ _ _ _ 32 J j NOUN NN Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 DPA DPA PROPN NNP Number=Sing _ _ _ _ 38 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3638 # text = Several DNA clones were obtained by this procedure, one of which, clone 18, is reported and characterized here. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 one one NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 clone clone NOUN NN Number=Sing _ _ _ _ 15 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3639 # text = It encodes a protein predicted to contain 688 amino acid residues, including 11 zinc finger motifs of the C2H2 type in the C-terminal region, that are Kruppel-like in the conservation of the H/C link sequence connecting them. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 contain contain VERB VB VerbForm=Inf _ _ _ _ 8 688 688 NUM CD NumType=Card _ _ _ _ 9 amino amino DET DT _ _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 11 11 NUM CD NumType=Card _ _ _ _ 15 zinc zinc NOUN NN Number=Sing _ _ _ _ 16 finger finger NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 C2H2 C2h2 NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 like like ADP IN _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 conservation conservation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 H/ h/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 C c NOUN NN Number=Sing _ _ _ _ 40 link link NOUN NN Number=Sing _ _ _ _ 41 sequence sequence NOUN NN Number=Sing _ _ _ _ 42 connecting connect VERB VBG VerbForm=Ger _ _ _ _ 43 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3640 # text = The 160 N-terminal amino acids in the nonfinger region of clone 18 are highly homologous with similar regions of several other human, mouse, and Drosophila sequences, defining a subfamily of Kruppel-like zinc finger proteins termed TAB (tramtrack [ttk]-associated box) here. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 160 160 NUM CD NumType=Card _ _ _ _ 3 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 amino amino DET DT _ _ _ _ _ 6 acids acid NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nonfinger nonfinger NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ _ 13 18 18 NUM CD NumType=Card _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 regions region NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 human human NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 defining define VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 subfamily subfamily NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 like like ADJ JJ Degree=Pos _ _ _ _ 38 zinc zinc NOUN NN Number=Sing _ _ _ _ 39 finger finger NOUN NN Number=Sing _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ _ 41 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 TAB Tab NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 tramtrack tramtrack NOUN NN Number=Sing _ _ _ _ 45 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 ttk ttk NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3641 # text = One of the Drosophila sequences, ttk, is a developmental control gene, while a second does not contain a zinc finger region but encodes a structure important in oocyte development. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ttk ttk NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 contain contain VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 zinc zinc NOUN NN Number=Sing _ _ _ _ 23 finger finger NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 structure structure NOUN NN Number=Sing _ _ _ _ 29 important important ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 oocyte oocyte ADJ JJ Degree=Pos _ _ _ _ 32 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3642 # text = An acidic activation domain is located between the N-terminal conserved region of clone 18 and its zinc fingers. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 clone clone NOUN NN Number=Sing _ _ _ _ 15 18 18 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 zinc zinc NOUN NN Number=Sing _ _ _ _ 19 fingers finger NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3643 # text = This protein appears to require both the S and J elements, which are separated by 10 bp for optimal binding. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 require require VERB VB VerbForm=Inf _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 S s NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 J j NOUN NN Number=Sing _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 10 10 NUM CD NumType=Card _ _ _ _ 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 21 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3644 # text = Antisense cDNA to clone 18 inhibited the expression of a reporter construct containing the DPA promoter, indicating its functional importance in the expression of this class II gene. 1 Antisense Antisense ADJ JJ Degree=Pos _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 clone clone VERB VB VerbForm=Inf _ _ _ _ 5 18 18 NUM CD NumType=Card _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DPA DPA PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 importance importance NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 class class NOUN NN Number=Sing _ _ _ _ 28 II ii NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3645 # text = Document 003001250 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001250 003001250 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3646 # text = Activation of nuclear factor-kappa B by beta-amyloid peptides and interferon-gamma in murine microglia. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 amyloid amyloid ADJ JJ Degree=Pos _ _ _ _ 12 peptides peptide NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 murine murine ADJ JJ Degree=Pos _ _ _ _ 19 microglia microglia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3647 # text = An increasing body of evidence suggests that amyloid-beta (A beta) peptides and microglia are crucially involved in the pathogenesis of Alzheimer's disease. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 body body NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 amyloid amyloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 peptides peptide NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 microglia microglion NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 crucially crucially ADV RB _ _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Alzheimer Alzheimer PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 's 's PART POS _ _ _ _ _ 27 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3648 # text = In an effort to further elucidate the biological effects of A beta towards microglia, we investigated the ability of A beta peptides to activate nuclear factor (NF)-kappa B in the N9 murine microglial cell line. 1 In in ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 effort effort NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 further further ADV RB _ _ _ _ _ 6 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 biological biological ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 towards towards ADP IN _ _ _ _ _ 14 microglia microglion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 peptides peptide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 activate activate VERB VB VerbForm=Inf _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 N9 N9 PROPN NNP Number=Sing _ _ _ _ 37 murine murine NOUN NN Number=Sing _ _ _ _ 38 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3649 # text = Co-stimulation of microglia with suboptimal concentrations of A beta(25-35) and 100 U/ml IFN gamma resulted in the detection of a specific NF-kappa B DNA-binding activity in nuclear extracts, as determined in gel mobility shift assays. 1 Co-stimulation Co-stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 microglia microglia NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 6 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -35 -35 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 100 100 NUM CD NumType=Card _ _ _ _ 16 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ml ml NOUN NN Number=Sing _ _ _ _ 18 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 19 gamma gamma PROPN NNP Number=Sing _ _ _ _ 20 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 detection detection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 as as SCONJ IN _ _ _ _ _ 40 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 gel gel NOUN NN Number=Sing _ _ _ _ 43 mobility mobility NOUN NN Number=Sing _ _ _ _ 44 shift shift NOUN NN Number=Sing _ _ _ _ 45 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3650 # text = This response required at least 120 min to be evident and supershift experiments revealed that the NF-kappa B complex contains both RelA and p50. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADV RB _ _ _ _ _ 5 least least ADV RBS Degree=Sup _ _ _ _ 6 120 120 NUM CD NumType=Card _ _ _ _ 7 min min NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 evident evident ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 contains contain NOUN NNS Number=Plur _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 RelA Rela NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3651 # text = Accordingly, immunoblot experiments showed that amongst NF-kappa B/Rel proteins, RelA and p50 are mobilized to the nucleus following microglial cell stimulation with A beta(25-35) plus IFN gamma. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 amongst amongst ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 RelA Rela PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mobilized mobilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 plus plus CCONJ CC _ _ _ _ _ 37 IFN IFN PROPN NNP Number=Sing _ _ _ _ 38 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3652 # text = Higher concentrations of A beta(25-35) were effective by themselves in inducing NF-kappa B activation, both in the N9 microglial cell line and in rat primary microglia, as well as in human monocytes. 1 Higher Higher DET DT _ _ _ _ _ 2 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 effective effective ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 themselves themselves PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 N9 N9 PROPN NNP Number=Sing _ _ _ _ 27 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 rat rat NOUN NN Number=Sing _ _ _ _ 33 primary primary ADJ JJ Degree=Pos _ _ _ _ 34 microglia microglia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 as as ADV RB _ _ _ _ _ 37 well well ADV RB Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3653 # text = For purposes of comparison, microglia were also stimulated with bacterial LPS, a known NF-kappa B inducer. 1 For for ADP IN _ _ _ _ _ 2 purposes purpose NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 microglia microglia NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 inducer inducer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3654 # text = As expected, LPS strongly induced the formation of two NF-kappa B DNA-binding activities, one of which was identified as RelA/p50. 1 As as ADP IN _ _ _ _ _ 2 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 strongly strongly ADV RB _ _ _ _ _ 6 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3655 # text = The LPS response was also more rapid, as it was already evident by 40 min and remained sustained for up to 3 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 LPS LPS PROPN NNP Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 more more ADV RBR _ _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 already already ADV RB _ _ _ _ _ 13 evident evident ADJ JJ Degree=Pos _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 40 40 NUM CD NumType=Card _ _ _ _ 16 min min NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ _ 24 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3656 # text = Collectively, these findings indicate that NF-kappa B activation might constitute one of the mechanisms underlying the inducible expression of kappa B-dependent genes in microglia stimulated by A beta peptides and IFN gamma, or by LPS. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 microglia microglion NOUN NNS Number=Plur _ _ _ _ 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 peptides peptide NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 37 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3657 # text = Document 003001251 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001251 003001251 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3658 # text = Potent inhibition of HIV type 1 replication by an antiinflammatory alkaloid, cepharanthine, in chronically infected monocytic cells. 1 Potent potent ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 replication replication NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 11 alkaloid alkaloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 chronically chronically ADV RB _ _ _ _ _ 17 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3659 # text = Cepharanthine is a biscoclaurine alkaloid isolated from Stephania cepharantha Hayata and has been shown to have antiinflammatory, antiallergic, and immunomodulatory activities in vivo. 1 Cepharanthine Cepharanthine PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 biscoclaurine biscoclaurine NOUN NN Number=Sing _ _ _ _ 5 alkaloid alkaloid NOUN NN Number=Sing _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 Stephania Stephania PROPN NNP Number=Sing _ _ _ _ 9 cepharantha cepharantha PROPN NNP Number=Sing _ _ _ _ 10 Hayata Hayata PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 have have VERB VB VerbForm=Inf _ _ _ _ 17 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 antiallergic antiallergic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3660 # text = As several inflammatory cytokines and oxidative stresses are involved in the pathogenesis of HIV-1 infection, we investigated the inhibitory effects of cepharanthine on tumor necrosis factor alpha (TNF-alpha)- and phorbol 12-myristate 13-acetate (PMA)-induced HIV-1 replication in chronically infected cell lines. 1 As as ADP IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 7 stresses stress NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 tumor tumor NOUN NN Number=Sing _ _ _ _ 28 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 - - PUNCT : _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 39 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 myristate myristate NOUN NN Number=Sing _ _ _ _ 42 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT : _ _ _ _ SpaceAfter=No 44 acetate acetate NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ _ 53 replication replication NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 chronically chronically ADV RB _ _ _ _ _ 56 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3661 # text = Two chronically HIV-1-infected cell lines, U1 (monocytic) and ACH-2 (T lymphocytic), were stimulated with TNF-alpha or PMA and cultured in the presence of various concentrations of the compound. 1 Two two NUM CD NumType=Card _ _ _ _ 2 chronically chronically NOUN NN Number=Sing _ _ _ _ 3 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 U1 U1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 T t NOUN NN Number=Sing _ _ _ _ 21 lymphocytic lymphocytic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 presence presence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 various various ADJ JJ Degree=Pos _ _ _ _ 39 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 compound compound NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3662 # text = HIV-1 replication was determined by p24 antigen level. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 p24 p24 NUM CD NumType=Card _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3663 # text = The inhibitory effects of cepharanthine on HIV-1 long terminal repeat (LTR)-driven gene expression and nuclear factor kappaB (NF-kappaB) activation were also examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 also also ADV RB _ _ _ _ _ 32 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3664 # text = Cepharanthine dose dependently inhibited HIV-1 replication in TNF-alpha- and PMA-stimulated U1 cells but not in ACH-2 cells. 1 Cepharanthine Cepharanthine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 dose dose PRON DT Number=Plur|PronType=Dem _ _ _ _ 3 dependently dependently ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 U1 u1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 ACH ACH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3665 # text = Its 50% effective and cytotoxic concentrations were 0.016 and 2.2 microg/ml in PMA-stimulated U1 cells, respectively. 1 Its it PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 % % SYM NN Number=Sing _ _ _ _ 4 effective effective ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 0.016 0.016 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 2.2 2.2 NUM CD NumType=Card _ _ _ _ 12 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 ml ml NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 U1 u1 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3666 # text = Cepharanthine was found to suppress HIV-1 LTR-driven gene expression through the inhibition of NF-kappaB activation. 1 Cepharanthine Cepharanthine PRON PRP _ _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3667 # text = These results indicate that cepharanthine is a highly potent inhibitor of HIV-1 replication in a chronically infected monocytic cell line. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 cepharanthine cepharanthine PRON PRP _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 highly highly ADV RB _ _ _ _ _ 9 potent potent ADJ JJ Degree=Pos _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3668 # text = Since biscoclaurine alkaloids, containing cepharanthine as a major component, are widely used for the treatment of patients with various inflammatory diseases in Japan, cepharanthine should be further pursued for its chemotherapeutic potential in HIV-1-infected patients. 1 Since since SCONJ IN _ _ _ _ _ 2 biscoclaurine biscoclaurine NOUN NN Number=Sing _ _ _ _ 3 alkaloids alkaloid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 widely widely ADV RB _ _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 patients patient NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Japan Japan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 cepharanthine cepharanthine PRON PRP _ _ _ _ _ 28 should should AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 further further ADV RB _ _ _ _ _ 31 pursued pursue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 chemotherapeutic chemotherapeutic ADJ JJ Degree=Pos _ _ _ _ 35 potential potential NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3669 # text = Document 003001252 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001252 003001252 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3670 # text = Activation of Stat 5b in erythroid progenitors correlates with the ability of ErbB to induce sustained cell proliferation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Stat Stat PROPN NNP Number=Sing _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 b b NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 9 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 induce induce VERB VB VerbForm=Inf _ _ _ _ 17 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3671 # text = Self renewal of normal erythroid progenitors is induced by the receptor tyrosine kinase c-ErbB, whereas other receptors (c-Kit/Epo-R) regulate erythroid differentiation. 1 Self self NOUN NN Number=Sing _ _ _ _ 2 renewal renewal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 6 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 c- c- PUNCT , _ _ _ _ SpaceAfter=No 15 ErbB ErbB NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3672 # text = To address possible mechanisms that could explain this selective activity of c-ErbB, we analyzed the ability of these receptors to activate the different members of the Stat transcription factor family. 1 To to PART TO _ _ _ _ _ 2 address address VERB VB VerbForm=Inf _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 explain explain VERB VB VerbForm=Inf _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 ErbB ErbB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Stat Stat PROPN NNP Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3673 # text = Ligand activation of c-ErbB induced the tyrosine phosphorylation, DNA-binding, and reporter gene transcription of Stat 5b in erythroblasts. 1 Ligand Ligand NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 7 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Stat Stat PROPN NNP Number=Sing _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 b b NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3674 # text = In contrast, ligand activation of c-Kit was unable to induce any of these effects in the same cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 ligand ligand NUM CD NumType=Card _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Kit Kit NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 unable unable ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 any any DET DT _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 same same ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3675 # text = Activation of the erythropoietin receptor caused specific DNA-binding of Stat 5b, but failed to induce reporter gene transcription. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Stat Stat PROPN NNP Number=Sing _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 reporter reporter NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3676 # text = These biochemical findings correlate perfectly with the selective ability of c-ErbB to cause sustained self renewal in erythroid progenitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 findings finding NOUN NNS Number=Plur _ _ _ _ 4 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 perfectly perfectly ADV RB _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 self self NOUN NN Number=Sing _ _ _ _ 17 renewal renewal NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3677 # text = Document 003001253 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001253 003001253 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3678 # text = Identification of human TR2 orphan receptor response element in the transcriptional initiation site of the simian virus 40 major late promoter [published erratum appears in J Biol Chem 1995 Nov 3;270(44):26721] 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 5 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 simian simian ADJ JJ Degree=Pos _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 40 40 NUM CD NumType=Card _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 late late ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 erratum erratum NOUN NN Number=Sing _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 J j PROPN NNP Number=Sing _ _ _ _ 28 Biol Biol PROPN NNP Number=Sing _ _ _ _ 29 Chem Chem PROPN NNP Number=Sing _ _ _ _ 30 1995 1995 NUM CD NumType=Card _ _ _ _ 31 Nov Nov PROPN NNP Number=Sing _ _ _ _ 32 3;270 3;270 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 44) 44) SYM NFP _ _ _ _ SpaceAfter=No 35 :26721 :26721 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 3679 # text = A DNA response element (TR2RE-SV40) for the TR2 orphan receptor, a member of the steroid-thyroid hormone receptor superfamily, has been identified in the simian virus 40 (SV40) +55 region (nucleotide numbers 368-389, 5'-GTTAAGGTTCGTAGGTCATGGA-3'). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 SV40 SV40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 13 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 member member NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 23 hormone hormone NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 simian simian ADJ JJ Degree=Pos _ _ _ _ 33 virus virus NOUN NN Number=Sing _ _ _ _ 34 40 40 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 SV40 SV40 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 +55 +55 NUM CD NumType=Card _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 42 numbers number NOUN NNS Number=Plur _ _ _ _ 43 368-389 368-389 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 47 -GTTAAGGTTCGTAGGTCATGGA -GTTAAGGTTCGTAGGTCATGGa NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3680 # text = Electrophoretic mobility shift assay, using in vitro translated TR2 orphan receptor with a molecular mass of 67 kilodaltons, showed a specific binding with high affinity (dissociation constant = 9 nM) for this DNA sequence. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro PROPN NNP Number=Sing _ _ _ _ 9 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TR2 TR2 NUM CD NumType=Card _ _ _ _ 11 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 mass mass NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 67 67 NUM CD NumType=Card _ _ _ _ 19 kilodaltons kilodalton NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 affinity affinity NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 30 constant constant NOUN NN Number=Sing _ _ _ _ 31 = = SYM SYM _ _ _ _ _ 32 9 9 NUM CD NumType=Card _ _ _ _ 33 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 DNA dna NOUN NN Number=Sing _ _ _ _ 38 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3681 # text = DNA-swap experiments using chloramphenicol acetyl-transferase assay demonstrated that androgen can suppress the transcriptional activities of SV40 early promoter via the interaction between this TR2RE-SV40 and the chimeric receptor AR/TR2/AR with the DNA-binding domain of the TR2 orphan receptor flanked by the N-terminal and androgen-binding domains of the androgen receptor. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 swap swap NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 6 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 transferase transferase NOUN NN Number=Sing _ _ _ _ 9 assay assay NOUN NN Number=Sing _ _ _ _ 10 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 androgen androgen NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SV40 SV40 NUM CD NumType=Card _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 interaction interaction NOUN NN Number=Sing _ _ _ _ 25 between between ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 AR/TR2/ AR/TR2/ PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AR be NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 domain domain NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 45 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ _ 47 flanked flank VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 terminal terminal NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 androgen androgen NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 -binding -binding VERB VBG VerbForm=Ger _ _ _ _ 55 domains domain NOUN NNS Number=Plur _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 59 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 3682 # text = In addition, this TR2RE-SV40 can function as a repressor to suppress the transcriptional activities of both SV40 early and late promoters. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 function function VERB VB VerbForm=Inf _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 repressor repressor NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 late late ADJ JJ Degree=Pos _ _ _ _ 24 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3683 # text = Together, these data suggest the TR2RE-SV40 may represent the first identified natural DNA response element for the TR2 orphan receptor that may function as a repressor for the SV40 gene expression. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 represent represent VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 first first ADV RBS _ _ _ _ _ 14 identified identify ADJ JJ Degree=Pos _ _ _ _ 15 natural natural ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 22 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 function function VERB VB VerbForm=Inf _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 repressor repressor NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3684 # text = Document 003001254 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001254 003001254 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3685 # text = T cell priming enhances IL-4 gene expression by increasing nuclear factor of activated T cells. 1 T t NOUN NN Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 priming priming VERB VBG VerbForm=Ger _ _ _ _ 4 enhances enhance NOUN NNS Number=Plur _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3686 # text = The repetitive activation of T cells (priming) enhances the expression of many cytokines, such as IL-4, but not others, such as IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 repetitive repetitive ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 priming priming NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 many many ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3687 # text = Molecular mechanisms underlying selective expression of cytokines by T cells remain poorly understood. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 4 selective selective ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 13 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3688 # text = Here we show that priming of CD4 T cells selectively enhances IL-4 expression relative to IL-2 expression by a transcriptional mechanism involving nuclear factor of activated T cells (NFAT) proteins. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 priming priming VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 enhances enhance NOUN NNS Number=Plur _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 relative relative ADV RB _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 26 involving involve VERB VBG VerbForm=Ger _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3689 # text = As detected by in vivo footprinting, priming markedly increases the activation-dependent engagement of the P0 and P1 NFAT-binding elements of the IL-4 promoter. 1 As as SCONJ IN _ _ _ _ _ 2 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 footprinting footprinting NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 priming prim VERB VBG VerbForm=Ger _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 engagement engagement NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 P0 P0 PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 P1 P1 PROPN NNP Number=Sing _ _ _ _ 21 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3690 # text = Moreover, each proximal P element is essential for optimal IL-4 promoter activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 each each DET DT _ _ _ _ _ 4 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 5 P p NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3691 # text = Activated primed CD4 T cells contain more NFAT1 and support greater NFAT-directed transcription than unprimed CD4 T cells, while activator protein 1 binding and activator protein 1-mediated transcription by both cell types is similar. 1 Activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 more more ADJ JJR Degree=Cmp _ _ _ _ 8 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 greater greater ADJ JJR Degree=Cmp _ _ _ _ 12 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 18 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 while while SCONJ IN _ _ _ _ _ 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 types type NOUN NNS Number=Plur _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3692 # text = Increased expression of wild-type NFAT1 substantially increases IL-4 promoter activity in unprimed CD4 T cells, suggesting NFAT1 may be limiting for IL-4 gene expression in this cell type. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 8 substantially substantially ADV RB _ _ _ _ _ 9 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 17 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggesting VERB VBG VerbForm=Ger _ _ _ _ 22 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 limiting limit VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3693 # text = Furthermore, a truncated form of NFAT1 acts as a dominant-negative, reducing IL-4 promoter activity in primed CD4 T cells and confirming the importance of endogenous NFAT to increased IL-4 gene expression by effector T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 form form NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 8 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dominant dominant NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 negative negative NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 primed prim ADJ JJ Degree=Pos _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 importance importance NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 32 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 4 4 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 effector effector NOUN NN Number=Sing _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3694 # text = NFAT1 appears to be the major NFAT family member responsible for the initial increased expression of IL-4 by primed CD4 T cells. 1 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 member member NOUN NN Number=Sing _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initial initial ADJ JJ Degree=Pos _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3695 # text = Document 003001255 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001255 003001255 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3696 # text = Host defense mechanisms triggered by microbial lipoproteins through toll-like receptors. 1 Host host ADJ JJ Degree=Pos _ _ _ _ 2 defense defense NOUN NN Number=Sing _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 7 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like ADJ JJ Degree=Pos _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3697 # text = The generation of cell-mediated immunity against many infectious pathogens involves the production of interleukin-12 (IL-12), a key signal of the innate immune system. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 immunity immunity NOUN NN Number=Sing _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 many many ADJ JJ Degree=Pos _ _ _ _ 10 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 11 pathogens pathogen NOUN NNS Number=Plur _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -12 -12 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 key key ADJ JJ Degree=Pos _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 innate innate ADJ JJ Degree=Pos _ _ _ _ 30 immune immune ADJ JJ Degree=Pos _ _ _ _ 31 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3698 # text = Yet, for many pathogens, the molecules that induce IL-12 production by macrophages and the mechanisms by which they do so remain undefined. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 many many ADJ JJ Degree=Pos _ _ _ _ 5 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 12 12 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 23 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 so so ADV RB _ _ _ _ _ 25 remain remain VERB VB VerbForm=Inf _ _ _ _ 26 undefined undefin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3699 # text = Here it is shown that microbial lipoproteins are potent stimulators of IL-12 production by human macrophages, and that induction is mediated by Toll-like receptors (TLRs). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 7 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 potent potent ADJ JJ Degree=Pos _ _ _ _ 10 stimulators stimulator NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 12 12 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 Toll toll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 like like ADP IN _ _ _ _ _ 29 receptors receptor NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TLRs TLRs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3700 # text = Several lipoproteins stimulated TLR-dependent transcription of inducible nitric oxide synthase and the production of nitric oxide, a powerful microbicidal pathway. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TLR Tlr ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 11 oxide oxide NOUN NN Number=Sing _ _ _ _ 12 synthase synthase NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 18 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 22 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 23 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3701 # text = Activation of TLRs by microbial lipoproteins may initiate innate defense mechanisms against infectious pathogens. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TLRs TLR NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 6 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 9 innate innate ADJ JJ Degree=Pos _ _ _ _ 10 defense defense NOUN NN Number=Sing _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 against against ADP IN _ _ _ _ _ 13 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 14 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3702 # text = Document 003001256 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001256 003001256 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3703 # text = Interleukin (IL)-10 inhibits nuclear factor kappa B (NF kappa B) activation in human monocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B B NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3704 # text = IL-10 and IL-4 suppress cytokine synthesis by different mechanisms. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 suppress suppress NOUN NN Number=Sing _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3705 # text = Our previous studies in human monocytes have demonstrated that interleukin (IL)-10 inhibits lipopolysaccharide (LPS)-stimulated production of inflammatory cytokines, IL-1 beta, IL-6, IL-8, and tumor necrosis factor (TNF)-alpha by blocking gene transcription. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 10 10 NUM CD NumType=Card _ _ _ _ 16 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 tumor tumor NOUN NN Number=Sing _ _ _ _ 43 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 alpha alpha ADV RB _ _ _ _ _ 50 by by SCONJ IN _ _ _ _ _ 51 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 52 gene gene ADJ JJ Degree=Pos _ _ _ _ 53 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3706 # text = Using electrophoretic mobility shift assays (EMSA), we now show that, in monocytes stimulated with LPS or TNF alpha, IL-10 inhibits nuclear stimulation of nuclear factor kappa B (NF kappa 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 now now ADV RB _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 3707 # text = B), a transcription factor involved in the expression of inflammatory cytokine genes. 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3708 # text = Several other transcription factors including NF-IL-6, AP-1, AP-2, GR, CREB, Oct-1, and Sp-1 are not affected by IL-10. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 including include VERB VBG VerbForm=Ger _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Sp sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -1 -1 NUM CD NumType=Card _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3709 # text = This selective inhibition by IL-10 of NF kappa B activation occurs rapidly and in a dose-dependent manner and correlates well with IL-10's cytokine synthesis inhibitory activity in terms of both kinetics and dose responsiveness. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 occurs occur NOUN NNS Number=Plur _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 well well ADV RB Degree=Pos _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 10's 10' NOUN NNS Number=Plur _ _ _ _ 29 cytokine cytokine PRON PRP _ _ _ _ _ 30 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 terms term NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 both both DET DT _ _ _ _ _ 37 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 dose dose DET DT Number=Plur|PronType=Dem _ _ _ _ 40 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3710 # text = Furthermore, compounds such as tosylphenylalanyl chloromethyl ketone and pyrrolidinedithiocarbamate that are known to selectively inhibit NF kappa B activation block cytokine gene transcription in LPS-stimulated monocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 compounds compound NOUN NNS Number=Plur _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 tosylphenylalanyl tosylphenylalanyl ADJ JJ Degree=Pos _ _ _ _ 7 chloromethyl chloromethyl NOUN NN Number=Sing _ _ _ _ 8 ketone ketone NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 selectively selectively ADV RB _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 block block NOUN NN Number=Sing _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3711 # text = Taken together, these results suggest that inhibition of NF kappa B activation may be an important mechanism for IL-10 suppression of cytokine gene transcription in human monocytes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 10 10 NUM CD NumType=Card _ _ _ _ 23 suppression suppression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3712 # text = IL-4, another cytokine that inhibits cytokine mRNA accumulation in monocytes, shows little inhibitory effect on LPS-induced NF kappa B activation. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 another another DET DT _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cytokine cytokine PRON PRP _ _ _ _ _ 10 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 little little ADJ JJ Degree=Pos _ _ _ _ 17 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF Nf PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3713 # text = Further examination reveals that, unlike IL-10, IL-4 enhances mRNA degradation and does not suppress cytokine gene transcription. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 examination examination NOUN NN Number=Sing _ _ _ _ 3 reveals reveal NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 unlike unlike ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 mRNA mRNa SYM SYM _ _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 21 cytokine cytokine PRON PRP _ _ _ _ _ 22 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3714 # text = These data indicate that IL-10 and IL-4 inhibit cytokine production by different mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3715 # text = Document 003001257 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001257 003001257 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3716 # text = Role of ascorbate in the activation of NF-kappaB by tumour necrosis factor-alpha in T-cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 13 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3717 # text = The first product of ascorbate oxidation, the ascorbate free radical (AFR), acts in biological systems mainly as an oxidant, and through its role in the plasma membrane redox system exerts different effects on the cell. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 6 oxidation oxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 10 free free ADJ JJ Degree=Pos _ _ _ _ 11 radical radical ADJ JJ Degree=Pos _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 AFR AFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 biological biological ADJ JJ Degree=Pos _ _ _ _ 19 systems system NOUN NNS Number=Plur _ _ _ _ 20 mainly mainly ADV RB _ _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 oxidant oxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 plasma plasma NOUN NN Number=Sing _ _ _ _ 32 membrane membrane NOUN NN Number=Sing _ _ _ _ 33 redox redox NOUN NN Number=Sing _ _ _ _ 34 system system NOUN NN Number=Sing _ _ _ _ 35 exerts exert NOUN NNS Number=Plur _ _ _ _ 36 different different ADJ JJ Degree=Pos _ _ _ _ 37 effects effect NOUN NNS Number=Plur _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3718 # text = We have investigated the role of ascorbate, AFR and dehydroascorbate (DHA) in the activation of the NF-kappaB transcription factor in Jurkat T-cells stimulated by tumour necrosis factor-alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 AFR Afr NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 dehydroascorbate dehydroascorbate NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 DHA DHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 27 T- T- PUNCT , _ _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 tumour tumour NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3719 # text = Here we show, by electrophoretic mobility shift assays, that ascorbate increases the binding of NF-kappaB to DNA in TNF-alpha-stimulated Jurkat cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 7 mobility mobility NOUN NN Number=Sing _ _ _ _ 8 shift shift NOUN NN Number=Sing _ _ _ _ 9 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 13 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 DNA Dna PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3720 # text = The ability of ascorbate to enhance cytoplasmic inhibitory IkBalpha protein degradation correlates completely with its capacity to induce NF-kappaB binding to DNA and to potentiate NF-kappaB-mediated transactivation of the HIV-1 long terminal repeat promoter in TNF-alpha-stimulated Jurkat cells but not in cells stimulated with PMA plus ionomycin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 9 IkBalpha IkBalpha PROPN NNP Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 correlates correlate NOUN NNS Number=Plur _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 capacity capacity NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 DNA Dna NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 long long ADJ JJ Degree=Pos _ _ _ _ 40 terminal terminal NOUN NN Number=Sing _ _ _ _ 41 repeat repeat NOUN NN Number=Sing _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 but but CCONJ CC _ _ _ _ _ 52 not not PART RB _ _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ _ 55 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 with with ADP IN _ _ _ _ _ 57 PMA Pma PROPN NNP Number=Sing _ _ _ _ 58 plus plus CCONJ CC _ _ _ _ _ 59 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 3721 # text = AFR behaves like ascorbate, while DHA and ascorbate phosphate do not affect TNF-alpha-mediated NF-kappaB activation. 1 AFR Afr ADJ JJR Degree=Cmp _ _ _ _ 2 behaves behave NOUN NNS Number=Plur _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 DHA DHA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 10 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3722 # text = These results provide new evidence for a possible relationship between the activation of the electron-transport system at the plasma membrane by ascorbate or its free radical and redox-dependent gene transcription in T-cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 possible possible ADJ JJ Degree=Pos _ _ _ _ 9 relationship relationship NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 electron electron NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 transport transport NOUN NN Number=Sing _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 plasma plasma NOUN NN Number=Sing _ _ _ _ 22 membrane membrane NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 free free ADJ JJ Degree=Pos _ _ _ _ 28 radical radical ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 redox redox ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3723 # text = Document 003001258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001258 003001258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3724 # text = Cross-linking CD40 on B cells rapidly activates nuclear factor-kappa 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 linking link VERB VBG VerbForm=Ger _ _ _ _ 4 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 rapidly rapidly ADV RB _ _ _ _ _ 9 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -kappa -kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 3725 # text = B. 1 B b X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3726 # text = The B cell-associated surface molecule CD40 functions to regulate B cell responses. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B B NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 CD40 CD40 NUM CD NumType=Card _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3727 # text = Cross-linking CD40 on B cells can lead to homotypic cell adhesion, IL-6 production, and, in combination with cytokines, to Ig isotype switching. 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 linking link VERB VBG VerbForm=Ger _ _ _ _ 4 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 lead lead VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 homotypic homotypic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 combination combination NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 Ig ig VERB VB VerbForm=Inf _ _ _ _ 29 isotype isotype NOUN NN Number=Sing _ _ _ _ 30 switching switch VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3728 # text = Tyrosine kinase activity is increased shortly after engagement of this receptor. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 shortly shortly ADV RB _ _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 engagement engagement NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3729 # text = Little is known about how the very early events induced by CD40 cross-linking link to cellular responses. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 about about SCONJ IN _ _ _ _ _ 5 how how ADV WRB PronType=Int _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 13 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 15 link link NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3730 # text = In this study, we demonstrate that nuclear factor (NF)-kappa B and NF-kappa B-like transcription factors are activated after cross-linking CD40 on resting human tonsillar B cells and on B cell lines. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 like like ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 after after SCONJ IN _ _ _ _ _ 28 cross-linking cross-link VERB VBG VerbForm=Ger _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 30 on on SCONJ IN _ _ _ _ _ 31 resting rest VERB VBG VerbForm=Ger _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 tonsillar tonsillar NOUN NN Number=Sing _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3731 # text = The activation is rapid and is mediated through a tyrosine kinase-dependent pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3732 # text = The complexes detected in electrophoretic mobility shift assays contain p50, p65 (RelA), c-Rel, and most likely other components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 6 mobility mobility NOUN NN Number=Sing _ _ _ _ 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assays assay NOUN NNS Number=Plur _ _ _ _ 9 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 p65 p65 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 c- c- SYM NFP _ _ _ _ SpaceAfter=No 18 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 likely likely ADJ JJ Degree=Pos _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3733 # text = By using transient transfection assays, we found that cross-linking CD40 supports NF-kappa B-dependent gene expression. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 transient transient ADJ JJ Degree=Pos _ _ _ _ 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 12 CD40 CD40 NUM CD NumType=Card _ _ _ _ 13 supports support NOUN NNS Number=Plur _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3734 # text = Our results define the NF-kappa B system as an intermediate event in CD40 signaling and suggest that the CD40 pathway can influence the expression of B cell-associated genes with NF-kappa B consensus sites. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 13 event event NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD40 CD40 NUM CD NumType=Card _ _ _ _ 16 signaling signaling NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 influence influence VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 consensus consensus NOUN NN Number=Sing _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3735 # text = Document 003001259 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001259 003001259 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3736 # text = A negative regulatory region containing a glucocorticosteroid response element (nGRE) in the human interleukin-1beta gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 glucocorticosteroid glucocorticosteroid ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nGRE nGRE ADV RB PronType=Dem _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 gene. gene. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 3737 # text = Interleukin-1 beta (IL-1beta) is one of the most important inflammatory mediators in human inflammatory and immunological diseases. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 most most ADV RBS _ _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 mediators mediator NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 24 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3738 # text = The regulation of human IL-1beta gene expression has been studied for several years, and a few regulatory elements have been discovered in the promoter region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 few few ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 discovered discover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3739 # text = However, little is known about negative regulation of IL-1beta expression at the transcriptional level, which may play an important role in anti-inflammatory and immunosuppressive effects. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 30 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3740 # text = We have identified a negative regulatory element located in the region between -685 and -395. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 -685 -685 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 395 395 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3741 # text = Within this region, a 19-bp nuclear factor binding site (-570 to -552) was characterized by DNase I footprinting and electromobility shift assay. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 (-570 (-570 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 552 552 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 DNase DNase NOUN NN Number=Sing _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3742 # text = A consensus sequence for a negative glucocorticoid response element (nGRE) and a transcription activator protein-2 binding site were noted within this footprint. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 consensus consensus NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nGRE nGRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 binding binding NOUN NN Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 within within ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 footprint footprint NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3743 # text = Functional studies showed a 2.5-fold increase in promoter activity when this 19-bp binding site was deleted in the reporter constructs IL-1beta/CAT and IL-1beta/SV40 promoter/CAT. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fold fold NOUN NN Number=Sing _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 CAT cat NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 SV40 SV40 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 / / PUNCT , _ _ _ _ SpaceAfter=No 40 CAT. CAT. PROPN NNP Number=Sing _ _ _ _ # sent_id = 3744 # text = Dexamethasone (10(-8) M) repressed chloramphenicol acetyltransferase (CAT) production by 75% in the wild-type fragment but not in a deletion mutant lacking the 19-bp site. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 (- (- PUNCT . _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 M be NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 repressed repress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 fragment fragment NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 deletion deletion NOUN NN Number=Sing _ _ _ _ 30 mutant mutant NOUN NN Number=Sing _ _ _ _ 31 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 bp bp NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3745 # text = A protein of about 150 kD that bound to this negative regulatory sequence was identified by UV cross-linking. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 about about ADV RB _ _ _ _ _ 5 150 150 NUM CD NumType=Card _ _ _ _ 6 kD kD NOUN NN Number=Sing _ _ _ _ 7 that that ADV WRB PronType=Rel _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 UV UV PROPN NNP Number=Sing _ _ _ _ 18 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -linking -linking VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3746 # text = This is the first description of a negative regulatory region responsive to glucocorticoids in a cytokine gene. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 description description NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 negative negative ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3747 # text = Document 003001260 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001260 003001260 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3748 # text = Differences in transcriptional enhancers of HIV-1 and HIV-2. 1 Differences difference NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3749 # text = Response to T cell activation signals. 1 Response response NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3750 # text = T cell activation results in high levels of HIV replication and is thought to be one mechanism leading to the conversion from latent to active viral infection. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 conversion conversion NOUN NN Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 latent latent NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 active active ADJ JJ Degree=Pos _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3751 # text = In HIV-1, the sequences that respond to these signaling events are found in the long terminal repeat (LTR) and comprise the transcriptional enhancer, which contains two conserved binding sites for the nuclear factor kappa B (NF kappa 1 In in ADP IN _ _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 events event NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 long long ADJ JJ Degree=Pos _ _ _ _ 19 terminal terminal NOUN NN Number=Sing _ _ _ _ 20 repeat repeat NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 comprise comprise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 two two NUM CD NumType=Card _ _ _ _ 33 conserved conserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 NF NF PROPN NNP Number=Sing _ _ _ _ 44 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 3752 # text = B). 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 3753 # text = The corresponding region in the second AIDS retrovirus, HIV-2, contains a conserved and a divergent NF kappa B binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 AIDS aids NOUN NN Number=Sing _ _ _ _ 8 retrovirus retrovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3754 # text = We demonstrate that the HIV-1 LTR responds better than the HIV-2 LTR to T cell activation signals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 LTR Ltr NOUN NN Number=Sing _ _ _ _ 9 responds respond NOUN NNS Number=Plur _ _ _ _ 10 better better ADJ JJR Degree=Cmp _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 LTR Ltr NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3755 # text = These qualitative differences in the response to T cell activation are reproduced not only when HIV-1 or HIV-2 enhancers are placed upstream of a heterologous promoter but also when these enhancers are switched between their respective LTR. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 placed place VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 upstream upstream NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 when when ADV WRB PronType=Int _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 36 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 switched switch VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 between between ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 respective respective ADJ JJ Degree=Pos _ _ _ _ 41 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3756 # text = In electrophoretic mobility shift assays, NF kappa B binds to both conserved sites in the HIV-1 transcriptional enhancer and only to the single conserved site in the HIV-2 transcriptional enhancer. 1 In in ADP IN _ _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 single single ADJ JJ Degree=Pos _ _ _ _ 27 conserved conserve ADJ JJ Degree=Pos _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3757 # text = Instead of NF kappa B, the activator protein 3 binds to the divergent site in HIV-2. 1 Instead instead ADV RB _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 protein protein ADV WRB PronType=Rel _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 binds bind NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3758 # text = In conclusion, HIV-1 and HIV-2 are differentially regulated by T cell activation signals, and this difference may account for the longer period of viral latency observed with HIV-2 than with HIV-1 infection. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 differentially differentially ADV RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 difference difference NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 account account VERB VB VerbForm=Inf _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 longer longer ADJ JJ Degree=Pos _ _ _ _ 28 period period NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 latency latency NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 than than ADP IN _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3759 # text = Document 003001261 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001261 003001261 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3760 # text = Defining therapeutic targets by using adenovirus: 1 Defining defining VERB VBG VerbForm=Ger _ _ _ _ 2 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 3 targets target NOUN NNS Number=Plur _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ # sent_id = 3761 # text = blocking NF-kappaB inhibits both inflammatory and destructive mechanisms in rheumatoid synovium but spares anti-inflammatory mediators. 1 blocking block VERB VBG VerbForm=Ger _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 destructive destructive ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 13 synovium synovium NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 spares spare VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3762 # text = The role of the transcription factor NF-kappaB in the pathogenesis of rheumatoid arthritis has long been a subject of controversy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 15 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 long long ADV RB Degree=Pos _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 subject subject NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 controversy controversy NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3763 # text = We used an adenoviral technique of blocking NF-kappaB through overexpression of the inhibitory subunit IkappaBalpha, which has the advantage that it can be used in the diseased tissue itself, with >90% of the synovial macrophages, fibroblasts, and T cells infected. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 5 technique technique NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 advantage advantage NOUN NN Number=Sing _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 diseased diseased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 tissue tissue NOUN NN Number=Sing _ _ _ _ 32 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 > > SYM NFP _ _ _ _ SpaceAfter=No 36 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 % % SYM NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 41 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3764 # text = We found that the spontaneous production of tumor necrosis factor alpha and other pro-inflammatory cytokines is NF-kappaB-dependent in rheumatoid synovial tissue, in contrast to the main anti-inflammatory mediators, like IL-10 and -11, and the IL-1 receptor antagonist. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 24 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 25 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 contrast contrast NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 main main ADJ JJ Degree=Pos _ _ _ _ 32 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 33 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 like like ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 10 10 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 -11 -11 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 antagonist antagonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3765 # text = Of even more interest, IkappaBalpha overexpression inhibited the production of matrix metalloproteinases 1 and 3 while not affecting their tissue inhibitor. 1 Of of ADP IN _ _ _ _ _ 2 even even ADV RB _ _ _ _ _ 3 more more ADJ JJR Degree=Cmp _ _ _ _ 4 interest interest NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 matrix matrix NUM CD NumType=Card _ _ _ _ 13 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ _ 17 while while SCONJ IN _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 tissue tissue NOUN NN Number=Sing _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3766 # text = Blocking NF-kappaB in the rheumatoid joint thus has a very beneficial profile, reducing both the inflammatory response and the tissue destruction. 1 Blocking Blocke VERB VBG VerbForm=Ger _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 8 joint joint NOUN NN Number=Sing _ _ _ _ 9 thus thus ADV RB _ _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 very very ADV RB _ _ _ _ _ 13 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 14 profile profile NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 24 destruction destruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3767 # text = The adenoviral technique described here has widespread applicability, allowing rapid testing of the effects of blocking a potential therapeutic target in either cultures of normal cells or in the diseased tissue itself. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 3 technique technique NOUN NN Number=Sing _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 here here ADV RB PronType=Dem _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 8 applicability applicability NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 11 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 12 testing testing NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 blocking block VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 potential potential ADJ JJ Degree=Pos _ _ _ _ 20 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 21 target target NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 either either DET DT _ _ _ _ _ 24 cultures culture NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 diseased disease ADJ JJ Degree=Pos _ _ _ _ 32 tissue tissue NOUN NN Number=Sing _ _ _ _ 33 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3768 # text = Document 003001262 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001262 003001262 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3769 # text = The control of lytic replication of Epstein-Barr virus in B lymphocytes (Review). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 5 replication replication NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Review Review NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3770 # text = Uncontrolled replication of a virus, which is harmful to the host is also disadvantageous to the virus. 1 Uncontrolled Uncontroll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 replication replication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 harmful harmful ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 disadvantageous disadvantageous ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3771 # text = Most viruses cannot compete with the various immune mechanisms and become eliminated in the course of infection. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 viruses viruse NOUN NNS Number=Plur _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 4 not not PART RB _ _ _ _ _ 5 compete compete VERB VB VerbForm=Inf _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 become become VERB VB VerbForm=Inf _ _ _ _ 13 eliminated eliminated ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 course course NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3772 # text = Therefore, only the time between infection and eradication remains for these viruses to proliferate. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 eradication eradication NOUN NN Number=Sing _ _ _ _ 10 remains remain NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 viruses viruse NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 proliferate proliferate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3773 # text = A few viruses, like the Herpesviruses or the papillomaviruses, however, have developed a sophisticated strategy for persisting lifelong, usually asymptomatically in the host, hiding from the immune system and producing infectious progeny at the same time. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 few few ADJ JJ Degree=Pos _ _ _ _ 3 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 like like ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Herpesviruses Herpesviruse NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 papillomaviruses papillomaviruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 however however ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 sophisticated sophisticate ADJ JJ Degree=Pos _ _ _ _ 18 strategy strategy NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 persisting persist VERB VBG VerbForm=Ger _ _ _ _ 21 lifelong lifelong ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 usually usually ADV RB _ _ _ _ _ 24 asymptomatically asymptomatically ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 hiding hide VERB VBG VerbForm=Ger _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 immune immune ADJ JJ Degree=Pos _ _ _ _ 33 system system NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 producing produce VERB VBG VerbForm=Ger _ _ _ _ 36 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 37 progeny progeny NOUN NN Number=Sing _ _ _ _ 38 at at ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 same same ADJ JJ Degree=Pos _ _ _ _ 41 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3774 # text = This strategy depends on a separation of latency and the lytic replication, either by time due to differentiation-dependent mechanisms or by spatial separation as the result of different host cell types. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 strategy strategy NOUN NN Number=Sing _ _ _ _ 3 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 separation separation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 latency latency NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 spatial spatial ADJ JJ Degree=Pos _ _ _ _ 26 separation separation NOUN NN Number=Sing _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 result result NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 different different ADJ JJ Degree=Pos _ _ _ _ 32 host host NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3775 # text = Both are true for the Epstein-Barr virus (EBV). 1 Both both DET DT _ _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 true true ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3776 # text = B cells and epithelial cells have a pivotal role in the life cycle of the virus. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 life life NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3777 # text = The former can become latently infected and are thought to be the virus reservoir in vivo, whereas the latter were shown to be permissive for lytic replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 former former NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 become become VERB VB VerbForm=Inf _ _ _ _ 5 latently latently ADV RB _ _ _ _ _ 6 infected infect ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 latter latter ADJ JJ Degree=Pos _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3778 # text = However, replication of EBV in vivo is controlled primarily by host immune mechanisms selecting for cells that are not permissive for viral replication as the result of a particular set of transcription factors. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vivo vivo PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 primarily primarily ADV RB _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 selecting selecte VERB VBG VerbForm=Ger _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 replication replication NOUN NN Number=Sing _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 result result NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 particular particular ADJ JJ Degree=Pos _ _ _ _ 31 set set NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3779 # text = These factors control the activity of the regulatory immediate-early genes and, in addition, lytic and latent cycle regulatory genes negatively interfere with each other and thus link cellular and viral gene regulatory mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 latent latent ADJ JJ Degree=Pos _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 negatively negatively ADV RB _ _ _ _ _ 25 interfere interfere ADV RB PronType=Dem _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 thus thus ADV RB _ _ _ _ _ 31 link link NOUN NN Number=Sing _ _ _ _ 32 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3780 # text = Disturbance of both the immune surveillance as well as viral gene regulation may result in EBV-associated disease. 1 Disturbance Disturbance NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 immune immune ADJ JJ Degree=Pos _ _ _ _ 6 surveillance surveillance NOUN NN Number=Sing _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3781 # text = Document 003001263 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001263 003001263 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3782 # text = Identification of a region which directs the monocytic activity of the colony-stimulating factor 1 (macrophage colony-stimulating factor) receptor promoter and binds PEBP2/CBF (AML1). 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 binds bind NOUN NNS Number=Plur _ _ _ _ 28 PEBP2/ PEBP2/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 29 CBF CBF PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3783 # text = The receptor for the macrophage colony-stimulating factor (or colony-stimulating factor 1 [CSF-1]) is expressed from different promoters in monocytic cells and placental trophoblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 or or CCONJ CC _ _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 placental placental ADJ JJ Degree=Pos _ _ _ _ 33 trophoblasts trophoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3784 # text = We have demonstrated that the monocyte-specific expression of the CSF-1 receptor is regulated at the level of transcription by a tissue-specific promoter whose activity is stimulated by the monocyte/B-cell-specific transcription factor PU.1 (D.-E.Zhang, C.J.Hetherington, H.-M.Chen, and D.G.Tenen, Mol.Cell. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 monocyte/B-cell monocyte/B-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 D. D. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 E.Zhang E.Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 C.J.Hetherington C.J.Hetherington PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 H.-M. H.-M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 Chen Chen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 D.G.Tenen D.G.Tenen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 Mol.Cell Mol.Cell PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3785 # text = Biol.14:373-381, 1994). 1 Biol.14:373-381 Biol.14:373-381 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1994 1994 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 3786 # text = Here we report that the tissue specificity of this promoter is also mediated by sequences in a region II (bp -88 to - 59), which lies 10 bp upstream from the PU.1-binding site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tissue tissue NOUN NN Number=Sing _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 88 88 NUM CD NumType=Card _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 - - SYM SYM _ _ _ _ _ 26 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 10 10 NUM CD NumType=Card _ _ _ _ 32 bp bp NOUN NN Number=Sing _ _ _ _ 33 upstream upstream NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3787 # text = When analyzed by DNase footprinting, region II was protected preferentially in monocytic cells. 1 When when ADV WRB PronType=Int _ _ _ _ 2 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 DNase DNase NOUN NN Number=Sing _ _ _ _ 5 footprinting footprinting NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 II ii PRON PRP _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 protected protect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 preferentially preferentially ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3788 # text = Electrophoretic mobility shift assays confirmed that region II interacts specifically with nuclear proteins from monocytic cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 interacts interact NOUN NNS Number=Plur _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3789 # text = Two gel shift complexes (Mono A and Mono B) were formed with separate sequence elements within this region. 1 Two two NUM CD NumType=Card _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 complexes complex NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Mono Mono PROPN NNP Number=Sing _ _ _ _ 7 A A PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Mono Mono PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 separate separate ADJ JJ Degree=Pos _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3790 # text = Competition and supershift experiments indicate that Mono B contains a member of the polyomavirus enhancer-binding protein 2/core-binding factor (PEBP2/CBF) family, which includes the AML1 gene product, while Mono A is a distinct complex preferentially expressed in monocytic cells. 1 Competition competition NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Mono Mono PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PEBP2/ PEBP2ith NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 CBF CBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 while while SCONJ IN _ _ _ _ _ 39 Mo mo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 no no DET DT _ _ _ _ _ 41 A a NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ _ 46 preferentially preferentially ADV RB _ _ _ _ _ 47 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3791 # text = Promoter constructs with mutations in these sequence elements were no longer expressed specifically in monocytes. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 no no ADV RB _ _ _ _ _ 11 longer longer ADV RBR Degree=Cmp _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3792 # text = Furthermore, multimerized region II sequence elements enhanced the activity of a heterologous thymidine kinase promoter in monocytic cells but not other cell types tested. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 14 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 types type NOUN NNS Number=Plur _ _ _ _ 25 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3793 # text = These results indicate that the monocyte/B-cell-specific transcription factor PU.1 and the Mono A and Mono B protein complexes act in concert to regulate monocyte-specific transcription of the CSF-1 receptor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocyte/B-cell monocyte/B-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Mono Mono PROPN NNP Number=Sing _ _ _ _ 15 A a PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Mono Mono PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 complexes complex NOUN NNS Number=Plur _ _ _ _ 21 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 concert concert NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3794 # text = Document 003001264 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001264 003001264 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3795 # text = Transcriptional repression of the interleukin-2 gene by vitamin D3: direct inhibition of NFATp/AP-1 complex formation by a nuclear hormone receptor. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 repression repression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 11 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 direct direct ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 formation formation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 hormone hormone NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3796 # text = T-lymphocyte proliferation is suppressed by 1,25-dihydroxyvitamin D3 [1,25(OH)2D3], the active metabolite of vitamin D3, and is associated with a decrease in interleukin 2 (IL-2), gamma interferon, and granulocyte-macrophage colony-stimulating factor mRNA levels. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 3 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 10 D3 D3 NOUN NN Number=Sing _ _ _ _ 11 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 24 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 decrease decrease NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 gamma gamma NOUN NN Number=Sing _ _ _ _ 42 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 48 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ _ 52 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 53 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3797 # text = We report here that 1,25(OH)2D3-mediated repression in Jurkat cells is cycloheximide resistant, suggesting that it is a direct transcriptional repressive effect on IL-2 expression by the vitamin D3 receptor (VDR). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 repression repression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 18 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 direct direct ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 37 D3 D3 NOUN NN Number=Sing _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3798 # text = We therefore examined vitamin D3-mediated repression of activated IL-2 expression by cotransfecting Jurkat cells with IL-2 promoter/reporter constructs and a VDR overexpression vector and by DNA binding. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 5 D3 D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 repression repression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 cotransfecting cotransfect VERB VBG VerbForm=Ger _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 constructs construct NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 VDR VDR ADJ JJR Degree=Cmp _ _ _ _ 30 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 31 vector vector NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 by by SCONJ IN _ _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3799 # text = We delineated an element conferring both DNA binding by the receptor in vitro and 1,25(OH)2D3-mediated repression in vivo to a short 40-bp region encompassing an important positive regulatory element, NF-AT-1, which is bound by a T-cell-specific transcription factor, NFATp, as well as by AP-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 delineated delineate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 repression repression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 short short ADJ JJ Degree=Pos _ _ _ _ 28 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 bp bp NOUN NN Number=Sing _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 positive positive ADJ JJ Degree=Pos _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 bound bound ADJ JJ Degree=Pos _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 specific specific ADJ JJ Degree=Pos _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 as as ADV RB _ _ _ _ _ 60 well well ADV RB Degree=Pos _ _ _ _ 61 as as ADP IN _ _ _ _ _ 62 by by ADP IN _ _ _ _ _ 63 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 3800 # text = VDR DNA-binding mutants were unable to either bind to this element in vitro or repress in vivo; the VDR DNA-binding domain alone, however, bound the element but also could not repress IL-2 expression. 1 VDR VDR VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 unable unable ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 bind bind ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 repress repress NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 VDR VDR PROPN NNP Number=Sing _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ _ 27 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 however however ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 bound bound ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 could could AUX MD VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 repress repress VERB VB VerbForm=Inf _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3801 # text = These results indicate that DNA binding by VDR is necessary but not sufficient to mediate IL-2 repression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DNA Dna PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 VDR VDR PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3802 # text = By combining partially purified proteins in vitro, we observed the loss of the bound NFATp/AP-1-DNA complex upon inclusion of VDR or VDR-retinoid X receptor. 1 By by SCONJ IN _ _ _ _ _ 2 combining combi VERB VBG VerbForm=Ger _ _ _ _ 3 partially partially ADV RB _ _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 loss loss NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 NFATp NFATp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 inclusion inclusion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 VDR VDR PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 32 X x NOUN NN Number=Sing _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3803 # text = Order of addition and off-rate experiments indicate that the VDR-retinoid X receptor heterodimer blocks NFATp/AP-1 complex formation and then stably associates with the NF-AT-1 element. 1 Order order ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 off off NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 VDR Vdr NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 15 X x ADP IN _ _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 18 blocks block NOUN NNS Number=Plur _ _ _ _ 19 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 formation formation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 then then ADV RB PronType=Dem _ _ _ _ 28 stably stably ADV RB _ _ _ _ _ 29 associates associate VERB NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 AT at NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3804 # text = This direct inhibition by a nuclear hormone receptor of transcriptional activators of the IL-2 gene may provide a mechanistic explanation of how vitamin derivatives can act as potent immunosuppressive agents. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activators activator NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 provide provide VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 mechanistic mechanistic ADJ JJ Degree=Pos _ _ _ _ 22 explanation explanation NOUN NN Number=Sing _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 how how ADV WRB PronType=Int _ _ _ _ 25 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 26 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 act act VERB VB VerbForm=Inf _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 potent potent ADJ JJ Degree=Pos _ _ _ _ 31 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 32 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3805 # text = Document 003001265 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001265 003001265 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3806 # text = Reactive oxygen intermediates as apparently widely used messengers in the activation of the NF-kappa B transcription factor and HIV-1. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 3 intermediates intermediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 apparently apparently ADV RB _ _ _ _ _ 6 widely widely ADV RB _ _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 messengers messenger NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3807 # text = Hydrogen peroxide and oxygen radicals are agents commonly produced during inflammatory processes. 1 Hydrogen Hydrogen ADJ JJ Degree=Pos _ _ _ _ 2 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 5 radicals radical NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 agents agent NOUN NNS Number=Plur _ _ _ _ 8 commonly commonly ADV RB _ _ _ _ _ 9 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3808 # text = In this study, we show that micromolar concentrations of H2O2 can induce the expression and replication of HIV-1 in a human T cell line. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 H2O2 h2o2 NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T t NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3809 # text = The effect is mediated by the NF-kappa B transcription factor which is potently and rapidly activated by an H2O2 treatment of cells from its inactive cytoplasmic form. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 potently potently ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 28 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 29 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3810 # text = N-acetyl-L-cysteine (NAC), a well characterized antioxidant which counteracts the effects of reactive oxygen intermediates (ROI) in living cells, prevented the activation of NF-kappa B by H2O2. 1 N-acetyl N-acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -L- -L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 well well ADV RB Degree=Pos _ _ _ _ 10 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 counteracts counteract VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 18 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 19 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ROI Roi X AFX _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 living living ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3811 # text = NAC and other thiol compounds also blocked the activation of NF-kappa B by cycloheximide, double-stranded RNA, calcium ionophore, TNF-alpha, active phorbol ester, interleukin-1, lipopolysaccharide and lectin. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 thiol thiol NOUN NN Number=Sing _ _ _ _ 5 compounds compound NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ _ 24 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 active active ADJ JJ Degree=Pos _ _ _ _ 31 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 32 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3812 # text = This suggests that diverse agents thought to activate NF-kappa B by distinct intracellular pathways might all act through a common mechanism involving the synthesis of ROI. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 5 agents agent NOUN NNS Number=Plur _ _ _ _ 6 thought think VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 all all ADV RB _ _ _ _ _ 19 act act VERB VB VerbForm=Inf _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 involving involve VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3813 # text = ROI appear to serve as messengers mediating directly or indirectly the release of the inhibitory subunit I kappa B from NF-kappa B. 1 ROI ROI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 serve serve VERB VB VerbForm=Inf _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 messengers messenger NOUN NNS Number=Plur _ _ _ _ 7 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 indirectly indirectly ADV RB _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3814 # text = Document 003001266 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001266 003001266 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3815 # text = Processing of the precursor of NF-kappa B by the HIV-1 protease during acute infection. 1 Processing processing NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 precursor precursor NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 protease protease NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3816 # text = Transcription of the human immunodeficiency virus type-1 (HIV-1) genome is regulated in part by cellular factors and is stimulated by activation of latently infected T cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 genome genome NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 part part NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 latently latently ADV RB _ _ _ _ _ 30 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3817 # text = T-cell activation also correlates with the induction of the factor NF-kappa B which binds to two adjacent sites in the HIV-1 long terminal repeat. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3818 # text = This factor consists of two DNA-binding subunits of relative molecular mass 50,000 (50K) associated with two 65K subunits. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 subunits subunit NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 relative relative ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mass mass NOUN NN Number=Sing _ _ _ _ 14 50,000 50,000 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 K k NUM CD NumType=Card _ _ _ _ 24 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3819 # text = It is located in the nucleus in mature B cells, but is present in other cell types as an inactive cytoplasmic complex. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 mature mature ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3820 # text = External stimuli, including those that activate T cells, result in nuclear translocation of active NF-kappa B. 1 External external ADJ JJ Degree=Pos _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 including include VERB VBG VerbForm=Ger _ _ _ _ 5 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 activate activate ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 result result NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3821 # text = The cloning of the complementary DNA for the 50K subunit helped to identify an exclusively cytoplasmic 105K precursor (p105) (V.B., P.K. and A.I., manuscript submitted). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 K k NUM CD NumType=Card _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 helped help VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 identify identify VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 exclusively exclusively ADV RB _ _ _ _ _ 17 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 18 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 K k NUM CD NumType=Card _ _ _ _ 20 precursor precursor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 V.B. V.B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 P.K. P.K. PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 A.I. A.I. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 manuscript manuscript NOUN NN Number=Sing _ _ _ _ 32 submitted submit VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3822 # text = The expression of active NF-kappa B might therefore also be regulated by the extent of processing of p105. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 might might AUX MD VerbForm=Fin _ _ _ _ 10 therefore therefore ADV RB _ _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 extent extent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 processing processing NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3823 # text = Because HIV-1 requires active NF-kappa B for efficient transcription, we tested the effect of HIV-1 infection on the processing of the human 105K precursor. 1 Because because SCONJ IN _ _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 processing processing NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 K k NUM CD NumType=Card _ _ _ _ 32 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3824 # text = We show here that the HIV-1 protease can process p105 and increases levels of active nuclear NF-kappa B complex. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 protease protease NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 process process VERB VB VerbForm=Inf _ _ _ _ 12 p105 p105 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 active active ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3825 # text = Document 003001267 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001267 003001267 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3826 # text = Differential RNA display identifies novel genes associated with decreased vitamin D receptor expression. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 RNA RNa NOUN NN Number=Sing _ _ _ _ 3 display display NOUN NN Number=Sing _ _ _ _ 4 identifies identify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 novel novel ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 11 D d NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3827 # text = To characterize further the function of the intracellular vitamin D receptor (VDR), we have developed stable transfectant variants of a vitamin D-responsive cell line (U937) which express either decreased or increased numbers of VDR. 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 further further ADV RBR Degree=Cmp _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 9 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 10 D d NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 stable stable ADJ JJ Degree=Pos _ _ _ _ 20 transfectant transfectant ADJ JJ Degree=Pos _ _ _ _ 21 variants variant NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 25 D- D- PUNCT , _ _ _ _ SpaceAfter=No 26 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 express express ADJ JJ Degree=Pos _ _ _ _ 34 either either CCONJ CC _ _ _ _ _ 35 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 numbers number NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3828 # text = In this study we have analyzed changes in gene expression associated with this variable VDR expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 gene gene ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 variable variable ADJ JJ Degree=Pos _ _ _ _ 15 VDR Vdr NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3829 # text = Initial experiments indicated that a 50% decrease in VDR levels was associated with a 2-fold increase in cell proliferation and a similar rise in c-myc mRNA expression. 1 Initial initial ADJ JJ Degree=Pos _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 VDR Vdr ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fold fold NOUN NN Number=Sing _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 rise rise NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 c- c- SYM NFP _ _ _ _ SpaceAfter=No 29 myc myc NOUN NN Number=Sing _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3830 # text = Further studies were carried out using differential RNA display (DD). 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 out out ADP RP _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 differential differential ADJ JJ Degree=Pos _ _ _ _ 8 RNA RNa NOUN NN Number=Sing _ _ _ _ 9 display display NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 DD D NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3831 # text = Sequence analysis of DD products revealed two cDNAs with identity to known gene products: the catalytic sub-unit of DNA-protein kinase (DNA-PK(CS)), and the peroxisomal enzyme 17beta-hydroxysteroid dehydrogenase type IV (17beta-HSD IV). 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DD DD PROPN NNP Number=Sing _ _ _ _ 5 products product NOUN NNS Number=Plur _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 identity identity NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 18 sub-unit sub-unit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 PK PK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CS CS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 peroxisomal peroxisomal ADJ JJ Degree=Pos _ _ _ _ 36 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 37 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 hydroxysteroid hydroxysteroid NOUN NN Number=Sing _ _ _ _ 40 dehydrogenase dehydrogenase NOUN NN Number=Sing _ _ _ _ 41 type type NOUN NN Number=Sing _ _ _ _ 42 IV iv PROPN NNP Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 17beta 17beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 HSD Hsd PROPN NNP Number=Sing _ _ _ _ 47 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3832 # text = Northern analysis confirmed that expression of both mRNAs was reduced in cells with decreased numbers of VDR. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 numbers number NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3833 # text = Down-regulation of 17beta-HSD IV mRNA expression was associated with enhanced estradiol inactivation by U937 cells, suggesting a link between estrogenic pathways and cell proliferation. 1 Down down ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 HSD Hsd NOUN NN Number=Sing _ _ _ _ 8 IV iv NOUN NN Number=Sing _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 estradiol estradiol NOUN NN Number=Sing _ _ _ _ 16 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 link link NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 estrogenic estrogenic ADJ JJ Degree=Pos _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3834 # text = Further Northern analyses indicated that there was no significant change in 17beta-HSD IV or DNA-PK(CS) mRNA levels following treatment with 1,25(OH)2D3, although expression of both genes varied with changes in cell proliferation. 1 Further further ADV RB _ _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 there there PRON EX _ _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 change change NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 HSD Hsd NOUN NN Number=Sing _ _ _ _ 15 IV iv NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 PK Pk NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CS CS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 although although SCONJ IN _ _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 both both DET DT _ _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 varied varied VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 changes change NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3835 # text = These data suggest that, in addition to its established role as a hormone-dependent trans-activator, VDR may influence gene expression by ligand-independent mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 VDR VDR PROPN NNP Number=Sing _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 influence influence VERB VB VerbForm=Inf _ _ _ _ 24 gene gene ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 independent independent ADJ JJ Degree=Pos _ _ _ _ 30 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3836 # text = Document 003001268 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001268 003001268 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3837 # text = Mapping of the transcriptional repression domain of the lymphoid-specific transcription factor oct-2A. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 repression repression NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 oct oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3838 # text = The lymphoid-specific transcription factor Oct-2a is implicated in B cell-specific transcriptional activity via the octamer motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 octamer octamer NOUN NN Number=Sing _ _ _ _ 23 motif. motif. NOUN NN Number=Sing _ _ _ _ # sent_id = 3839 # text = Structure/function analysis of various Oct-2a effector regions in the context of the GAL4 DNA-binding domain revealed that Oct-2a contains two functionally different activation domains at the N and the C termini. 1 Structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 effector effector NOUN NN Number=Sing _ _ _ _ 12 regions region NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 context context NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 contains contain NOUN NN Number=Sing _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 functionally functionally ADV RB _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 domains domain NOUN NNS Number=Plur _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 N N PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 C C NOUN NN Number=Sing _ _ _ _ 41 termini termini NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3840 # text = The transcriptional activity of both domains is strongly potentiated by interactions with distinct B cell-specific coactivators. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 domains domains NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 strongly strongly ADV RB _ _ _ _ _ 9 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 coactivators coactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3841 # text = Recently, we have identified a repression domain located within the N terminus of Oct-2a (amino acids 2-99). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 repression repression NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 N N PROPN NNP Number=Sing _ _ _ _ 13 terminus terminus NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 amino amino NOUN NN Number=Sing _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 99 99 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3842 # text = When this domain was transferred to a potent activator, transcription was strongly inhibited. 1 When when ADV WRB PronType=Int _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 transferred transfer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potent potent NOUN NN Number=Sing _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3843 # text = In this study we present a deletion analysis of the N-terminal region of Oct-2a to determine the minimal repression domain. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 deletion deletion NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 terminal terminal NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2a 2a NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 determine determine VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 repression repression NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3844 # text = We identified a stretch of 23 amino acids, rich in serine and threonine residues, which was responsible for most of the repression activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 stretch stretch NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 23 23 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 rich rich ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 serine serine NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 threonine threonine NUM CD NumType=Card _ _ _ _ 15 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 repression repression NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3845 # text = We show that repression is strongly dependent on the type of enhancer present in the reporter plasmid as well as on the cell line tested. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 strongly strongly ADV RB _ _ _ _ _ 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3846 # text = The possibility that Oct-2a can act as an activator and/or a repressor may have important consequences for the function of Oct-2a in B cell differentiation and other developmental processes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 possibility possibility NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 a a NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 act act VERB VB VerbForm=Inf _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 or or CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 have have VERB VB VerbForm=Inf _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 consequences consequence NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 other other ADJ JJ Degree=Pos _ _ _ _ 36 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 37 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3847 # text = Document 003001269 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001269 003001269 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3848 # text = Regulation of cell-type-specific interleukin-2 receptor alpha-chain gene expression: potential role of physical interactions between Elf-1, HMG-I(Y), and NF-kappa B family proteins. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 type- type- PUNCT : _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 potential potential ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 physical physical ADJ JJ Degree=Pos _ _ _ _ 21 interactions interaction NOUN NNS Number=Plur _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 kappa kappa X FW Foreign=Yes _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 family family NOUN NN Number=Sing _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3849 # text = The interleukin 2 receptor alpha-chain (IL-2R alpha) gene is rapidly and potently induced in T cells in response to mitogenic stimuli. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 potently potently ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3850 # text = Previously, an inducible enhancer between nucleotides -299 and -228 that contains NF-kappa B and CArG motifs was identified. 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 299 299 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 228 228 NUM CD NumType=Card _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 CArG Carg NOUN NN Number=Sing _ _ _ _ 21 motifs motif NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3851 # text = We now report the characterization of a second essential positive regulatory element located between nucleotides -137 and -64 that binds Elf-1 and HMG-I(Y). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 essential essential NOUN NN Number=Sing _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 137 137 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 64 64 NUM CD NumType=Card _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3852 # text = This element had maximal activity in lymphoid cells, paralleling the cell type specificity of Elf-1 expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 paralleling parallel VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 specificity specificity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3853 # text = Transcription from the IL-2R alpha promoter was inhibited when either the Elf-1 or the HMG-I(Y) binding site was mutated. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2R 2R PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3854 # text = Coexpression of both proteins activated transcription of the -137 to -64 element in COS-7 cells. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 137 137 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 64 64 NUM CD NumType=Card _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 7 7 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3855 # text = Elf-1 physically associated with HMG-I and with NF-kappa B p50 and c-Rel in vitro, suggesting that protein-protein interactions might functionally coordinate the actions of the upstream and downstream positive regulatory elements. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 physically physically ADV RB _ _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 p50 p50 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Rel Rel NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 interactions interaction NOUN NNS Number=Plur _ _ _ _ 29 might might AUX MD VerbForm=Fin _ _ _ _ 30 functionally functionally ADV RB _ _ _ _ _ 31 coordinate coordinate VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 actions action NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 39 positive positive ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3856 # text = This is the first report of a physical interaction between an Ets family member and NF-kappa B family proteins. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 physical physical ADJ JJ Degree=Pos _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3857 # text = These findings provide significant new insights into the protein-protein and protein-DNA interactions that regulate cell-type-specific and inducible IL-2R alpha gene expression and also have implications for other genes regulated by Elf-1 and NF-kappa B family proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 insights insight NOUN NNS Number=Plur _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 interactions interaction NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -type-specific -type-specific ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 X LS _ _ _ _ SpaceAfter=No 25 R r X GW _ _ _ _ _ 26 alpha alpha X GW _ _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 implications implication NOUN NNS Number=Plur _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 family family NOUN NN Number=Sing _ _ _ _ 47 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3858 # text = Document 003001270 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001270 003001270 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3859 # text = LMP-1 activates NF-kappa B by targeting the inhibitory molecule I kappa B alpha. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 targeting target VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ _ 17 alpha. alpha. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 3860 # text = LMP-1, an Epstein-Barr virus membrane protein expressed during latent infection, has oncogenic properties, as judged from its ability to transform B lymphocytes and rodent fibroblasts. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 latent latent ADJ JJ Degree=Pos _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 19 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 judged judged VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 transform transform VERB VB VerbForm=Inf _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 rodent rodent ADJ JJ Degree=Pos _ _ _ _ 32 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3861 # text = LMP-1 induces the expression of bcl2, an oncogene which protects cells from apoptosis, as well as of genes encoding other proteins involved in cell regulation and growth control. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 bcl2 bcl2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3862 # text = The mechanisms by which LMP-1 upregulates these proteins is unknown, but it is plausible that LMP-1 modifies signal transduction pathways that result in the activation of one or more transcription factors that ultimately regulate transcription of oncogenic genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 upregulates upregulate NOUN NNS Number=Plur _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 plausible plausible ADJ JJ Degree=Pos _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 modifies modify NOUN NNS Number=Plur _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ _ 25 pathways pathway NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 result result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 one one NUM CD NumType=Card _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 more more ADJ JJR Degree=Cmp _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 ultimately ultimately ADV RB _ _ _ _ _ 39 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 43 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3863 # text = NF-kappa B, a transcription factor controlling the expression of genes involved in cell activation and growth control, has been shown to be activated by LMP-1. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3864 # text = The mechanism(s) regulating this activation remains unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3865 # text = Our data indicate that increased NF-kappa B DNA binding and functional activity are present in B-lymphoid cells stably or transiently expressing LMP-1. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 present present ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 stably stably ADV RB _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 transiently transiently ADV RB _ _ _ _ _ 25 expressing express VERB VBG VerbForm=Ger _ _ _ _ 26 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3866 # text = I kappa B alpha is selectively modified in LMP-1-expressing B cells. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 selectively selectively ADV RB _ _ _ _ _ 7 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3867 # text = A phosphorylated form of I kappa B alpha and increased protein turnover-degradation correlate with increased NF-kappa B nuclear translocation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 degradation degradation NOUN NN Number=Sing _ _ _ _ 15 correlate correlate NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3868 # text = This results in increased transcription of NF-kappa B-dependent-genes, including those encoding p105 and I kappa B alpha (MAD3). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 19 p105 p105 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B B PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MAD3 MAD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3869 # text = These results indicate that LMP-1 activates NF-kappa B in B-cell lines by targeting I kappa B alpha. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activates activate NOUN NNS Number=Plur _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 targeting targete VERB VBG VerbForm=Ger _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3870 # text = Identification of the pathways activated by LMP-1 to result in posttranslational modifications of I kappa B alpha will aid in determining the role of this virus-host cell protein interaction in Epstein-Barr virus-mediated oncogenesis. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 result result VERB VB VerbForm=Inf _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 14 modifications modification NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 will will AUX MD VerbForm=Fin _ _ _ _ 21 aid aid VERB VB VerbForm=Inf _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 determining determine VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 host host NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 interaction interaction NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Barr Barr PROPN NNP Number=Sing _ _ _ _ 38 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 oncogenesis oncogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3871 # text = Document 003001271 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001271 003001271 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3872 # text = Granulocyte colony-stimulating factor activates a 72-kDa isoform of STAT3 in human neutrophils. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ _ 2 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -stimulating -stimulat ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kDa kDa NOUN NN Number=Sing _ _ _ _ 10 isoform isoform NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3873 # text = Granulocyte colony-stimulating factor (G-CSF) signaling involves activation of STATs, proteins that serve the dual function of signal transduction and activation of transcription. 1 Granulocyte Granulocyte PROPN NNP Number=Sing _ _ _ _ 2 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 11 involves involve NOUN NNS Number=Plur _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STATs STAT NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 dual dual ADJ JJ Degree=Pos _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3874 # text = We previously demonstrated that G-CSF activated a distinct Stat3-like protein in immature and mature normal myeloid cells, StatG. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 G- G- SYM NFP _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 immature immature ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 StatG StatG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3875 # text = StatG in normal immature human myeloid cells, i.e. adult CD34+ bone marrow cells, was composed of Stat3beta. 1 StatG Statg PRON NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 immature immature ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 i.e. i.e. X FW _ _ _ _ _ 10 adult adult ADJ JJ Degree=Pos _ _ _ _ 11 CD34 CD34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 bone bone NOUN NN Number=Sing _ _ _ _ 14 marrow marrow NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3876 # text = This investigation was undertaken to determine the composition of StatG in mature normal human myeloid cells, i.e. polymorphonuclear neutrophilic granulocytes (PMN). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 investigation investigation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 composition composition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 StatG Statg PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 mature mature ADJ JJ Degree=Pos _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 i.e. i.e. X FW _ _ _ _ _ 19 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 20 neutrophilic neutrophilic ADJ JJ Degree=Pos _ _ _ _ 21 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 PMN Pmn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3877 # text = These studies revealed that the major protein in extracts of PMN activated by G-CSF to bind the high-affinity serum-inducible element (hSIE) is a 72-kDa protein that cross-reacts with Stat3 monoclonal antibody, which we have designated Stat3gamma. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PMN PMN PROPN NNP Number=Sing _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 CSF CSF PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 bind bind VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 affinity affinity NOUN NN Number=Sing _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 element element NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 hSIE hsie NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kDa kDa NOUN NN Number=Sing _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 cross-reacts cross-react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 39 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 40 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 44 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3878 # text = Stat3gamma is derived from Stat3alpha by limited proteolysis and lacks the carboxyl-terminal portion of Stat3alpha. 1 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 limited limited ADJ JJ Degree=Pos _ _ _ _ 10 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 17 portion portion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3879 # text = Because this region of Stat3alpha is involved in transcriptional activation, our findings suggest the possibility that Stat3gamma may be transcriptionally inactive and may compete with Stat3alpha for Stat3 binding sites in these terminally differentiated myeloid cells. 1 Because because SCONJ IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 14 findings finding NOUN NNS Number=Plur _ _ _ _ 15 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 possibility possibility NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 transcriptionally transcriptionally ADV RB _ _ _ _ _ 24 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 compete compete VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 terminally terminally ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3880 # text = Document 003001272 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001272 003001272 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3881 # text = NF-kappa B-independent suppression of HIV expression by ascorbic acid. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ascorbic ascorbic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3882 # text = Ascorbic acid (ascorbate or vitamin C) has been shown to suppress the induction of HIV in latently infected T lymphocytic cells following stimulation with a tumor promoter (PMA) and inflammatory cytokine (TNF-alpha). 1 Ascorbic Ascorbic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 latently latently ADV RB _ _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 35 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3883 # text = To assess whether this inhibition was mediated via modulation of the cellular transcription factor, NF-kappa B, we carried out gel shift analysis on nuclear extracts prepared under different conditions of cell stimulation in the presence or absence of ascorbate, N-acetylcysteine (NAC), or zidovudine (AZT). 1 To to PART TO _ _ _ _ _ 2 assess assess VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 modulation modulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 out out ADP RP _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 analysis analysis NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 extracts extract NOUN NNS Number=Plur _ _ _ _ 30 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 under under ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 conditions condition NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 absence absence NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 or or CCONJ CC _ _ _ _ _ 52 zidovudine zidovudine NOUN NN Number=Sing _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 AZT AZT NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3884 # text = Pretreatment of ACH-2 T cells by NAC followed by stimulation with PMA, TNF-alpha, or hydrogen peroxide (H2O2) resulted in strong suppression of NF-kappa B activation. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ACH ACH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NAC NAC PROPN NNP Number=Sing _ _ _ _ 10 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 hydrogen hydrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 strong strong ADJ JJ Degree=Pos _ _ _ _ 30 suppression suppression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3885 # text = In contrast, neither ascorbate nor AZT affected NF-kappa B activity under all three induction conditions in the ACH-2 cell line. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 neither neither CCONJ CC _ _ _ _ _ 5 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 6 nor nor CCONJ CC _ _ _ _ _ 7 AZT Azt ADV RB _ _ _ _ _ 8 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 under under ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 conditions condition NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3886 # text = Ascorbate and AZT also had no effect on NF-kappa B activation following TNF-alpha- or PMA-induced stimulation of U1 promonocytic cells. 1 Ascorbate Ascorbate PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 AZT AZT PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 U1 U1 NUM CD NumType=Card _ _ _ _ 26 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3887 # text = These results suggest that the molecular mechanism of HIV inhibition by ascorbate is not mediated via NF-kappa B inhibition, unlike that seen with other antioxidants. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 unlike unlike ADP IN _ _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 seen see NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3888 # text = Document 003001273 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001273 003001273 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3889 # text = Paradoxical priming effects of IL-10 on cytokine production. 1 Paradoxical Paradoxical ADJ JJ Degree=Pos _ _ _ _ 2 priming priming VERB VBG VerbForm=Ger _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3890 # text = IL-10 is a well-known immunosuppressive and/or anti-inflammatory cytokine. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 or or CCONJ CC _ _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3891 # text = However, we report in vitro experimental studies in which IL-10 primed leukocytes and led to an enhanced production of tumor necrosis factor (TNF) upon further stimulation by lipopolysaccharide (LPS). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro NUM CD NumType=Card _ _ _ _ 7 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 primed prim ADJ JJ Degree=Pos _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 upon upon ADP IN _ _ _ _ _ 30 further further ADJ JJ Degree=Pos _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3892 # text = Monocytes and peripheral blood mononuclear cells (PBMC) prepared from whole blood maintained for 20 1 Monocytes Monocyte PROPN NNPS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 prepared prepare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 whole whole ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 maintained maintain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 20 20 NUM CD NumType=Card _ _ _ _ # sent_id = 3893 # text = h at 37 degrees C in the presence of recombinant human IL-10 had an enhanced capacity to produce TNF in response to LPS. 1 h h INTJ UH _ _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 37 37 NUM CD NumType=Card _ _ _ _ 4 degrees degree NOUN NNS Number=Plur _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 capacity capacity NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 produce produce VERB VB VerbForm=Inf _ _ _ _ 21 TNF TNF NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3894 # text = In addition to TNF, LPS-induced IL-6 and spontaneous IL-1ra production were also enhanced. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ra ra NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3895 # text = When isolated PBMC were first cultured for 20 h in the presence of IL-10 on Teflon to prevent adherence, washed to remove IL-10 and then further cultured in plastic dishes for an additional 20 h in the presence of LPS or IL-1beta, an enhanced release of TNF was observed. 1 When when ADV WRB PronType=Int _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 first first ADV RB _ _ _ _ _ 6 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ _ 9 h h NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 Teflon Teflon PROPN NNP Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 21 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 washed wash VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 remove remove VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 then then ADV RB PronType=Dem _ _ _ _ 31 further further ADV RB _ _ _ _ _ 32 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 35 dishes dish NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 additional additional ADJ JJ Degree=Pos _ _ _ _ 39 20 20 NUM CD NumType=Card _ _ _ _ 40 h h NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 presence presence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 LPS LPS PROPN NNP Number=Sing _ _ _ _ 46 or or CCONJ CC _ _ _ _ _ 47 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 release release NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 TNF TNF PROPN NNP Number=Sing _ _ _ _ 56 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 57 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3896 # text = This was not the case when PBMC were pre-cultured in plastic multidishes in the presence of IL-10. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 case case NOUN NN Number=Sing _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 pre-cultured pre-culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 12 multidishes multidish NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3897 # text = TNF mRNA expression induced by LPS was decreased when the pre-treatment of PBMC with IL-10 was performed on plastic, whereas this was not the case when cells were pre-cultured with IL-10 on Teflon. 1 TNF TNF PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 10 10 NUM CD NumType=Card _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ _ 29 when when ADV WRB PronType=Int _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 pre-cultured pre-culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 10 10 NUM CD NumType=Card _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 Teflon Teflon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3898 # text = Furthermore, NFkappaB translocation following LPS activation was higher after IL-10 pre-treatment on Teflon than on plastic. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 higher higher ADJ JJR Degree=Cmp _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 Teflon Teflon PROPN NNP Number=Sing _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3899 # text = Interestingly, an enhanced frequency of CD16 and CD68(+) cells among the CD14(+) cells was observed in the presence of IL-10, independently of the pre-culture conditions of the PBMC. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 frequency frequency NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD16 CD16 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD68 Cd68 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 +) +) PUNCT -RRB- _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 among among ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD14 Cd14 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 +) +) PUNCT -RRB- _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 independently independently ADV RB _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 pre-culture pre-culture ADJ JJ Degree=Pos _ _ _ _ 33 conditions condition NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3900 # text = Altogether, these results indicate that the IL-10-induced up-regulation of cytokine production depends on the prevention of monocyte adherence by red cells in the whole blood assays or by cultures of PBMC on Teflon. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 prevention prevention NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 25 adherence adherence NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 red red ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 whole whole ADJ JJ Degree=Pos _ _ _ _ 32 blood blood NOUN NN Number=Sing _ _ _ _ 33 assays assay NOUN NNS Number=Plur _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 cultures culture NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 Teflon Teflon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3901 # text = In contrast, the adherence parameter has no effect on the IL-10-induced modulation of some monocyte surface markers. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 adherence adherence NOUN NN Number=Sing _ _ _ _ 6 parameter parameter NOUN NN Number=Sing _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 modulation modulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3902 # text = Document 003001274 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001274 003001274 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3903 # text = Sequence analysis and expression in cultured lymphocytes of the human FOSB gene (G0S3). 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 FOSB Fosb NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 G0S3 G0S3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3904 # text = G0S3 is a member of a set of putative G0/G1 switch regulatory genes (G0S genes) selected by screening cDNA libraries prepared from human blood mononuclear cells cultured for 2 hr with lectin and cycloheximide. 1 G0S3 G0S3 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 set set NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 G0/G1 G0/G1 PROPN NNP Number=Sing _ _ _ _ 11 switch switch VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 G0 G0 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 S S NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 screening scree VERB VBG VerbForm=Ger _ _ _ _ 22 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 23 libraries library NOUN NNS Number=Plur _ _ _ _ 24 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 blood blood NOUN NN Number=Sing _ _ _ _ 28 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 2 2 NUM CD NumType=Card _ _ _ _ 33 hr hr NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lectin lectin NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3905 # text = The sequence shows high homology with the murine FOSB gene, which encodes a component of the AP1 transcriptional regulator. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 homology homology NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 murine murine NOUN NN Number=Sing _ _ _ _ 9 FOSB Fosb NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3906 # text = Comparison of cDNA and genomic sequences reveals a 4-exon structure characteristic of the FOS family of genes. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 sequences sequence NOUN NNS Number=Plur _ _ _ _ 7 reveals reveal NOUN NNS Number=Plur _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 exon exon NOUN NN Number=Sing _ _ _ _ 12 structure structure NOUN NN Number=Sing _ _ _ _ 13 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 FOS FOS ADJ JJ Degree=Pos _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3907 # text = Freshly isolated cells show high levels of FOSB/G0S3 and FOS/G0S7 mRNAs, which decline rapidly during incubation in culture medium. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 FOSB FOSB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 /G0S3 /G0S3 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 FOS FOS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 /G0S7 /G0S7 NOUN NN Number=Sing _ _ _ _ 13 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 decline decline VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 incubation incubation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 culture culture NOUN NN Number=Sing _ _ _ _ 22 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3908 # text = The kinetics of expression suggest that the high initial levels are caused by the isolation procedure, and do not reflect constitutive expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 initial initial ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 isolation isolation NOUN NN Number=Sing _ _ _ _ 16 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 reflect reflect VERB VB VerbForm=Inf _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3909 # text = In cells preincubated for a day, levels of FOS mRNA reach a maximum 20 min after the addition of lectin and decline to control levels over the next 3 hr. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 day day NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FOS FOS PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 reach reach VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 15 20 20 NUM CD NumType=Card _ _ _ _ 16 min min NOUN NNS Number=Plur _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 lectin lectin NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 decline decline NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 control control VERB VB VerbForm=Inf _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 over over ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 next next ADJ JJ Degree=Pos _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3910 # text = Levels of FOSB mRNA reach a maximum 40 min after the addition of lectin and decline to control levels over the next 6 hr. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 reach reach VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 maximum maximum NOUN NN Number=Sing _ _ _ _ 8 40 40 NUM CD NumType=Card _ _ _ _ 9 min min NOUN NNS Number=Plur _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 addition addition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 lectin lectin NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 decline decline NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 control control VERB VB VerbForm=Inf _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 over over ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 next next ADJ JJ Degree=Pos _ _ _ _ 23 6 6 NUM CD NumType=Card _ _ _ _ 24 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3911 # text = In freshly isolated cells, both FOS and FOSB mRNAs increase dramatically in response to the protein synthesis inhibitor cycloheximide. 1 In in ADP IN _ _ _ _ _ 2 freshly freshly ADV RB _ _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 FOS FOS PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 10 mRNAs mRNAs PROPN NNP Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 dramatically dramatically ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3912 # text = In preincubated cells, the cycloheximide response is decreased, especially in the case of FOSB. 1 In in ADP IN _ _ _ _ _ 2 preincubated preincubate ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 especially especially ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 case case NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FOSB FOSB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3913 # text = These differences in expression of FOS and FOSB suggest different roles and regulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FOS FOS PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 9 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 roles role NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3914 # text = Regions of low base order-dependent stem-loop potential in the region of the gene are defined. 1 Regions region NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 base base NOUN NN Number=Sing _ _ _ _ 5 order order NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 stem stem NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 loop loop NOUN NN Number=Sing _ _ _ _ 11 potential potential NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3915 # text = These indicate where base order has been adapted for purposes other than stem-loop stability (e.g., encoding proteins or gene regulation). 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 where where ADV WRB PronType=Int _ _ _ _ 4 base base NOUN NN Number=Sing _ _ _ _ 5 order order NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 adapted adapt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 purposes purpose NOUN NNS Number=Plur _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 stem stem NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 loop loop NOUN NN Number=Sing _ _ _ _ 16 stability stability NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3916 # text = Regions of low potential in a 68.5-kb genomic segment containing the FOSB gene suggest that the potential may help locate genes in uncharted DNA sequences. 1 Regions region NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 potential potential NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 68.5 68.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kb kb NOUN NN Number=Sing _ _ _ _ 10 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 15 gene gene PROPN NNP Number=Sing _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 potential potential NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 help help VERB VB VerbForm=Inf _ _ _ _ 22 locate locate VERB VB VerbForm=Inf _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 uncharted uncharted ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3917 # text = Document 003001275 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001275 003001275 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3918 # text = Biphasic control of NF-kappa B activation induced by the triggering of HLA-DR antigens expressed on B cells. 1 Biphasic Biphasic ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 triggering triggering NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DR dr PROPN NNP Number=Sing _ _ _ _ 17 antigens antigen NOUN NNS Number=Plur _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3919 # text = The regulation of NF-kappa B activation following the triggering of HLA-DR antigens by mAb L243 has been studied at various times in Raji cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 triggering triggering NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 DR dr PROPN NNP Number=Sing _ _ _ _ 16 antigens antigen NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 mAb mAb PROPN NNP Number=Sing _ _ _ _ 19 L243 L243 NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 times time NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Raji Raji PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3920 # text = Electrophoretic mobility shift assays demonstrated a strong increase of NF-kappa B DNA binding after triggering of HLA-DR antigens. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays ADV RB _ _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 after after SCONJ IN _ _ _ _ _ 17 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DR dr PROPN NNP Number=Sing _ _ _ _ 22 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3921 # text = Using TNF-alpha-activity neutralizing antibodies, the authors demonstrated that the upregulation of NF-kappa B was found to depend, at later time point, on an autocrine effect of TNF-alpha secreted following triggering of HLA-DR antigens. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 alpha-activity alpha-activity NOUN NN Number=Sing _ _ _ _ 5 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 6 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 authors author NOUN NNS Number=Plur _ _ _ _ 10 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 depend depend VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 later later ADV RB _ _ _ _ _ 26 time time NOUN NN Number=Sing _ _ _ _ 27 point point NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 autocrine autocrine ADJ JJ Degree=Pos _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha ADV RB _ _ _ _ _ 37 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 following follow VERB VBG VerbForm=Ger _ _ _ _ 39 triggering triggering NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 DR dr PROPN NNP Number=Sing _ _ _ _ 44 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3922 # text = In contrast, it was found to be TNF-alpha independent in the early time point. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha ADV RB _ _ _ _ _ 12 independent independent ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 point point NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3923 # text = Moreover, the upregulation of NF-kappa B binding activity is regulated by the triggering of selected epitopes of HLA-DR antigens. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 triggering triggering NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 epitopes epitope NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 DR dr PROPN NNP Number=Sing _ _ _ _ 24 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3924 # text = In fact, mAb L243 but not the staphylococcal superantigens, staphylococcal exotoxin toxic shock syndrome toxin-I or staphylococcal enterotoxin B, regulate the NF-kappa B binding activity. 1 In in ADP IN _ _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mAb mAb PROPN NNP Number=Sing _ _ _ _ 5 L243 L243 NUM CD NumType=Card _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 10 superantigens superantigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 13 exotoxin exotoxin ADP IN _ _ _ _ _ 14 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 17 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 22 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3925 # text = Document 003001276 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001276 003001276 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3926 # text = Characterization of a new isoform of the NFAT (nuclear factor of activated T cells) gene family member NFATc [published erratum appears in J Biol Chem 1996 Dec 27;271(52):33705] 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 member member NOUN NN Number=Sing _ _ _ _ 20 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 erratum erratum NOUN NN Number=Sing _ _ _ _ 24 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 J j PROPN NNP Number=Sing _ _ _ _ 27 Biol Biol PROPN NNP Number=Sing _ _ _ _ 28 Chem Chem PROPN NNP Number=Sing _ _ _ _ 29 1996 1996 NUM CD NumType=Card _ _ _ _ 30 Dec Dec PROPN NNP Number=Sing _ _ _ _ 31 27;271 27;271 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 52) 52) SYM NFP _ _ _ _ SpaceAfter=No 34 :33705 :33705 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 3927 # text = The cyclosporin A (CsA)/FK506-sensitive nuclear factor of activated T cells (NFAT) plays a key role in the inducible expression of cytokine genes in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 3 A a NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 /FK506 /FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -sensitive -sensitive ADJ JJ Degree=Pos _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 key key ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3928 # text = Although NFAT has been recently shown to be inducible in several non-T immune cells, the NFAT gene family members characterized to date have been isolated only from T cells. 1 Although although SCONJ IN _ _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 recently recently ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 non-T non-t ADJ JJ Degree=Pos _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 date date NOUN NN Number=Sing _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 T T PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3929 # text = To further characterize NFAT function in human B cells and to demonstrate cytokine gene specificity of NFAT proteins, we report here the isolation and characterization of a cDNA clone from the Raji B cell line. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 characterize characterize NOUN NN Number=Sing _ _ _ _ 4 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 specificity specificity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 here here ADV RB PronType=Dem _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 isolation isolation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 characterization characterization NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 30 clone clone NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Raji Raji PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3930 # text = The cDNA clone encodes a new isoform, NFATc.beta, of the NFAT gene family member NFATc (designated here NFATc.alpha). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 member member NOUN NN Number=Sing _ _ _ _ 17 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 here here ADV RB PronType=Dem _ _ _ _ 21 NFATc.alpha NFATc.alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3931 # text = The amino acid sequence of NFATc.beta differs from that of NFATc.alpha in the first NH2-terminal 29 residues and contains an additional region of 142 residues at the COOH terminus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amino amino DET DT _ _ _ _ _ 3 acid acid ADJ JJ Degree=Pos _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 7 differs differ NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFATc.alpha NFATc.alpha PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 15 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 29 29 NUM CD NumType=Card _ _ _ _ 19 residues residue NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 additional additional ADJ JJ Degree=Pos _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 142 142 NUM CD NumType=Card _ _ _ _ 27 residues residue NOUN NNS Number=Plur _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 COOH COOH ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 31 terminus terminus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3932 # text = Northern analysis using a probe encompassing a common region of both isoforms showed two mRNA species of 2.7 and 4.5 kilobase pairs, while an NFATc.beta-specific probe detected only the 4.5-kilobase pair mRNA which was preferentially expressed in the spleen. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 probe probe NOUN NN Number=Sing _ _ _ _ 6 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 species species NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 2.7 2.7 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 4.5 4.5 NUM CD NumType=Card _ _ _ _ 21 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 22 pairs pair NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 28 probe probe NOUN NN Number=Sing _ _ _ _ 29 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 4.5 4.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 35 pair pair NOUN NN Number=Sing _ _ _ _ 36 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 37 which which PRON WDT PronType=Rel _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 preferentially preferentially ADV RB _ _ _ _ _ 40 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3933 # text = Transient expression of NFATc.beta was capable of activating an interleukin-2 NFAT-driven reporter gene in stimulated Jurkat cells in a CsA-sensitive manner. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 activating activate VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3934 # text = However, NFATc.beta neither bound to the kappa3 element ( an NFAT-binding site ) in the tumor necrosis factor-alpha promoter nor activated the tumor necrosis factor-alpha promoter in cotransfection assays. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 4 neither neither DET DT _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa3 kappa3 NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 nor nor CCONJ CC _ _ _ _ _ 26 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 36 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3935 # text = These data suggest that different members or isoforms of NFAT gene family may regulate inducible expression of different cytokine genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 members member NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3936 # text = Document 003001277 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001277 003001277 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3937 # text = Activation of nuclear factor kappa B in human neuroblastoma cell lines. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3938 # text = The nuclear factor kappa B (NF-kappa B) is a eukaryotic transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3939 # text = In B cells and macrophages it is constitutively present in cell nuclei, whereas in many other cell types, NF-kappa B translocates from cytosol to nucleus as a result of transduction by tumor necrosis factor alpha (TNF alpha), phorbol ester, and other polyclonal signals. 1 In in ADP IN _ _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas wherea NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 many many ADJ JJ Degree=Pos _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 translocates translocate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 nucleus nucleus VERB VB VerbForm=Inf _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 result result NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transduction transduction NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TNF Tnf NOUN NN Number=Sing _ _ _ _ 42 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 46 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 other other ADJ JJ Degree=Pos _ _ _ _ 50 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 51 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3940 # text = Using neuroblastoma cell lines as models, we have shown that in neural cells NF-kappa B was present in the cytosol and translocated into nuclei as a result of TNF alpha treatment. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 neural neural ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 present present ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 into into ADP IN _ _ _ _ _ 27 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 result result NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 TNF TNF PROPN NNP Number=Sing _ _ _ _ 33 alpha alpha ADP IN _ _ _ _ _ 34 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3941 # text = The TNF alpha-activated NF-kappa B was transcriptionally functional. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TNF TNF PROPN NNP Number=Sing _ _ _ _ 3 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3942 # text = NF-kappa B activation by TNF alpha was not correlated with cell differentiation or proliferation. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3943 # text = However, reagents such as nerve growth factor (NGF) and the phorbol ester phorbol 12-myristate 13-acetate (PMA), which induce phenotypical differentiation of the SH-SY5Y neuroblastoma cell line, activated NF-kappa B, but only in that particular cell line. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 reagents reagent NOUN NNS Number=Plur _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 nerve nerve ADJ JJ Degree=Pos _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NGF NGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 ester ester NOUN NN Number=Sing _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 myristate myristate NOUN NN Number=Sing _ _ _ _ 20 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ SpaceAfter=No 22 acetate acetate NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 phenotypical phenotypical ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 SH Sh NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 SY5Y SY5y NOUN NN Number=Sing _ _ _ _ 36 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 but but CCONJ CC _ _ _ _ _ 47 only only ADV RB _ _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 50 particular particular ADJ JJ Degree=Pos _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3944 # text = In a NGF-responsive rat pheochromocytoma cell line, PC12, PMA activated NF-kappa B, whereas NGF did not. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 NGF NGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 pheochromocytoma pheochromocytoma NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 PC12 Pc12 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 whereas whereas SCONJ IN _ _ _ _ _ 21 NGF NGF PROPN NNP Number=Sing _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3945 # text = In other neuroblastoma cell lines, such as SK-N-Be(2), the lack of PMA induction of differentiation was correlated with the lack of NF-kappa B activation. 1 In in ADP IN _ _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 SK SK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Be be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 lack lack NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lack lack NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3946 # text = We found, moreover, that in SK-N-Be(2) cells protein kinase C (PKC) enzymatic activity was much lower compared with that in a control cell line and that the low PKC enzymatic activity was due to low PKC protein expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 SK SK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Be be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 much much ADV RB _ _ _ _ _ 27 lower lower ADJ JJR Degree=Cmp _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 control control NOUN NN Number=Sing _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 low low ADJ JJ Degree=Pos _ _ _ _ 40 PKC Pkc NOUN NN Number=Sing _ _ _ _ 41 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 due due ADP IN _ _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 low low ADJ JJ Degree=Pos _ _ _ _ 47 PKC PKC NOUN NN Number=Sing _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3947 # text = NF-kappa B was not activated by retinoic acid, which induced morphological differentiation of all the neuroblastoma cell lines used in the present study. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 all all DET PDT _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ _ 22 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3948 # text = Thus, NF-kappa B activation was not required for neuroblastoma cell differentiation. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3949 # text = Furthermore, the results obtained with TNF alpha proved that NF-kappa B activation was not sufficient for induction of neuroblastoma differentiation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha ADV RB _ _ _ _ _ 9 proved prove VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3950 # text = Document 003001278 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001278 003001278 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3951 # text = Tap: a novel cellular protein that interacts with tip of herpesvirus saimiri and induces lymphocyte aggregation. 1 Tap tap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 tip tip NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 13 saimiri saimirus NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 induces induces NOUN NNS Number=Plur _ _ _ _ 16 lymphocyte lymphocyte VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 aggregation aggregation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3952 # text = Tip of herpesvirus saimiri associates with Lck and down-regulates Lck-mediated activation. 1 Tip tip NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 4 saimiri saimiri NOUN NN Number=Sing _ _ _ _ 5 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 Lck Lck PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 down down ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 Lck-mediated Lck-mediated ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3953 # text = We identified a novel cellular Tip-associated protein (Tap) by a yeast two-hybrid screen. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 cellular celular ADJ JJ Degree=Pos _ _ _ _ 6 Tip tip NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Tap tap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 18 screen screen NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3954 # text = Tap associated with Tip following transient expression in COS-1 cells and stable expression in human Jurkat-T cells. 1 Tap tap NOUN NN Number=Sing _ _ _ _ 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 Tip tip PROPN NNP Number=Sing _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 transient transient ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 stable stable ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 T T PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3955 # text = Expression of Tip and Tap in Jurkat-T cells induced dramatic cell aggregation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Tip tip PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Tap tap PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 aggregation aggregation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3956 # text = Aggregation was likely caused by the up-regulated surface expression of adhesion molecules including integrin alpha, L-selectin, ICAM-3, and H-CAM. 1 Aggregation aggregation NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 likely likely ADV RB _ _ _ _ _ 4 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 integrin integrin ADP IN _ _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 L-selectin L-selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CAM CAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3957 # text = Furthermore, NF-kappaB transcriptional factor of aggregated cells had approximately 40-fold higher activity than that of parental cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 aggregated aggregated ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 fold fold VERB VB VerbForm=Inf _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 parental parental ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3958 # text = Thus, Tap is likely to be an important cellular mediator of Tip function in T cell transformation by herpesvirus saimiri. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tap tap PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 likely likely ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tip tip NOUN NN Number=Sing _ _ _ _ 14 function function NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 transformation transformation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 21 saimiri saimiri NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3959 # text = Document 003001279 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001279 003001279 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3960 # text = Cell-type-specific regulation of the human tumor necrosis factor alpha gene in B cells and T cells by NFATp and ATF-2/JUN. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha ADP IN _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 T t ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 26 JUN JUN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3961 # text = The human tumor necrosis factor alpha (TNF-alpha) gene is one of the earliest genes transcribed after the stimulation of a B cell through its antigen receptor or via the CD-40 pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 via via ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 40 40 NUM CD NumType=Card _ _ _ _ 37 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3962 # text = In both cases, induction of TNF-alpha gene transcription can be blocked by the immunosuppressants cyclosporin A and FK506, which suggested a role for the NFAT family of proteins in the regulation of the gene in B cells. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 18 cyclosporin cyclosporin ADP IN _ _ _ _ _ 19 A a PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 B b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3963 # text = Furthermore, in T cells, two molecules of NFATp bind to the TNF-alpha promoter element kappa 3 in association with ATF-2 and Jun proteins bound to an immediately adjacent cyclic AMP response element (CRE) site. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 11 bind bind NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 association association NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Jun Jun PROPN NNP Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 immediately immediately ADV RB _ _ _ _ _ 34 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 35 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 36 AMP Amp NOUN NN Number=Sing _ _ _ _ 37 response response NOUN NN Number=Sing _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3964 # text = Here, using the murine B-cell lymphoma cell line A20, we show that the TNF-alpha gene is regulated in a cell-type-specific manner. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 A20 A20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3965 # text = In A20 B cells, the TNF-alpha gene is not regulated by NFATp bound to the kappa 3 element. 1 In in ADP IN _ _ _ _ _ 2 A20 A20 NUM CD NumType=Card _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3966 # text = Instead, ATF-2 and Jun proteins bind to the composite kappa 3/CRE site and NFATp binds to a newly identified second NFAT site centered at -76 nucleotides relative to the TNF-alpha transcription start site. 1 Instead instead ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 composite composite NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 3/CRE 3/cre NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NFATp NFATp NOUN NN Number=Sing _ _ _ _ 18 binds bind NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 newly newly ADV RB _ _ _ _ _ 22 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 24 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 76 76 NUM CD NumType=Card _ _ _ _ 30 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 31 relative relative ADV RB _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 start start NOUN NN Number=Sing _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3967 # text = This new site plays a critical role in the calcium-mediated, cyclosporin A-sensitive induction of TNF-alpha in both A20 B cells and Ar-5 cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 calcium- calcium- SYM SYM _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 A20 A20 NUM CD NumType=Card _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ar ar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 5 5 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3968 # text = Consistent with these results, quantitative DNase footprinting of the TNF-alpha promoter using increasing amounts of recombinant NFATp demonstrated that the -76 site binds to NFATp with a higher affinity than the kappa 3 site. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 7 DNase DNase NOUN NN Number=Sing _ _ _ _ 8 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 17 amounts amount NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 20 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 21 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 76 76 NUM CD NumType=Card _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ _ 27 binds bind NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 NFATp NFATp VERB VB VerbForm=Inf _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 higher higher ADJ JJR Degree=Cmp _ _ _ _ 33 affinity affinity NOUN NN Number=Sing _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 3 3 NUM CD NumType=Card _ _ _ _ 38 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3969 # text = Two other previously unrecognized NFATp-binding sites in the proximal TNF-alpha promoter were also identified by this analysis. 1 Two two NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 unrecognized unrecognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NFATp NFATp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3970 # text = Thus, through the differential use of the same promoter element, the composite kappa 3/CRE site, the TNF-alpha gene is regulated in a cell-type-specific manner in response to the same extracellular signal. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 differential differential ADJ JJ Degree=Pos _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 same same ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 composite composite ADJ JJ Degree=Pos _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 3/CRE 3/cre NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 same same ADJ JJ Degree=Pos _ _ _ _ 37 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 38 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3971 # text = Document 003001280 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001280 003001280 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3972 # text = Cell type specificity and activation requirements for NFAT-1 (nuclear factor of activated T-cells) transcriptional activity determined by a new method using transgenic mice to assay transcriptional activity of an individual nuclear factor. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 specificity specificity NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 requirements requirement NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 new new ADJ JJ Degree=Pos _ _ _ _ 25 method method NOUN NN Number=Sing _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ 27 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 28 mice mouse NOUN NNS Number=Plur _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 assay assay VERB VB VerbForm=Inf _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 individual individual ADJ JJ Degree=Pos _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3973 # text = Nuclear factor of activated T-cells (NFAT-1) is a transcription factor which is considered to be an important regulator in early T-cell activation. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 regulator regulator NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 early early ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3974 # text = We have developed a system to monitor the transcriptional activity of NFAT-1 at the single cell level in whole animals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 system system NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 single single ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 whole whole ADJ JJ Degree=Pos _ _ _ _ 22 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3975 # text = The system is based on the use of an oligomerized NFAT-1 binding motif that directs transcription of SV40 T-antigen in transgenic mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 system system NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 oligomerized oligomerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 SV40 SV40 NUM CD NumType=Card _ _ _ _ 21 T- T- SYM SYM _ _ _ _ SpaceAfter=No 22 antigen antigen NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3976 # text = This report represents the first demonstration that a multimerized short binding motif can function appropriately in transgenic mice. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 report report NOUN NN Number=Sing _ _ _ _ 3 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 short short ADJ JJ Degree=Pos _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 function function VERB VB VerbForm=Inf _ _ _ _ 15 appropriately appropriately ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 18 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3977 # text = NFAT-1 activity had previously been thought to be confined to activated T-lymphocytes upon release of intracellular calcium. 1 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 previously previously ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 release release NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3978 # text = By targeting NFAT-1-dependent gene expression in transgenic mice we discovered new sites of NFAT-1 activity. 1 By by SCONJ IN _ _ _ _ _ 2 targeting target VERB VBG VerbForm=Ger _ _ _ _ 3 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 12 mice mouse NOUN NNS Number=Plur _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 discovered discover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3979 # text = Besides in T-lymphocytes NFAT-1 activity could also be induced in T-lymphocyte-depleted spleen cells and purified B-lymphocytes and requires agents that both release intracellular calcium and activate protein kinase C. 1 Besides besides ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 spleen spleen NOUN NNS Number=Plur _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 agents agent NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 release release NOUN NN Number=Sing _ _ _ _ 31 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 32 calcium calcium NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activate activate ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3980 # text = A difference in the time course of appearance of NFAT-1 activity between T-lymphocytes and non-T-lymphocytes was revealed. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 course course NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3981 # text = Constitutive expression was observed in a small population of cells in the dermis and some mice have developed skin lesions. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 small small ADJ JJ Degree=Pos _ _ _ _ 8 population population NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 dermis dermis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 mice mouse NOUN NNS Number=Plur _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 skin skin ADJ JJ Degree=Pos _ _ _ _ 20 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3982 # text = Interestingly, the tissue pattern of expression of the NFAT-1 activity resembles the expression pattern described for HIV-LTR/tat transgenic mice (Vogel, J., Hinrichs, S. H., Reynolds, R. K., Luciw, P. A., and Jay, G. (1988) Nature 335, 606-611). 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 5 pattern pattern NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 resembles resemble NOUN NNS Number=Plur _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 pattern pattern NOUN NN Number=Sing _ _ _ _ 18 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 24 tat tat NOUN NN Number=Sing _ _ _ _ 25 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Vogel Vogel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 J. J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 Hinrichs Hinrichs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 S. S. PROPN NNP Number=Sing _ _ _ _ 35 H. H. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 Reynolds Reynolds PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 R. R. PROPN NNP Number=Sing _ _ _ _ 40 K. K. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 Luciw Luciw PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 P. P. PROPN NNP Number=Sing _ _ _ _ 45 A. A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 Jay Jay PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 G. G. PROPN NNP Number=Sing _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 1988 1988 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 Nature nature NOUN NN Number=Sing _ _ _ _ 55 335 335 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 606-611 606-611 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3983 # text = This similarity in expression and the fact that NFAT-1 has been shown to bind functional sequences in HIV-LTR suggest a role for NFAT-1 in dermal activation of the HIV-LTR. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 similarity similarity NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that ADV WRB PronType=Rel _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 bind bind VERB VB VerbForm=Inf _ _ _ _ 17 functional functional ADJ JJ Degree=Pos _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ _ 23 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3984 # text = Document 003001281 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001281 003001281 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3985 # text = The ubiquitous octamer-binding protein(s) is sufficient for transcription of immunoglobulin genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 3 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3986 # text = All immunoglobulin genes contain a conserved octanucleotide promoter element, ATGCAAAT, which has been shown to be required for their normal B-cell-specific transcription. 1 All all DET DT _ _ _ _ _ 2 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 contain contain VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 octanucleotide octanucleotide NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ATGCAAAT ATGCAAAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3987 # text = Proteins that bind this octamer have been purified, and cDNAs encoding octamer-binding proteins have been cloned. 1 Proteins Protein NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 octamer octamer NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cDNAs cDNAs SCONJ IN _ _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3988 # text = Some of these proteins (referred to as OTF-2) are lymphoid specific, whereas at least one other, and possibly more (referred to as OTF-1), is found ubiquitously in all cell types. 1 Some some DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas ADV RB _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 possibly possibly ADV RB _ _ _ _ _ 25 more more ADV RBR _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 ubiquitously ubiquitously ADV RB _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 all all DET DT _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3989 # text = The exact role of these different proteins in directing the tissue-specific expression of immunoglobulin genes is unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 exact exact ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 different different ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 directing direct VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3990 # text = We have identified two human pre-B-cell lines that contain extremely low levels of OTF-2 yet still express high levels of steady-state immunoglobulin heavy-chain mRNA in vivo and efficiently transcribe an immunoglobulin gene in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 pre-B pre-b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 extremely extremely ADV RB _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 yet yet CCONJ CC _ _ _ _ _ 20 still still ADV RB _ _ _ _ _ 21 express express ADJ JJ Degree=Pos _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 state state NOUN NN Number=Sing _ _ _ _ 28 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 29 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 -chain -chain ADJ JJ Degree=Pos _ _ _ _ 31 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vivo vivo NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 efficiently efficiently ADV RB _ _ _ _ _ 36 transcribe transcribe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3991 # text = Addition of a highly enriched preparation of OTF-1 made from one of these pre-B cells or from HeLa cells specifically stimulated in vitro transcription of an immunoglobulin gene. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 highly highly ADV RB _ _ _ _ _ 5 enriched enriched ADJ JJ Degree=Pos _ _ _ _ 6 preparation preparation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 made make VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 pre pre X AFX _ _ _ _ SpaceAfter=No 17 -B -b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3992 # text = Furthermore, OFT-1 appeared to have approximately the same transactivation ability as OTF-2 when normalized for binding activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 OFT OFT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 have have VERB VB VerbForm=Inf _ _ _ _ 9 approximately approximately ADV RB _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 same same ADJ JJ Degree=Pos _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 normalized normalized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3993 # text = These results suggest that OTF-1, without OTF-2, is sufficient for transcription of immunoglobulin genes and that OTF-2 alone is not responsible for the B-cell-specific regulation of immunoglobulin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 without without ADP IN _ _ _ _ _ 10 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 OTF Otf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 alone alone ADV RB _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3994 # text = Document 003001282 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001282 003001282 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3995 # text = alpha-Tocopheryl succinate inhibits monocytic cell adhesion to endothelial cells by suppressing NF-kappa B mobilization. 1 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 Tocopheryl Tocopheryl PROPN NNP Number=Sing _ _ _ _ 4 succinate succinate ADJ JJ Degree=Pos _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3996 # text = The adherence of monocytes to activated endothelium is an early event in atherogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adherence adherence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 event event NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3997 # text = Because antioxidants have been considered to be of antiatherosclerotic potential, we investigated the effects of alpha-tocopherol (TCP) and its acetate and succinate esters on monocyte adhesion to cytokine-stimulated human umbilical vein endothelial cells (HUVEC). 1 Because because SCONJ IN _ _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 antiatherosclerotic antiatherosclerotic ADJ JJ Degree=Pos _ _ _ _ 10 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 TCP TCP NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 acetate acetate NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 succinate succinate ADJ JJ Degree=Pos _ _ _ _ 28 esters ester NOUN NNS Number=Plur _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 38 vein vein NOUN NN Number=Sing _ _ _ _ 39 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3998 # text = Endothelial cells were treated with TCP, alpha-tocopherol acetate (TCP acetate), or alpha-tocopheryl succinate (TCP succinate) before stimulation with tumor necrosis factor-alpha (TNF-alpha; 10 U/ml, 6 h) or interleukin-1 beta (IL-1 beta; 10 U/ml, 6 h). 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TCP Tcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 11 acetate acetate NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TCP TCP NOUN NN Number=Sing _ _ _ _ 14 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 tocopheryl tocopheryl NOUN NN Number=Sing _ _ _ _ 21 succinate succinate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TCP Tcp NOUN NN Number=Sing _ _ _ _ 24 succinate succinate NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 before before ADP IN _ _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 tumor tumor NOUN NN Number=Sing _ _ _ _ 30 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ; ; PUNCT , _ _ _ _ _ 39 10 10 NUM CD NumType=Card _ _ _ _ 40 U/ml u/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 6 6 NUM CD NumType=Card _ _ _ _ 43 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 beta beta NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ; ; PUNCT , _ _ _ _ _ 56 10 10 NUM CD NumType=Card _ _ _ _ 57 U/ml u/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 6 6 NUM CD NumType=Card _ _ _ _ 60 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3999 # text = Cytokine-stimulated cell surface expression of vascular cell adhesion molecule-1 (VCAM-1, CD106) and E-selectin (ELAM-1, CD62E), but not of intercellular adhesion molecule-1 (ICAM-1, CD54), was time- and dose-dependently inhibited by TCP succinate but not by TCP or TCP acetate. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 CD106 CD106 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ELAM ELAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD62E CD62E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 not not ADV RB _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 CD54 CD54 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 dependently dependently ADV RB _ _ _ _ _ 54 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 TCP TCP NOUN NN Number=Sing _ _ _ _ 57 succinate succinate NOUN NN Number=Sing _ _ _ _ 58 but but CCONJ CC _ _ _ _ _ 59 not not ADV RB _ _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 TCP TCP NOUN NN Number=Sing _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 TCP TCP NOUN NN Number=Sing _ _ _ _ 64 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 4000 # text = TCP succinate (200 microM, 24 h) reduced TNF-induced VCAM-1 and E-selectin expression from a specific mean fluorescence intensity of 151 +/- 28 to 12 +/- 4 channels and from 225 +/- 38 to 79 +/- 21 channels, respectively. 1 TCP TCp SYM NFP _ _ _ _ _ 2 succinate succinate NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 200 200 NUM CD NumType=Card _ _ _ _ 5 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 24 24 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 E- E- SYM SYM _ _ _ _ SpaceAfter=No 19 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 mean mean NOUN NN Number=Sing _ _ _ _ 25 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 26 intensity intensity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 151 151 NUM CD NumType=Card _ _ _ _ 29 +/- +/- SYM SYM _ _ _ _ _ 30 28 28 NUM CD NumType=Card _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 12 12 NUM CD NumType=Card _ _ _ _ 33 +/- +/- SYM SYM _ _ _ _ _ 34 4 4 NUM CD NumType=Card _ _ _ _ 35 channels channel NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 225 225 NUM CD NumType=Card _ _ _ _ 39 +/- +/- SYM SYM _ _ _ _ _ 40 38 38 NUM CD NumType=Card _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 79 79 NUM CD NumType=Card _ _ _ _ 43 +/- +/- SYM SYM _ _ _ _ _ 44 21 21 NUM CD NumType=Card _ _ _ _ 45 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4001 # text = Succinate alone had no effect. 1 Succinate Succinate PROPN NNP Number=Sing _ _ _ _ 2 alone alone ADV RB _ _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 4002 # text = Decreased adhesion molecule expression was associated with a reduction of monocytic cell adhesion. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 reduction reduction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4003 # text = TCP succinate (20 microM, 72 h), but not TCP (200 microM, 72 h), reduced U-937 cell adhesion to TNF-alpha-stimulated (10 U/ml, 6 h) HUVEC by 30% (P < 0.025) and to IL-1 beta-stimulated HUVEC by 56% (P < 0.010). 1 TCP TCp SYM NFP _ _ _ _ _ 2 succinate succinate NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 20 20 NUM CD NumType=Card _ _ _ _ 5 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 72 72 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 TCP Tcp NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 200 200 NUM CD NumType=Card _ _ _ _ 16 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 72 72 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 937 937 NUM CD NumType=Card _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ _ 36 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 6 6 NUM CD NumType=Card _ _ _ _ 40 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 HUVEC HUVEC NOUN NN Number=Sing _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 % % SYM NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 P p NOUN NN Number=Sing _ _ _ _ 48 < < PUNCT -LRB- _ _ _ _ _ 49 0.025 0.025 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ _ 56 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 HUVEC Huvec PROPN NNP Number=Sing _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 56 56 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 % % SYM NN Number=Sing _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 P p NOUN NN Number=Sing _ _ _ _ 65 < < PUNCT -LRB- _ _ _ _ _ 66 0.010 0.010 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 4004 # text = Electrophoretic mobility-shift assays of HUVEC nuclear proteins revealed a decrease in TNF-alpha-stimulated nuclear factor-kappa B (NF-kappa B) activation after pretreatment of HUVEC with TCP succinate but not with TCP, TCP acetate, or succinate alone. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HUVEC Huvec ADJ JJ Degree=Pos _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 decrease decrease NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 TCP TCP NOUN NN Number=Sing _ _ _ _ 37 succinate succinate NOUN NN Number=Sing _ _ _ _ 38 but but CCONJ CC _ _ _ _ _ 39 not not ADV RB _ _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 TCP TCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 TCP TCP PROPN NNP Number=Sing _ _ _ _ 44 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 or or CCONJ CC _ _ _ _ _ 47 succinate succinate VERB VB VerbForm=Inf _ _ _ _ 48 alone alone ADV RB _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4005 # text = In conclusion, we demonstrate that the vitamin E derivative TCP succinate prevents monocytic cell adhesion to cytokine-stimulated endothelial cells by inhibiting the activation of NF-kappa B, further emphasizing the antiatherosclerotic potential of lipid soluble antioxidants. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 9 E e NOUN NN Number=Sing _ _ _ _ 10 derivative derivative NOUN NN Number=Sing _ _ _ _ 11 TCP Tcp NOUN NN Number=Sing _ _ _ _ 12 succinate succinate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevents prevent NOUN NNS Number=Plur _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 further further SCONJ IN _ _ _ _ _ 34 emphasizing emphasize VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 antiatherosclerotic antiatherosclerotic ADJ JJ Degree=Pos _ _ _ _ 37 potential potential NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 40 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 41 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4006 # text = Document 003001283 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001283 003001283 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4007 # text = Activation of nuclear factor-kappaB by lipopolysaccharide in mononuclear leukocytes is prevented by inhibitors of cytosolic phospholipase A2. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 18 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 19 A2 a2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4008 # text = In monocytes, lipopolysaccharide induces synthesis and activity of the 85-kDa cytosolic phospholipase A2. 1 In in ADP IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 85 85 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 cytosolic cytosolic NOUN NN Number=Sing _ _ _ _ 15 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 16 A2 A2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4009 # text = This enzyme releases arachidonic acid and lyso-phospholipids from membranes which are metabolized to eicosanoids and platelet-activating-factor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 3 releases release VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 lyso lyso NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -phospholipids -phospholipid NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 membranes membrane NOUN NNS Number=Plur _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 metabolized metabolize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 eicosanoids eicosanoid NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -activating -activat VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 -factor -factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4010 # text = These lipid mediators increase activity of transcription factors and expression of cytokine genes indicating a function for cytosolic phospholipase A2 in signal transduction and inflammation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 3 mediators mediator NOUN NNS Number=Plur _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 19 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 20 A2 a2 NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 signal signal NOUN NN Number=Sing _ _ _ _ 23 transduction transduction NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4011 # text = We have shown previously that trifluoromethylketone inhibitors of cytosolic phospholipase 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 trifluoromethylketone trifluoromethylketone ADJ JJ Degree=Pos _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 10 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ # sent_id = 4012 # text = A2 suppressed interleukin-1beta protein and steady-state mRNA levels in human lipopolysaccharide-stimulated peripheral blood mononuclear leukocytes. 1 A2 A2 PART TO Abbr=Yes _ _ _ _ 2 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 state state NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 21 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4013 # text = In this study, the subcellular mechanisms were analyzed by which trifluoromethylketones interfere with gene expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Int _ _ _ _ 12 trifluoromethylketones trifluoromethylketones NOUN NNS Number=Plur _ _ _ _ 13 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4014 # text = We found that they reduced the initial interleukin-1beta mRNA transcription rate through prevention of degradation of inhibitor-kappaB alpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 initial initial ADJ JJ Degree=Pos _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNa SYM SYM _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 rate rate NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 prevention prevention NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 degradation degradation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappab NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4015 # text = Consequently, cytosolic activation, nuclear translocation and DNA-binding of nuclear factor-kappaB were decreased. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappab NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4016 # text = Trifluoromethylketones ameliorate chronic inflammation in vivo. 1 Trifluoromethylketones Trifluoromethylketone NOUN NNS Number=Plur _ _ _ _ 2 ameliorate ameliorate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 4 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 4017 # text = Thus, this therapeutic potency may reside in retention of inactive nuclear factor-kappaB in the cytosol thereby abrogating interleukin-1beta gene transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 5 potency potency NOUN NN Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 reside reside VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 retention retention NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappab NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 19 thereby thereby ADV RB _ _ _ _ _ 20 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 21 interleukin interleukin ADV RB _ _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4018 # text = Document 003001284 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001284 003001284 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4019 # text = The ability of BHRF1 to inhibit apoptosis is dependent on stimulus and cell type. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4020 # text = The development of resistance to host defense mechanisms such as tumor necrosis factor (TNF)- and Fas-mediated apoptosis of transformed or virus-infected cells may be a critical component in the development of disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 host host VERB VB VerbForm=Inf _ _ _ _ 7 defense defense NOUN NN Number=Sing _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 critical critical ADJ JJ Degree=Pos _ _ _ _ 32 component component NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 development development NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4021 # text = To find genes that protect cells from apoptosis, we used an expression cloning strategy and identified BHRF1, an Epstein-Barr virus (EBV) early-lytic-cycle protein with distant homology to Bcl-2, as an anti-apoptosis protein. 1 To to PART TO _ _ _ _ _ 2 find find VERB VB VerbForm=Inf _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 protect protect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 cloning cloning NOUN NN Number=Sing _ _ _ _ 15 strategy strategy NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Barr Barr PROPN NNP Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 early early ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 -lytic -lytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cycle cycle NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 distant distant ADJ JJ Degree=Pos _ _ _ _ 35 homology homology NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 anti-apoptosis anti-apoptosis ADJ JJ Degree=Pos _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4022 # text = Expression of BHRF1 in MCF-Fas cells conferred nearly complete resistance against both anti-Fas antibody and TNF-mediated apoptosis. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 MCF MCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 Fas Fas PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 nearly nearly ADV RB _ _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 against against ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 anti-Fas anti-Fas AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4023 # text = In addition, BHRF1 protected these cells from monocyte-mediated killing but failed to protect them from killing mediated by lymphokine-activated killer cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BHRF1 BHRF1 NUM CD NumType=Card _ _ _ _ 5 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 killing kille VERB VBG VerbForm=Ger _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 protect protect VERB VB VerbForm=Inf _ _ _ _ 16 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 killing kill NOUN NN Number=Sing _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 killer killer NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4024 # text = The ability of BHRF1 to protect MCF-Fas cells from apoptosis induced by various stimuli was identical to that of Bcl-2 and Bcl-xL. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 protect protect VERB VB VerbForm=Inf _ _ _ _ 7 MCF MCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Fas Fas PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 identical identical ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 xL xL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4025 # text = Moreover, the mechanism of action of BHRF1 resembled that of Bcl-2 and Bcl-xL as it inhibited TNF- and anti-Fas-induced activation of two enzymes participating in the apoptosis pathway, cytosolic phospholipase 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 action action NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 9 resembled resemble VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 xL xL NOUN NN Number=Sing _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 anti-Fas-induced anti-Fas-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 30 participating participate VERB VBG VerbForm=Ger _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 37 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ # sent_id = 4026 # text = A2 and caspase-3/CPP32, but did not interfere with the activation of NF-kappaB-like transcription factors. 1 A2 A2 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 caspase-3/CPP32 caspase-3/CPP32 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4027 # text = A putative function of BHRF1 in EBV-infected epithelial cells may be to protect virus-infected cells from TNF- and/or anti-Fas- induced cell death in order to maximize virus production. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be VERB VB VerbForm=Inf _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 protect protect VERB VB VerbForm=Inf _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 or or CCONJ CC _ _ _ _ _ 26 anti anti X AFX _ _ _ _ SpaceAfter=No 27 -Fas -Fas ADV RB _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 death death NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 order order NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 maximize maximize VERB VB VerbForm=Inf _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4028 # text = Surprisingly, expression of neither BHRF1 nor Bcl-2 in a B-cell line, BJAB, protected the cells from anti-Fas-mediated apoptosis even though they increased the survival of serum-starved cells. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 neither neither DET DT _ _ _ _ _ 6 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 7 nor nor CCONJ CC _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 BJAB BJAB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 protected protect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 anti-Fas- anti-Fas- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 even even ADV RB _ _ _ _ _ 28 though though SCONJ IN _ _ _ _ _ 29 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 30 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 survival survival NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 starved starve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4029 # text = Thus, the protective role of BHRF1 against apoptosis resembles that of Bcl-2 in being cell type specific and dependent on the apoptotic stimulus. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protective protective ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 BHRF1 BHRF1 NUM CD NumType=Card _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 apoptosis apoptosis ADJ JJ Degree=Pos _ _ _ _ 10 resembles resemble NOUN NNS Number=Plur _ _ _ _ 11 that that ADV WRB PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 being being AUX VBG VerbForm=Ger _ _ _ _ 18 cell cell VERB VB VerbForm=Inf _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 26 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4030 # text = Document 003001285 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001285 003001285 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4031 # text = In vitro suppression of programmed cell death of B cells by tissue inhibitor of metalloproteinases-1. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 suppression suppression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 death death NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4032 # text = Cellular pathways for induction of programmed cell death (PCD) have been identified, but little is known about specific extracellular matrix processes that may affect apoptosis along those pathways. 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 death death NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PCD pCd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 little little ADJ JJ Degree=Pos _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 about about ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 23 matrix matrix NOUN NN Number=Sing _ _ _ _ 24 processes process NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 affect affect VERB VB VerbForm=Inf _ _ _ _ 28 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 along along ADP IN _ _ _ _ _ 30 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4033 # text = In this study, a series of Burkitt's lymphoma (BL) cell lines were assayed for their expression of tissue inhibitor of metalloproteinases (TIMP)-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 series series NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 assayed assay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ _ 23 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4034 # text = Results indicate that TIMP-1-positive BL lines show resistance to cold-shock-induced apoptosis. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 BL Bl NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 cold cold ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4035 # text = Furthermore, recombinant TIMP-1, but not TIMP-2 or a synthetic metalloproteinase inhibitor (BB-94), confers resistance to apoptosis induced by both CD95-dependent and -independent (cold shock, serum deprivation, and gamma-radiation) pathways in TIMP-1-negative BL lines. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 4 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 16 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 BB bb NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 94 94 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 confers confer NOUN NNS Number=Plur _ _ _ _ 25 resistance resistance NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 CD95 Cd95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 independent independent ADJ JJ Degree=Pos _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 cold cold ADJ JJ Degree=Pos _ _ _ _ 39 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 serum serum NOUN NN Number=Sing _ _ _ _ 42 deprivation deprivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 pathways pathway NOUN NNS Number=Plur _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 negative negative ADJ JJ Degree=Pos _ _ _ _ 56 BL Bl NOUN NN Number=Sing _ _ _ _ 57 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4036 # text = TIMP-1 suppression of PCD is not due to metalloproteinase inhibition, as reduction and alkylation of the TIMP-1 did not abolish this activity. 1 TIMP Timp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 suppression suppression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PCD PCD PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 due due ADP IN _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 reduction reduction NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 alkylation alkylation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4037 # text = Retroviral induction of TIMP-1 not only resulted in cell survival but also in continued DNA synthesis for up to 5 d in the absence of serum, while controls underwent apoptosis. 1 Retroviral Retroviral ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 survival survival NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 continued continue ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 up up ADP RP _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ _ 23 d d PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 absence absence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 while while SCONJ IN _ _ _ _ _ 31 controls control NOUN NNS Number=Plur _ _ _ _ 32 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4038 # text = This resistance to apoptosis is reversed by anti-TIMP-1 antibodies, demonstrating that secreted TIMP-1 is active in blocking apoptosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 resistance resistance NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 anti-TIMP anti-TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 blocking block VERB VBG VerbForm=Ger _ _ _ _ 23 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4039 # text = Furthermore, TIMP-1 upregulation induced expression of Bcl-XL but not Bcl-2 as well as decreased NF-kappaB activity as compared with controls. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 XL XL PROPN NNP Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4040 # text = These results demonstrate that TIMP-1 suppresses apoptosis in B cells and suggests a novel activity for TIMP-1 in tissue homeostasis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 24 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4041 # text = Document 003001286 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001286 003001286 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4042 # text = Cooperation between core binding factor and adjacent promoter elements contributes to the tissue-specific expression of interleukin-3. 1 Cooperation cooperation NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 core core NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 contributes contribute NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4043 # text = Tissue-specific expression of interleukin-3 (IL-3) is mediated via cis-acting elements located within 315 base pairs of the transcription start. 1 Tissue Tissue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 18 -acting -act ADJ JJ Degree=Pos _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 315 315 NUM CD NumType=Card _ _ _ _ 23 base base NOUN NN Number=Sing _ _ _ _ 24 pairs pair NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 start start NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4044 # text = This is achieved in part through the positive activities of the AP-1 and Elf-1 sites in the IL-3 promoter. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 part part NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4045 # text = The contribution to T cell-specific expression by other promoter sites was assessed in a transient expression assay with IL-3 promoter constructs linked to a luciferase gene, focusing initially on the core binding factor (CBF) site, which is footprinted in vivo upon T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 contribution contribution NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 constructs construct NOUN NNS Number=Plur _ _ _ _ 26 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 focusing focus VERB VBG VerbForm=Ger _ _ _ _ 33 initially initially ADV RB _ _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 core core NOUN NN Number=Sing _ _ _ _ 37 binding bind VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 CBF CBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 which which PRON WDT PronType=Rel _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 footprinted footprint VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 vivo vivo NOUN NN Number=Sing _ _ _ _ 49 upon upon ADP IN _ _ _ _ _ 50 T t PROPN NNP Number=Sing _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 4046 # text = Activity of the CBF site is shown to be critically dependent on the adjacent activator site Act-1. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CBF CBF PROPN NNP Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 critically critically ADV RB _ _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 Act act NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4047 # text = Together the Act-1 and CBF sites form a functional unit (AC unit) with dual activity. 1 Together together SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Act act NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CBF CBF NOUN NN Number=Sing _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 form form ADP IN Typo=Yes _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 unit unit NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 AC Ac NOUN NN Number=Sing _ _ _ _ 15 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 dual dual ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4048 # text = The AC unit is demonstrated to enhance basal activity of promoters both in fibroblasts and T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AC Ac NOUN NN Number=Sing _ _ _ _ 3 unit unit NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 8 basal basal ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4049 # text = This activity is further inducible in activated T cells, but not in fibroblasts. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4050 # text = In addition to the already identified NIP repressor site, evidence is presented for a second repressor region that restricts promoter activity in fibroblasts. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 already already ADV RB _ _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NIP Nip NOUN NN Number=Sing _ _ _ _ 8 repressor repressor NOUN NN Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 evidence evidence NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 restricts restrict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4051 # text = Finally, a novel positive regulatory element has been mapped in the IL-3 promoter between nucleotide -180 and -210 that leads to increased expression in T cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 positive positive ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 180 180 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 210 210 NUM CD NumType=Card _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 increased increase VERB VB VerbForm=Inf _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4052 # text = Together these results demonstrate that T cell expression of IL-3 is not specified by the activity of a single tissue-specific element, but instead involves multiple interacting elements that provide both specific positive regulation in T cells and specific negative regulation in fibroblasts. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 specified specify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 single single ADJ JJ Degree=Pos _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 instead instead ADV RB _ _ _ _ _ 29 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 31 interacting interacting ADJ JJ Degree=Pos _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 positive positive ADJ JJ Degree=Pos _ _ _ _ 38 regulation regulation NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 specific specific ADJ JJ Degree=Pos _ _ _ _ 44 negative negative ADJ JJ Degree=Pos _ _ _ _ 45 regulation regulation NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4053 # text = Document 003001287 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001287 003001287 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4054 # text = Relief of cyclin 1 Relief relief NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cyclin cyclin NOUN NN Number=Sing _ _ _ _ # sent_id = 4055 # text = A gene transcriptional inhibition during activation of human primary T lymphocytes via CD2 and CD28 adhesion molecules. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 T t NOUN NN Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 CD2 CD2 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CD28 CD28 NUM CD NumType=Card _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4056 # text = Cyclin 1 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ # sent_id = 4057 # text = A transcription is cell cycle regulated and induced by cell proliferative signals. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4058 # text = To understand the mechanisms underlined in this regulation in normal human cells, we have analysed in vivo protein-DNA interactions at the Cyclin A locus in primary T lymphocytes. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 underlined underlin ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vivo vivo NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 interactions interaction NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ 26 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 locus locus NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 primary primary ADJ JJ Degree=Pos _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4059 # text = Stimulation of purified T lymphocytes by a combination of monoclonal antibodies directed at CD2 and CD28 adhesion molecules gives rise to a long lasting proliferation in the absence of accessory cells. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 11 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 12 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 gives give VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 rise rise VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 lasting lasting NOUN NN Number=Sing _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4060 # text = Cyclin 1 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ # sent_id = 4061 # text = A was observed after 4 days of costimulation with anti CD2 + CD28 whereas stimulation by anti CD2 or anti CD28 alone was not effective. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 4 4 NUM CD NumType=Card _ _ _ _ 6 days day NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti anti X AFX _ _ _ _ _ 11 CD2 CD2 NUM CD NumType=Card _ _ _ _ 12 + + SYM SYM _ _ _ _ _ 13 CD28 CD28 NUM CD NumType=Card _ _ _ _ 14 whereas whereas NOUN NNS Number=Plur _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 anti anti X AFX _ _ _ _ _ 18 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 anti anti X AFX _ _ _ _ _ 21 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 22 alone alone ADV RB _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4062 # text = In vivo genomic DMS footprinting revealed upstream of the major transcription initiation sites, the presence of at least three protein binding sites, two of which were constitutively occupied. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 4 DMS Dm NOUN NNS Number=Plur _ _ _ _ 5 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 6 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 three three NUM CD NumType=Card _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 constitutively constitutively ADV RB _ _ _ _ _ 30 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4063 # text = They bind in vitro respectively ATF-1 and NF-Y proteins. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro NOUN NN Number=Sing _ _ _ _ 5 respectively respectively ADV RB _ _ _ _ _ 6 ATF Atf ADV RB _ _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Y y NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4064 # text = The third site was occupied in quiescent cells or in cells stimulated by anti CD2 or anti CD28 alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 anti anti X AFX _ _ _ _ _ 15 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 anti anti X AFX _ _ _ _ _ 18 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 19 alone alone ADV RB _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4065 # text = The mitogenic combination of anti CD2 + anti CD28 released the footprint as cells were committed to proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 3 combination combination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 anti anto X AFX _ _ _ _ _ 6 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 7 + + SYM SYM _ _ _ _ _ 8 anti anti X AFX _ _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 footprint footprint NOUN NN Number=Sing _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 committed commit ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4066 # text = Consistent with theses results, nuclear extracts prepared from quiescent cells formed a specific complex with this element, whereas extracts prepared from cells treated with anti CD2 + anti CD28 failed to do so after cells entered a proliferative state. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 4 s 's PART POS _ _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 anti anti X AFX _ _ _ _ _ 29 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 30 + + SYM SYM _ _ _ _ _ 31 anti anti X AFX _ _ _ _ _ 32 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 33 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 do do VERB VB VerbForm=Inf _ _ _ _ 36 so so ADV RB _ _ _ _ _ 37 after after SCONJ IN _ _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 entered enter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 42 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4067 # text = Document 003001288 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001288 003001288 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4068 # text = A factor known to bind to endogenous 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 bind bind VERB VB VerbForm=Inf _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 endogenous endogenous X ADD _ _ _ _ _ # sent_id = 4069 # text = Ig heavy chain enhancer only in lymphocytes is a ubiquitously active transcription factor. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphocytes lymphocytes NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 ubiquitously ubiquitously ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4070 # text = The transcriptional enhancer located in the first intron of the immunoglobulin heavy chain constant region is a major determinant of B-cell-specific expression of immunoglobulin genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 intron intron NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 constant constant ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 determinant determinant NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4071 # text = Like other enhancers, the Ig heavy chain enhancer contains several short sequence motifs that bind specific transcription factors. 1 Like like ADP IN _ _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ig ig PROPN NNP Number=Sing _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 short short ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4072 # text = Each binding site contributes to the overall activity of the enhancer, however no single element seems absolutely required for activity. 1 Each each DET DT _ _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 contributes contribute NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 overall overall ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 absolutely absolutely ADV RB _ _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4073 # text = For a better understanding of the 1 For for ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 better better ADJ JJR Degree=Cmp _ _ _ _ 4 understanding understanding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ # sent_id = 4074 # text = Ig heavy chain enhancer components, we have cloned and analyzed individual sequence elements. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individual individual ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4075 # text = We find that the factor that binds to the E3 enhancer motif, CATGTGGC, is a ubiquitous transcription factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E3 E3 NOUN NN Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CATGTGGC CATGTGGC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4076 # text = It is present in an active form in both B cells and non-B cells, where it can mediate transcriptional activation in vitro and in vivo. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 non non X AFX _ _ _ _ SpaceAfter=No 14 -B -b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4077 # text = However, despite its ability to activate transcription of a transfected reporter gene, the factor is apparently unable to bind to the endogenous 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 despite despite ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 apparently apparently ADV RB _ _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 bind bind VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 endogenous endogenous NOUN NN Number=Sing _ _ _ _ # sent_id = 4078 # text = Ig heavy chain enhancer in non-lymphoid cells: 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non-lymphoid non-lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ # sent_id = 4079 # text = In previous experiments by others, the characteristic in vivo footprint of this factor, designated NF-muE3, was detected in B cells but not in non-B cells. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 11 footprint footprint NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 muE3 muE3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 non non X AFX _ _ _ _ SpaceAfter=No 30 -B -b ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4080 # text = From this and other findings the picture emerges that there are at least three categories of factors which mediate cell-type-specific transcription in B lymphocytes: (a) cell-specific factors such as Oct-2A and Oct-2B that are not expressed in most other cell types: (b) ubiquitous factors such as NF-kappa 1 From from ADP IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 picture picture NOUN NN Number=Sing _ _ _ _ 8 emerges emerge VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 three three NUM CD NumType=Card _ _ _ _ 15 categories category NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 a a X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 such such ADJ JJ Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2B 2b NOUN NN Number=Sing _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 not not PART RB _ _ _ _ _ 47 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 most most ADJ JJS Degree=Sup _ _ _ _ 50 other other ADJ JJ Degree=Pos _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 : : PUNCT : _ _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 b b X LS _ _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 58 factors factor NOUN NNS Number=Plur _ _ _ _ 59 such such ADJ JJ Degree=Pos _ _ _ _ 60 as as ADP IN _ _ _ _ _ 61 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 4081 # text = B that are constitutively active in B cells but are sequestered in an inactive form in other cells; (c) ubiquitously active factors, exemplified by the one binding to the E3 sequence motif. 1 B b NOUN NN Number=Sing _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 15 form form NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 c c X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 ubiquitously ubiquitously ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 exemplified exemplify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 one one NOUN NN Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 E3 E3 NOUN NN Number=Sing _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4082 # text = This factor is present in an active form in a variety of cell types but is apparently unable to bind to the endogenous 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 form form NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 types type NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 apparently apparently ADV RB _ _ _ _ _ 18 unable unable ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 endogenous endogenous NOUN NN Number=Sing _ _ _ _ # sent_id = 4083 # text = Ig heavy chain enhancer in non-B cells, perhaps due to a non-permissive chromatin structure of the Ig heavy chain locus. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non non X AFX _ _ _ _ SpaceAfter=No 7 -B -b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 perhaps perhaps ADV RB _ _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 non-permissive non-permissive ADJ JJ Degree=Pos _ _ _ _ 15 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Ig ig PROPN NNP Number=Sing _ _ _ _ 20 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4084 # text = Document 003001289 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001289 003001289 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4085 # text = Direct interaction of hematopoietic transcription factors PU.1 and GATA-1: functional antagonism in erythroid cells. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4086 # text = Malignant transformation usually inhibits terminal cell differentiation but the precise mechanisms involved are not understood. 1 Malignant malignant ADJ JJ Degree=Pos _ _ _ _ 2 transformation transformation NOUN NN Number=Sing _ _ _ _ 3 usually usually ADV RB _ _ _ _ _ 4 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 precise precise ADJ JJ Degree=Pos _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 involved involve ADJ JJ Degree=Pos _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4087 # text = PU.1 is a hematopoietic-specific Ets family transcription factor that is required for development of some lymphoid and myeloid lineages. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 Ets et NOUN NNS Number=Plur _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 some some DET DT _ _ _ _ _ 18 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4088 # text = PU.1 can also act as an oncoprotein as activation of its expression in erythroid precursors by proviral insertion or transgenesis causes erythroleukemias in mice. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 act act VERB VB VerbForm=Inf _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 precursors precursor NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 18 insertion insertion NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 transgenesis transgenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 erythroleukemias erythroleukemia NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4089 # text = Restoration of terminal differentiation in the mouse erythroleukemia (MEL) cells requires a decline in the level of PU.1, indicating that PU.1 can block erythroid differentiation. 1 Restoration restoration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mouse mouse NOUN NN Number=Sing _ _ _ _ 8 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 MEL MEL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 decline decline NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 PU.1 PU.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 block block VERB VB VerbForm=Inf _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4090 # text = Here we investigate the mechanism by which PU.1 interferes with erythroid differentiation. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 9 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4091 # text = We find that PU.1 interacts directly with GATA-1, a zinc finger transcription factor required for erythroid differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 5 interacts interact NOUN NNS Number=Plur _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 zinc zinc NOUN NN Number=Sing _ _ _ _ 14 finger finger NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4092 # text = Interaction between PU.1 and GATA-1 requires intact DNA-binding domains in both proteins. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 requires require NOUN NNS Number=Plur _ _ _ _ 9 intact intact NOUN NN Number=Sing _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 domains domain NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4093 # text = PU.1 represses GATA-1-mediated transcriptional activation. 1 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 2 represses represse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4094 # text = Both the DNA binding and transactivation domains of PU.1 are required for repression and both domains are also needed to block terminal differentiation in MEL cells. 1 Both both CCONJ CC _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 domains domain NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 repression repression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 domains domain NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 needed need VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 block block VERB VB VerbForm=Inf _ _ _ _ 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 MEL Mel ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4095 # text = We also show that ectopic expression of PU.1 in Xenopus embryos is sufficient to block erythropoiesis during normal development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Xenopus Xenopus PROPN NNP Number=Sing _ _ _ _ 11 embryos embryo NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 block block VERB VB VerbForm=Inf _ _ _ _ 16 erythropoiesis erythropoiesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4096 # text = Furthermore, introduction of exogenous GATA-1 in both MEL cells and Xenopus embryos and explants relieves the block to erythroid differentiation imposed by PU.1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 introduction introduction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 6 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 MEL Mel ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Xenopus Xenopus ADJ JJ Degree=Pos _ _ _ _ 14 embryos embryo NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 explants explant NOUN NNS Number=Plur _ _ _ _ 17 relieves relieve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 block block NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 erythroid erythroid VERB VB VerbForm=Inf _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 imposed impose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4097 # text = Our results indicate that the stoichiometry of directly interacting but opposing transcription factors may be a crucial determinant governing processes of normal differentiation and malignant transformation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 stoichiometry stoichiometry NOUN NN Number=Sing _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 opposing oppos VERB VBG VerbForm=Ger _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 18 determinant determinant NOUN NN Number=Sing _ _ _ _ 19 governing govern VERB VBG VerbForm=Ger _ _ _ _ 20 processes processe NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 26 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4098 # text = Document 003001290 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001290 003001290 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4099 # text = Signal transduction pathways activated in endothelial cells following infection with Chlamydia pneumoniae. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Chlamydia Chlamydia PROPN NNP Number=Sing _ _ _ _ 12 pneumoniae pneumonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4100 # text = Chlamydia pneumoniae is an important respiratory pathogen. 1 Chlamydia Chlamydia PROPN NNP Number=Sing _ _ _ _ 2 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 7 pathogen pathogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 4101 # text = Recently, its presence has been demonstrated in atherosclerotic lesions. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 11 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4102 # text = In this study, we characterized C. pneumoniae-mediated activation of endothelial cells and demonstrated an enhanced expression of endothelial adhesion molecules followed by subsequent rolling, adhesion, and transmigration of leukocytes (monocytes, granulocytes). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 C. c. PROPN NNP Number=Sing _ _ _ _ 8 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 27 rolling rolling NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 transmigration transmigration NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4103 # text = These effects were blocked by mAbs against endothelial and/or leukocyte adhesion molecules (beta1 and beta2 integrins). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 7 against against ADP IN _ _ _ _ _ 8 endothelial endothelial NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 or or CCONJ CC _ _ _ _ _ 12 leukocyte leukocyte VERB VB VerbForm=Inf _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 beta1 beta1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 beta2 beta2 NUM CD NumType=Card _ _ _ _ 19 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4104 # text = Additionally, activation of different signal transduction pathways in C. pneumoniae-infected endothelial cells was shown: protein tyrosine phosphorylation, up-regulation of phosphorylated p42/p44 mitogen-activated protein kinase, and NF-kappaB activation/translocation occurred within 10-15 min. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 signal signal NOUN NN Number=Sing _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 pathways pathway NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 C. c. PROPN NNP Number=Sing _ _ _ _ 11 pneumoniae pneumonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 up up ADP IN _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 p42 p42 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 p44 p44 NUM CD NumType=Card _ _ _ _ 31 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 -activated -activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 / / PUNCT , _ _ _ _ SpaceAfter=No 42 translocation translocation NOUN NN Number=Sing _ _ _ _ 43 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 within within ADP IN _ _ _ _ _ 45 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 15 15 NUM CD NumType=Card _ _ _ _ 48 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4105 # text = Increased mRNA and surface expression of E-selectin, ICAM-1, and VCAM-1 were noted within hours. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4106 # text = Thus, C. pneumoniae triggers a cascade of events that could lead to endothelial activation, inflammation, and thrombosis, which in turn may result in or may promote atherosclerosis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 C. c. PROPN NNP Number=Sing _ _ _ _ 4 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ _ 5 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cascade cascade NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 lead lead VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 thrombosis thrombosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 turn turn NOUN NN Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 result result VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 promote promote VERB VB VerbForm=Inf _ _ _ _ 31 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4107 # text = Document 003001291 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001291 003001291 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4108 # text = A functional T-cell receptor signaling pathway is required for p95vav activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4109 # text = Stimulation of the T-cell antigen receptor (TCR) induces activation of multiple tyrosine kinases, resulting in phosphorylation of numerous intracellular substrates. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 resulting result VERB VBG VerbForm=Ger _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4110 # text = One substrate is p95vav, which is expressed exclusively in hematopoietic and trophoblast cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 substrate substrate NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 exclusively exclusively ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 trophoblast trophoblast ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4111 # text = It contains a number of structural motifs, including Src homology 2, Src homology 3, and pleckstrin homology domains and a putative guanine nucleotide exchange domain. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 number number NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 Src Src PROPN NNP Number=Sing _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Src Src PROPN NNP Number=Sing _ _ _ _ 15 homology homology NOUN NN Number=Sing _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 pleckstrin pleckstrin ADJ JJ Degree=Pos _ _ _ _ 20 homology homology NOUN NN Number=Sing _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 putative putative ADJ JJ Degree=Pos _ _ _ _ 25 guanine guanine NOUN NN Number=Sing _ _ _ _ 26 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 27 exchange exchange NOUN NN Number=Sing _ _ _ _ 28 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4112 # text = The role of p95vav in TCR-mediated signaling processes is unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 processes process NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4113 # text = Here, we show that overexpression of p95vav alone in Jurkat T cells leads to activation of the nuclear factors, including NFAT, involved in interleukin-2 expression. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 9 alone alone ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4114 # text = Furthermore, p95vav synergizes with TCR stimulation in inducing NFAT- and interleukin-2-dependent transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p95vav p95vave VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 synergizes synergize NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TCR Tcr NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4115 # text = In contrast, NFAT activation by a G-protein-coupled receptor is not modulated by p95vav overexpression, suggesting that the effect is specific to the TCR signaling pathways. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 10 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 17 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4116 # text = Although removal of the first 67 amino acids of p95vav activates its transforming potential in NIH 3T3 cells, this region appears to be required for its function in T cells. 1 Although although SCONJ IN _ _ _ _ _ 2 removal removal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 67 67 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acids acid NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 11 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 14 potential potential NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 NIH Nih PROPN NNP Number=Sing _ _ _ _ 17 3T3 3T3 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4117 # text = We further demonstrate that the p95vav-induced NFAT activation is not mimicked by Ras activation, though its function is dependent upon Ras and Raf. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p95vav p95vave NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Ras Ras PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 though though SCONJ IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 Ras Ras PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4118 # text = Furthermore, the activating function of p95vav is blocked by FK506, suggesting that its activity also depends on calcineurin. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activating activate VERB VBG VerbForm=Ger _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p95vav p95vav NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4119 # text = To further dissect p95vav involvement in TCR signaling, we analyzed various Jurkat mutants deficient in TCR signaling function or TCR expression and showed that an intact TCR signaling pathway is required for p95vav to function. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 dissect dissect NOUN NN Number=Sing _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 mutants mutant NOUN NNS Number=Plur _ _ _ _ 15 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 intact intact NOUN NN Number=Sing _ _ _ _ 28 TCR Tcr NOUN NN Number=Sing _ _ _ _ 29 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 function function VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4120 # text = However, overexpression of p95vav does not appear to influence TCR-induced protein tyrosine phosphorylation or increases in cytoplasmic free calcium. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p95vav p95vav NOUN NN Number=Sing _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 appear appear VERB VB VerbForm=Inf _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 influence influence VERB VB VerbForm=Inf _ _ _ _ 11 TCR Tcr ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 increases increase NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 21 free free ADJ JJ Degree=Pos _ _ _ _ 22 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4121 # text = Taken together, our data suggest that p95vav plays an important role at an yet unidentified proximal position in the TCR signaling cascade. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 yet yet ADV RB _ _ _ _ _ 16 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 position position NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ _ 23 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4122 # text = Document 003001292 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001292 003001292 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4123 # text = Separation of oxidant-initiated and redox-regulated steps in the NF-kappa B signal transduction pathway. 1 Separation separation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 redox redox VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 steps step NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4124 # text = Studies presented here show that overall NF-kappa B signal transduction begins with a parallel series of stimuli-specific pathways through which cytokines (tumor necrosis factor alpha), oxidants (hydrogen peroxide and mitomycin C), and phorbol ester (phorbol 12-myristate 13-acetate) individually initiate signaling. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 overall overall ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 begins begin VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 17 series series NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stimuli-specific stimuli-specific ADJ JJ Degree=Pos _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 34 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 mitomycin mitomycin NOUN NN Number=Sing _ _ _ _ 37 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 42 ester ester NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 45 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT : _ _ _ _ SpaceAfter=No 47 myristate myristate NOUN NN Number=Sing _ _ _ _ 48 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT : _ _ _ _ SpaceAfter=No 50 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 individually individually ADV RB _ _ _ _ _ 53 initiate initiate ADJ JJ Degree=Pos _ _ _ _ 54 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4125 # text = These initial pathways culminate in a common pathway through which all of the stimulating agents ultimately signal NF-kappa B activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 initial initial ADJ JJ Degree=Pos _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 culminate culminate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 common common ADJ JJ Degree=Pos _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 agents agent NOUN NNS Number=Plur _ _ _ _ 16 ultimately ultimately ADV RB _ _ _ _ _ 17 signal signal VERB VB VerbForm=Inf _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4126 # text = We distinguish the stimuli-specific pathways by showing that the oxidative stimuli trigger NF-kappa B activation in only one of two human T-cell lines (Wurzburg but not Jurkat), whereas tumor necrosis factor alpha and phorbol 12-myristate 13-acetate readily stimulate in both lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 distinguish distinguish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 stimuli-specific stimuli-specific ADJ JJ Degree=Pos _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 showing show VERB VBG VerbForm=Ger _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 12 trigger trigger NOUN NN Number=Sing _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not ADV RB _ _ _ _ _ 31 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 whereas whereas SCONJ IN _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 41 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT : _ _ _ _ SpaceAfter=No 43 myristate myristate NOUN NN Number=Sing _ _ _ _ 44 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 acetate acetate NOUN NN Number=Sing _ _ _ _ 47 readily readily ADV RB _ _ _ _ _ 48 stimulate stimulate ADV RB Degree=Pos _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 both both DET DT _ _ _ _ _ 51 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4127 # text = We propose the common pathway as the simplest way of accounting for the common requirements and properties of the signaling pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 common common ADJ JJ Degree=Pos _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 simplest simplest ADJ JJS Degree=Sup _ _ _ _ 9 way way NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 accounting accounte NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 common common ADJ JJ Degree=Pos _ _ _ _ 15 requirements requirement NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 properties property NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 signaling signal NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4128 # text = We include a redox-regulatory mechanism(s) in this common pathway to account for the previously demonstrated redox regulation of NF-kappa B activation in Jurkat cells (in which oxidants don't activate NF-kappa B); we put tyrosine phosphorylation in the common pathway by showing that kinase activity (inhibitable by herbimycin A and tyrphostin 47) is required for NF-kappa B activation by all stimuli tested in both cell lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 redox redox NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s s X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 common common ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 account account VERB VB VerbForm=Inf _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 previously previously ADV RB _ _ _ _ _ 20 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 redox redox NOUN NN Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 in in ADP IN _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 36 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 37 n't not PART RB _ _ _ _ _ 38 activate activate VERB VB VerbForm=Inf _ _ _ _ 39 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 ; ; PUNCT , _ _ _ _ _ 45 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 46 put put VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 48 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 common common ADJ JJ Degree=Pos _ _ _ _ 52 pathway pathway NOUN NN Number=Sing _ _ _ _ 53 by by SCONJ IN _ _ _ _ _ 54 showing show VERB VBG VerbForm=Ger _ _ _ _ 55 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 activity activity NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 62 A a NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 tyrphostin tyrphostin NOUN NN Number=Sing _ _ _ _ 65 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 ) ) PUNCT -RRB- _ _ _ _ _ 67 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 68 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 69 for for ADP IN _ _ _ _ _ 70 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 - - PUNCT , _ _ _ _ SpaceAfter=No 72 kappa kappa NOUN NN Number=Sing _ _ _ _ 73 B b NOUN NN Number=Sing _ _ _ _ 74 activation activation NOUN NN Number=Sing _ _ _ _ 75 by by ADP IN _ _ _ _ _ 76 all all DET DT _ _ _ _ _ 77 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 78 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 79 in in ADP IN _ _ _ _ _ 80 both both DET DT _ _ _ _ _ 81 cell cell NOUN NN Number=Sing _ _ _ _ 82 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 4129 # text = Since internal sites of oxidant production have been shown to play a key role in the cytokine-stimulated activation of NF-kappa B, and since tyrosine kinase and phosphatase activities are known to be altered by oxidants, these findings suggest that intracellular redox status controls NF-kappa B activation by regulating tyrosine phosphorylation event(s) within the common step of the NF-kappa B signal transduction pathway. 1 Since since ADP IN _ _ _ _ _ 2 internal internal ADJ JJ Degree=Pos _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 key key ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 since since SCONJ IN _ _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 33 activities activity NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 oxidants oxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 findings finding NOUN NNS Number=Plur _ _ _ _ 44 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 that that SCONJ IN _ _ _ _ _ 46 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 47 redox redox NOUN NN Number=Sing _ _ _ _ 48 status status NOUN NN Number=Sing _ _ _ _ 49 controls controls NOUN NN Number=Sing _ _ _ _ 50 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa NOUN NN Number=Sing _ _ _ _ 53 B b NOUN NN Number=Sing _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ _ 55 by by SCONJ IN _ _ _ _ _ 56 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 57 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 58 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 59 event event NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 s s X AFX _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 within within ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 common common ADJ JJ Degree=Pos _ _ _ _ 66 step step NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 kappa kappa NOUN NN Number=Sing _ _ _ _ 72 B b NOUN NN Number=Sing _ _ _ _ 73 signal signal NOUN NN Number=Sing _ _ _ _ 74 transduction transduction NOUN NN Number=Sing _ _ _ _ 75 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4130 # text = Document 003001293 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001293 003001293 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4131 # text = CD30 ligation induces nuclear factor-kappa B activation in human T cell lines. 1 CD30 CD30 NUM CD NumType=Card _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4132 # text = CD30 is a recently described member of the tumor necrosis factor/nerve growth factor receptor superfamily. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 member member NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 nerve nerve NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4133 # text = In this report, we show that following incubation of L540 cells (Hodgkin's disease-derived, T cell-like, CD30+ cells) with the agonistic anti-CD30 monoclonal antibodies (mAb) M44 and M67, two nuclear factor (NF)-kappa B DNA binding activities were induced in nuclear extracts, as determined in gel retardation assays. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 incubation incubation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 L540 L540 PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 like like INTJ UH _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 32 anti-CD30 anti-CD30 NUM CD NumType=Card _ _ _ _ 33 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 34 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 M44 m44 NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 M67 M67 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 two two NUM CD NumType=Card _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa NOUN NN Number=Sing _ _ _ _ 50 B b NOUN NN Number=Sing _ _ _ _ 51 DNA dna NOUN NN Number=Sing _ _ _ _ 52 binding binding VERB VBG VerbForm=Ger _ _ _ _ 53 activities activity NOUN NNS Number=Plur _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 58 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 as as SCONJ IN _ _ _ _ _ 61 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 gel gel NOUN NN Number=Sing _ _ _ _ 64 retardation retardation NOUN NN Number=Sing _ _ _ _ 65 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 4134 # text = The effect of the mAb towards NF-kappa B activation was rapid, as it occurred within 20 min, and was sustained for up to 6 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mAb mAb PROPN NNP Number=Sing _ _ _ _ 6 towards towards ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 20 20 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 up up ADV RB _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 6 6 NUM CD NumType=Card _ _ _ _ 29 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4135 # text = By comparison, an isotype-matched antibody had no effect on NF-kappa B activation. 1 By by ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 isotype-matched isotype-matched ADJ JJ Degree=Pos _ _ _ _ 6 antibody antibody NOUN NN Number=Sing _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4136 # text = Moreover, in human T helper (Th) clones functionally characterized as being of the type 0, type 1 and type 2 (28%, < 1% und 93% CD30+, respectively), the extent of CD30-mediated NF-kappa B activation correlated with the proportion of CD30+ cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 helper helper NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Th th NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 clones clone NOUN NNS Number=Plur _ _ _ _ 11 functionally functionally ADV RB _ _ _ _ _ 12 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 being be AUX VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 type type NOUN NN Number=Sing _ _ _ _ 24 2 2 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 28 28 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 < < PUNCT -LRB- _ _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 und und ADJ JJ Degree=Pos _ _ _ _ 33 93 93 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 % % SYM NN Number=Sing _ _ _ _ 35 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 extent extent NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa NOUN NN Number=Sing _ _ _ _ 50 B b NOUN NN Number=Sing _ _ _ _ 51 activation activation NOUN NN Number=Sing _ _ _ _ 52 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 proportion proportion NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 + + SYM SYM _ _ _ _ _ 59 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 4137 # text = In all cell lines investigated, the NF-kappa B complexes induced following CD30 engagement were shown to contain p50 NF-kappa B1, p65 RelA, and possibly other transcription factors. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 CD30 CD30 NUM CD NumType=Card _ _ _ _ 16 engagement engagement NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 contain contain VERB VB VerbForm=Inf _ _ _ _ 21 p50 p50 NUM CD NumType=Card _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B1 b1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 possibly possibly ADV RB _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4138 # text = Collectively, our results demonstrate that nuclear translocation and activation of NF-kappa B rank among the short-term cellular responses elicited following CD30 ligation. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 rank rank NOUN NN Number=Sing _ _ _ _ 17 among among ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 term term NOUN NN Number=Sing _ _ _ _ 22 cellular cellular NOUN NN Number=Sing _ _ _ _ 23 responses response NOUN NNS Number=Plur _ _ _ _ 24 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 CD30 CD30 NUM CD NumType=Card _ _ _ _ 27 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4139 # text = Document 003001294 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001294 003001294 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4140 # text = Downregulation of Wilms' tumor gene (WT1) is not a prerequisite for erythroid or megakaryocytic differentiation of the leukemic cell line K562. 1 Downregulation Downregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Wilms Wilm PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 4 ' 's PART POS _ _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 WT1 WT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 K562 k562 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4141 # text = The Wilms' tumor gene (WT1) encodes a transcription factor of the zinc finger type. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Wilms Wilm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ' 's PART POS _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 WT1 wt1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 zinc zinc NOUN NN Number=Sing _ _ _ _ 16 finger finger NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4142 # text = A high expression of WT1 has been detected in a range of acute leukemias, and WT1 is downregulated during induced differentiation of some leukemic cell lines. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 range range NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 acute acute ADJ JJ Degree=Pos _ _ _ _ 14 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 some some DET DT _ _ _ _ _ 25 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4143 # text = Overexpression of WT1 in some myeloid cell lines confers resistance to differentiation induction. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 WT1 wt1 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 some some DET DT _ _ _ _ _ 6 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 confers confer NOUN NNS Number=Plur _ _ _ _ 10 resistance resistance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4144 # text = These observations suggest that a high WT1 expression in hematopoietic cells is incompatible with differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 WT1 wt1 NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 incompatible incompatible ADJ JJ Degree=Pos _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4145 # text = In this study, each of the four different isoforms of WT1 was constitutively overexpressed in the leukemic cell line K562. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 each each DET DT _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 constitutively constitutively ADV RB _ _ _ _ _ 15 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 K562 K562 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4146 # text = K562 cells express endogenous WT1, which is downregulated as a response to induced differentiation along the erythroid and megakaryocytic pathways. 1 K562 K562 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 5 WT1 wt1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4147 # text = We now demonstrate that a forced exogenous expression of the four different isoforms of WT1 in K562 does not affect the differentiation response, as judged by accumulation of hemoglobin in response to hemin or the expression of megakaryocytic cell surface markers in response to 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 forced force VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 four four NUM CD NumType=Card _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 K562 K562 NUM CD NumType=Card _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 hemin hemin VERB VB VerbForm=Inf _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 surface surface NOUN NN Number=Sing _ _ _ _ 42 markers marker NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 response response NOUN NN Number=Sing _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 12-O- 12-O- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4148 # text = We conclude that downregulation of WT1 during induced differentiation of K562 cells is not a prerequisite for erythroid or megakaryocytic differentiation of these cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 WT1 WT1 NUM CD NumType=Card _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 K562 K562 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4149 # text = Document 003001295 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001295 003001295 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4150 # text = A T cell-specific enhancer in the interleukin-3 locus is activated cooperatively by Oct and NFAT elements within a DNase I-hypersensitive site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 locus locus NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 cooperatively cooperatively ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 DNase DNase NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4151 # text = Interleukin-3 (IL-3) is a cytokine that is expressed primarily in activated T cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 primarily primarily ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4152 # text = Here we identified an inducible T cell-specific enhancer 14 kb upstream of the IL-3 gene that responded to activation of T cell receptor signaling pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 14 14 NUM CD NumType=Card _ _ _ _ 12 kb kb NOUN NN Number=Sing _ _ _ _ 13 upstream upstream NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4153 # text = The IL-3 enhancer spanned an inducible cyclosporin A-sensitive DNase I-hypersensitive site found only in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 spanned span VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 10 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 DNase DNase NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4154 # text = Four NFAT-like elements exist within the enhancer. 1 Four Four PROPN NNP Number=Sing _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 like like SCONJ IN _ _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 exist exist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4155 # text = The two most active NFAT-like elements were located at the center of the DNase I-hypersensitive site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 most most ADV RBS _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 like like SCONJ IN _ _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 center center NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNase DNase NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4156 # text = One of these NFAT-like elements encompassed overlapping Oct- and NFATp/c-binding sites, which functioned in a highly synergistic manner. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 like like SCONJ IN _ _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 encompassed encompass VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NFATp/c NFATp/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -binding -binding VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 functioned function VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 highly highly ADV RB _ _ _ _ _ 22 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4157 # text = We suggest that the T cell-specific expression of the IL-3 gene is partly controlled through the enhancer by cooperation between Oct and NFAT family proteins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 partly partly ADV RB _ _ _ _ _ 18 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4158 # text = Document 003001296 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001296 003001296 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4159 # text = Interleukin-10 stabilizes inhibitory kappaB-alpha in human monocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 stabilizes stabilize NOUN NNS Number=Plur _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha X FW Foreign=Yes _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4160 # text = Interleukin-10 (IL-10) protects animals from lethal endotoxemia. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -10 -10 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 animals animal NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 lethal lethal ADJ JJ Degree=Pos _ _ _ _ 12 endotoxemia endotoxemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4161 # text = This beneficial effect is mediated, in part, by inhibition of inflammatory cytokine production, including tumor necrosis factor-alpha (TNF-alpha). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4162 # text = Evidence suggests that IL-10 may inhibit activation of the transcription factor nuclear factor-kappaB (NF-kappaB) through an unknown mechanism. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -kappaB -kappaB NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4163 # text = NF-kappaB activation in response to inflammatory signals is dependent upon degradation of its associated inhibitory peptide, inhibitory kappaB-alpha (IkappaB-alpha). 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 18 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 21 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IkappaB- Ikappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4164 # text = We hypothesized that IL-10 prevents human monocyte NF-kappaB activation and resultant TNF-alpha production by stabilization of IkappaB-alpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 prevents prevent NOUN NNS Number=Plur _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 resultant resultant NOUN NN Number=Sing _ _ _ _ 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IkappaB- Ikappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4165 # text = The purpose of this study was to determine the effect of IL-10 on lipopolysaccharide (LPS)-induced human monocyte TNF-alpha production, NF-kappaB activation, and IkappaB-alpha degradation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 determine determine VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4166 # text = Monocytes were isolated from human donors. 1 Monocytes Monocyte NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 4167 # text = Cells were stimulated with endotoxin (LPS, 100 ng/mL) with and without human IL-10 (10 ng/mL). 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 100 100 NUM CD NumType=Card _ _ _ _ 10 ng/ ng/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 11 mL mL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 IL-10 IL-10 NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ _ 20 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 mL mL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4168 # text = Following stimulation, TNF-alpha was measured in cell supernatants by ELISA, NF-kappaB activity by electrophoretic mobility shift assay, and IkappaB-alpha levels by Western blot. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 21 mobility mobility NOUN NN Number=Sing _ _ _ _ 22 shift shift NOUN NN Number=Sing _ _ _ _ 23 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 Western western ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4169 # text = We observed that after LPS stimulation of human monocytes, TNF-alpha increased to 798+/-67 pg/mL (p < .001 versus control). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha PROPN NNP Number=Sing _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 798+/-67 798+/-67 NUM CD NumType=Card _ _ _ _ 17 pg/mL pg/mL NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p p NOUN NN Number=Sing _ _ _ _ 20 < < PUNCT -LRB- _ _ _ _ _ 21 .001 .001 NUM CD NumType=Card _ _ _ _ 22 versus versus ADJ JJ Degree=Pos _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4170 # text = IL-10 attenuated LPS-stimulated TNF-alpha production (297+/-54; p < .001 versus LPS alone). 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 297+/-54 297+/-54 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 p p NOUN NN Number=Sing _ _ _ _ 16 < < PUNCT -LRB- _ _ _ _ _ 17 .001 .001 NUM CD NumType=Card _ _ _ _ 18 versus versus ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ _ 20 alone alone ADV RB _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4171 # text = After LPS stimulation in human monocytes, IkappaB-alpha protein levels decreased, and NF-kappaB DNA binding increased. 1 After after ADP IN _ _ _ _ _ 2 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4172 # text = IL-10 pretreatment prevented LPS-induced decreases in IkappaB-alpha protein levels and attenuated NF-kappaB DNA binding. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 5 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 decreases decrease NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4173 # text = IL-10 appears to prevent activation of NF-kappaB by preserving IkappaB-alpha protein levels, leading to a reduction in TNF-alpha release. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 preserving preserve VERB VBG VerbForm=Ger _ _ _ _ 14 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 reduction reduction NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 alpha alpha ADP IN _ _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4174 # text = Document 003001297 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001297 003001297 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4175 # text = Human alveolar macrophages are markedly deficient in REF-1 and AP-1 DNA binding activity. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 3 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 markedly markedly ADV RB _ _ _ _ _ 6 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4176 # text = Although many functions of human alveolar macrophages are altered compared with their precursor cell, the blood monocyte (monocyte), the reason(s) for these functional changes have not been determined. 1 Although although SCONJ IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 functions function NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 precursor precursor NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 reason reason NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 s s X AFX _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 functional functional ADJ JJ Degree=Pos _ _ _ _ 31 changes change NOUN NNS Number=Plur _ _ _ _ 32 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 determined determin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4177 # text = We recently reported that human alveolar macrophages do not express AP-1 DNA binding activity (Monick, M. M., Carter, A. B., Gudmundsson, G., Geist, L. J., and Hunninghake, G. W. (1998) 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 express express VERB VB VerbForm=Inf _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Monick Monick PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 M. M. PROPN NNP Number=Sing _ _ _ _ 21 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Carter Carter PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 A. A. PROPN NNP Number=Sing _ _ _ _ 26 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Gudmundsson Gudmundsson PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 G. G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 Geist Geist PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 L. L. PROPN NNP Number=Sing _ _ _ _ 35 J. J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 Hunninghake Hunninghake PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 G. G. PROPN NNP Number=Sing _ _ _ _ 41 W. W. PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 1998 1998 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 4178 # text = Am. 1 Am be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 4179 # text = J. Physiol. 275, L389-L397). 1 J. J. PROPN NNP Number=Sing _ _ _ _ 2 Physiol Physiol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ 4 275 275 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 L389- l389- SYM SYM _ _ _ _ SpaceAfter=No 7 L397 L397 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4180 # text = To determine why alveolar macrophages do not express AP-1 DNA binding activity, we first showed that there was not a decrease in expression of the FOS and JUN proteins that make up the AP-1 complex. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 why why ADV WRB PronType=Int _ _ _ _ 4 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 5 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 6 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 express express VERB VB VerbForm=Inf _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 first first ADV RB _ _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 there there PRON EX _ _ _ _ _ 21 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 decrease decrease NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 FOS Fo NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 JUN Jun ADJ JJ Degree=Pos _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 up up ADP RP _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4181 # text = There was, however, a significant difference in the amounts of the nuclear protein, REF-1 (which regulates AP-1 DNA binding by altering the redox status of FOS and JUN proteins), in alveolar macrophages compared with monocytes. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 significant significant ADJ JJ Degree=Pos _ _ _ _ 8 difference difference NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 which which PRON WDT PronType=Rel _ _ _ _ 22 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 by by SCONJ IN _ _ _ _ _ 29 altering alter VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 redox redox NOUN NN Number=Sing _ _ _ _ 32 status status NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 FOS FOS PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 JUN JUN PROPN NNP Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 42 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 43 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4182 # text = In addition, in vitro differentiation of monocytes to a macrophage-like cell resulted in decreased amounts of REF-1. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 amounts amount NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4183 # text = Finally, addition of REF-1 from activated monocytes to alveolar macrophage nuclear proteins resulted in a marked increase in AP-1 DNA binding. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 alveolar alveolar VERB VB VerbForm=Inf _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 increase increase NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4184 # text = These studies strongly suggest that the process of differentiation of monocytes into alveolar macrophages is associated with a loss of REF-1 and AP-1 activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 process process NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 loss loss NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4185 # text = This observation may explain, in part, some of the functional differences observed for alveolar macrophages compared with monocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 explain explain VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4186 # text = Document 003001298 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001298 003001298 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4187 # text = Induction of immediate early response genes by macrophage colony-stimulating factor in normal human monocytes. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4188 # text = A group of coordinately induced protooncogenes, cytoskeletal, and extracellular matrix genes have been termed immediate early response genes, and their induction has been associated with growth factor-stimulated cell proliferation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 group group NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 coordinately coordinately ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 cytoskeletal cytoskeletal NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 12 matrix matrix NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 18 early early ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4189 # text = We have investigated the induction of these genes by macrophage-CSF (M-CSF) in human monocytes that do not proliferate in response to M-CSF but require the factor for optimal cell differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 CSF CSF NOUN NN Number=Sing _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4190 # text = Normal human monocytes were isolated, carefully washed, and incubated for 36 to 48 h in fetal bovine serum-containing medium. 1 Normal normal ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 carefully carefully ADV RB _ _ _ _ _ 8 washed wash VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 36 36 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 48 48 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 19 bovine bovine NOUN NN Number=Sing _ _ _ _ 20 serum- serum- PUNCT , _ _ _ _ SpaceAfter=No 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4191 # text = At the end of this incubation the resting cells were stimulated with M-CSF, and RNA was isolated for analysis by Northern blotting. 1 At at ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 end end NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 incubation incubation NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 resting resting ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 RNA RNA PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 analysis analysis NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 Northern northern ADJ JJ Degree=Pos _ _ _ _ 25 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4192 # text = RNA from control resting cells contained low to undetectable levels of c-jun, fibronectin receptor, and actin mRNA. 1 RNA RNa ADP IN _ _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 control control NOUN NN Number=Sing _ _ _ _ 4 resting reste VERB VBG VerbForm=Ger _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 low low ADV RB Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 actin actin PROPN NNP Number=Sing _ _ _ _ 20 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4193 # text = Within 15 to 30 min of addition of M-CSF, however, there was a dramatic coordinate induction of these genes. 1 Within within ADP IN _ _ _ _ _ 2 15 15 NUM CD NumType=Card _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 30 30 NUM CD NumType=Card _ _ _ _ 5 min min NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 there there PRON EX _ _ _ _ _ 16 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 19 coordinate coordinate NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4194 # text = The c-jun gene expression was very transient and was not detectable by 60 min after M-CSF addition. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 jun jun NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 60 60 NUM CD NumType=Card _ _ _ _ 15 min min NOUN NNS Number=Plur _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 CSF CSF NOUN NN Number=Sing _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4195 # text = In contrast, the expression of actin and fibronectin receptor mRNA was more sustained, and the expression of these genes remained elevated at 24 to 48 h after M-CSF addition. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 actin actin NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 more more ADV RBR _ _ _ _ _ 14 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 24 24 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 48 48 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 CSF CSF NOUN NN Number=Sing _ _ _ _ 32 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4196 # text = We also observed the induction of the myelomonocytic specific tyrosine kinase hck gene simultaneously with the other immediate early response genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 hck hck NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 simultaneously simultaneously ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4197 # text = The protein synthesis inhibitor cycloheximide did not block the induction of any of these genes, and in fact, super-induced the expression of c-jun and hck. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 5 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 block block VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 any any DET DT _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 super super ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 hck hck NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4198 # text = Nuclear run on transcription of the c-jun, hck, and actin genes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 hck hck NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 actin actin ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4199 # text = Therefore, in normal human monocytes M-CSF induces immediate early response genes without inducing cell proliferation. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF Csf NOUN NN Number=Sing _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 without without SCONJ IN _ _ _ _ _ 16 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4200 # text = These genes may then play a role in altering the physiologic status of the cells in response to CSF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 altering alter VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 12 status status NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4201 # text = Document 003001299 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001299 003001299 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4202 # text = Cloning of the novel human myeloid-cell-specific C/EBP-epsilon transcription factor. 1 Cloning Cloning NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 myeloid-cell myeloid-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4203 # text = Chicken NF-M transcription factor, in cooperation with either c-Myb or v-Myb, is active in the combinatorial activation of myeloid-cell-specific genes in heterologous cell types, such as embryonic fibroblasts. 1 Chicken Chicken PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 M M NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Myb Myb NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Myb Myb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 myeloid-cell myeloid-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 such such ADJ JJ Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 38 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4204 # text = In humans, similar effects were observed with homologous members of the CCAAT/enhancer-binding protein (C/EBP) family of transcriptional regulators, especially the human homolog of chicken NF-M, C/EBP-beta (NF-IL6). 1 In in ADP IN _ _ _ _ _ 2 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 especially especially ADV RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 homolog homolog NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 chicken chicken NOUN NN Number=Sing _ _ _ _ 34 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 C/EBP- C/EBP- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 beta beta NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 IL6 IL6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4205 # text = However, the NF-IL6 gene is expressed in a variety of nonmyeloid cell types and is strongly inducible in response to inflammatory stimuli, making it an unlikely candidate to have an exclusive role as a combinatorial differentiation switch during myelopoiesis in human cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nonmyeloid nonmyeloid ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 strongly strongly ADV RB _ _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 making make VERB VBG VerbForm=Ger _ _ _ _ 28 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 unlikely unlikely ADJ JJ Degree=Pos _ _ _ _ 31 candidate candidate NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 have have VERB VB VerbForm=Inf _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 40 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 41 switch switch NOUN NN Number=Sing _ _ _ _ 42 during during ADP IN _ _ _ _ _ 43 myelopoiesis myelopoiesis NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4206 # text = By using a reverse transcription-PCR-based approach and a set of primers specific for the DNA-binding domains of highly homologous members of the C/EBP family of transcriptional regulators, we have cloned a novel human gene encoding a member of the C/EBP gene family, identified as the human homolog of CRP1, C/EBP-epsilon. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 approach approach NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 set set NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 primers primer NOUN NNS Number=Plur _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 highly highly ADV RB _ _ _ _ _ 25 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 EBP EBP PROPN NNP Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 novel novel NOUN NN Number=Sing _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 member member NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 / / PUNCT , _ _ _ _ SpaceAfter=No 51 EBP EBP PROPN NNP Number=Sing _ _ _ _ 52 gene gene ADJ JJ Degree=Pos _ _ _ _ 53 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 as as ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 human human ADJ JJ Degree=Pos _ _ _ _ 59 homolog homolog NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 CRP1 CRP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 65 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 epsilon epsilon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 4207 # text = A 1.2-kb cDNA encoding full-length human C/EBP-epsilon was cloned from a promyelocyte-late myeloblast-derived lambda gt11 library. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 1.2 1.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 length length NOUN NN Number=Sing _ _ _ _ 10 human human NOUN NN Number=Sing _ _ _ _ 11 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 EBP- EBP- SYM NFP _ _ _ _ SpaceAfter=No 14 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 myeloblast myeloblast NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 lambda lambda NOUN NN Number=Sing _ _ _ _ 26 gt11 gt11 NUM CD NumType=Card _ _ _ _ 27 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4208 # text = Molecular analysis of the cDNA and genomic clones indicated the presence of two exons encoding a protein with an apparent molecular mass of 32 kDa and a pI of 9.5. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cDNA cDNa PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 presence presence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 exons exon NOUN NNS Number=Plur _ _ _ _ 15 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 mass mass NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 32 32 NUM CD NumType=Card _ _ _ _ 25 kDa kDa PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 pI pi NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 9.5 9.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4209 # text = Primer extension analysis of C/EBP-epsilon mRNA detected a single major transcription start site approximately 200 bp upstream of the start codon. 1 Primer Primer NOUN NN Number=Sing _ _ _ _ 2 extension extension NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 single single ADJ JJ Degree=Pos _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 start start NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 approximately approximately ADV RB _ _ _ _ _ 19 200 200 NUM CD NumType=Card _ _ _ _ 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 upstream upstream NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 start start NOUN NN Number=Sing _ _ _ _ 25 codon codon NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4210 # text = The putative promoter area is similar to those of several other myeloid-cell-specific genes in that it contains no TATAAA box but has a number of purine-rich stretches with multiple sites for the factors of the Ets family of transcriptional regulators. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 area area NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 myeloid myeloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 no no DET DT _ _ _ _ _ 23 TATAAA TATAAa NOUN NN Number=Sing _ _ _ _ 24 box box NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 number number NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 rich rich ADJ JJ Degree=Pos _ _ _ _ 33 stretches stretch NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Ets et NOUN NNS Number=Plur _ _ _ _ 43 family family NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 46 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4211 # text = Northern blot analyses indicated a highly restricted mRNA expression pattern, with the strongest expression occurring in promyelocyte and late-myeloblast-like cell lines. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 myeloblast myeloblast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4212 # text = Western blot and immunoprecipitation studies using rabbit anti-C/EBP-epsilon antibodies raised against the N-terminal portion of C/EBP-epsilon (amino acids 1 to 115) showed that C/EBP-epsilon is a 32-kDa nuclear phosphoprotein. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 8 anti-C anti-c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 EBP Ebp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 against against ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 N- N- SYM SYM _ _ _ _ SpaceAfter=No 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 portion portion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 23 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 amino amino DET DT _ _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 115 115 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 EBP- EBP- PUNCT : _ _ _ _ SpaceAfter=No 38 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kDa kDa NOUN NN Number=Sing _ _ _ _ 44 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 45 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4213 # text = The human C/EBP-epsilon protein exhibited strong and specific binding to double-stranded DNA containing consensus C/EBP sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 strong strong ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded stranded VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 consensus consensus NOUN NN Number=Sing _ _ _ _ 21 C/ C/ PUNCT HYPH _ _ _ _ SpaceAfter=No 22 EBP EBP NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4214 # text = Cotransfection of the C/EBP-epsilon sense and antisense expression constructs together with chloramphenicol acetyltransferase reporter vectors containing myeloid-cell-specific c-mim and human myeloperoxidase promoters suggested a role for C/EBP-epsilon transcription factor in the regulation of a subset of myeloid-cell-specific genes. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 9 sense sense NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 constructs construct NOUN NNS Number=Plur _ _ _ _ 14 together together ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 17 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 vectors vector NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 myeloid-cell myeloid-cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 c-mim c-mim NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ _ 28 promoters promoter NOUN NNS Number=Plur _ _ _ _ 29 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 regulation regulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 subset subset NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 specific specific ADJ JJ Degree=Pos _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 4215 # text = Transient tranfection of a promyelocyte cell line (NB4) with a C/EBP-epsilon expression plasmid increased cell growth by sevenfold, while antisense C/EBP-epsilon caused a fivefold decrease in clonal growth of these cells. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 tranfection tranfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NB4 NB4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 epsilon epsilon X FW Foreign=Yes _ _ _ _ 18 expression expression X GW _ _ _ _ _ 19 plasmid plasmid X AFX _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 sevenfold sevenfold ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 while while SCONJ IN _ _ _ _ _ 27 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 28 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 EBP- EBP- SYM NFP _ _ _ _ SpaceAfter=No 31 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 32 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 fivefold fivefold ADJ JJ Degree=Pos _ _ _ _ 35 decrease decrease NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 38 growth growth NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4216 # text = Document 003001300 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001300 003001300 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4217 # text = Regulation of the Ets-related transcription factor Elf-1 by binding to the retinoblastoma protein. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ets- Ets- SYM SYM _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4218 # text = The retinoblastoma gene product (Rb) is a nuclear phosphoprotein that regulates cell cycle progression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 cycle cycle NOUN NN Number=Sing _ _ _ _ 16 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4219 # text = Elf-1 is a lymphoid-specific Ets transcription factor that regulates inducible gene expression during T cell activation. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 Ets et NOUN NNS Number=Plur _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4220 # text = In this report, it is demonstrated that Elf-1 contains a sequence motif that is highly related to the Rb binding sites of several viral oncoproteins and binds to the pocket region of Rb both in vitro and in vivo. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 highly highly ADV RB _ _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Rb Rb NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 binds bind NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 pocket pocket NOUN NN Number=Sing _ _ _ _ 34 region region NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 Rb Rb PROPN NNP Number=Sing _ _ _ _ 37 both both CCONJ CC _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 vitro vitro NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 4221 # text = Elf-1 binds exclusively to the underphosphorylated form of Rb and fails to bind to Rb mutants derived from patients with retinoblastoma. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 binds bind NOUN NNS Number=Plur _ _ _ _ 5 exclusively exclusively ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 underphosphorylated underphosphorylated ADJ JJ Degree=Pos _ _ _ _ 9 form form NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Rb Rb PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 bind bind VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 Rb Rb PROPN NNP Number=Sing _ _ _ _ 18 mutants mutant NOUN NNS Number=Plur _ _ _ _ 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4222 # text = Co-immunoprecipitation experiments demonstrated an association between Elf-1 and Rb in resting normal human T cells. 1 Co co PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -immunoprecipitation -immunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Rb Rb PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 resting rest VERB VBG VerbForm=Ger _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4223 # text = After T cell activation, the phosphorylation of Rb results in the release of Elf-1, which is correlated temporally with the activation of Elf-1-mediated transcription. 1 After after SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rb Rb PROPN NNP Number=Sing _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 temporally temporally ADV RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4224 # text = Overexpression of a phosphorylation-defective form of Rb inhibited Elf-1-dependent transcription during T cell activation. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 defective defective ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rb Rb PROPN NNP Number=Sing _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4225 # text = These results demonstrate that Rb interacts specifically with a lineage-restricted Ets transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rb Rb PROPN NNP Number=Sing _ _ _ _ 6 interacts interact NOUN NNS Number=Plur _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 Ets Et NOUN NNS Number=Plur _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4226 # text = This regulated interaction may be important for the coordination of lineage-specific effector functions such as lymphokine production with cell cycle progression in activated T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 regulated regulate ADJ JJ Degree=Pos _ _ _ _ 3 interaction interaction NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 coordination coordination NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 effector effector NOUN NN Number=Sing _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 lymphokine lymphokine ADJ JJ Degree=Pos _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ _ 23 progression progression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4227 # text = Document 003001301 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001301 003001301 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4228 # text = Human cytomegalovirus induces interleukin-8 production by a human monocytic cell line, THP-1, through acting concurrently on AP-1- and NF-kappaB-binding sites of the interleukin-8 gene. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 8 8 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 through through SCONJ IN _ _ _ _ _ 20 acting act VERB VBG VerbForm=Ger _ _ _ _ 21 concurrently concurrently ADV RB _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 kappaB- kappaB- PUNCT , _ _ _ _ SpaceAfter=No 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 8 8 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4229 # text = Cytomegalovirus (CMV) infection induced interleukin-8 (IL-8) gene transcription in a human monocytic cell line, THP-1 cells, leading to IL-8 secretion. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 leading lead VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 8 8 NUM CD NumType=Card _ _ _ _ 34 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4230 # text = The functional analysis of the IL-8 gene revealed that both AP-1- and NF-kappaB factor-binding elements were involved in conferring the responsiveness to CMV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 8 8 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in SCONJ IN _ _ _ _ _ 28 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4231 # text = Moreover, electrophoretic mobility shift assays demonstrated that CMV induced the formation of NF-kappaB and AP-1 complexes. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 CMV CMV PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4232 # text = These results suggest that CMV activates these transcriptional factors, resulting in IL-8 gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CMV CMV PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 resulting result VERB VBG VerbForm=Ger _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4233 # text = Document 003001302 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001302 003001302 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4234 # text = The NF kappa B independent cis-acting sequences in HIV-1 LTR responsive to T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ _ 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B B PROPN NNP Number=Sing _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 acting acte VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 T- t- SYM NFP _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4235 # text = The rate of transcription initiation directed by the long terminal repeat (LTR) of HIV-1 increases in response to mitogenic stimuli of T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rate rate NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 initiation initiation NOUN NN Number=Sing _ _ _ _ 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 increases increase NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 24 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4236 # text = Here we show that the response of the HIV-1 LTR may be governed by two independent sequences located 5' to the site of transcription initiation sequences that bind either NFAT-1 or NF kappa B. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 governed govern VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 sequences sequence NOUN NNS Number=Plur _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 initiation initiation NOUN NN Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ _ 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4237 # text = The rate of LTR-directed gene expression increased in response to treatment with either a phorbol ester or tumor necrosis factor alpha if either the NFAT-1 or NF kappa B binding sites were deleted, but failed to respond to these mitogenic stimuli if both sequences were absent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rate rate NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 treatment treatment VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 ester ester NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 if if SCONJ IN _ _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 failed fail VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 respond respond VERB VB VerbForm=Inf _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 45 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 46 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 47 if if SCONJ IN _ _ _ _ _ 48 both both DET DT _ _ _ _ _ 49 sequences sequence NOUN NNS Number=Plur _ _ _ _ 50 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4238 # text = The HIV-1 mutant virus containing both NF kappa B and NFAT-1 deletion was able to replicate although at a much decreased growth rate, while the deletion of NFAT-1 alone increased the viral growth rate in Jurkat cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 deletion deletion NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 21 although although SCONJ IN _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 much much ADJ JJ Degree=Pos _ _ _ _ 25 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 deletion deletion NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 alone alone ADV RB _ _ _ _ _ 37 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ _ 41 rate rate NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4239 # text = Neither deletion of NF kappa B nor deletion of NFAT-1 decreased activation of viral replication by phorbol ester. 1 Neither neither DET DT _ _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 nor nor ADJ JJ Degree=Pos _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4240 # text = Document 003001303 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001303 003001303 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4241 # text = Control of NF-kappa B activity by the I kappa B beta inhibitor. 1 Control Control PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4242 # text = The transcription factor NF-kappa B is maintained in an inactive cytoplasmic state by I kappa B inhibitors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 state state NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa X FW Foreign=Yes _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4243 # text = In mammalian cells, I kappa B alpha and I kappa B beta proteins have been purified and shown to be the inhibitors of NF-kappa B through their association with the p65 or c-Rel subunits. 1 In in ADP IN _ _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 association association NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 p65 p65 NOUN NN Number=Sing _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Rel Rel NOUN NN Number=Sing _ _ _ _ 39 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4244 # text = In addition, we have isolated a third NF-kappa B inhibitor, I kappa B epsilon (1). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4245 # text = Upon treatment with a large variety of inducers, I kappa B alpha, I kappa B beta are proteolytically degraded, resulting in NF-kappa B translocation into the nucleus. 1 Upon upon ADP IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 large large ADJ JJ Degree=Pos _ _ _ _ 6 variety variety NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa X FW Foreign=Yes _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 proteolytically proteolytically ADV RB _ _ _ _ _ 21 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 resulting result VERB VBG VerbForm=Ger _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 translocation translocation NOUN NN Number=Sing _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4246 # text = Here we show that in E29.1 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 E29.1 E29.1 PROPN NNP Number=Sing _ _ _ _ # sent_id = 4247 # text = T cell hybridoma 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ # sent_id = 4248 # text = I kappa B alpha and I kappa B beta are equally associated with p65 and that I kappa B beta is degraded in response to TNF alpha in contrast to what has been originally published. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 equally equally ADV RB _ _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 p65 p65 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 beta beta PROPN NNP Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 contrast contrast NOUN NN Number=Sing _ _ _ _ 30 to to SCONJ IN _ _ _ _ _ 31 what what PRON WP PronType=Int _ _ _ _ 32 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 originally originally ADV RB _ _ _ _ _ 35 published publish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4249 # text = Our data also suggest that, unlike I kappa B alpha, I kappa B beta is constitutively phosphorylated and resynthesized as a hypophosphorylated form. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 unlike unlike ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 resynthesized resynthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 hypophosphorylated hypophosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4250 # text = The absence of slow migrating forms of I kappa B beta following stimulation suggests that the phosphorylation does not necessarily constitute the signal-induced event which targets the molecule for proteolysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 slow slow ADJ JJ Degree=Pos _ _ _ _ 5 migrating migrating NOUN NN Number=Sing _ _ _ _ 6 forms form NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 necessarily necessarily ADV RB _ _ _ _ _ 21 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 event event NOUN NN Number=Sing _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 targets target AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 proteolysis. proteolysis. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4251 # text = Document 003001304 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001304 003001304 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4252 # text = Transcription of a minimal promoter from the NF-IL6 gene is regulated by CREB/ATF and SP1 proteins in U937 promonocytic cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 ATF ATF PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 SP1 SP1 NUM CD NumType=Card _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4253 # text = NF-IL6 is an important transcriptional regulator of genes induced in activated monocytes/macrophages, and NF-IL6 is the only CCAAT/enhancer-binding protein (C/EBP) family member whose steady-state mRNA levels increase upon activation of monocytes (1). 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 only only ADJ JJ Degree=Pos _ _ _ _ 25 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 member member NOUN NN Number=Sing _ _ _ _ 37 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 38 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 state state NOUN NN Number=Sing _ _ _ _ 41 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 42 levels level NOUN NNS Number=Plur _ _ _ _ 43 increase increase NOUN NN Number=Sing _ _ _ _ 44 upon upon ADP IN _ _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4254 # text = We show that increased transcription of the NF-IL6 gene is responsible, at least in part, for induction of NF-IL6 mRNA following activation of U937 promonocytic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 26 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4255 # text = We have identified a 104-bp minimal promoter region of the NF-IL6 gene that is sufficient for basal and activation-dependent induction of transcription in U937 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 104 104 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 bp bp NOUN NN Number=Sing _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 basal basal NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4256 # text = This region contains binding sites for the cAMP response element-binding protein/activation transcription factor (CREB/ATF) and Sp1 families of transcription factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cAMP camp NOUN NN Number=Sing _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 25 families family NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4257 # text = Each site is functionally important and contributes independently to transcription of the NF-IL6 gene in U937 cells. 1 Each each DET DT _ _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 independently independently ADV RB _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4258 # text = Document 003001305 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001305 003001305 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4259 # text = Identification of nucleotide sequences that regulate transcription of the MCF13 murine leukemia virus long terminal repeat in activated T cells. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 MCF Mcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 13 13 NUM CD NumType=Card _ _ _ _ 12 murine murine NOUN NN Number=Sing _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 long long ADV RB Degree=Pos _ _ _ _ 16 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4260 # text = The region downstream of the enhancer (DEN) of the long terminal repeat of the mink cell focus-forming murine leukemia virus is important for viral pathogenicity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 downstream downstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 DEN DEN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 long long ADJ JJ Degree=Pos _ _ _ _ 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 repeat repeat NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mink mink NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 focus focus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 forming form VERB VBG VerbForm=Ger _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 viral viral ADJ JJ Degree=Pos _ _ _ _ 29 pathogenicity pathogenicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4261 # text = Another important activity of DEN is its control of transcription in activated T cells, and we have determined that an NF-kappaB site is critical for this activity. 1 Another another DET DT _ _ _ _ _ 2 important important ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 DEN DEN PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4262 # text = Document 003001306 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001306 003001306 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4263 # text = Lymphoid specific gene expression of the adenovirus early region 3 promoter is mediated by NF-kappa B binding motifs. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 adenovirus adenovirus ADJ JJ Degree=Pos _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4264 # text = A primary site of infection by human adenoviruses is lymphoid cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 adenoviruses adenoviruse NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4265 # text = However, analysis of the viral control elements and the cellular factors that regulate adenoviral gene expression in lymphocytes has not been reported. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 viral viral ADJ JJ Degree=Pos _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4266 # text = The adenovirus early region 3 (ES) gene products are involved in the maintenance of viral persistence by complexing with the class I MHC antigens, thus preventing their cell surface expression with a resultant decrease in host immunologic destruction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adenovirus adenovirus ADJ JJ Degree=Pos _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ES ES NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 products product NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 persistence persistence NOUN NN Number=Sing _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 complexing complex VERB VBG VerbForm=Ger _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 MHC MHC PROPN NNP Number=Sing _ _ _ _ 26 antigens antigens NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 thus thus ADV RB _ _ _ _ _ 29 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 resultant resultant ADJ JJ Degree=Pos _ _ _ _ 37 decrease decrease NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 host host NOUN NN Number=Sing _ _ _ _ 40 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 41 destruction destruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4267 # text = To determine whether different cellular factors were involved in E3 regulation in lymphocytes as compared with HeLa cells, both DNA binding and transfection analysis with the E3 promoter in both cell types were performed. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 E3 E3 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transfection transfection NOUN NN Number=Sing _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 E3 E3 NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4268 # text = These studies detected two novel domains referred to as L1 and L2 with a variety of lymphoid but not HeLa extracts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 domains domain NOUN NNS Number=Plur _ _ _ _ 7 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 L1 L1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 L2 L2 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 variety variety NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4269 # text = Each of these domains possessed strong homology to motifs previously found to bind the cellular factor NF-kappa B. 1 Each each DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 domains domains NOUN NNS Number=Plur _ _ _ _ 5 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 strong strong ADJ JJ Degree=Pos _ _ _ _ 7 homology homology NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 motifs motif NOUN NNS Number=Plur _ _ _ _ 10 previously previously ADV RB _ _ _ _ _ 11 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4270 # text = Transfections of E3 constructs linked to the chloramphenicol acetyltransferase gene revealed that mutagenesis of the distal NF-kappa B motif (L2) had minimal effects on promoter expression in HeLa cells, but resulted in dramatic decreases in expression by lymphoid cells. 1 Transfections Transfection NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 E3 E3 NUM CD NumType=Card _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 9 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 distal distal ADJ JJ Degree=Pos _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 motif motif NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 L2 l2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 39 decreases decrease NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4271 # text = In contrast, mutagenesis of proximal NF-kappa B motif (L1) had minimal effects on gene expression in both HeLa cells and lymphoid cells but resulted in a small, but reproducible, increase in gene expression in lymphoid cells when coupled to the L2 mutation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 L1 L1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 small small ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 reproducible reproducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 increase increase NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 gene gene ADJ JJ Degree=Pos _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 when when ADV WRB PronType=Int _ _ _ _ 45 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 L2 l2 NOUN NN Number=Sing _ _ _ _ 49 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4272 # text = Reversing the position and subsequent mutagenesis of the L1 and L2 domains indicated that the primary sequence of these motifs rather than their position in the E3 promoter was critical for regulating gene expression. 1 Reversing Reverse VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 position position NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 L1 L1 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 L2 L2 NUM CD NumType=Card _ _ _ _ 12 domains domain NOUN NNS Number=Plur _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 motifs motif NOUN NNS Number=Plur _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 position position NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 E3 E3 NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 for for SCONJ IN _ _ _ _ _ 32 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4273 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4274 # text = Document 003001307 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001307 003001307 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4275 # text = The Megakaryocyte/Platelet-specific enhancer of the alpha2beta1 integrin gene: two tandem AP1 sites and the mitogen-activated protein kinase signaling cascade. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Megakaryocyte Megakaryocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 alpha2 alpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 beta1 beta1 NUM CD NumType=Card _ _ _ _ 12 integrin integrin NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 tandem tandem NOUN NN Number=Sing _ _ _ _ 17 AP1 AP1 NUM CD NumType=Card _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 27 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4276 # text = The alpha2beta1 integrin, a collagen receptor on platelets and megakaryocytes, is required for normal platelet function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 alpha2 alpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 beta1 beta1 NUM CD NumType=Card _ _ _ _ 4 integrin integrin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 collagen collagen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 platelets platelet NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 platelet platelet NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4277 # text = Transcriptional regulation of the alpha2 integrin gene in cells undergoing megakaryocytic differentiation requires a core promoter between bp -30 and -92, a silencer between bp -92 and -351, and megakaryocytic enhancers in the distal 5' flank. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 6 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 11 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 core core NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 -30 -30 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 silencer silencer NOUN NN Number=Sing _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 92 92 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 351 351 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 36 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 distal distal ADJ JJ Degree=Pos _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT '' _ _ _ _ _ 42 flank flank NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4278 # text = We have now identified a 229-bp region of the distal 5' flank of the alpha2 integrin gene required for high-level enhancer activity in cells with megakaryocytic features. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 229 229 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 distal distal ADJ JJ Degree=Pos _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT '' _ _ _ _ _ 15 flank flank NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 19 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 level level NOUN NN Number=Sing _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 32 features feature NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4279 # text = Two tandem AP1 binding sites with dyad symmetry are required for enhancer activity and for DNA-protein complex formation with members of the c-fos/c-jun family. 1 Two two NUM CD NumType=Card _ _ _ _ 2 tandem tandem NOUN NN Number=Sing _ _ _ _ 3 AP1 AP1 NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 dyad dyad NOUN NN Number=Sing _ _ _ _ 8 symmetry symmetry NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 enhancer enhancer ADJ JJR Degree=Cmp _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 members member NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 c- c- SYM SYM _ _ _ _ SpaceAfter=No 26 fos/c fos/c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 -jun -jun ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4280 # text = The requirement for AP1 activation suggested a role for the mitogen-activated protein kinase (MAPK) signaling pathway in regulating alpha2 integrin gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 AP1 AP1 NUM CD NumType=Card _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mitogen mitogen VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 signaling signale NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 24 integrin integrin NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4281 # text = Inhibition of the MAP kinase cascade with PD98059, a specific inhibitor of MAPK kinase 1, prevented the expression of the alpha2 integrin subunit in cells induced to become megakaryocytic. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MAP map PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 cascade cascade NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 24 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 25 subunit subunit NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 become become VERB VB VerbForm=Inf _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4282 # text = We provide a model of megakaryocytic differentiation in which expression of the alpha2 integrin gene requires signaling via the MAP kinase pathway to activate two tandem AP1 binding sites in the alpha2 integrin enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 alpha2 alpha2 NOUN NN Number=Sing _ _ _ _ 14 integrin integrin ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 requires require NOUN NNS Number=Plur _ _ _ _ 17 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 MAP map PROPN NNP Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 activate activate VERB VB VerbForm=Inf _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 tandem tandem NOUN NN Number=Sing _ _ _ _ 27 AP1 AP1 NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 alpha2 alpha2 NOUN NN Number=Sing _ _ _ _ 33 integrin integrin ADP IN _ _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4283 # text = Document 003001308 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001308 003001308 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4284 # text = The evolutionarily conserved sequence upstream of the human Ig heavy chain S gamma 3 region is an inducible promoter: synergistic activation by CD40 ligand and IL-4 via cooperative NF-kappa B and STAT-6 binding sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 evolutionarily evolutionarily ADV RB Degree=Pos _ _ _ _ 3 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 Ig ig PROPN NNP Number=Sing _ _ _ _ 10 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 11 chain chain NOUN NN Number=Sing _ _ _ _ 12 S 's PART POS _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 25 ligand ligand PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 via via ADP IN _ _ _ _ _ 31 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 STAT Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 6 6 NUM CD NumType=Card _ _ _ _ 40 binding binding VERB VBG VerbForm=Ger _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4285 # text = Germline C gamma gene transcription is a crucial event in the process that leads to switch DNA recombination to IgG, but its regulation in the human is poorly understood. 1 Germline Germline PROPN NNP Number=Sing _ _ _ _ 2 C C PROPN NNP Number=Sing _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 event event NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 process process NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 switch switch VERB VB VerbForm=Inf _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 recombination recombination NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 human human NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 poorly poorly ADV RB _ _ _ _ _ 30 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4286 # text = We took advantage of our monoclonal model of germinal center B cell differentiation, IgM+ IgD+ CL-01 cells, to define the role of the I gamma 3 evolutionarily conserved sequence (ECS) in the germline transcriptional activation of the human C gamma 3 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 took take VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 advantage advantage NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 10 center center NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IgM IgM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 IgD IgD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 CL CL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 01 01 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 define define VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 I I PROPN NNP Number=Sing _ _ _ _ 31 gamma gamma NOUN NN Number=Sing _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ _ 33 evolutionarily evolutionarily ADV RB _ _ _ _ _ 34 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 germline germline NOUN NN Number=Sing _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 C C PROPN NNP Number=Sing _ _ _ _ 48 gamma gamma NOUN NN Number=Sing _ _ _ _ 49 3 3 NUM CD NumType=Card _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4287 # text = The I gamma 3 ECS lies upstream of the major I gamma 3 transcription initiation site and displays more than 90% identity with the corresponding human I gamma 1, I gamma 2, and I gamma 4 regions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 3 3 NUM CD NumType=Card _ _ _ _ 5 ECS ECS PROPN NNP Number=Sing _ _ _ _ 6 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 more more ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 identity identity NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 27 human human AUX MD VerbForm=Fin _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 gamma gamma NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 38 gamma gamma NOUN NN Number=Sing _ _ _ _ 39 4 4 NUM CD NumType=Card _ _ _ _ 40 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4288 # text = Reporter luciferase gene vectors containing the human gamma 3 ECS were used to transfect CL-01 cells, which have been shown to undergo Smu-->S gamma 3 DNA recombination, upon engagement of CD40 by CD40 ligand (CD40L) and exposure to IL-4. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 vectors vector NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 ECS Ec PROPN NNP Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transfect transfect VERB VB VerbForm=Inf _ _ _ _ 15 CL Cl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 01 01 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 undergo undergo PROPN NNP Number=Sing _ _ _ _ 26 Smu Smu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 --> --> PUNCT , _ _ _ _ SpaceAfter=No 28 S s PROPN NNP Number=Sing _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 upon upon ADP IN _ _ _ _ _ 35 engagement engagement NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD40 CD40 NUM CD NumType=Card _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 CD40 CD40 NUM CD NumType=Card _ _ _ _ 40 ligand ligand NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 CD40L CD40L NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 exposure exposure NOUN NN Number=Sing _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4289 # text = In these transfected CL-01 cells, CD40:CD40L engagement and exposure to IL-4 synergistically induced gamma 3 ECS-dependent luciferase reporter gene activation. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 CL CL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 01 01 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 CD40:CD40L Cd40:cd40l PROPN NNP Number=Sing _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 exposure exposure NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 4 for NUM CD NumType=Card _ _ _ _ 17 synergistically synergistically ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4290 # text = Targeted mutational analysis demonstrated that a tandem NF-kappa B/Rel binding motif is critical for the gamma 3 ECS responsiveness to both CD40L and IL-4, while a STAT-6-binding site is additionally required for IL-4 inducibility. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 mutational mutational ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tandem tandem NOUN NN Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ _ 22 ECS ECS PROPN NNP Number=Sing _ _ _ _ 23 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 CD40L CD40L PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 while while SCONJ IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 additionally additionally ADV RB _ _ _ _ _ 42 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 4 4 NUM CD NumType=Card _ _ _ _ 47 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4291 # text = Electrophoretic mobility shift assays showed that p50/p65/c-Rel and STAT-6 are effectively induced by CD40L and IL-4, respectively, and bind to specific DNA motifs within the ECS. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays ADV RB _ _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 p50/p65/c p50/p65/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 effectively effectively ADV RB _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 CD40L Cd40l PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 motifs motif NOUN NNS Number=Plur _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4292 # text = These partially overlapping CD40L and IL-4 responsive elements are functionally cooperative as the disruption of one of them prevents synergistic promoter activation. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 partially partially ADV RB _ _ _ _ _ 3 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 4 CD40L Cd40l PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 functionally functionally ADV RB _ _ _ _ _ 13 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 disruption disruption NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 one one NUM CD NumType=Card _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 prevents prevent NOUN NNS Number=Plur _ _ _ _ 22 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4293 # text = Thus, the gamma 3 ECS is an inducible promoter containing cis elements that critically mediate CD40L and IL-4-triggered transcriptional activation of the human C gamma 3 gene. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ECS ECS PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 cis cis NOUN NN Number=Sing _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 critically critically ADV RB _ _ _ _ _ 16 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 17 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 3 3 NUM CD NumType=Card _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4294 # text = Document 003001309 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001309 003001309 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4295 # text = Transcriptional control of the IL-5 gene by human helper T cells: IL-5 synthesis is regulated independently from IL-2 or IL-4 synthesis. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 helper helper NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 independently independently ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4296 # text = BACKGROUND: IL-5 is fundamentally involved in eosinophilic inflammation. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 fundamentally fundamentally ADV RB _ _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4297 # text = Control of IL-5 production may be effective for the management of allergic diseases. 1 Control Control PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 effective effective ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 management management NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 15 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4298 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4299 # text = We aimed to find the transcriptional mechanisms that regulate the IL-5 gene to selectively control IL-5 synthesis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 aimed aim VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 find find VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 selectively selectively ADV RB _ _ _ _ _ 17 control control VERB VB VerbForm=Inf _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 5 5 NUM CD NumType=Card _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4300 # text = METHODS: Allergen-specific T-cell clones and T-cell hybridomas were established from the peripheral blood lymphocytes of patients with asthma, and the transcriptional regulation of the IL-5 gene was investigated with transient transfection and electrophoretic mobility shift analysis. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Allergen Allergen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 5 5 NUM CD NumType=Card _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 transient transient NOUN NN Number=Sing _ _ _ _ 39 transfection transfection NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 42 mobility mobility NOUN NN Number=Sing _ _ _ _ 43 shift shift NOUN NN Number=Sing _ _ _ _ 44 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4301 # text = RESULTS: A human IL-5 promoter/enhancer-luciferase gene construct, pIL-5(-511)Luc, was transcribed on activation of IL-5-producing T-cell clones, but not IL-5-nonproducing clones. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 pIL pil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 (-511 (-511 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 Luc Luc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 producing produce VERB VBG VerbForm=Ger _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 nonproducing nonproducing VERB VBG VerbForm=Ger _ _ _ _ 44 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4302 # text = pIL-5(-511)Luc was transcribed by T-cell hybridomas derived from fusion between IL-5-producing T-cell clones and an IL-5 gene-nonexpressing T-cell line, but not by hybridomas derived from IL-5-nonproducing T-cell clones. 1 pIL pil NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 (-511 (-511 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 Luc Luc NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 hybridomas hybridoma AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 fusion fusion NOUN NN Number=Sing _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 producing produce VERB VBG VerbForm=Ger _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 clones clone NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 nonexpressing nonexpresse VERB VBG VerbForm=Ger _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 41 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 nonproducing nonproducing NOUN NN Number=Sing _ _ _ _ 48 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4303 # text = IL-5 synthesis was not only induced by T-cell receptor stimulation but also by IL-2 receptor stimulation. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4304 # text = Binding of NF-AT, NF-kappaB, and AP-1 was induced by T-cell receptor (TcR) stimulation, although there was no significant upregulation of binding by IL-2 stimulation. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 there there PRON EX _ _ _ _ _ 28 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 no no DET DT _ _ _ _ _ 30 significant significant ADJ JJ Degree=Pos _ _ _ _ 31 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 32 of of SCONJ IN _ _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4305 # text = CONCLUSION: IL-5 synthesis by human helper 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ # sent_id = 4306 # text = T cells is regulated at the transcriptional level. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4307 # text = A unique transcriptional mechanism distinct from those regulating the IL-2 or IL-4 genes seems to control the IL-5 gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 unique unique ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 control control VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4308 # text = Selective regulation of IL-5 gene transcription may be useful for treating eosinophlic inflammation. 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 useful useful ADJ JJ Degree=Pos _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 treating treat VERB VBG VerbForm=Ger _ _ _ _ 14 eosinophlic eosinophlic ADJ JJ Degree=Pos _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4309 # text = Document 003001310 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001310 003001310 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4310 # text = Molecular mechanisms of neutrophil-endothelial cell adhesion induced by redox imbalance. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 redox redox NOUN NN Number=Sing _ _ _ _ 12 imbalance imbalance NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4311 # text = Previous studies have implicated a role for intracellular thiols in the activation of nuclear factor-kappaB and transcriptional regulation of endothelial cell adhesion molecules. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 9 thiols thiol NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappab NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4312 # text = This study was designed to determine whether changes in endothelial cell glutathione (GSH) or oxidized glutathione (GSSG) can alter neutrophil adhesivity and to define the molecular mechanism that underlies this GSSG/GSH-induced adhesion response. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 GSH GSH NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 alter alter VERB VB VerbForm=Inf _ _ _ _ 24 neutrophil neutrophil ADP IN _ _ _ _ _ 25 adhesivity adhesivity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 define define VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 31 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 underlies underly VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 GSSG/GSH GSSG/GSh NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4313 # text = Treatment of human umbilical vein endothelial cell (HUVEC) monolayers for 6 hours with 0.2 mmol/L diamide and 1 mmol/L buthionine sulfoximine (BSO) decreased GSH levels and increased the ratio of GSSG to GSH without cell toxicity. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 5 vein vein NOUN NN Number=Sing _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HUVEC HUVEC NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 hours hour NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 0.2 0.2 NUM CD NumType=Card _ _ _ _ 17 mmol/L mmol/l NOUN NN Number=Sing _ _ _ _ 18 diamide diamide NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 mmol/L mmol/l NOUN NN Number=Sing _ _ _ _ 22 buthionine buthionine NUM CD NumType=Card _ _ _ _ 23 sulfoximine sulfoximine NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 BSO BSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ratio ratio NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 GSH Gsh VERB VB VerbForm=Inf _ _ _ _ 38 without without ADP IN _ _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 toxicity toxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4314 # text = These redox changes are similar to those observed with anoxia/reoxygenation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 redox redox NOUN NN Number=Sing _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anoxia anoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4315 # text = Diamide plus BSO-induced thiol/disulfide imbalance was associated with a biphasic increase in neutrophil adhesion to HUVECs with peak responses observed at 15 minutes (phase 1) and 240 minutes (phase 2). 1 Diamide Diamide PROPN NNP Number=Sing _ _ _ _ 2 plus plus CCONJ CC _ _ _ _ _ 3 BSO Bso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 thiol thiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 9 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 peak peak NOUN NN Number=Sing _ _ _ _ 23 responses response NOUN NNS Number=Plur _ _ _ _ 24 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 15 15 NUM CD NumType=Card _ _ _ _ 27 minutes minute NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 phase phase NOUN NN Number=Sing _ _ _ _ 30 1 1 X LS _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 240 240 NUM CD NumType=Card _ _ _ _ 34 minutes minute NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 phase phase NOUN NN Number=Sing _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4316 # text = N-Acetylcysteine treatment attenuated neutrophil adhesion in both phases, which indicated a role for GSH in the adhesion responses. 1 N not CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Acetylcysteine Acetylcysteine ADJ JJ Degree=Pos _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 neutrophil neutrophil ADP IN _ _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 GSH GSH PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4317 # text = Interestingly, phase 1 adhesion was inversely correlated with GSH levels but not with the GSSG/GSH ratio, whereas phase 2 neutrophil adhesion was positively correlated with GSSG/GSH ratio but not with GSH levels. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 phase phase NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inversely inversely ADV RB _ _ _ _ _ 8 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 GSSG Gssg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 GSH Gsh PROPN NNP Number=Sing _ _ _ _ 19 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 phase phase NOUN NN Number=Sing _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 positively positively ADV RB _ _ _ _ _ 28 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 GSH Gsh PROPN NNP Number=Sing _ _ _ _ 33 ratio ratio NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 GSH Gsh DET DT _ _ _ _ _ 38 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4318 # text = Intercellular adhesion molecule-1 and P-selectin-specific monoclonal antibodies attenuated the increased neutrophil adhesion during both phases, whereas an anti-E-selectin monoclonal antibody also attenuated the phase 2 response. 1 Intercellular Intercelular ADJ JJ Degree=Pos _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 P-selectin-specific P-selectin-specific ADJ JJ Degree=Pos _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 anti-E- anti-E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 phase phase NOUN NN Number=Sing _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4319 # text = Pretreatment with actinomycin D and cycloheximide or with competing ds-oligonucleotides that contained nuclear factor-kappaB or activator protein-1 cognate DNA sequences significantly attenuated the phase 2 response, which implicated a role for de novo protein synthesis. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 4 D d NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 with with SCONJ IN _ _ _ _ _ 9 competing compete VERB VBG VerbForm=Ger _ _ _ _ 10 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappab NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 cognate cognate NOUN NN Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 significantly significantly ADV RB _ _ _ _ _ 28 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 phase phase NOUN NN Number=Sing _ _ _ _ 31 2 2 NUM CD NumType=Card _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 implicated implicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 role role NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 de de PROPN NNP Number=Sing _ _ _ _ 40 novo novo PROPN NNP Number=Sing _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ _ 42 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4320 # text = Surface expression of intercellular adhesion molecule-1, P-selectin, and E-selectin on HUVECs correlated with the phase 1 and 2 neutrophil adhesion responses. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 P-selectin P-selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 selectin selectin NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 17 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 phase phase NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4321 # text = This study demonstrates that changes in endothelial cell GSSG/GSH cause transcription-independent and transcription-dependent surface expression of different endothelial cell adhesion molecules, which leads to a 2-phase neutrophil-endothelial adhesion response. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 12 cause cause NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 surface surface NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 phase phase NOUN NN Number=Sing _ _ _ _ 36 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 39 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4322 # text = Document 003001311 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001311 003001311 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4323 # text = Characterization of NF(P), the nuclear factor that interacts with the regulatory P sequence (5'-CGAAAATTTCC-3') of the human interleukin-4 gene: relationship to NF-kappa B and NF-AT. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 P p NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 5'-CGAAAATTTCC 5'-cgaaaatttcc NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 : : PUNCT : _ _ _ _ _ 32 relationship relationship NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4324 # text = The P sequence of the human interleukin-4 (IL-4) gene, which was defined as a responsive element for phorbol 12-myristate 13-acetate and calcium ionophore (A23187) in Jurkat 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 26 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ _ 34 ionophore ionophore ADV RB _ _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 A23187 A23187 X LS _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ # sent_id = 4325 # text = T cells, shares sequence similarity with the NF-kappa B and the NF-AT binding sites. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 shares share NOUN NNS Number=Plur _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 similarity similarity NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 AT AT SCONJ IN _ _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4326 # text = We examined whether NF(P), a nuclear factor specific for the P sequence, is related to NF-kappa B and NF-AT. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 P P NOUN NN Number=Sing _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4327 # text = NF-kappa B (P65 or P65/P50 heterodimer) bound to the P sequence in electrophoretic mobility shift assays (EMSA) and activated transcription through the P sequence when expression plasmids were cotransfected with P sequence-driven reporter plasmids in Jurkat T cells. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P65 P65 NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / SYM SYM _ _ _ _ SpaceAfter=No 10 P50 P50 NUM CD NumType=Card _ _ _ _ 11 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 bound bound ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 P p NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 P P NOUN NN Number=Sing _ _ _ _ 32 sequence sequence NOUN NN Number=Sing _ _ _ _ 33 when when ADV WRB PronType=Int _ _ _ _ 34 expression expression NUM CD NumType=Card _ _ _ _ 35 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 P p NOUN NN Number=Sing _ _ _ _ 40 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 reporter reporter NOUN NN Number=Sing _ _ _ _ 44 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 47 T T PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4328 # text = In EMSAs, NF(P) binding was inhibited by the unlabeled NF-AT binding site but not by the unlabeled AP1 binding site and purified NF-AT contained an activity that bound to the P sequence. 1 In in ADP IN _ _ _ _ _ 2 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 14 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 AT at SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 24 AP1 Ap1 NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 AT at ADV RB _ _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 bound bound ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 P P NOUN NN Number=Sing _ _ _ _ 40 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4329 # text = Both mobility shift and sequence specificity of NF-AT were similar to those of NF(P) and only a small amount of P65 was detected in NF(P) in crude nuclear extracts. 1 Both both DET DT _ _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 specificity specificity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 AT AT PRON WDT PronType=Rel _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 amount amount NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 P65 P65 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 crude crude ADJ JJ Degree=Pos _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4330 # text = These results indicate that the component(s) of NF-AT has the potential to reconstitute NF(P) whereas NF-kappa B alone cannot account for NF(P) in crude extracts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT AT PROPN NNP Number=Sing _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 potential potential NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 alone alone ADV RB _ _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 30 not not PART RB _ _ _ _ _ 31 account account VERB VB VerbForm=Inf _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 crude crude ADJ JJ Degree=Pos _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4331 # text = Unlike NF-AT, NF(P) does not contain AP1 as its DNA binding component. 1 Unlike unlike ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 contain contain VERB VB VerbForm=Inf _ _ _ _ 13 AP1 Ap1 NUM CD NumType=Card _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4332 # text = Document 003001312 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001312 003001312 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4333 # text = Activation of early growth response 1 gene transcription and pp90rsk during induction of monocytic differentiation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4334 # text = The present work has studied mechanisms responsible for induction of early growth response 1 (EGR-1) gene expression during monocytic differentiation of U-937 myeloid leukemia cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 937 937 NUM CD NumType=Card _ _ _ _ 29 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4335 # text = Differentiation of U-937 cells with 12-O-tetradecanoylphorbol-13-acetate (TPA), an activator of the serine/threonine protein kinase C, was associated with transcriptional activation of EGR-1 promoter-reporter constructs. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 937 937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 threonine threonine NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 reporter reporter NOUN NN Number=Sing _ _ _ _ 38 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4336 # text = The EGR-1 promoter contains six CC(A/T)6GG (CArG) motifs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 six six NUM CD NumType=Card _ _ _ _ 8 CC cc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 A/T A/T NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 6GG 6gg NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CArG CArG NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4337 # text = The two 5'-most distal CArG sequences conferred TPA inducibility. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 most most ADV RBS _ _ _ _ _ 7 distal distal ADJ JJ Degree=Pos _ _ _ _ 8 CArG CArG PROPN NNP Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4338 # text = In contrast, there was little effect of TPA on EGR-1 transcription in a TPA-resistant U-937 cell variant, designated TUR. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 there there PRON EX _ _ _ _ _ 5 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 little little ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TPA TPA PROPN NNP Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 resistant resistant NOUN NN Number=Sing _ _ _ _ 20 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 937 937 NUM CD NumType=Card _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 variant variant NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 TUR Tur NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4339 # text = Treatment of both U-937 and TUR cells with okadaic acid, an inhibitor of serine/threonine protein phosphatases 1 and 2A, was associated with induction of monocytic differentiation and EGR-1 transcription through the 5'-most CArG element. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 937 937 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 TUR Tur NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 threonine threonine NUM CD NumType=Card _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 through through ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 most most ADJ JJS Degree=Sup _ _ _ _ 44 CArG Carg NOUN NN Number=Sing _ _ _ _ 45 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4340 # text = Since these findings supported the involvement of serine/threonine protein phosphorylation in the regulation of EGR-1 expression, we studied activation of the 40S ribosomal protein S6 serine/threonine kinases, pp70S6K and pp90rsk. 1 Since since SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 findings finding NOUN NNS Number=Plur _ _ _ _ 4 supported support VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 involvement involvement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 threonine threonine NUM CD NumType=Card _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 S s NOUN NN Number=Sing _ _ _ _ 29 ribosomal ribosomal ADJ JJ Degree=Pos _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 S6 S6 NUM CD NumType=Card _ _ _ _ 32 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 threonine threonine NUM CD NumType=Card _ _ _ _ 35 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 K k NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4341 # text = Although both kinases participate in regulating cell growth, there was no detectable activation of pp70S6K during TPA- or okadaic acid-induced monocytic differentiation. 1 Although although SCONJ IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 no no DET DT _ _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 K k NUM CD NumType=Card _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4342 # text = Moreover, rapamycin, an inhibitor of pp70S6K activation, had no effect on induction of EGR-1 expression. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 K k NUM CD NumType=Card _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4343 # text = In contrast, analysis of pp90rsk activity by phosphorylation of a peptide derived from S6 protein demonstrated stimulation of this kinase in TPA-treated U-937, and not TUR, cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 S6 S6 NUM CD NumType=Card _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 TUR Tur ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4344 # text = Okadaic acid treatment of both cell types was associated with activation of pp90rsk. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 types type NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4345 # text = Document 003001313 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001313 003001313 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4346 # text = Pyrrolidine dithiocarbamate, a potent inhibitor of nuclear factor kappa B (NF-kappa B) activation, prevents apoptosis in human promyelocytic leukemia HL-60 cells and thymocytes. 1 Pyrrolidine Pyrrolidine NOUN NN Number=Sing _ _ _ _ 2 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potent potent ADJ JJ Degree=Pos _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 prevents prevent NOUN NNS Number=Plur _ _ _ _ 21 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 60 60 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4347 # text = We examined the effect of pyrrolidine dithiocarbamate (PDTC), which potently blocks the activation of nuclear factor kappa B (NF-kappa B), on the induction of apoptosis by a variety of agents. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 7 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 potently potently ADV RB _ _ _ _ _ 14 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 induction induction NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 variety variety NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4348 # text = Treatment of a human promyelocytic leukemia cell line, HL-60, with 10 micrograms/mL etoposide or 2 microM 1-beta-D-arabinofuranosylcytosine induced NF-kappa B activation within 1 hr and subsequently caused apoptosis within 3-4 hr. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 10 10 NUM CD NumType=Card _ _ _ _ 16 micrograms microgram NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 mL mL ADJ JJ Degree=Pos _ _ _ _ 19 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ _ 22 microM microm NOUN NN Number=Sing _ _ _ _ 23 1-beta 1-beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 D- D- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 arabinofuranosylcytosine arabinofuranosylcytosine NOUN NN Number=Sing _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 hr hr NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 subsequently subsequently ADV RB _ _ _ _ _ 38 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 within within ADP IN _ _ _ _ _ 41 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 4 4 NUM CD NumType=Card _ _ _ _ 44 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4349 # text = The simultaneous addition of 50-500 microM PDTC with these agents blocked NF-kappa B activation and completely abrogated both morphologically apoptotic changes and internucleosomal DNA fragmentation for up to 6 hr. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 500 500 NUM CD NumType=Card _ _ _ _ 8 microM microm NUM CD NumType=Card _ _ _ _ 9 PDTC PDTC NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 completely completely ADV RB _ _ _ _ _ 21 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 morphologically morphologically ADV RB _ _ _ _ _ 24 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 internucleosomal internucleosomal ADJ JJ Degree=Pos _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 up up ADV RB _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 6 6 NUM CD NumType=Card _ _ _ _ 34 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4350 # text = However, PDTC failed to inhibit the endonuclease activity contained in the whole cell lysates. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 4 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 endonuclease endonuclease NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 whole whole ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4351 # text = The inhibitory effect of PDTC was also observed in etoposide- and dexamethasone-induced apoptosis in human thymocytes at a concentration of 1-10 microM. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 etoposide etoposide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 dexamethasone dexamethasone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 concentration concentration NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4352 # text = Since PDTC has both antioxidant and metal-ion chelating activities, we tested the effects of N-acetyl-L-cysteine (NAC) (antioxidant) or o-phenanthroline (OP) (metal-ion chelator) on the induction of apoptosis. 1 Since since SCONJ IN _ _ _ _ _ 2 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 metal metal NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 ion ion NOUN NN Number=Sing _ _ _ _ 10 chelating chelating NOUN NN Number=Sing _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -L -l NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 antioxidant antioxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 o-phenanthroline o-phenanthroline NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 OP op PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 metal metal NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 -ion -ion NOUN NN Number=Sing _ _ _ _ 37 chelator chelator NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4353 # text = Pretreatment of HL-60 cells or thymocytes with 100-500 microM OP for 2 hr, but not 10-60 mM 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 500 500 NUM CD NumType=Card _ _ _ _ 13 microM microm PROPN NNP Number=Sing _ _ _ _ 14 OP op PROPN NNP Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -60 -60 NUM CD NumType=Card _ _ _ _ 23 mM mm NOUN NN Number=Sing _ _ _ _ # sent_id = 4354 # text = NAC, suppressed subsequent occurrence of apoptosis induced by etoposide. 1 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 5 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 etoposide etoposide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4355 # text = These results suggest that the activation of NF-kappa B plays an important role in the apoptotic process of human hematopoietic cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 19 process process NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4356 # text = Document 003001314 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001314 003001314 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4357 # text = LPS tolerance in monocytes/macrophages: three 3' cytosins are required in the DNA binding motif for detection of upregulated NF-kappa B p50 homodimers. 1 LPS Lp ADJ JJ Degree=Pos _ _ _ _ 2 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 cytosins cytosin NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 detection detection NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 upregulated upregulate ADJ JJ Degree=Pos _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 p50 p50 NUM CD NumType=Card _ _ _ _ 28 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4358 # text = When monocytes are stimulated with LPS (lipopolysaccharide) repeatedly then the initially high expression of the TNF (tumor necrosis factor) gene is only very low, i.e. the cells are tolerant to LPS. 1 When when ADV WRB PronType=Int _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 LPS Lps NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 repeatedly repeatedly ADV RB _ _ _ _ _ 11 then then ADV RB PronType=Dem _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initially initially ADV RB _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 very very ADV RB _ _ _ _ _ 28 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 i.e. i.e. X FW _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4359 # text = Tolerant cells still express the CD14 receptor and they can still be activated to mobilize NF-kappa B into nucleus. 1 Tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 still still ADV RB _ _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 still still ADV RB _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 mobilize mobilize VERB VB VerbForm=Inf _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4360 # text = Analysis of the binding proteins employing the -605 motif of the human TNF promoter (GGGGCTGTCCC) revealed that in tolerant cells of the human monocytic cell line Mono Mac 6 there is a predominance of p50p50 of NF-kappa B. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 employing employ VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 605 605 NUM CD NumType=Card _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GGGGCTGTCCC GGGGCTGTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 Mono Mono PROPN NNP Number=Sing _ _ _ _ 31 Mac Mac PROPN NNP Number=Sing _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ _ 33 there there PRON EX _ _ _ _ _ 34 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 predominance predominance NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 p50p50 p50p50 NUM CD NumType=Card _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa PROPN NNP Number=Sing _ _ _ _ 43 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4361 # text = We now show that a mutant motif that exchanges the terminal 3' C for a G fails to bind the p50 homodimer that is upregulated in LPS toler ant human Mono Mac 6 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 motif motif NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 exchanges exchange VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 C c NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 G g NOUN NN Number=Sing _ _ _ _ 18 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 LPS LPS PROPN NNP Number=Sing _ _ _ _ 29 toler toler ADV RB _ _ _ _ _ 30 ant ant VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 Mono Mono PROPN NNP Number=Sing _ _ _ _ 33 Mac Mac PROPN NNP Number=Sing _ _ _ _ 34 6 6 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4362 # text = The same is true for nuclear extracts taken from the murine P388D1 macrophage cell line when tested with the -516 motif of the murine TNF promoter (GGGGGCTTTCCC). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 true true ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 murine murine NOUN NN Number=Sing _ _ _ _ 12 P388D1 P388d1 NOUN NN Number=Sing _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 tested tested VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 516 516 NUM CD NumType=Card _ _ _ _ 22 motif motif NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 murine murine PROPN NNP Number=Sing _ _ _ _ 26 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 GGGGGCTTTCCC GGGGGCTTTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4363 # text = Here the wild type motif gives efficient binding of p50p50 that again is upregulated in tolerant cells whereas a mutant with a 3' G shows hardly any binding of p50p50. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild ADJ JJ Degree=Pos _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 motif motif NOUN NN Number=Sing _ _ _ _ 6 gives give VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p50p50 p50p50 NUM CD NumType=Card _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 again again ADV RB _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 mutant mutant NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ' ' PUNCT `` _ _ _ _ _ 25 G g NOUN NN Number=Sing _ _ _ _ 26 shows show NOUN NNS Number=Plur _ _ _ _ 27 hardly hardly ADV RB _ _ _ _ _ 28 any any DET DT _ _ _ _ _ 29 binding binding NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 p50p50 p50p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4364 # text = Conversely, the murine kappa light chain enhancer motif (GGGGACTTTCCG) does not efficiently bind the nuclear p50p50 from tolerant murine P388 macrophages. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 light light NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 GGGGACTTTCCG GGGGACTTTCCG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 bind bind VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 p50p50 p50p50 NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 tolerant tolerant NOUN NN Number=Sing _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 P388 P388 NOUN NN Number=Sing _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4365 # text = Binding is, however, readily detected when the 3' G is replaced by a C. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 readily readily ADV RB _ _ _ _ _ 7 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT `` _ _ _ _ _ 12 G g NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4366 # text = These data show that the detection of upregulated p50 homodimers in LPS tolerant cells is dependent on subtle differences in the sequence of the DNA binding motif. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 detection detection NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 upregulated upregulate ADJ JJ Degree=Pos _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 13 tolerant tolerant NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 19 differences difference NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 motif. motif. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4367 # text = Document 003001315 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001315 003001315 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4368 # text = Induction of Mn SOD in human monocytes without inflammatory cytokine production by a mutant endotoxin. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Mn Mn PROPN NNP Number=Sing _ _ _ _ 4 SOD SOD PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 without without ADP IN _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 15 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4369 # text = Endotoxin selectively induces monocyte 1 Endotoxin Endotoxin PROPN NNP Number=Sing _ _ _ _ 2 selectively selectively ADV RB _ _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ # sent_id = 4370 # text = Mn superoxide dismutase (SOD) without affecting levels of Cu,Zn SOD, catalase, or glutathione peroxidase. 1 Mn Mn ADJ JJ Degree=Pos _ _ _ _ 2 superoxide superoxide NOUN NN Number=Sing _ _ _ _ 3 dismutase dismutase NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SOD Sod NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 without without SCONJ IN _ _ _ _ _ 8 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Cu Cu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ SpaceAfter=No 13 Zn Zn PROPN NNP Number=Sing _ _ _ _ 14 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 glutathione glutathione VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 peroxidase peroxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4371 # text = However, little is known about the structure-activity relationship and the mechanism by which endotoxin induces Mn SOD. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 relationship relationship NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 endotoxin endotoxin ADP IN _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 Mn Mn PROPN NNP Number=Sing _ _ _ _ 20 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4372 # text = In this study we demonstrated that a mutant Escherichia coli endotoxin lacking myristoyl fatty acid at the 3' R-3-hydroxymyristate position of the lipid A moiety retained its full capacity to coagulate Limulus amoebocyte lysate compared with the wild-type E. coli endotoxin and markedly stimulated the activation of human monocyte nuclear factor-kappaB and the induction of Mn SOD mRNA and enzyme activity. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 9 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 10 coli coli NOUN NN Number=Sing _ _ _ _ 11 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 myristoyl myristoyl ADJ JJ Degree=Pos _ _ _ _ 14 fatty fatty NOUN NN Number=Sing _ _ _ _ 15 acid acid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ _ 20 R- R- SYM SYM _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 hydroxymyristate hydroxymyristate NOUN NN Number=Sing _ _ _ _ 24 position position NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lipid lipid NOUN NN Number=Sing _ _ _ _ 28 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 moiety moiety NOUN NN Number=Sing _ _ _ _ 30 retained retain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 32 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 full full ADJ JJ Degree=Pos _ _ _ _ 34 capacity capacity NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 coagulate coagulate VERB VB VerbForm=Inf _ _ _ _ 37 Limulus Limulus PROPN NNP Number=Sing _ _ _ _ 38 amoebocyte amoebocyte NOUN NN Number=Sing _ _ _ _ 39 lysate lysate NOUN NN Number=Sing _ _ _ _ 40 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 type type NOUN NN Number=Sing _ _ _ _ 46 E. E. NOUN NN Number=Sing _ _ _ _ 47 coli coli NOUN NN Number=Sing _ _ _ _ 48 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 markedly markedly ADV RB _ _ _ _ _ 51 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 human human ADJ JJ Degree=Pos _ _ _ _ 56 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 57 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 58 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 induction induction NOUN NN Number=Sing _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 Mn Mn PROPN NNP Number=Sing _ _ _ _ 64 SOD SOD PROPN NNP Number=Sing _ _ _ _ 65 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 68 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 4373 # text = However, in contrast to the wild-type endotoxin, it failed to induce significant production of tumor necrosis factor-alpha and macrophage inflammatory protein-1alpha by monocytes and did not induce the phosphorylation and nuclear translocation of mitogen-activated protein kinase. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 significant significant ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 induce induce VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 translocation translocation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4374 # text = These results suggest that 1) lipid A myristoyl fatty acid, although it is important for the induction of inflammatory cytokine production by human monocytes, is not necessary for the induction of Mn SOD, 2) endotoxin-mediated induction of Mn SOD and inflammatory cytokines are regulated, at least in part, through different signal transduction pathways, and 3) failure of the mutant endotoxin to induce tumor necrosis factor-alpha production is, at least in part, due to its inability to activate mitogen-activated protein kinase. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1 1 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 lipid lipid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 myristoyl myristoyl ADJ JJ Degree=Pos _ _ _ _ 10 fatty fatty NOUN NN Number=Sing _ _ _ _ 11 acid acid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 although although SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 induction induction NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Mn Mn PROPN NNP Number=Sing _ _ _ _ 36 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 2 2 X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 endotoxin- endotoxin- SYM NFP _ _ _ _ SpaceAfter=No 41 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 Mn Mn PROPN NNP Number=Sing _ _ _ _ 45 SOD SOD PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 48 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 49 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 at at ADV RB _ _ _ _ _ 53 least least ADV RBS Degree=Sup _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 through through ADP IN _ _ _ _ _ 58 different different ADJ JJ Degree=Pos _ _ _ _ 59 signal signal NOUN NN Number=Sing _ _ _ _ 60 transduction transduction NOUN NN Number=Sing _ _ _ _ 61 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 3 3 X LS _ _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 failure failure NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 70 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 71 to to PART TO _ _ _ _ _ 72 induce induce VERB VB VerbForm=Inf _ _ _ _ 73 tumor tumor NOUN NN Number=Sing _ _ _ _ 74 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 75 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 77 alpha alpha NOUN NN Number=Sing _ _ _ _ 78 production production NOUN NN Number=Sing _ _ _ _ 79 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 80 , , PUNCT , _ _ _ _ _ 81 at at ADV RB _ _ _ _ _ 82 least least ADV RBS Degree=Sup _ _ _ _ 83 in in ADP IN _ _ _ _ _ 84 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 due due ADP IN _ _ _ _ _ 87 to to ADP IN _ _ _ _ _ 88 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 89 inability inability NOUN NN Number=Sing _ _ _ _ 90 to to PART TO _ _ _ _ _ 91 activate activate VERB VB VerbForm=Inf _ _ _ _ 92 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 93 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 94 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 95 protein protein NOUN NN Number=Sing _ _ _ _ 96 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4375 # text = Document 003001316 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001316 003001316 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4376 # text = Of the GATA-binding proteins, only GATA-4 selectively regulates the human IL-5 gene promoter in IL-5 producing cells which express multiple GATA-binding proteins. 1 Of of ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 selectively selectively ADV RB _ _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 producing producing VERB VBG VerbForm=Ger _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 30 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4377 # text = Interleukin-5 (IL-5) is produced by T lymphocytes and known to support B cell growth and eosinophilic differentiation of the progenitor cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 support support NOUN NN Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 cell cell PROPN NNP Number=Sing _ _ _ _ 20 growth growth PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 progenitor progenitor ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4378 # text = Using ATL-16T cells which express IL-5 mRNA, we have identified a region, within the human IL-5 gene promoter, that regulates IL-5 gene transcription. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 ATL Atl ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 16T 16t ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 5 5 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 5 5 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4379 # text = This cis-acting sequence contains the core binding motif, (A/T)GATA(A/G), for GATA-binding family proteins and thus suggests the involvement of these family members. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting acting VERB VBG VerbForm=Ger _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 A/T Aetween PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 A/G A/G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 thus thus ADV RB _ _ _ _ _ 28 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 involvement involvement NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4380 # text = In this report, we describe the cloning of human GATA-4 (hGATA-4) and show that hGATA-4 selectively interacts with the -70 GATA site within the IL-5 proximal promoter region. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cloning cloning NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 selectively selectively ADV RB _ _ _ _ _ 26 interacts interact NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 70 70 NUM CD NumType=Card _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 5 5 NUM CD NumType=Card _ _ _ _ 38 proximal proximal NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4381 # text = By promoter deletion and mutation analyses, we established this region as a positive regulatory element. 1 By by ADP IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4382 # text = Cotransfection experiments revealed that both hGATA-4 and PMA/A23187 stimulation are necessary for the IL-5 promoter activation. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 A23187 A23187 NUM CD NumType=Card _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 5 5 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4383 # text = The requirement of another regulatory element called CLE0, which lies downstream of the -70 GATA site, was also demonstrated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 another another DET DT _ _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 downstream downstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 -70 -70 NUM CD NumType=Card _ _ _ _ 16 GATA GATa NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4384 # text = ATL-16T cells express mRNA of three GATA-binding proteins, hGATA-2, hGATA-3 and hGATA-4, and each of them has a potential to bind to the consensus (A/T)GATA(G/ A) motif. 1 ATL Atl ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 16T 16t ADJ JJS Degree=Sup _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 hGATA hGATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 30 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 potential potential NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 bind bind VERB VB VerbForm=Inf _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 consensus consensus NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 A/T A/T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 G/ G/ X ADD _ _ _ _ _ 44 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4385 # text = However, using ATL-16T nuclear extract, we demonstrated that GATA-4 is the only GATA-binding protein that forms specific DNA-protein complex with the -70 GATA site. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 16T 16T PROPN NNP Number=Sing _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 only only ADJ JJ Degree=Pos _ _ _ _ 19 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 forms form VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 70 70 NUM CD NumType=Card _ _ _ _ 34 GATA GATa NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4386 # text = The electrophoretic mobility shift assay with extracts of COS cells expressing GATA-binding proteins showed that GATA-4 has the highest binding affinity to the -70 GATA site among the three GATA-binding proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 COS Cos NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 12 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 highest highest ADJ JJS Degree=Sup _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 affinity affinity NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 70 70 NUM CD NumType=Card _ _ _ _ 30 GATA GATa NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 among among ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 three three NUM CD NumType=Card _ _ _ _ 35 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 binding binding NOUN NN Number=Sing _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4387 # text = When the transactivation ability was compared among the three, GATA-4 showed the highest activity. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 among among ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 highest highest ADJ JJS Degree=Sup _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4388 # text = These results demonstrate the selective role of GATA-4 in the transcriptional regulation of the IL-5 gene in a circumstance where multiple members of the GATA-binding proteins are expressed. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 selective selective ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 circumstance circumstance NOUN NN Number=Sing _ _ _ _ 24 where where ADV WRB PronType=Rel _ _ _ _ 25 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 expressed expressed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4389 # text = Document 003001317 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001317 003001317 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4390 # text = Expression of erythroid-specific genes in megakaryoblastic disorders. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 9 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4391 # text = Currently available data indicate that erythroid and megakaryocytic differentiation pathways are closely related to each other, and there may exist progenitor cells common to those two lineages may exist. 1 Currently currently ADV RB _ _ _ _ _ 2 available available ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 closely closely ADV RB _ _ _ _ _ 13 related related ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 each each DET DT _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 there there PRON EX _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 exist exist VERB VB VerbForm=Inf _ _ _ _ 22 progenitor progenitor ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 common common ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 lineages lineage NOUN NNS Number=Plur _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 exist exist VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4392 # text = Acute megakaryoblastic leukemia (AML-M7) and transient myeloproliferative disorder in Down's syndrome (TMD) are characterized by rapid growth of abnormal blast cells which express megakaryocytic markers. 1 Acute Acute ADV RB _ _ _ _ _ 2 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AML aml NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 M7 M7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transient transient ADJ JJ Degree=Pos _ _ _ _ 11 myeloproliferative myeloproliferative ADJ JJ Degree=Pos _ _ _ _ 12 disorder disorder NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Down Down PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TMD tMd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 27 blast blast ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 32 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4393 # text = These blast cells express lineage-specific transcription factors such as GATA-1 common to these lineages and frequently express erythroid-specific mRNAs such as gamma-globin and erythroid delta-aminolevulinate synthase (ALAS-E), indicating that most of the blasts in M7 and TMD cases have erythroid and megakaryocytic phenotypes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 blast blast ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 common common NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 lineages lineage NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 frequently frequently ADV RB _ _ _ _ _ 21 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 33 delta- delta- PUNCT , _ _ _ _ SpaceAfter=No 34 aminolevulinate aminolevulinate ADJ JJ Degree=Pos _ _ _ _ 35 synthase synthase NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ALAS Alas NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 43 that that SCONJ IN _ _ _ _ _ 44 most most ADJ JJS Degree=Sup _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 blasts blast NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 M7 M7 NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 TMD tMd NOUN NN Number=Sing _ _ _ _ 52 cases cas NOUN NNS Number=Plur _ _ _ _ 53 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 54 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 57 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4394 # text = These results suggest that blasts in M7 and TMD may correspond to progenitors of both erythroid and megakaryocytic lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 blasts blast NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 M7 M7 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TMD tMd NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 correspond correspond VERB VB VerbForm=Inf _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 19 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4395 # text = Document 003001318 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001318 003001318 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4396 # text = Replication of human immunodeficiency virus-1 in primary human T cells is dependent on the autocrine secretion of tumor necrosis factor through the control of nuclear factor-kappa B activation. 1 Replication Replication NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 control control NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4397 # text = Tumor necrosis factor (TNF)-alpha controls T-cell activation and is a major inducer of human immunodeficiency virus (HIV)-1 replication in chronically infected cells. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 controls control NOUN NNS Number=Plur _ _ _ _ 10 T- T- PUNCT : _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 inducer inducer NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT : _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 replication replication NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 chronically chronically ADV RB _ _ _ _ _ 30 infected infect ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4398 # text = Therefore, we have investigated its role in primary cultures of HIV-infected human T lymphocytes by using neutralizing anti-TNF-alpha antibodies or TNF-alpha. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 7 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 cultures culture NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 21 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4399 # text = Primary resting 1 Primary primary X GW _ _ _ _ _ 2 resting resting X ADD _ _ _ _ _ # sent_id = 4400 # text = T lymphocytes produced TNF-alpha and supported HIV replication after T-cell receptor activation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4401 # text = Addition of neutralizing anti-TNF-alpha antibodies drastically reduced p24 antigen release and prevented CD4+ cell depletion associated with infection. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 4 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 8 drastically drastically ADV RB _ _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 p24 p24 NUM CD NumType=Card _ _ _ _ 11 antigen antigen NUM CD NumType=Card _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 depletion depletion NOUN NN Number=Sing _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4402 # text = Anti-TNF-alpha also prevented nuclear factor-kappa B (NF-kappa B) activation, and a good correlation between this inhibition and inhibition of HIV replication was observed. 1 Anti-TNF Anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 good good ADJ JJ Degree=Pos _ _ _ _ 22 correlation correlation NOUN NN Number=Sing _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HIV Hiv NOUN NN Number=Sing _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 observed observe ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4403 # text = Moreover, supplementing the cultures with high doses of IL-2 reverted anti-TNF-alpha inhibition of cell proliferation but did not affect the inhibition of HIV p24 antigen release or NF-kappa B activation in the same cultures. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 supplementing supplement VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 doses dos NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 reverted revert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 affect affect VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ _ 29 p24 p24 NUM CD NumType=Card _ _ _ _ 30 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 31 release release NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 same same ADJ JJ Degree=Pos _ _ _ _ 41 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4404 # text = Moreover, anti-TNF-alpha inhibited HIV-1 long terminal repeat (LTR)-driven transcription of a reporter gene in primary T cells in response to activation, either in the presence or the absence of HIV-1 Tat. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 primary primary ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 presence presence NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 absence absence NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4405 # text = Our results support an important role for autocrine TNF-alpha secretion in controlling HIV replication in primary T cells because of its ability to maintain NF-kappa B elevated in the nucleus of T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 because because ADP IN _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4406 # text = Document 003001319 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001319 003001319 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4407 # text = A novel lipopolysaccharide-induced transcription factor regulating tumor necrosis factor alpha gene expression: molecular cloning, sequencing, characterization, and chromosomal assignment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 cloning cloning NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 sequencing sequencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 25 assignment assignment NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4408 # text = Lipopolysaccharide (LPS) is a potent stimulator of monocytes and macrophages, causing secretion of tumor necrosis factor alpha (TNF-alpha) and other inflammatory mediators. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 causing cause VERB VBG VerbForm=Ger _ _ _ _ 15 secretion secretion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4409 # text = Given the deleterious effects to the host of TNF-alpha, it has been postulated that TNF-alpha gene expression must be tightly regulated. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 deleterious deleterious ADJ JJ Degree=Pos _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 host host NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 must must AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 tightly tightly ADV RB _ _ _ _ _ 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4410 # text = The nature of the nuclear factor(s) that control TNF-alpha gene transcription in humans remains obscure, although NF-kappaB has been suggested. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nature nature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 humans human NOUN NNS Number=Plur _ _ _ _ 19 remains remains VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 obscure obscure ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4411 # text = Our previous studies pertaining to macrophage response to LPS identified a novel DNA-binding domain located from -550 to -487 in the human TNF-alpha promoter that contains transcriptional activity, but lacks any known NF-kappaB-binding sites. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 pertaining pertai VERB VBG VerbForm=Ger _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 macrophage macrophage VERB VB VerbForm=Inf _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 LPS LPS PROPN NNP Number=Sing _ _ _ _ 10 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 novel novel NOUN NN Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 550 550 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 487 487 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 any any DET DT _ _ _ _ _ 39 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4412 # text = We have used this DNA fragment to isolate and purify a 60-kDa protein binding to this fragment and obtained its amino-terminal sequence, which was used to design degenerate probes to screen a cDNA library from THP-1 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 purify purify VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kDa kDa NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 fragment fragment NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 design design VERB VB VerbForm=Inf _ _ _ _ 33 degenerate degenerate ADJ JJ Degree=Pos _ _ _ _ 34 probes probe NOUN NNS Number=Plur _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 screen screen NOUN NN Number=Sing _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 39 library library NOUN NN Number=Sing _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4413 # text = A novel cDNA clone (1.8 kb) was isolated and fully sequenced. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 clone clone NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 1.8 1.8 NUM CD NumType=Card _ _ _ _ 7 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 fully fully ADV RB _ _ _ _ _ 13 sequenced sequence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4414 # text = Characterization of this cDNA clone revealed that its induction was dependent on LPS activation of THP-1 cells; hence, the name LPS-induced TNF-alpha factor (LITAF). 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 clone clone PRON NN Number=Sing _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 hence hence ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 name name NOUN NN Number=Sing _ _ _ _ 25 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 LITAF LITAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4415 # text = Inhibition of LITAF mRNA expression in THP-1 cells resulted in a reduction of TNF-alpha transcripts. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 reduction reduction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4416 # text = In addition, high level of expression of LITAF mRNA was observed predominantly in the placenta, peripheral blood leukocytes, lymph nodes, and the spleen. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 predominantly predominantly ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 placenta placenta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lymph lymph NOUN NN Number=Sing _ _ _ _ 23 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4417 # text = Finally, chromosomal localization using fluorescence in situ hybridization revealed that LITAF mapped to chromosome 16p12-16p13.3. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 4 localization localization NOUN NN Number=Sing _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 situ situ NOUN NN Number=Sing _ _ _ _ 9 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 13 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 chromosome chromosome VERB VB VerbForm=Inf _ _ _ _ 16 16p12-16p13.3 16p12-16p13.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4418 # text = Together, these findings suggest that LITAF plays an important role in the activation of the human TNF-alpha gene and proposes a new mechanism to control TNF-alpha gene expression. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 proposes propose VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ _ 26 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 control control VERB VB VerbForm=Inf _ _ _ _ 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4419 # text = Document 003001320 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001320 003001320 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4420 # text = Human T cell activation through the activation-inducer molecule/CD69 enhances the activity of transcription factor AP-1. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 molecule/CD69 molecule/cd69 NOUN NN Number=Sing _ _ _ _ 11 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4421 # text = The induction of the AP-1 transcription factor has been ascribed to the early events leading to T cell differentiation and activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 ascribed ascribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 events event NOUN NNS Number=Plur _ _ _ _ 17 leading lead VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4422 # text = We have studied the regulation of AP-1 activity in human peripheral blood T lymphocytes stimulated through the activation inducer molecule (AIM)/CD69 activation pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 inducer inducer NOUN NN Number=Sing _ _ _ _ 22 molecule molecule NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 AIM aim NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 /CD69 /CD69 NUM CD NumType=Card _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4423 # text = Phorbol esters are required to induce AIM/CD69 cell-surface expression as well as for triggering the proliferation of T cells in conjunction with anti-AIM mAb. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 esters ester NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 AIM/CD69 AIM/CD69 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 for for SCONJ IN _ _ _ _ _ 16 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 anti anti X AFX _ _ _ _ SpaceAfter=No 26 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 27 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4424 # text = Mobility shift assays showed that addition of anti-AIM mAb to PMA-treated T lymphocytes markedly enhanced the binding activity of AP-1 to its cognate sequence, the phorbol ester response element. 1 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assays assays ADV RB _ _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 10 mAb mAb PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 markedly markedly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 cognate cognate NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 33 ester ester NOUN NN Number=Sing _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4425 # text = In contrast, anti-AIM mAb did not induce any change in the binding activity of NF-kappa B, a transcription factor whose activity is also regulated by protein kinase C. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anti anti X AFX _ _ _ _ SpaceAfter=No 5 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 any any DET DT _ _ _ _ _ 11 change change NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4426 # text = The increase in AP-1-binding activity was accompanied by the marked stimulation of the transcription of c-fos but not that of c-jun. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4427 # text = Blockade of the DNA-binding complexes with an anti-Fos mAb demonstrated a direct participation of c-Fos in the AP-1 complexes induced by anti-AIM mAb. 1 Blockade Blockade NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 complexes complex NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 anti anti X AFX _ _ _ _ SpaceAfter=No 11 -Fos -Fos PROPN NNP Number=Sing _ _ _ _ 12 mAb mAb PROPN NNP Number=Sing _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 direct direct ADJ JJ Degree=Pos _ _ _ _ 16 participation participation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Fos Fo NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 anti anti X AFX _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 AIM aim PROPN NNP Number=Sing _ _ _ _ 32 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4428 # text = Most of the AP-1 activity could be eliminated when the anti-AIM mAb was added to the culture medium in the presence of cycloheximide, suggesting that de novo protein synthesis is crucial for the induction of AP-1-binding activity. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 anti anti X AFX _ _ _ _ SpaceAfter=No 14 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 15 mAb mAb PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 culture culture NOUN NN Number=Sing _ _ _ _ 21 medium medium NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 de de PROPN NNP Number=Sing _ _ _ _ 31 novo novo NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 induction induction NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 binding bind VERB VBG VerbForm=Ger _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4429 # text = These data provide the evidence that activation of human peripheral blood T cells through the AIM activation pathway regulate the activity of AP-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 AIM aim NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4430 # text = Therefore, this pathway appears as a crucial step in the initiation of early T cell activation events. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 step step NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4431 # text = Document 003001321 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001321 003001321 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4432 # text = A critical role of Sp1- and Ets-related transcription factors in maintaining CTL-specific expression of the mouse perforin gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Ets- Ets- X GW _ _ _ _ SpaceAfter=No 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 14 CTL CTL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mouse mouse NOUN NN Number=Sing _ _ _ _ 21 perforin perforin ADP IN _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4433 # text = This study was designed to determine the potential cis-elements involved in transcriptional regulation of the mouse perforin gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mouse mouse NOUN NN Number=Sing _ _ _ _ 19 perforin perforin ADP IN _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4434 # text = DNase I hypersensitive site (DHS) mapping revealed that the perforin locus contained six DHS within 7.0 kb of the 5' upstream sequence (-7.0 kb) and two DHS in intron 2. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 DHS DHS NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 mapping mapping NOUN NN Number=Sing _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 perforin perforin NOUN NN Number=Sing _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ _ 14 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 six six NUM CD NumType=Card _ _ _ _ 16 DHS D NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 7.0 7.0 NUM CD NumType=Card _ _ _ _ 19 kb kb NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 sequence sequence NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 7.0 7.0 NUM CD NumType=Card _ _ _ _ 29 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 two two NUM CD NumType=Card _ _ _ _ 33 DHS D NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 intron intron NOUN NN Number=Sing _ _ _ _ 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4435 # text = The six 5' upstream and one intronic DHS were detected in only perforin-expressing lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 9 DHS D NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 perforin perforin ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4436 # text = Chloramphenicol acetyltransferase (CAT) activities directed by 5' upstream promoter were detected preferentially in perforin-expressing cell lines. 1 Chloramphenicol Chloramphenicol PROPN NNP Number=Sing _ _ _ _ 2 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 upstream upstream NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 preferentially preferentially ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 perforin perforin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4437 # text = A construct termed PFP5a containing -795 bp exhibited the highest CAT activity, and PFP9a20 containing only -73 bp also produced significantly high CAT activity in CTLL-R8 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 construct construct NOUN NN Number=Sing _ _ _ _ 3 termed term VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 PFP5 PFP5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 containing containing VERB VBG VerbForm=Ger _ _ _ _ 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 795 795 NUM CD NumType=Card _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ _ 10 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 highest highest ADJ JJS Degree=Sup _ _ _ _ 13 CAT cat NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 PFP9a20 PFP9a20 PROPN NNP Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 73 73 NUM CD NumType=Card _ _ _ _ 22 bp bp NOUN NN Number=Sing _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 CAT cat NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 R8 R8 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4438 # text = The proximal region in PFP9a20 contained two potential Sp1 binding sites (GC box and GT box) and one Ets binding site (EBS). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 PFP9a20 PFP9a20 NUM CD NumType=Card _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 potential potential NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GC Gc NOUN NN Number=Sing _ _ _ _ 14 box box NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GT Gt NOUN NN Number=Sing _ _ _ _ 17 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 Ets ets PROPN NNPS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4439 # text = Electrophoretic mobility shift assay showed that each of the cis-elements bound specific protein factors. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -elements -element NOUN NNS Number=Plur _ _ _ _ 12 bound bound ADJ JJ Degree=Pos _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4440 # text = When single-point mutation was introduced to each GC box, EBS, and GT box in PFP9a20, at least 3-fold less CAT activity was observed in CTLL-R8 cells. 1 When when ADV WRB PronType=Int _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 point point NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 GC Gc PROPN NNP Number=Sing _ _ _ _ 11 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GT Gt NOUN NN Number=Sing _ _ _ _ 17 box box NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 PFP9a20 PFP9a20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 at at ADV RB _ _ _ _ _ 22 least least ADV RBS Degree=Sup _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 less less ADV RBR Degree=Cmp _ _ _ _ 27 CAT cat ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 R8 R8 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4441 # text = To confirm the importance of the three cis-acting elements in the perforin gene expression, point mutation was introduced again to each proximal GC box, EBS, and GT box of PFP5a. 1 To to PART TO _ _ _ _ _ 2 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 importance importance NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -acting -acting VERB VBG VerbForm=Ger _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 perforin perforin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 point point NOUN NN Number=Sing _ _ _ _ 18 mutation mutation NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 again again ADV RB _ _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 each each DET DT _ _ _ _ _ 24 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 25 GC Gc NOUN NN Number=Sing _ _ _ _ 26 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 GT gt NOUN NN Number=Sing _ _ _ _ 32 box box NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PFP5 PFP5 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4442 # text = The point mutations resulted in a 2.5- to 3-fold reduction of CAT activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 point point NOUN NN Number=Sing _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fold fold NOUN NN Number=Sing _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4443 # text = The results suggest that a combination of the three proximal cis-acting elements may constitute a minimal region responsible for CTL-specific expression of perforin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 combination combination NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 11 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -acting -act ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 CTL CTL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 perforin perforin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4444 # text = Document 003001322 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001322 003001322 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4445 # text = Retinoic acid downmodulates erythroid differentiation and GATA1 expression in purified adult-progenitor culture. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 downmodulates downmodulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA1 Gata1 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 adult adult NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 14 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4446 # text = All-trans retinoic acid (RA) is an important morphogen in vertebrate development, a normal constituent in human adult blood and is also involved in the control of cell growth and differentiation in acute promyelocytic leukemia. 1 All all DET DT _ _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 trans tran NOUN NNS Number=Plur _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 morphogen morphogen NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 constituent constituent NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 adult adult NOUN NN Number=Sing _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 growth growth NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 acute acute ADJ JJ Degree=Pos _ _ _ _ 38 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 39 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4447 # text = We have examined the effects of RA on normal hematopoiesis by using early hematopoietic progenitor cells (HPC) stringently purified from adult peripheral blood. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RA RA PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 early early ADV RB Degree=Pos _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HPC HPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 stringently stringently ADV RB _ _ _ _ _ 21 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 adult adult NOUN NN Number=Sing _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4448 # text = In clonogenetic fetal calf serum-supplemented (FCS+) or -nonsupplemented (FCS-) culture treated with saturating levels of interleukin-3 (IL-3) granulocyte-macrophage colony-stimulating factor (GM-CSF) and erythropoietin (Ep) (combined with c-kit ligand in FCS(-)-culture conditions), RA induces a dramatic dose-dependent shift from erythroid to granulomonocytic colony formation, the latter colonies being essentially represented by granulocytic clones. 1 In in ADP IN _ _ _ _ _ 2 clonogenetic clonogenetic ADJ JJ Degree=Pos _ _ _ _ 3 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 4 calf calf NOUN NN Number=Sing _ _ _ _ 5 serum- serum- PUNCT : _ _ _ _ SpaceAfter=No 6 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 nonsupplemented nonsupplemented ADJ JJ Degree=Pos _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 FCS Fcs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 saturating saturating NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 Ep Ep PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 c- c- SYM NFP _ _ _ _ SpaceAfter=No 53 kit kit NOUN NN Number=Sing _ _ _ _ 54 ligand ligand NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 (- (- PUNCT . _ _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 culture culture NOUN NN Number=Sing _ _ _ _ 61 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 RA RA PROPN NNP Number=Sing _ _ _ _ 65 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 66 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 67 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 68 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 71 shift shift NOUN NN Number=Sing _ _ _ _ 72 from from ADP IN _ _ _ _ _ 73 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 74 to to ADP IN _ _ _ _ _ 75 granulomonocytic granulomonocytic ADJ JJ Degree=Pos _ _ _ _ 76 colony colony NOUN NN Number=Sing _ _ _ _ 77 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 , , PUNCT , _ _ _ _ _ 79 the the DET DT Definite=Def|PronType=Art _ _ _ _ 80 latter latter ADJ JJ Degree=Pos _ _ _ _ 81 colonies colony NOUN NNS Number=Plur _ _ _ _ 82 being be AUX VBG VerbForm=Ger _ _ _ _ 83 essentially essentially ADV RB _ _ _ _ _ 84 represented represent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 85 by by ADP IN _ _ _ _ _ 86 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 87 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 88 . . PUNCT . _ _ _ _ _ # sent_id = 4449 # text = This shift is apparently not caused by a recruitment phenomenon, because in FCS+ culture, the total number of colonies is not significantly modified by RA addition. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 apparently apparently ADV RB _ _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 10 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 because because SCONJ IN _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 colonies colony NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 RA RA PROPN NNP Number=Sing _ _ _ _ 29 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4450 # text = In FCS- liquid-suspension culture supplemented with saturating Ep level and low-dose IL-3/GM-CSF, adult HPC undergo unilineage erythropoietic differentiation: 1 In in ADP IN _ _ _ _ _ 2 FCS FCS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ _ 4 liquid liquid NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 suspension suspension NOUN NN Number=Sing _ _ _ _ 7 culture culture NOUN NN Number=Sing _ _ _ _ 8 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with SCONJ IN _ _ _ _ _ 10 saturating saturat VERB VBG VerbForm=Ger _ _ _ _ 11 Ep Ep PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dose dose NOUN NN Number=Sing _ _ _ _ 17 IL-3/GM IL-3/Gm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 adult adult NOUN NN Number=Sing _ _ _ _ 22 HPC Hpc NOUN NN Number=Sing _ _ _ _ 23 undergo undergo NOUN NN Number=Sing _ _ _ _ 24 unilineage unilineage NOUN NN Number=Sing _ _ _ _ 25 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 : : PUNCT : _ _ _ _ _ # sent_id = 4451 # text = Here again, treatment with high-dose RA induces a shift from the erythroid to granulocytic differentiation pathway. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 again again ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dose dose NOUN NN Number=Sing _ _ _ _ 9 RA Ra NOUN NN Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 shift shift NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4452 # text = Studies on RA time-response or pulse treatment in semisolid or liquid culture show that early RA addition is most effective, thus indicating that early but not late HPC are sensitive to its action. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 RA RA PROPN NNP Number=Sing _ _ _ _ 4 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 response response NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 pulse pulse NOUN NN Number=Sing _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 semisolid semisolid ADJ JJ Degree=Pos _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 liquid liquid ADJ JJ Degree=Pos _ _ _ _ 14 culture culture NOUN NN Number=Sing _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 RA RA NOUN NN Number=Sing _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 thus thus ADV RB _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 early early ADJ JJ Degree=Pos _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 late late ADJ JJ Degree=Pos _ _ _ _ 31 HPC Hpc PROPN NNPS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4453 # text = We then analyzed the expression of the master GATA1 gene, which encodes a finger transcription factor required for normal erythroid development; addition of RA to HPC stimulated into unilineage erythropoietic differentiation in liquid culture caused a virtually complete inhibition of GATA1 mRNA induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 then then ADV RB PronType=Dem _ _ _ _ 3 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 master master NOUN NN Number=Sing _ _ _ _ 9 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ _ 10 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 finger finger NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 addition addition NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 RA RA PROPN NNP Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 HPC HPC PROPN NNP Number=Sing _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 32 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 liquid liquid ADJ JJ Degree=Pos _ _ _ _ 36 culture culture NOUN NN Number=Sing _ _ _ _ 37 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 virtually virtually ADV RB _ _ _ _ _ 40 complete complete ADJ JJ Degree=Pos _ _ _ _ 41 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ _ 44 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4454 # text = These results indicate that RA directly inhibits the erythroid differentiation program at the level of early adult HPC, and may lead to a shift from the erythroid to granulocytic differentiation pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 program program NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 level level NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 early early ADJ JJ Degree=Pos _ _ _ _ 17 adult adult NOUN NN Number=Sing _ _ _ _ 18 HPC Hpc NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 lead lead VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 32 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4455 # text = This phenomenon is correlated with inhibition of GATA1 induction in the early stages of erythropoietic differentiation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA1 GATA1 NUM CD NumType=Card _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 stages stage NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4456 # text = Document 003001323 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001323 003001323 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4457 # text = STAT-related transcription factors are constitutively activated in peripheral blood cells from acute leukemia patients. 1 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4458 # text = A signal transduction pathway activated by many cytokines has recently been elaborated. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 many many ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 recently recently ADV RB _ _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 elaborated elaborate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4459 # text = The JAK kinases and the signal transducers and activators of transcription (STAT) factors have been found to be essential components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 JAK JAK PROPN NNP Number=Sing _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transducers transducer NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4460 # text = In this report, we describe the presence of constitutively activated 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 4461 # text = STAT factors in peripheral blood cells from patients with acute leukemia. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 acute acute NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4462 # text = We used oligonucleotide probes from the beta-casein and IRF-1 gene promoters and the ISRE probe to detect STAT proteins in nuclear extracts from acute leukemia cells in bandshift assays. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 4 probes probe NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 casein casein NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ISRE Isre ADJ JJ Degree=Pos _ _ _ _ 19 probe probe NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 detect detect VERB VB VerbForm=Inf _ _ _ _ 22 STAT Stat NOUN NN Number=Sing _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 extracts extract NOUN NNS Number=Plur _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 acute acute ADJ JJ Degree=Pos _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 bandshift bandshift ADJ JJ Degree=Pos _ _ _ _ 33 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4463 # text = Specific DNA protein complex formation was observed with the probes from the beta-casein and IRF-1 gene promoters, but not with the ISRE oligonucleotide probe, when cell extracts from acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML) were investigated. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ _ 5 formation formation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 probes probe NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 casein casein NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ISRE Isre NOUN NN Number=Sing _ _ _ _ 28 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 29 probe probe ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 when when ADV WRB PronType=Int _ _ _ _ 32 cell cell VERB VB VerbForm=Inf _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 acute acute ADJ JJ Degree=Pos _ _ _ _ 36 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 37 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ALL all ADV RB _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 acute acute VERB VB VerbForm=Inf _ _ _ _ 43 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 44 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 AML aml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4464 # text = We used nonradioactive oligonucleotides as competitors to show the specificity of the complex formation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 nonradioactive nonradioactive ADJ JJ Degree=Pos _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 competitors competitor NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 show show VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 specificity specificity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 complex complex ADJ JJ Degree=Pos _ _ _ _ 14 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4465 # text = Specific antibodies directed against the individual STAT proteins were used in supershift experiments. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 against against ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4466 # text = STAT5- and STAT1-related factors were detected in ALL and STAT1-, STAT3-, and STAT5-related proteins were present in nuclear cell extracts from AML. 1 STAT5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 STAT1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 ALL all PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 STAT3 STAT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 STAT5 stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 related related ADJ JJ Degree=Pos _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 present presend ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 extracts extract NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 AML AML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4467 # text = Since the cells were not treated with cytokines before the nuclear proteins were extracted, we conclude that these factors are constitutively activated in vivo. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 constitutively constitutively ADV RB _ _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4468 # text = It is likely that the constitutive activation of 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 likely likely ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ # sent_id = 4469 # text = STAT proteins is a part of the events of leukemogenesis. 1 STAT Stat PRON WP PronType=Int _ _ _ _ 2 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 part part NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4470 # text = Document 003001324 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001324 003001324 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4471 # text = Functional antagonism between vitamin D3 and retinoic acid in the regulation of CD14 and CD23 expression during monocytic differentiation of U-937 cells. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 5 D3 D3 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 14 14 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 937 937 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4472 # text = 1,25 alpha-Dihydroxicholecalciferol (VitD3) and retinoic acid (RA) are important regulators of the proliferation and differentiation of several cell types. 1 1,25 1,25 NUM CD NumType=Card _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 Dihydroxicholecalciferol Dihydroxicholecalciferol PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 VitD3 VitD3 X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 regulators regulator NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4473 # text = This paper describes how the expression of the monocyte-macrophage 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 how how ADV WRB PronType=Int _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 monocyte- monocyte- SYM SYM _ _ _ _ SpaceAfter=No 10 macrophage macrophage NOUN NN Number=Sing _ _ _ _ # sent_id = 4474 # text = Ag, CD14, and the low affinity Fc receptor for IgE, CD23, were inversely regulated during VitD3- and RA-induced monocytic differentiation of human U-937 monoblasts. 1 Ag ag PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 affinity affinity NOUN NN Number=Sing _ _ _ _ 9 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inversely inversely ADV RB _ _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 937 937 NUM CD NumType=Card _ _ _ _ 33 monoblasts monoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4475 # text = PMA induced the expression of both CD14 and CD23 mRNA and protein. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CD23 CD23 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4476 # text = Exposure to VitD3 rapidly induced the de novo expression of CD14 mRNA and protein. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 4 rapidly rapidly ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 de de PROPN NNP Number=Sing _ _ _ _ 8 novo novo NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4477 # text = The addition of cycloheximide completely blocked the VitD3 induction of CD14 mRNA expression, indicating that the induction was dependent on ongoing protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 5 completely completely ADV RB _ _ _ _ _ 6 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 VitD3 VitD3 NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4478 # text = While inducing CD14 expression, VitD3 concomitantly suppressed the basal, PMA-, and RA-inducible CD23 expression in a dose-dependent manner. 1 While while SCONJ IN _ _ _ _ _ 2 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 3 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 14 14 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 8 concomitantly concomitantly ADV RB _ _ _ _ _ 9 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 basal basal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4479 # text = In contrast, U-937 cells induced by RA strongly increased their expression of CD23 mRNA and protein, whereas they completely lacked detectable CD14 cell surface or mRNA expression. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 937 937 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 RA RA PROPN NNP Number=Sing _ _ _ _ 11 strongly strongly ADV RB _ _ _ _ _ 12 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 23 completely completely ADV RB _ _ _ _ _ 24 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 26 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 14 14 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4480 # text = Furthermore, the VitD3- and the PMA-induced CD14 expression was inhibited as a temporal consequence of the RA-induced differentiation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 VitD3 VitD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 19 consequence consequence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4481 # text = The results suggest that there exists a functional antagonism between VitD3 and RA that may have important implications for the regulation of certain immune and inflammatory responses through their inverse effects on CD14 and CD23 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 there there PRON EX _ _ _ _ _ 6 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 RA Ra PROPN NNP Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 have have VERB VB VerbForm=Inf _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 implications implication NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 certain certain ADJ JJ Degree=Pos _ _ _ _ 24 immune immune ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 inverse inverse NOUN NN Number=Sing _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 14 14 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 CD23 CD23 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4482 # text = Document 003001325 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001325 003001325 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4483 # text = Peripheral blood mononuclear cells isolated from patients with diabetic nephropathy show increased activation of the oxidative-stress sensitive transcription factor NF-kappaB. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 10 nephropathy nephropathy ADJ JJ Degree=Pos _ _ _ _ 11 show show NOUN NN Number=Sing _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 oxidative oxidative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4484 # text = Increased oxidative stress and subsequent activation of the transcription factor NF-kappaB has been linked to the development of late diabetic complications. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 3 stress stress NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 23 complications complication NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4485 # text = To determine whether oxidative stress dependent NF-kappaB activation is evident in patients with diabetic nephropathy we used an Electrophoretic Mobility Shift Assay based semiquantitative detection system which enabled us to determine NF-kappaB activation in ex vivo isolated peripheral blood mononuclear cells. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 5 stress stress NOUN NN Number=Sing _ _ _ _ 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 evident evident ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 17 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 Electrophoretic Electrophoretic PROPN NNP Number=Sing _ _ _ _ 22 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 23 Shift shift PROPN NNP Number=Sing _ _ _ _ 24 Assay assay PROPN NNP Number=Sing _ _ _ _ 25 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 27 detection detection NOUN NN Number=Sing _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 enabled enable VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 determine determine VERB VB VerbForm=Inf _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 ex ex ADJ JJ Degree=Pos _ _ _ _ 40 vivo vivo NOUN NN Number=Sing _ _ _ _ 41 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 43 blood blood NOUN NN Number=Sing _ _ _ _ 44 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4486 # text = We examined 33 patients with diabetes mellitus (Type I and 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 33 33 NUM CD NumType=Card _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 7 mellitus mellitus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 Type type NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ # sent_id = 4487 # text = Type II). 1 Type type NOUN NN Number=Sing _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 4488 # text = Patients with diabetic nephropathy showed higher NF-kappaB binding activity in Electrophoretic Mobility Shift Assays and stronger immunohistological staining for activated NF-kappaBp65 than patients without renal complications. 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 4 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 higher higher ADJ JJR Degree=Cmp _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Electrophoretic Electrophoretic PROPN NNP Number=Sing _ _ _ _ 14 Mobility Mobility PROPN NNP Number=Sing _ _ _ _ 15 Shift shift PROPN NNP Number=Sing _ _ _ _ 16 Assays Assays PROPN NNPS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 19 immunohistological immunohistological ADJ JJ Degree=Pos _ _ _ _ 20 staining staining VERB VBG VerbForm=Ger _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaBp65 kappaBp65 PROPN NNP Number=Sing _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 without without ADP IN _ _ _ _ _ 29 renal renal ADJ JJ Degree=Pos _ _ _ _ 30 complications complication NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4489 # text = NF-kappaB binding activity correlated with the degree of albuminuria (r = 0.316) and with thrombomodulin plasma concentrations (r = 0.33), indicative for albuminuria associated endothelial dysfunction. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 degree degree NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 albuminuria albuminuria NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 r be NOUN NN Number=Sing _ _ _ _ 14 = = SYM SYM _ _ _ _ _ 15 0.316 0.316 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 thrombomodulin thrombomodulin NOUN NN Number=Sing _ _ _ _ 20 plasma plasma NOUN NN Number=Sing _ _ _ _ 21 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 r be NOUN NN Number=Sing _ _ _ _ 24 = = SYM SYM _ _ _ _ _ 25 0.33 0.33 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicative indicative ADJ JJ Degree=Pos _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 albuminuria albuminurion X GW _ _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 33 dysfunction dysfunction NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4490 # text = In a 3 day intervention study in which 600 mg of the antioxidant thioctic acid (alpha-lipoic acid) per day were given to nine patients with diabetic nephropathy oxidative stress in plasma samples was decreased by 48% and NF-kappaB binding activity in ex vivo isolated peripheral blood mononuclear cells by 38%. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ _ 4 day day NOUN NN Number=Sing _ _ _ _ 5 intervention intervention NOUN NN Number=Sing _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 600 600 NUM CD NumType=Card _ _ _ _ 10 mg mg NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 14 thioctic thioctic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 20 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 per per ADP IN _ _ _ _ _ 23 day day NOUN NN Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 given give VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 nine nine NUM CD NumType=Card _ _ _ _ 28 patients patient NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 31 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 32 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 33 stress stress NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 plasma plasma NOUN NN Number=Sing _ _ _ _ 36 samples sample NOUN NNS Number=Plur _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 % % SYM NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 ex ex ADJ JJ Degree=Pos _ _ _ _ 50 vivo vivo NOUN NN Number=Sing _ _ _ _ 51 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 53 blood blood NOUN NN Number=Sing _ _ _ _ 54 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 by by ADP IN _ _ _ _ _ 57 38% 38% SYM NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4491 # text = In conclusion, activation of the transcription factor NF-kappaB in ex vivo isolated peripheral blood mononuclear cells of patients with diabetes mellitus correlates with the degree of diabetic nephropathy. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 ex ex NUM CD NumType=Card _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 patients patient NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 24 mellitus mellitus CCONJ CC _ _ _ _ _ 25 correlates correlate NOUN NNS Number=Plur _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 degree degree NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 31 nephropathy nephropathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4492 # text = NF-kappaB activation is at least in part dependent on oxidative stress since thioctic acid (alpha-lipoic acid) reduced NF-kappaB binding activity. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 at at ADV RB _ _ _ _ _ 7 least least ADV RBS Degree=Sup _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 part part ADJ JJ Degree=Pos _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 13 stress stress NOUN NN Number=Sing _ _ _ _ 14 since since ADP IN _ _ _ _ _ 15 thioctic thioctic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4493 # text = Document 003001326 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001326 003001326 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4494 # text = Induction of NF-kappa B during monocyte differentiation is associated with activation of HIV-gene expression. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4495 # text = Cells of the monocyte-macrophage lineage are important targets of HIV infection. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 7 lineage lineage NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 targets target NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4496 # text = We report here that the phenotypic differentiation of monocyte cell lines induced by phorbol esters or tumour necrosis factor alpha (TNF alpha) is associated with expression of nuclear factor kappa B (NF-kappa B). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 esters ester NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 tumour tumour NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4497 # text = In parallel with such differentiation, HIV transcription, monitored using an HIV long terminal repeat reporter gene construct, is activated in such cells under the influence of enhanced NF-kappa B expression. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 14 long long ADJ JJ Degree=Pos _ _ _ _ 15 terminal terminal NOUN NN Number=Sing _ _ _ _ 16 repeat repeat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4498 # text = Also, in a promonocyte cell line chronically infected with HIV, NF-kappa B expression and HIV transcription were enhanced on stimulation with phorbol ester or TNF alpha. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promonocyte promonocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 chronically chronically ADV RB _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 27 ester ester NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4499 # text = Thus, stimulation of monocyte cell lines by phorbol esters or TNF alpha induces cell differentiation and activates HIV transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 10 esters ester NOUN NNS Number=Plur _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 alpha alpha ADV RB _ _ _ _ _ 14 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4500 # text = Such a process may have fundamental implications in AIDS pathogenesis in vivo and may be important in disease progression induced by opportunistic infections directly or indirectly involving macrophages. 1 Such such DET PDT _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 process process NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 have have VERB VB VerbForm=Inf _ _ _ _ 6 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 7 implications implication NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 AIDS aids NOUN NN Number=Sing _ _ _ _ 10 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 disease disease NOUN NN Number=Sing _ _ _ _ 19 progression progression NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 opportunistic opportunistic ADJ JJ Degree=Pos _ _ _ _ 23 infections infection NOUN NNS Number=Plur _ _ _ _ 24 directly directly ADV RB _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 indirectly indirectly ADV RB _ _ _ _ _ 27 involving involve VERB VBG VerbForm=Ger _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4501 # text = Document 003001327 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001327 003001327 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4502 # text = Hypoxia causes the activation of nuclear factor kappa B through the phosphorylation of I kappa B alpha on tyrosine residues. 1 Hypoxia Hypoxia PROPN NNP Number=Sing _ _ _ _ 2 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X FW Foreign=Yes _ _ _ _ 16 B benefit ADJ JJ Degree=Pos _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4503 # text = The response of mammalian cells to stress is controlled by transcriptional regulatory proteins such as nuclear factor kappa B (NF-kappa B) to induce a wide variety of early response genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 stress stress NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 wide wide ADJ JJ Degree=Pos _ _ _ _ 30 variety variety NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4504 # text = In this report, we show that exposure of cells to hypoxia (0.02% O2) results in I kappa B alpha degradation, increased NF-kappa B DNA binding activity, and transactivation of a reporter gene construct containing two NF-kappa B DNA binding sites. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 0.02 0.02 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 % % SYM NN Number=Sing _ _ _ _ 16 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 results result NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa X GW _ _ _ _ _ 22 B b X GW _ _ _ _ _ 23 alpha alpha X GW _ _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 construct construct NOUN NN Number=Sing _ _ _ _ 42 containing contain VERB VBG VerbForm=Ger _ _ _ _ 43 two two NUM CD NumType=Card _ _ _ _ 44 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 DNA dna NOUN NN Number=Sing _ _ _ _ 49 binding bind VERB VBG VerbForm=Ger _ _ _ _ 50 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4505 # text = Pretreatment of cells with protein tyrosine kinase inhibitors and the dominant negative allele of c-Raf-1 (Raf 301) inhibited I kappa B alpha degradation, NF-kappa B binding, and transactivation of kappa B reporter constructs by hypoxia. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 allele allele NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 Raf Raf NOUN NN Number=Sing _ _ _ _ 22 301 301 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa X FW Foreign=Yes _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ _ 42 reporter reporter NOUN NN Number=Sing _ _ _ _ 43 constructs construct NOUN NNS Number=Plur _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4506 # text = To demonstrate a direct link between changes in the phosphorylation pattern of I kappa B alpha with NF-kappa B activation, we immunoprecipitated I kappa B alpha after varying times of hypoxic exposure and found that its tyrosine phosphorylation status increased during hypoxic exposure. 1 To to PART TO _ _ _ _ _ 2 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 link link NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 pattern pattern NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 immunoprecipitated immunoprecipitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 alpha alpha ADV RB _ _ _ _ _ 30 after after SCONJ IN _ _ _ _ _ 31 varying vary VERB VBG VerbForm=Ger _ _ _ _ 32 times time NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 35 exposure exposure NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 41 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 42 status status NOUN NN Number=Sing _ _ _ _ 43 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 during during ADP IN _ _ _ _ _ 45 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 46 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4507 # text = Inhibition of the transfer of tyrosine phosphoryl groups onto I kappa B alpha prevented I kappa B alpha degradation and NF-kappa B binding. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transfer transfer NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphoryl phosphoryl NOUN NN Number=Sing _ _ _ _ 8 groups group NOUN NNS Number=Plur _ _ _ _ 9 onto onto ADP IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B B PROPN NNP Number=Sing _ _ _ _ 13 alpha alpha ADV RB _ _ _ _ _ 14 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha ADP IN _ _ _ _ _ 19 degradation degradation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4508 # text = In comparison to other activators of NF-kappa B such as phorbol myristate acetate or tumor necrosis factor, we did not detect changes in the tyrosine phosphorylation status of I kappa B alpha following treatment with either of these agents. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 activators activator NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 14 myristate myristate NOUN NN Number=Sing _ _ _ _ 15 acetate acetate NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 detect detect VERB VB VerbForm=Inf _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 status status NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 following follow VERB VBG VerbForm=Ger _ _ _ _ 37 treatment treatment NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 either either CCONJ CC _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4509 # text = These results suggest that tyrosine phosphorylation of I kappa B alpha during hypoxia is an important proximal step which precedes its dissociation and degradation from NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 tyrosine tyrosine PRON PRP _ _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 step step NOUN NN Number=Sing _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 precedes precede VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4510 # text = Document 003001328 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001328 003001328 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4511 # text = NF-kappaB activation is required for C5a-induced interleukin-8 gene expression in mononuclear cells. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a- a- PUNCT : _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4512 # text = C5a, a potent peptide chemoattractant, stimulates interleukin-8 (IL-8) secretion from peripheral blood mononuclear cells (PBMC). 1 C5a C5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent NOUN NN Number=Sing _ _ _ _ 5 peptide peptide NOUN NN Number=Sing _ _ _ _ 6 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 8 8 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4513 # text = Experiments were conducted to understand the mechanisms for C5a-induced IL-8 production, which was 14-fold greater than that in unstimulated cells by 2 hours. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 understand understand VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 a- a- PUNCT , _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 8 8 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 fold fold VERB VB VerbForm=Inf _ _ _ _ 22 greater greater ADJ JJR Degree=Cmp _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4514 # text = IL-8 secretion was accompanied by accumulation of IL-8 mRNA in the cytosol and by nuclear expression of a kappaB DNA binding activity within 30 minutes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 8 8 NUM CD NumType=Card _ _ _ _ 4 secretion secretion NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 8 8 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 within within ADP IN _ _ _ _ _ 28 30 30 NUM CD NumType=Card _ _ _ _ 29 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4515 # text = AP-1 but not NF-IL-6 DNA binding activity was also detected in C5a-stimulated PBMC; however, its delayed expression (maximal at 4 hours) suggested a less important role in the rapid production of IL-8. 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 a- a- PUNCT : _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 26 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 delayed delay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ _ 33 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 less less ADJ JJR Degree=Cmp _ _ _ _ 38 important important ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 43 production production NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4516 # text = The correlation between C5a-induced kappaB binding activity and IL-8 gene expression was examined in the RAW264.7 macrophage cells using reporter genes directed by the kappaB sequence from IkappaBalpha and IL-8 promoter regions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 correlation correlation NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 a- a- PUNCT : _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 264.7 264.7 NUM CD NumType=Card _ _ _ _ 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 8 8 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4517 # text = C5a-induced reporter gene expression was abolished by introducing mutations into the kappaB sites and by coexpression of a dominant negative IkappaBalpha construct resistant to agonist-induced phosphorylation. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 introducing introduce VERB VBG VerbForm=Ger _ _ _ _ 12 mutations mutation NOUN NNS Number=Plur _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 25 construct construct ADJ JJ Degree=Pos _ _ _ _ 26 resistant resistant NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 agonist agonist VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 29 -induced -induce ADJ JJ Degree=Pos _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4518 # text = Pertussis toxin, which ADP-ribosylates the Gi proteins known to couple to the C5a receptor, produced minimal inhibition of C5a-induced IL-8 expression and had little effect on C5a-induced calcium mobilization in RAW264.7 cells. 1 Pertussis Pertussis PROPN NNP Number=Sing _ _ _ _ 2 toxin toxin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 ADP ADP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 ribosylates ribosylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Gi gi PROPN NNP Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 couple couple NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 a- a- PUNCT , _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 8 8 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 little little ADJ JJ Degree=Pos _ _ _ _ 34 effect effect NOUN NN Number=Sing _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 a- a- PUNCT : _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 calcium calcium NOUN NN Number=Sing _ _ _ _ 40 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 264.7 264.7 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4519 # text = These results suggest that NF-kappaB activation is required for C5a-induced IL-8 gene expression and that this response is mediated primarily through a pertussis toxin-insensitive pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 a- a- PUNCT : _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 primarily primarily ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 pertussis pertussis NOUN NN Number=Sing _ _ _ _ 30 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 33 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4520 # text = Document 003001329 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001329 003001329 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4521 # text = CIITA-induced occupation of MHC class II promoters is independent of the cooperative stabilization of the promoter-bound multi-protein complexes. 1 CIITA CIITa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 occupation occupation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 independent independent ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 15 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bound bound ADJ JJ Degree=Pos _ _ _ _ 21 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 22 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4522 # text = Precise regulation of MHC class II expression plays a crucial role in the control of the immune response. 1 Precise precise VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 MHC MHC PROPN NNP Number=Sing _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4523 # text = The transactivator CIITA behaves as a master controller of constitutive and inducible MHC class II gene activation, but its exact mechanism of action is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 4 behaves behave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 master master NOUN NN Number=Sing _ _ _ _ 8 controller controller NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 MHC MHC PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 exact exact ADV RB _ _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 action action NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4524 # text = Activation of MHC class II promoters requires binding of at least three distinct multi-protein complexes (RFX, X2BP and NF-Y). 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MHC MHC PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 promoters promoter NOUN NNS Number=Plur _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 at at ADV RB _ _ _ _ _ 11 least least ADV RBS Degree=Sup _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RFX RFX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 X2BP X2BP PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4525 # text = It is known that the stability of this binding results from cooperative interactions between these proteins. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 stability stability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4526 # text = We show here that expression of CIITA in MHC class II- cells triggers occupation of the promoters by these complexes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 triggers trigger NOUN NNS Number=Plur _ _ _ _ 15 occupation occupation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4527 # text = This observation raised the possibility that the effect of CIITA on promoter occupation is mediated by an effect on the cooperative stabilization of the DNA-bound multi-protein complexes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 raised raise VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 occupation occupation NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 22 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 bound bound ADJ JJ Degree=Pos _ _ _ _ 28 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4528 # text = We show, however, that the presence of CIITA does not affect the stability of the higher-order protein complex formed on DNA by RFX, X2BP and NF-Y. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stability stability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 higher higher ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 order order NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 RFX RFX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 X2BP X2BP PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4529 # text = This suggests other mechanisms for CIITA-induced promoter occupancy, such as an effect on chromatin structure leading to increased accessibility of MHC class II promoters. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 occupancy occupancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 18 structure structure NOUN NN Number=Sing _ _ _ _ 19 leading lead VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 accessibility accessibility NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 MHC MHC PROPN NNP Number=Sing _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4530 # text = This ability of CIITA to facilitate promoter occupation is undissociable from its transactivation potential. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 occupation occupation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 undissociable undissociable ADJ JJ Degree=Pos _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 14 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4531 # text = Finally, we conclude that this effect of CIITA is cell-type specific, since expression of CIITA is not required for normal occupation of MHC class II promoters in B lymphocytes. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 since since ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 occupation occupation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 MHC MHC PROPN NNP Number=Sing _ _ _ _ 28 class class NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4532 # text = Document 003001330 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001330 003001330 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4533 # text = Activation of distinct transcription factors in neutrophils by bacterial LPS, interferon-gamma, and GM-CSF and the necessity to overcome the action of endogenous proteases. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 10 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF CSF PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 necessity necessity NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 29 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4534 # text = Human neutrophils can be induced to actively transcribe a number of early-response genes, in particular those encoding cytokines, chemokines, and the high-affinity surface receptor for IgG, FcgammaRI. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 actively actively ADV RB _ _ _ _ _ 8 transcribe transcribe VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 number number NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 response response NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ _ 19 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 20 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 affinity affinity NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4535 # text = Although little is known to date about the regulation of gene transcription in neutrophils, several indications point to a role for distinct transcription factors, such as members of the NF-kappaB and STAT families. 1 Although although SCONJ IN _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 date date NOUN NN Number=Sing _ _ _ _ 7 about about ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 indications indication NOUN NNS Number=Plur _ _ _ _ 18 point point VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 members member NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 STAT Stat PROPN NNP Number=Sing _ _ _ _ 37 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4536 # text = In this study, we investigated whether these transcription factors become activated under stimulatory conditions which are known to induce gene transcription in neutrophils. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 15 conditions condition NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4537 # text = Unexpectedly, we found that conventional procedures employed to prepare cellular extracts cause the release of proteolytic activities that are normally stored in intracellular granules, resulting in the degradation of various NF-kappaB/Rel and STAT proteins. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 7 procedures procedure NOUN NNS Number=Plur _ _ _ _ 8 employed employ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 prepare prepare VERB VB VerbForm=Inf _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 cause cause SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 release release NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 stored store VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 25 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 resulting result VERB VBG VerbForm=Ger _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 degradation degradation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 various various ADJ JJ Degree=Pos _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Rel Rel PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4538 # text = To circumvent this problem, we developed an alternative procedure which allowed us to show that in neutrophils, LPS and TNFalpha induce a NF-kappaB DNA-binding activity which essentially consists of p50/RelA dimers, and that IFNgamma promotes the binding of STAT1 homodimers to the IFNgamma response region of the FcgammaRI promoter. 1 To to PART TO _ _ _ _ _ 2 circumvent circumvent VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 problem problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 10 procedure procedure NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 show show VERB VB VerbForm=Inf _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 essentially essentially ADV RB _ _ _ _ _ 34 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 37 RelA RelA NOUN NN Number=Sing _ _ _ _ 38 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 43 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 binding binding NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 48 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 52 response response NOUN NN Number=Sing _ _ _ _ 53 region region NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ _ 57 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4539 # text = Moreover, we report that neutrophil stimulation with GM-CSF results in the formation of a STAT5-containing DNA-binding activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 results result NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 STAT5 STAT5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 containing containing VERB VBG VerbForm=Ger _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4540 # text = Collectively, the current findings open new perspectives about mechanisms that are likely to regulate gene transcription in neutrophils. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 current current ADJ JJ Degree=Pos _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 open open ADJ JJ Degree=Pos _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 perspectives perspective NOUN NNS Number=Plur _ _ _ _ 9 about about ADP IN _ _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 likely likely ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4541 # text = In addition, the procedure described herein could prove useful in other cell types that express high levels of endogenous proteases. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 procedure procedure NOUN NN Number=Sing _ _ _ _ 6 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 herein herein ADV RB _ _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 prove prove VERB VB VerbForm=Inf _ _ _ _ 10 useful useful ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 types type NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 21 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4542 # text = Document 003001331 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001331 003001331 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4543 # text = Low CD3+CD28-induced interleukin-2 production correlates with decreased reactive oxygen intermediate formation in neonatal T cells. 1 Low low ADV RB Degree=Pos _ _ _ _ 2 CD3+CD28-induced CD3+CD28-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 correlates correlate NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 11 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 12 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4544 # text = The capacity of neonatal T cells to secrete interleukin-2 (IL-2) has been reported to be variable. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 capacity capacity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 secrete secrete VERB VB VerbForm=Inf _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 variable variable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4545 # text = We analysed IL-2 production in purified neonatal and adult T cells using polyclonal activator phorbol ester + calcium ionophore (PDBu + iono) or receptor-mediated anti-CD3/anti-CD3+ anti-CD28 stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 purified purified ADJ JJ Degree=Pos _ _ _ _ 9 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 adult adult ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 ester ester NOUN NN Number=Sing _ _ _ _ 19 + + SYM SYM _ _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ _ 21 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 PDBu PDBu NOUN NN Number=Sing _ _ _ _ 24 + + SYM SYM _ _ _ _ _ 25 iono iono NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 receptor- receptor- SYM NFP _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 anti-CD3/anti-CD3 anti-CD3/anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 + + SYM SYM _ _ _ _ _ 32 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4546 # text = PDBu + iono induced equally high IL-2 levels in both groups and, when stimulated with plate-bound anti-CD3 monoclonal antibody (mAb), the IL-2 secretion by neonatal cells was undetectable and adult cells produced low amounts of IL-2 (mean 331 +/- 86 pg/ml). 1 PDBu PDBu PROPN NNP Number=Sing _ _ _ _ 2 + + SYM SYM _ _ _ _ _ 3 iono iono ADV RB _ _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 equally equally ADV RB _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 groups group NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 plate plate NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 23 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 secretion secretion NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 adult adult ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 amounts amount NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 2 2 NUM CD NumType=Card _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 mean mean VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 51 331 331 NUM CD NumType=Card _ _ _ _ 52 +/- +/- SYM SYM _ _ _ _ _ 53 86 86 NUM CD NumType=Card _ _ _ _ 54 pg/ml pg/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 4547 # text = The addition of anti-CD28 mAb to anti-CD3-stimulated cells markedly increased IL-2 production in both cell types, but levels of IL-2 in neonatal T cells remained clearly lower than those of adult T cells (respective mean values: 385 +/- 109 pg/ml and 4494 +/- 1199 pg/ml). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 5 mAb mAb PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -stimulated -stimulated ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 markedly markedly ADV RB _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 29 T T PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 clearly clearly ADV RB _ _ _ _ _ 33 lower lower ADJ JJR Degree=Cmp _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 adult adult ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 respective respective ADJ JJ Degree=Pos _ _ _ _ 42 mean mean NOUN NN Number=Sing _ _ _ _ 43 values value NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 : : PUNCT : _ _ _ _ _ 45 385 385 NUM CD NumType=Card _ _ _ _ 46 +/- +/- SYM SYM _ _ _ _ _ 47 109 109 NUM CD NumType=Card _ _ _ _ 48 pg/ml pg/ml NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 4494 4494 NUM CD NumType=Card _ _ _ _ 51 +/- +/- SYM SYM _ _ _ _ _ 52 1199 1199 NUM CD NumType=Card _ _ _ _ 53 pg/ml pg/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4548 # text = As NF-kappa B is a critical transcription factor in the control of IL-2 expression, we next analysed its nuclear translocation in neonatal and adult T cells using the electrophoretic mobility shift assay and, because induction of reactive oxygen intermediates (ROI) is required for the activation of NF-kappa B, we also analysed levels of intracellular ROI in these cells using the ROI-reactive fluorochrome DCFH-DA and flow cytometry. 1 As as ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 next next ADV RB _ _ _ _ _ 22 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 translocation translocation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 adult adult ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 using use VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 35 mobility mobility NOUN NN Number=Sing _ _ _ _ 36 shift shift NOUN NN Number=Sing _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 because because SCONJ IN _ _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 44 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 45 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 kappa kappa PROPN NNP Number=Sing _ _ _ _ 58 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 61 also also ADV RB _ _ _ _ _ 62 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 63 levels level NOUN NNS Number=Plur _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 66 ROI ROI NOUN NNS Number=Plur _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ _ 70 using use VERB VBG VerbForm=Ger _ _ _ _ 71 the the DET DT Definite=Def|PronType=Art _ _ _ _ 72 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 74 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 75 fluorochrome fluorochrome NOUN NN Number=Sing _ _ _ _ 76 DCFH DCFh NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 DA da NOUN NN Number=Sing _ _ _ _ 79 and and CCONJ CC _ _ _ _ _ 80 flow flow NOUN NN Number=Sing _ _ _ _ 81 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 . . PUNCT . _ _ _ _ _ # sent_id = 4549 # text = In neonatal T cells NF-kappa B activation and ROI formation after anti-CD3 stimulation were low compared with adult T cells and, although addition of anti-CD28 mAb increased induction of NF-kappa B and ROI formation, levels similar to those of adults were not achieved. 1 In in ADP IN _ _ _ _ _ 2 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ROI Roi NOUN NN Number=Sing _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 low low ADJ JJ Degree=Pos _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 adult adult NOUN NN Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 although although SCONJ IN _ _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 29 mAb mAb PROPN NNP Number=Sing _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 induction induction NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 ROI Roi PROPN NNP Number=Sing _ _ _ _ 39 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 similar similar ADJ JJ Degree=Pos _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 adults adult NOUN NNS Number=Plur _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4550 # text = After PDBu + iono stimulation, the cells showed similar ROI formation and IL-2 secretion. 1 After after SCONJ IN _ _ _ _ _ 2 PDBu PDBu PROPN NNP Number=Sing _ _ _ _ 3 + + SYM SYM _ _ _ _ _ 4 iono iono ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 ROI Roi NOUN NN Number=Sing _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4551 # text = Our results suggest that reduced IL-2 production by neonatal T cells is specific for anti-CD3 and anti-CD3+ anti-CD28-mediated stimulation and that these activators cannot effectively activate the ROI-NF-kappa B signalling pathway in neonatal T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 activators activator NOUN NNS Number=Plur _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 29 not not PART RB _ _ _ _ _ 30 effectively effectively ADV RB _ _ _ _ _ 31 activate activate VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ROI Roi NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 40 pathway pathway NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4552 # text = Document 003001332 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001332 003001332 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4553 # text = Aspirin inhibits nuclear factor-kappa B mobilization and monocyte adhesion in stimulated human endothelial cells. 1 Aspirin aspirin PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4554 # text = BACKGROUND: The induction of vascular cell adhesion molecule-1 (VCAM-1) and E-selectin by tumor necrosis factor-alpha (TNF) is mediated by mobilization of the transcription factor nuclear factor-kappa B (NF-kappa B). 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 E- E- PUNCT : _ _ _ _ SpaceAfter=No 19 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4555 # text = Since salicylates have been reported to inhibit NF-kappa B activation by preventing the degradation of its inhibitor 1 Since since SCONJ IN _ _ _ _ _ 2 salicylates salicylate NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 4556 # text = I kappa B, we studied a potential inhibition of this pathway by acetylsalicylate (aspirin) in human umbilical vein endothelial cells (HUVECs). 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 acetylsalicylate acetylsalicylate NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 21 vein vein NOUN NN Number=Sing _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4557 # text = METHODS AND RESULTS: Gel-shift analyses demonstrated dose-dependent inhibition of TNF-induced NF-kappa B mobilization by aspirin at concentrations ranging from 1 to 10 mmol/L. 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Gel- Gel- SYM NFP _ _ _ _ SpaceAfter=No 6 shift shift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 analyses analysis NOUN NNS Number=Plur _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 26 ranging range VERB VBG VerbForm=Ger _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 10 10 NUM CD NumType=Card _ _ _ _ 31 mmol/ mmol/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 32 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4558 # text = Induction of VCAM-1 and E-selectin surface expression by TNF was dose-dependently reduced by aspirin over the same range, while induction of intercellular adhesion molecule-1 (ICAM-1) was hardly affected. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 E- E- SYM SYM _ _ _ _ SpaceAfter=No 8 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 dependently dependently ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 20 over over ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 same same ADJ JJ Degree=Pos _ _ _ _ 23 range range NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 X LS _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 hardly hardly ADV RB _ _ _ _ _ 40 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4559 # text = Aspirin appeared to prevent VCAM-1 transcription, since it dose-dependently inhibited induction of VCAM-1 mRNA by TNF. 1 Aspirin aspirin PROPN NNP Number=Sing _ _ _ _ 2 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 5 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 since since SCONJ IN _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 dose dose VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependently dependently ADV RB _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4560 # text = As a functional consequence, adhesion of U937 monocytes to TNF-stimulated HUVECs was markedly reduced by aspirin due to suppression of VCAM-1 and E-selectin upregulation. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 20 due due ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 suppression suppression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 VCAM VCAM NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 E- E- SYM SYM _ _ _ _ SpaceAfter=No 29 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 30 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4561 # text = These effects of aspirin were not related to the inhibition of cyclooxygenase activity, since indomethacin was ineffective. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 related related ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 since since SCONJ IN _ _ _ _ _ 16 indomethacin indomethacin NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4562 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4563 # text = Our data suggest that aspirin inhibits NF-kappa B mobilization, induction of VCAM-1 and E-selectin, and subsequent monocyte adhesion in endothelial cells stimulated by TNF, thereby providing an additional mechanism for therapeutic effects of aspirin. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 aspirin aspirin ADJ JJ Degree=Pos _ _ _ _ 6 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 thereby thereby ADV RB _ _ _ _ _ 33 providing provide VERB VBG VerbForm=Ger _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 additional additional ADJ JJ Degree=Pos _ _ _ _ 36 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 39 effects effect NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4564 # text = Document 003001333 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001333 003001333 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4565 # text = T-cell functional regions of the human IL-3 proximal promoter. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4566 # text = The human interleukin-3 (IL-3) gene is expressed almost exclusively in activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 almost almost ADV RB _ _ _ _ _ 15 exclusively exclusively ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4567 # text = Its expression is regulated at both the transcriptional and post-transcriptional level. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 post post X AFX _ _ _ _ SpaceAfter=No 11 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4568 # text = We have previously shown that treatment of Jurkat T cells with phytohemaglutinin (PHA) and the phorbol ester, PMA, activated transcription initiation from the IL-3 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phytohemaglutinin phytohemaglutinin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 initiation initiation NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4569 # text = To define the regions of the gene required for transcription activation, we generated a series of reporter constructs containing different regions of the IL-3 gene 5' and 3' flanking sequences. 1 To to PART TO _ _ _ _ _ 2 define define VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 series series NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 constructs construct NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 regions region NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ' ' NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' PUNCT `` _ _ _ _ _ 34 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4570 # text = Both positive and negative regulatory elements were identified in the proximal 5' flanking region of the IL-3 gene. 1 Both both CCONJ CC _ _ _ _ _ 2 positive positive ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4571 # text = The promoter region between -173 and -60 contained the strongest activating elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 173 173 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 13 activating activating NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4572 # text = The transcription factor AP-1 could bind to this positive activator region of the promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 positive positive ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4573 # text = We also examined the function of the IL-3 CK-1/CK-2 elements that are present in many cytokine genes and found that they acted as a repressor of basal level expression when cloned upstream of a heterologous promoter but were also inducible by PMA/PHA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1/CK -1/ck NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 elements element NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 many many ADJ JJ Degree=Pos _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 27 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 repressor repressor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 basal basal ADJ JJ Degree=Pos _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 when when ADV WRB PronType=Int _ _ _ _ 36 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 upstream upstream NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ _ 42 but but CCONJ CC _ _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 also also ADV RB _ _ _ _ _ 45 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 PHA. PHA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4574 # text = Document 003001334 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001334 003001334 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4575 # text = Negative regulation of human immunodeficiency virus type 1 expression in monocytes: role of the 65-kDa plus 50-kDa NF-kappa B dimer. 1 Negative negative ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kDa kDa NOUN NN Number=Sing _ _ _ _ 19 plus plus CCONJ CC _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 kDa kDa PROPN NNP Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 dimer dimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4576 # text = Although monocytic cells can provide a reservoir for viral production in vivo, their regulation of human immunodeficiency virus type 1 (HIV-1) transcription can be either latent, restricted, or productive. 1 Although although SCONJ IN _ _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 provide provide VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 either either ADV RB _ _ _ _ _ 31 latent latent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 productive productive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4577 # text = These differences in gene expression have not been molecularly defined. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 molecularly molecularly ADV RB _ _ _ _ _ 10 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4578 # text = In THP-1 cells with restricted HIV expression, there is an absence of DNA-protein binding complex formation with the HIV-1 promoter-enhancer associated with markedly less viral RNA production. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 there there PRON EX _ _ _ _ _ 12 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 complex complex ADJ JJ Degree=Pos _ _ _ _ 21 formation formation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 markedly markedly ADV RB _ _ _ _ _ 33 less less ADV RBR Degree=Cmp _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 RNA RNa PROPN NNP Number=Sing _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4579 # text = This absence of binding was localized to the NF-kappa B region of the HIV-1 enhancer; the 65-kDa plus 50-kDa NF-kappa B heterodimer was preferentially lost. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kDa kDa NOUN NN Number=Sing _ _ _ _ 25 plus plus CCONJ CC _ _ _ _ _ 26 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kDa kDa NOUN NN Number=Sing _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 preferentially preferentially ADV RB _ _ _ _ _ 36 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4580 # text = Adding purified NF-kappa B protein to nuclear extracts from cells with restricted expression overcomes this lack of binding. 1 Adding add AUX VBG VerbForm=Ger _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 overcomes overcome VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4581 # text = In addition, treatment of these nuclear extracts with sodium deoxycholate restored their ability to form the heterodimer, suggesting the presence of an inhibitor of NF-kappa B activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 sodium sodium NOUN NN Number=Sing _ _ _ _ 11 deoxycholate deoxycholate NOUN NN Number=Sing _ _ _ _ 12 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 form form VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4582 # text = Furthermore, treatment of nuclear extracts from these cells that had restricted expression with lipopolysaccharide increased viral production and NF-kappa B activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 extracts extract NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4583 # text = Antiserum specific for NF-kappa B binding proteins, but not c-rel-specific antiserum, disrupted heterodimer complex formation. 1 Antiserum Antiserum PROPN NNP Number=Sing _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 rel-specific rel-specific ADJ JJ Degree=Pos _ _ _ _ 15 antiserum antiserum NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4584 # text = Thus, both NF-kappa B-binding complexes are needed for optimal viral transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4585 # text = Binding of the 65-kDa plus 50-kDa heterodimer to the HIV-1 enhancer can be negatively regulated in monocytes, providing one mechanism restricting HIV-1 gene expression. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kDa kDa NOUN NN Number=Sing _ _ _ _ 7 plus plus CCONJ CC _ _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 negatively negatively ADV RB _ _ _ _ _ 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 providing provid VERB VBG VerbForm=Ger _ _ _ _ 26 one one NUM CD NumType=Card _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 28 restricting restrict VERB VBG VerbForm=Ger _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4586 # text = Document 003001335 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001335 003001335 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4587 # text = Cooperation of binding sites for STAT6 and NF kappa B/rel in the IL-4-induced up-regulation of the human IgE germline promoter. 1 Cooperation cooperation NOUN NN Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 rel rel NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 IgE Ige NOUN NN Number=Sing _ _ _ _ 27 germline germline NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4588 # text = Ig heavy chain class switching is directed by cytokines inducing transcription from unrearranged CH genes. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 switching switching VERB VBG VerbForm=Ger _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 14 CH Ch NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4589 # text = Subsequently, such primed cells can undergo switch recombination to express the selected new isotype. 1 Subsequently subsequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 primed prim ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 undergo undergo ADV RB _ _ _ _ _ 8 switch switch VERB VB VerbForm=Inf _ _ _ _ 9 recombination recombination NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 express express VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 new new ADJ JJ Degree=Pos _ _ _ _ 15 isotype isotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4590 # text = In the case of IgE class switching, IL-4 activates the IgE germline promoter by inducing the interaction of the transcription factor STAT6 (IL-4STAT) with a responsive DNA element in the proximal region of the promoter. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 case case NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 switching switching VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 activates activate NOUN NNS Number=Plur _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IgE Ige PROPN NNP Number=Sing _ _ _ _ 15 germline germline NOUN NN Number=Sing _ _ _ _ 16 promoter promoter ADV RB _ _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4STAT 4stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4591 # text = This study describes the characterization of two additional cis-acting elements that interact with members of the NF kappa B/rel transcription factor family in an IL-4-independent fashion. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 additional additional ADJ JJ Degree=Pos _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 members member NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 rel rel NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 independent independent ADJ JJ Degree=Pos _ _ _ _ 33 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4592 # text = Electrophoretic mobility shift assays show that the nucleoprotein complex formed on the upstream site (NF kappa B1) contains the classical p50/p65 heterodimer. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B1 B1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 classical classical ADJ JJ Degree=Pos _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 p65 p65 NUM CD NumType=Card _ _ _ _ 26 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4593 # text = The complex on the proximal site (NF kappa B2) appears to be composed of p50 and relB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complex complex NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B2 b2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 p50 p50 NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 relB relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4594 # text = IgE germline promoter reporter gene constructs carrying point mutations in the NF kappa B2 site were largely unresponsive to IL-4 stimulation in transient transfection experiments, while plasmids with similar mutations in the NF kappa B1 site responded to cytokine stimulation better than the wild-type promoter. 1 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 2 germline germline NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 8 point point NOUN NN Number=Sing _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B2 B2 NUM CD NumType=Card _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 largely largely ADV RB _ _ _ _ _ 18 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transient transient ADJ JJ Degree=Pos _ _ _ _ 26 transfection transfection NOUN NN Number=Sing _ _ _ _ 27 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 similar similar ADJ JJ Degree=Pos _ _ _ _ 33 mutations mutation NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B1 B1 PROPN NNP Number=Sing _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ _ 40 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 43 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 44 better better ADJ JJR Degree=Cmp _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 type type NOUN NN Number=Sing _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4595 # text = The NF kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 4596 # text = B2 effect was dependent on the presence of the STAT6 binding site, demonstrating that the NF kappa B2 motif is necessary but not sufficient for mediating cytokine up-regulation. 1 B2 B2 NUM CD NumType=Card _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 STAT6 Stat6 NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B2 b2 NUM CD NumType=Card _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 28 cytokine cytokine PRON PRP _ _ _ _ _ 29 up up ADP RP _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4597 # text = In addition, the combination of a NF kappa B/rel binding site and the STAT6 response element conferred IL-4 inducibility to a heterologous minimal promoter, while the individual sites had no effect. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combination combination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 rel rel X FW Foreign=Yes _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 28 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 while while SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 individual individual ADJ JJ Degree=Pos _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 no no DET DT _ _ _ _ _ 37 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4598 # text = The available data suggest that the NF kappa B2 nucleoprotein complex may cooperate with DNA-bound STAT6 to achieve IL-4-dependent activation of the human IgE germline gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 available available ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B2 B2 NUM CD NumType=Card _ _ _ _ 10 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 bound bound ADJ JJ Degree=Pos _ _ _ _ 18 STAT6 Stat6 NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 achieve achieve VERB VB VerbForm=Inf _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IgE Ige NOUN NN Number=Sing _ _ _ _ 31 germline germline NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4599 # text = Document 003001336 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001336 003001336 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4600 # text = Interferons inhibit activation of STAT6 by interleukin 4 in human monocytes by inducing SOCS-1 gene expression. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 interleukin interleukin ADV RB _ _ _ _ _ 8 4 4 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 14 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4601 # text = Interferons (IFNs) inhibit induction by IL-4 of multiple genes in human monocytes. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IFNs IFNs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4602 # text = However, the mechanism by which IFNs mediate this inhibition has not been defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 8 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4603 # text = IL-4 activates gene expression by inducing tyrosine phosphorylation, homodimerization, and nuclear translocation of the latent transcription factor, STAT6 (signal transducer and activator of transcription-6). 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 homodimerization homodimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 latent latent ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 STAT6 Stat6 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transducer transducer NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4604 # text = STAT6-responsive elements are characteristically present in the promoters of IL-4-inducible genes. 1 STAT6 STAT6 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -responsive -responsive ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 characteristically characteristically ADV RB _ _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4605 # text = Because STAT6 activation is essential for IL-4-induced gene expression, we examined the ability of type I and type II IFNs to regulate activation of STAT6 by IL-4 in primary human monocytes. 1 Because because SCONJ IN _ _ _ _ _ 2 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 4 4 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 primary primary ADJ JJ Degree=Pos _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4606 # text = Pretreatment of monocytes with IFN-beta or IFN-gamma, but not IL-1, IL-2, macrophage colony-stimulating factor, granulocyte/macrophage colony-stimulating factor, IL-6, or transforming growth factor beta suppressed activation of STAT6 by IL-4. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 IL Il ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 32 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 43 growth growth NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 beta beof NOUN NN Number=Sing _ _ _ _ 46 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4607 # text = This inhibition was associated with decreased tyrosine phosphorylation and nuclear translocation of STAT6 and was not evident unless the cells were preincubated with IFN for at least 1 hr before IL-4 stimulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 evident evident ADJ JJ Degree=Pos _ _ _ _ 18 unless unless SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 at at ADV RB _ _ _ _ _ 27 least least ADV RBS Degree=Sup _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 hr hr NOUN NN Number=Sing _ _ _ _ 30 before before ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4608 # text = Furthermore, inhibition by IFN could be blocked by cotreatment with actinomycin D and correlated temporally with induction of the JAK/STAT inhibitory gene, SOCS-1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing|Typo=Yes _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IFN IFN PROPN NNP Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cotreatment cotreatment NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 13 D d NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 temporally temporally ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 STAT Stat PROPN NNP Number=Sing _ _ _ _ 24 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 SOCS SOCS NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4609 # text = Forced expression of SOCS-1 in a macrophage cell line, RAW264, markedly suppressed trans-activation of an IL-4-inducible reporter as well as IL-6- and IFN-gamma-induced reporter gene activity. 1 Forced forced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 RAW264 RAW264 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 markedly markedly ADV RB _ _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 -gamma -gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4610 # text = These findings demonstrate that IFNs inhibit IL-4-induced activation of STAT6 and STAT6-dependent gene expression, at least in part, by inducing expression of SOCS-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 6 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT6 Stat6 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 STAT6 Stat6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 at at ADV RB _ _ _ _ _ 22 least least ADV RBS Degree=Sup _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 by by SCONJ IN _ _ _ _ _ 27 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4611 # text = Document 003001337 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001337 003001337 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4612 # text = Protein kinase C is not a downstream effector of p21ras in activated T cells. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 8 effector effector NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4613 # text = The aim of this present study was to investigate the role of protein kinase C (PKC), downstream of p21ras, in activating interleukin-2 (IL-2) gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 in in SCONJ IN _ _ _ _ _ 25 activating activat VERB VBG VerbForm=Ger _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4614 # text = It has been reported that PKC is an effector of p21ras in T cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 PKC PKC PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 effector effector NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4615 # text = Data is presented, using the potent and selective PKC inhibitor Ro 31-8425 and transient expression of a constitutively active ras mutant, which clearly shows that PKC is not downstream of p21ras in the induction of NF-AT and AP-1 transcriptional activity and in the expression of IL-2 in human Jurkat T cells. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 11 inhibitor inhibitor ADP IN _ _ _ _ _ 12 Ro Ro PROPN NNP Number=Sing _ _ _ _ 13 31- 31- SYM SYM _ _ _ _ SpaceAfter=No 14 8425 8425 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 constitutively constitutively ADV RB _ _ _ _ _ 21 active active ADJ JJ Degree=Pos _ _ _ _ 22 ras ra NOUN NNS Number=Plur _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 clearly clearly ADV RB _ _ _ _ _ 27 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 PKC PKC PROPN NNP Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 induction induction NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT at PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 2 2 NUM CD NumType=Card _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 human human ADJ JJ Degree=Pos _ _ _ _ 58 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 59 T t PROPN NNP Number=Sing _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 4616 # text = Reporter gene experiments demonstrated that NF-kappa B transcriptional activity is not affected by expression of activated p21ras. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4617 # text = The signaling pathways involving PKC activation, calcium mobilization and ras activation combine to provide the necessary components for production of IL-2 during T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 involving involve VERB VBG VerbForm=Ger _ _ _ _ 5 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ _ 9 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ras ras NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 combine combine NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 components component NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 T t NUM CD NumType=Card _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4618 # text = Document 003001338 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001338 003001338 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4619 # text = Non-steroidal anti-inflammatory drugs inhibit the expression of cytokines and induce HSP70 in human monocytes. 1 Non-steroidal Non-steroidal ADJ JJ Degree=Pos _ _ _ _ 2 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 induce induce ADJ JJ Degree=Pos _ _ _ _ 11 HSP70 HSP70 NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4620 # text = Recent studies have shown that the non-steroidal anti-inflammatory drugs (NSAIDs) activate heat shock transcription factor (HSF1) from a latent cytoplasmic form to a nuclear, DNA binding state. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 non-steroidal non-steroidal ADJ JJ Degree=Pos _ _ _ _ 8 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 drugs drug NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 activate activate ADJ JJ Degree=Pos _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HSF1 Hsf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 latent latent ADJ JJ Degree=Pos _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4621 # text = As HSF1 can function as both an activator of heat shock genes and a repressor of non-heat shock genes such as IL1B and c- fos, we have examined the potential role of HSF1 in the effects of NSAIDs on gene expression in a human monocytic cell line THP-1. 1 As as SCONJ IN _ _ _ _ _ 2 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 function function VERB VB VerbForm=Inf _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 non non X AFX _ _ _ _ SpaceAfter=No 18 -heat -heat ADJ JJ Degree=Pos _ _ _ _ 19 shock shock NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 such such ADJ JJ Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 IL1B Il1b NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ _ 27 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 potential potential ADJ JJ Degree=Pos _ _ _ _ 34 role role NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 HSF1 HSF1 NUM CD NumType=Card _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 effects effect NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 line line NOUN NN Number=Sing _ _ _ _ 51 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4622 # text = We found that two members of the NSAIDs, sodium salicylate and sulindac repress the IL1B promoter to similar degree to heat shock or HSF1 overexpression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NSAIDs Nsaids PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 sodium sodium ADJ JJ Degree=Pos _ _ _ _ 11 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 sulindac sulindac NOUN NN Number=Sing _ _ _ _ 14 repress repress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL1B Il1b PROPN NNP Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 similar similar ADJ JJ Degree=Pos _ _ _ _ 20 degree degree NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 heat heat NOUN NN Number=Sing _ _ _ _ 23 shock shock NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 HSF1 Hsf1 NUM CD NumType=Card _ _ _ _ 26 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4623 # text = In addition, sodium salicylate and additional NSAIDs used at concentrations that activate HSF1 also inhibited the expression of other monocytic genes (TNF-alpha, IL-1beta, IL-6, IL-8, IL-10, ICAM-1) activated by exposure to a pro-inflammatory stimulus (lipopolysaccharide, LPS). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 additional additional ADJ JJ Degree=Pos _ _ _ _ 8 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 activate activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 exposure exposure NOUN NN Number=Sing _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 55 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 4624 # text = At least in the case of the IL1B promoter, repression did not seem to involve another factor whose activity is affected by the NSAIDs, NFkappaB as the IL1B promoter fragment used in our studies is not NFkappaB responsive and binds specifically to HSF1. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 case case NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL1B IL1B PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 repression repression NOUN NN Number=Sing _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 seem seem VERB VB VerbForm=Inf _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 involve involve VERB VB VerbForm=Inf _ _ _ _ 17 another another DET DT _ _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NSAIDs Nsaids PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL1B Il1b PROPN NNP Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 fragment fragment NOUN NN Number=Sing _ _ _ _ 33 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 36 studies study NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 40 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 binds bind NOUN NNS Number=Plur _ _ _ _ 43 specifically specifically ADV RB _ _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4625 # text = Exposure to NSAIDs had a complex effect on HSP gene expression and while sulindac activated the stress responsive HSP70B promoter, sodium salicylate did not. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 NSAIDs Nsaids PROPN NNP Number=Sing _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 complex complex ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 HSP Hsp NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 sulindac sulindac NOUN NN Number=Sing _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 stress stress NOUN NN Number=Sing _ _ _ _ 18 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 19 HSP70B Hsp70b NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 sodium sodium NOUN NN Number=Sing _ _ _ _ 23 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 24 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4626 # text = In addition, only a subset of the NSAIDs induced HSP70 mRNA species. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 subset subset NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NSAIDs Nsaids PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 HSP70 HSP70 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4627 # text = These findings reflect the properties of HSF1 which can be activated to at least two DNA binding forms only one of which activates heat shock promoters and suggest that individual NSAID family members may differentially induce one or other of these forms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 reflect reflect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 properties property NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 at at ADV RB _ _ _ _ _ 14 least least ADV RBS Degree=Sup _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 forms form NOUN NNS Number=Plur _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 heat heat NOUN NN Number=Sing _ _ _ _ 25 shock shock NOUN NN Number=Sing _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 individual individual ADJ JJ Degree=Pos _ _ _ _ 31 NSAID nsaid NOUN NN Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 members member NOUN NNS Number=Plur _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 differentially differentially ADV RB _ _ _ _ _ 36 induce induce VERB VB VerbForm=Inf _ _ _ _ 37 one one NUM CD NumType=Card _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 other other ADJ JJ Degree=Pos _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4628 # text = Overall therefore, exposure to NSAIDs leads to a profound switch in gene expression in monocytic cells, with suppression of genes involved in macrophage activation and induction of stress genes and HSF1 appears to play a regulatory role in these effects. 1 Overall overall ADV RB _ _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 exposure exposure VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 NSAIDs NSAid PROPN NNP Number=Sing _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 profound profound ADJ JJ Degree=Pos _ _ _ _ 11 switch switch NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 suppression suppression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 stress stress NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 HSF1 Hsf1 NOUN NN Number=Sing _ _ _ _ 34 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 play play VERB VB VerbForm=Inf _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4629 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4630 # text = Document 003001339 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001339 003001339 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4631 # text = Modulation of mRNA expression of a novel human myeloid-selective CCAAT/enhancer binding protein gene (C/EBP epsilon). 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 selective selective ADJ JJ Degree=Pos _ _ _ _ 12 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 EBP EBP PROPN NNP Number=Sing _ _ _ _ 22 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4632 # text = Human C/EBP epsilon is a newly cloned gene coding for a CCAAT/enhancer binding protein that may be involved in the regulation of myeloid differentiation. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 EBP EBP PROPN NNP Number=Sing _ _ _ _ 5 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 newly newly ADV RB _ _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 coding cod VERB VBG VerbForm=Ger _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4633 # text = Our studies showed that levels of C/EBP epsilon mRNA were markedly increased in NB4 cells (promyelocytic leukemia line), because they were induced by 9-cis retinoic acid (9-cis RA) to differentiate towards granulocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 epsilon epsilon ADP IN _ _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 markedly markedly ADV RB _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 because because SCONJ IN _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cis cis NOUN NN Number=Sing _ _ _ _ 32 retinoic retinoic NOUN NN Number=Sing _ _ _ _ 33 acid acid NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 cis cis NOUN NN Number=Sing _ _ _ _ 38 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 42 towards towards ADP IN _ _ _ _ _ 43 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4634 # text = Accumulation of C/EBP epsilon mRNA occurred as early as 1 hour after exposure of NB4 cells to 9-cis RA (5 x 10(-7) mol/L); and at 48 hours, levels were increased by 5.1-fold. 1 Accumulation accumulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 EBP EBP PROPN NNP Number=Sing _ _ _ _ 6 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 as as ADV RB _ _ _ _ _ 10 early early ADV RB Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 hour hour NOUN NN Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 exposure exposure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NB4 NB4 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cis cis NOUN NN Number=Sing _ _ _ _ 23 RA Ra NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 x x SYM SYM _ _ _ _ _ 27 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 (- (- PUNCT . _ _ _ _ SpaceAfter=No 29 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 mol/L mol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 48 48 NUM CD NumType=Card _ _ _ _ 37 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 5.1 5.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4635 # text = Dose-response studies showed that 10(-7) to 10(-6) mol/L 9-cis RA (12 hours) resulted in peak levels of C/EBP epsilon mRNA; but even 10(-10) mol/L 9-cis RA increased levels of these transcripts. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 response response NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 (- (- PUNCT . _ _ _ _ SpaceAfter=No 9 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 (- (- PUNCT . _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 17 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 cis cis NOUN NN Number=Sing _ _ _ _ 20 RA Ra PROPN NNP Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 12 12 NUM CD NumType=Card _ _ _ _ 23 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 peak peak NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 EBP EBP PROPN NNP Number=Sing _ _ _ _ 33 epsilon epsilon ADP IN _ _ _ _ _ 34 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 even even ADV RB _ _ _ _ _ 38 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 (- (- PUNCT . _ _ _ _ SpaceAfter=No 40 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 43 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 cis cis NOUN NN Number=Sing _ _ _ _ 46 RA Ra NOUN NN Number=Sing _ _ _ _ 47 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 levels level NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 51 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4636 # text = NB4 cells pulse-exposed (30 minutes) to all-trans retinoic acid (ATRA), washed, and cultured (3 days) with either dimethylsulfoxide (DMSO) or hexamethylene bisacetamide (HMBA) had a prominent increase in levels of C/EBP epsilon mRNA and an increase in granulocytic differentiation, but exposure to either DMSO or HMBA alone had no effect on base levels of C/EBP epsilon and did not induce differentiation. 1 NB4 NB4 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 pulse pulse ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 exposed exposed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 30 30 NUM CD NumType=Card _ _ _ _ 8 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 trans tran VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 washed wash VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ _ 26 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 either either CCONJ CC _ _ _ _ _ 30 dimethylsulfoxide dimethylsulfoxide NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 hexamethylene hexamethylene NOUN NN Number=Sing _ _ _ _ 36 bisacetamide bisacetamide NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 HMBA HMBA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 43 increase increase NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 EBP EBP PROPN NNP Number=Sing _ _ _ _ 50 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 51 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 increase increase NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 57 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 but but CCONJ CC _ _ _ _ _ 60 exposure exposure NOUN NN Number=Sing _ _ _ _ 61 to to ADP IN _ _ _ _ _ 62 either either CCONJ CC _ _ _ _ _ 63 DMSO DMSO PROPN NNP Number=Sing _ _ _ _ 64 or or CCONJ CC _ _ _ _ _ 65 HMBA HMBA PROPN NNP Number=Sing _ _ _ _ 66 alone alone ADV RB _ _ _ _ _ 67 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 68 no no DET DT _ _ _ _ _ 69 effect effect NOUN NN Number=Sing _ _ _ _ 70 on on ADP IN _ _ _ _ _ 71 base base NOUN NN Number=Sing _ _ _ _ 72 levels level NOUN NNS Number=Plur _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 / / PUNCT , _ _ _ _ SpaceAfter=No 76 EBP EBP PROPN NNP Number=Sing _ _ _ _ 77 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 78 and and CCONJ CC _ _ _ _ _ 79 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 80 not not PART RB _ _ _ _ _ 81 induce induce VERB VB VerbForm=Inf _ _ _ _ 82 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 4637 # text = Macrophage-differentiation of NB4 reduced levels of C/EBP epsilon mRNA. 1 Macrophage Macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NB4 NB4 NUM CD NumType=Card _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP PROPN NNP Number=Sing _ _ _ _ 12 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4638 # text = Nuclear run-off assays and half-life studies showed that accumulation of C/EBP epsilon mRNA by 9-cis RA was due to enhanced transcription. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 -off -off ADJ JJ Degree=Pos _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 life life NOUN NN Number=Sing _ _ _ _ 9 studies study NOUN NNS Number=Plur _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 EBP EBP PROPN NNP Number=Sing _ _ _ _ 17 epsilon epsilon ADP IN _ _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ SpaceAfter=No 22 cis cis NOUN NN Number=Sing _ _ _ _ 23 RA Ra PROPN NNP Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4639 # text = Furthermore, this C/EBP epsilon mRNA accumulation did not require synthesis of new protein factors because 9-cis RA induced C/EBP epsilon mRNA accumulation in the absence of new protein synthesis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 10 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 require require VERB VB VerbForm=Inf _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 cis cis NOUN NN Number=Sing _ _ _ _ 22 RA Ra NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 C/ Cith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 25 EBP EBP PROPN NNP Number=Sing _ _ _ _ 26 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 27 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 28 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 absence absence NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 new new ADJ JJ Degree=Pos _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4640 # text = ATRA also induced expression of C/EBP epsilon protein in NB4 cells, as shown by Western blotting. 1 ATRA ATRA ADV RB _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 EBP EBP PROPN NNP Number=Sing _ _ _ _ 9 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Western western ADJ JJ Degree=Pos _ _ _ _ 19 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4641 # text = In contrast to the increase of C/EBP epsilon in 9-cis RA-mediated granulocytic differentiation, the DMSO-induced differentiation of HL-60 cells down the granulocytic pathway was associated with an initial reduction of C/EBP epsilon mRNA levels. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 cis cis NOUN NN Number=Sing _ _ _ _ 15 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DMSO Dmso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 60 60 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 down down ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 initial initial ADJ JJ Degree=Pos _ _ _ _ 40 reduction reduction NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 EBP EBP PROPN NNP Number=Sing _ _ _ _ 45 epsilon epsilon ADP IN _ _ _ _ _ 46 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 47 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4642 # text = In summary, we have discovered that expression of C/EBP epsilon mRNA is markedly enhanced as the NB4 promyelocytes are induced by retinoids to differentiate towards granulocytes. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 EBP EBP PROPN NNP Number=Sing _ _ _ _ 13 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NB4 Nb4 NOUN NN Number=Sing _ _ _ _ 21 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 28 towards towards ADP IN _ _ _ _ _ 29 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4643 # text = This induction of C/EBP epsilon mRNA expression is transcriptionally mediated and occurs in the absence of synthesis of additional protein factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 transcriptionally transcriptionally ADV RB _ _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 occurs occur NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 absence absence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 additional additional ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4644 # text = We suspect that the C/EBP epsilon promoter/enhancer contains a retinoic acid-response element that is directly stimulated by retinoids. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suspect suspect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 EBP Ebp NOUN NN Number=Sing _ _ _ _ 7 epsilon epsilon ADP IN _ _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 response response NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 directly directly ADV RB _ _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 retinoids retinoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4645 # text = Document 003001340 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001340 003001340 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4646 # text = Ubiquitin-mediated processing of NF-kappa B transcriptional activator precursor p105. 1 Ubiquitin- Ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 processing processing NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activator activator NOUN NN Number=Sing _ _ _ _ 11 precursor precursor NOUN NN Number=Sing _ _ _ _ 12 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4647 # text = Reconstitution of a cell-free system and identification of the ubiquitin-carrier protein, E2, and a novel ubiquitin-protein ligase, E3, involved in conjugation. 1 Reconstitution Reconstitution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 identification identification NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ubiquitin- ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 13 carrier carrier NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 novel novel NOUN NN Number=Sing _ _ _ _ 21 ubiquitin- ubiquitin- PUNCT , _ _ _ _ SpaceAfter=No 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 involved involve ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 conjugation conjugation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4648 # text = In most cases, the transcriptional factor NF-kappa B is a heterodimer consisting of two subunits, p50 and p65, which are encoded by two distinct genes of the Rel family. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 15 consisting consisting NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 p50 p50 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Rel Rel PROPN NNP Number=Sing _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4649 # text = p50 is translated as a precursor of 105 kDa. 1 p50 p50 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 precursor precursor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 105 105 NUM CD NumType=Card _ _ _ _ 9 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4650 # text = The C-terminal domain of the precursor is rapidly degraded, forming the mature p50 subunit consisted of the N-terminal region of the molecule. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 terminal terminal NOUN NN Number=Sing _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 precursor precursor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 rapidly rapidly ADV RB _ _ _ _ _ 10 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 forming form VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4651 # text = The mechanism of generation of p50 is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 generation generation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p50 p50 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4652 # text = It has been suggested that the ubiquitin-proteasome system is involved in the process; however, the specific enzymes involved and the mechanism of limited proteolysis, in which half of the molecule is spared, have been obscure. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 8 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 21 involved involve ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 limited limited ADJ JJ Degree=Pos _ _ _ _ 27 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 half half NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 spared spare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 40 obscure obscure ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4653 # text = Palombella and colleagues (Palombella, V.J., Rando, O.J., Goldberg, A.L., and Maniatis, T.(1994) Cell 78, 773-785) have shown that ubiquitin is required for the processing in a cell-free system of a truncated, artificially constructed, 60-kDa precursor. 1 Palombella Palombella PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 colleagues colleague NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Palombella Palombella PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 V.J. V.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Rando Rando PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 O.J. O.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Goldberg Goldberg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 A.L. A.L. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Maniatis Maniatis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T. T. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 1994 1994 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 Cell cell NOUN NN Number=Sing _ _ _ _ 25 78 78 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 773-785 773-785 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 ubiquitin ubiquitin NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 processing processing NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 free free ADJ JJ Degree=Pos _ _ _ _ 43 system system NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 truncated truncated ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 artificially artificially ADV RB _ _ _ _ _ 49 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 kDa kDa NOUN NN Number=Sing _ _ _ _ 54 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4654 # text = They have also shown that proteasome inhibitors block the processing both in vitro and in vivo. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 proteasome proteasome DET DT _ _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 processing processing NOUN NN Number=Sing _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4655 # text = In this study, we demonstrate reconstitution of a cell-free processing system and demonstrate directly that: (a) the ubiquitin-proteasome system is involved in processing of the intact p105 precursor, (b) conjugation of ubiquitin to the precursor is an essential intermediate step in the processing, (c) the recently discovered novel species of the ubiquitin-carrier protein, E2-F1, that is involved in the conjugation and degradation of p53, is also required for the limited processing of the p105 precursor, and (d) a novel, approximately 320-kDa species of ubiquitin-protein ligase, is involved in the process. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 free free ADJ JJ Degree=Pos _ _ _ _ 13 processing processing NOUN NN Number=Sing _ _ _ _ 14 system system NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 directly directly ADV RB _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 a a X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 25 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 26 system system NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 processing processing NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 intact intact NOUN NN Number=Sing _ _ _ _ 34 p105 p105 NOUN NN Number=Sing _ _ _ _ 35 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 b b X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 ubiquitin ubiquitin NOUN NN Number=Sing _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 precursor precursor NOUN NN Number=Sing _ _ _ _ 46 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 essential essential ADJ JJ Degree=Pos _ _ _ _ 49 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 50 step step NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 processing processing NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 c c X LS _ _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 recently recently ADV RB _ _ _ _ _ 60 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 61 novel novel NOUN NN Number=Sing _ _ _ _ 62 species species NOUN NNS Number=Plur _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 ubiquitin- ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 66 carrier carrier NOUN NN Number=Sing _ _ _ _ 67 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 E2- e2- NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 F1 F1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 73 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 74 involved involved ADJ JJ Degree=Pos _ _ _ _ 75 in in ADP IN _ _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 78 and and CCONJ CC _ _ _ _ _ 79 degradation degradation NOUN NN Number=Sing _ _ _ _ 80 of of ADP IN _ _ _ _ _ 81 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 84 also also ADV RB _ _ _ _ _ 85 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 86 for for ADP IN _ _ _ _ _ 87 the the DET DT Definite=Def|PronType=Art _ _ _ _ 88 limited limited ADJ JJ Degree=Pos _ _ _ _ 89 processing processing NOUN NN Number=Sing _ _ _ _ 90 of of ADP IN _ _ _ _ _ 91 the the DET DT Definite=Def|PronType=Art _ _ _ _ 92 p105 p105 NOUN NN Number=Sing _ _ _ _ 93 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 94 , , PUNCT , _ _ _ _ _ 95 and and CCONJ CC _ _ _ _ _ 96 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 97 d would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 98 ) ) PUNCT -RRB- _ _ _ _ _ 99 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 100 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 101 , , PUNCT , _ _ _ _ _ 102 approximately approximately ADV RB _ _ _ _ _ 103 320 320 NUM CD NumType=Card _ _ _ SpaceAfter=No 104 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 105 kDa kDa NOUN NN Number=Sing _ _ _ _ 106 species species NOUN NNS Number=Plur _ _ _ _ 107 of of ADP IN _ _ _ _ _ 108 ubiquitin-protein ubiquitin-protein ADJ JJ Degree=Pos _ _ _ _ 109 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 110 , , PUNCT , _ _ _ _ _ 111 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 112 involved involved ADJ JJ Degree=Pos _ _ _ _ 113 in in ADP IN _ _ _ _ _ 114 the the DET DT Definite=Def|PronType=Art _ _ _ _ 115 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 116 . . PUNCT . _ _ _ _ _ # sent_id = 4656 # text = This novel enzyme is distinct from E6-AP, the p53-conjugating ligase, and from E3 alpha, the "N-end rule" ligase. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 E6 e6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -conjugating -conjugat VERB VBG VerbForm=Ger _ _ _ _ 14 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 E3 E3 NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 " " PUNCT `` _ _ _ _ SpaceAfter=No 23 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 end end NOUN NN Number=Sing _ _ _ _ 26 rule rule NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 " " PUNCT '' _ _ _ _ _ 28 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4657 # text = Document 003001341 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001341 003001341 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4658 # text = The severe phenotype of females with tiny ring X chromosomes is associated with inability of these chromosomes to undergo X inactivation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 severe severe ADJ JJ Degree=Pos _ _ _ _ 3 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 females female NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 8 ring ring NOUN NN Number=Sing _ _ _ _ 9 X x SYM SYM _ _ _ _ _ 10 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 inability inability NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 undergo undergo VERB VB VerbForm=Inf _ _ _ _ 20 X x ADP IN _ _ _ _ _ 21 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4659 # text = Mental retardation and a constellation of congenital malformations not usually associated with Turner syndrome are seen in some females with a mosaic 45,X/46,X,r(X) karyotype. 1 Mental mental ADJ JJ Degree=Pos _ _ _ _ 2 retardation retardation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 constellation constellation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 congenital congenital ADJ JJ Degree=Pos _ _ _ _ 8 malformations malformation NOUN NNS Number=Plur _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 usually usually ADV RB _ _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Turner Turner NOUN NN Number=Sing _ _ _ _ 14 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 females female NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mosaic mosaic NOUN NN Number=Sing _ _ _ _ 23 45,X 45,X ADP IN _ _ _ _ SpaceAfter=No 24 /46,X /46,X NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ,r ,r NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 X x SYM SYM _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 karyotype karyotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4660 # text = Studies of these females show that the XIST locus on their tiny ring X chromosomes is either not present or not expressed. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 females female NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 XIST Xist NOUN NN Number=Sing _ _ _ _ 9 locus locus NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 13 ring ring NOUN NN Number=Sing _ _ _ _ 14 X x SYM SYM _ _ _ _ _ 15 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 either either ADV RB _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4661 # text = As XIST transcription is well correlated with inactivation of the X chromosome in female somatic cells and spermatogonia, nonexpression of the locus even when it is present suggests that these chromosomes are transcriptionally active. 1 As as ADP IN _ _ _ _ _ 2 XIST Xist ADJ JJS Degree=Sup _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 X x PROPN NNP Number=Sing _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 female female ADJ JJ Degree=Pos _ _ _ _ 15 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 spermatogonia spermatogonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 nonexpression nonexpression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 locus locus NOUN NN Number=Sing _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 when when ADV WRB PronType=Int _ _ _ _ 26 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 27 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 present present ADJ JJ Degree=Pos _ _ _ _ 29 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 transcriptionally transcriptionally ADV RB _ _ _ _ _ 35 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4662 # text = We examined the transcriptional activity of ring X chromosomes lacking XIST expression (XISTE-), from three females with severe phenotypes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ring re NOUN NN Number=Sing _ _ _ _ 8 X X SYM SYM _ _ _ _ _ 9 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 10 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 11 XIST Xist ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 XISTE Xiste NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 females female NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 severe severe ADJ JJ Degree=Pos _ _ _ _ 23 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4663 # text = The two tiny ring X chromosomes studied with an antibody specific for the acetylated isoforms of histone H4 marking transcribed chromatin domains were labeled at a level consistent with their being active. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 4 ring re NOUN NN Number=Sing _ _ _ _ 5 X x SYM SYM _ _ _ _ _ 6 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 acetylated acetylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 histone histone NOUN NN Number=Sing _ _ _ _ 18 H4 H4 NOUN NN Number=Sing _ _ _ _ 19 marking marking NOUN NN Number=Sing _ _ _ _ 20 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 labeled label VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ _ 28 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 being be AUX VBG VerbForm=Ger _ _ _ _ 32 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4664 # text = We also examined tow of the XISTE- ring chromosomes to determine whether genes that are normally silent on an inactive X are expressed from these chromosomes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 tow tow NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XISTE XISTE NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 ring re NOUN NN Number=Sing _ _ _ _ 10 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 determine determine VERB VB VerbForm=Inf _ _ _ _ 13 whether whether SCONJ IN _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 silent silent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 X x NOUN NN Number=Sing _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 chromosomes chromosome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4665 # text = Analyses of hybrid cells show that TIMP, ZXDA, and ZXDB loci on the proximal short arm, and AR and PHKA1 loci on the long arm, are well expressed from the tiny ring X chromosome lacking XIST DNA. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hybrid hybrid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 ZXDA ZXDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ZXDB ZXDB PROPN NNP Number=Sing _ _ _ _ 13 loci loci NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 short short ADJ JJ Degree=Pos _ _ _ _ 18 arm arm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 AR be NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 PHKA1 PHKA1 NUM CD NumType=Card _ _ _ _ 24 loci loci NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 arm arm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 36 ring ring NOUN NN Number=Sing _ _ _ _ 37 X x SYM SYM _ _ _ _ _ 38 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 39 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 40 XIST Xist ADJ JJ Degree=Pos _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4666 # text = Studies of the ring chromosome that has XIST DNA but does not transcribe it show that its AR allele is transcribed along with the one on the normal X allele. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ring ring NOUN NN Number=Sing _ _ _ _ 5 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 XIST Xist NOUN NN Number=Sing _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 transcribe transcribe VERB VB VerbForm=Inf _ _ _ _ 14 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 show show VERB VB VerbForm=Inf _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 AR ar NOUN NN Number=Sing _ _ _ _ 19 allele allele NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 along along ADP IN _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 one one NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 X x NOUN NN Number=Sing _ _ _ _ 30 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4667 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4668 # text = Document 003001342 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001342 003001342 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4669 # text = Inhibition of IL-4-inducible gene expression in human monocytes by type I and type II interferons. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 interferons interferon NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4670 # text = The Th2-type cytokines, interleukin-4 (IL-4) and interleukin-13 (IL-13), induce expression of a distinct subset of genes in human monocytes, including FcepsilonRIIb (CD23), 15-lipoxygenase, IL-1 receptor antagonist (IL-1ra), and type I and type II IL-1 receptors (IL-1R). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 -type -type NOUN NN Number=Sing _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 -13 -13 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 induce induce VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 28 subset subset NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 including include VERB VBG VerbForm=Ger _ _ _ _ 36 FcepsilonRIIb FcepsilonRIIb PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CD23 CD23 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 receptor receptor NOUN NN Number=Sing _ _ _ _ 49 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1ra 1ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 type type NOUN NN Number=Sing _ _ _ _ 58 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 61 II ii NUM CD NumType=Card _ _ _ _ 62 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 - - SYM SYM _ _ _ _ SpaceAfter=No 64 1 1 NUM CD NumType=Card _ _ _ _ 65 receptors receptor NOUN NNS Number=Plur _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 1R 1r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 4671 # text = Type I interferons (IFN-alpha and IFN-beta) and type II interferon (IFN-gamma) inhibit induction of these genes by IL-4 and IL-13. 1 Type type NOUN NN Number=Sing _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 interferons interferon NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 type type VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 interferon interferon NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4672 # text = However, the mechanism by which IFNs mediate this inhibition has not been defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 8 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4673 # text = In this overview, we discuss the role of the transcription factor, STAT6 (signal transducer and activator of transcription-6) in mediating IL-4- and IL-13-induced gene expression in monocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 overview overview NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 transducer transducer NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4674 # text = We also discuss our recent findings that type I and type II IFNs suppress IL-4/IL-13-inducible gene expression by inhibiting tyrosine phosphorylation and nuclear translocation of STAT6. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 recent recent ADJ JJ Degree=Pos _ _ _ _ 6 findings finding NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 14 suppress suppress NOUN NN Number=Sing _ _ _ _ 15 IL-4/IL Il-4/il ADP IN _ _ _ _ SpaceAfter=No 16 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4675 # text = The ability of type I and type II IFNs to inhibit IL-4/IL-13-induced STAT6 activity is dose- and time-dependent, and is not unique to monocytes because IFNs induce the same effects in fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 unique unique ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 because because SCONJ IN _ _ _ _ _ 31 IFNs IFN PROPN NNPS Number=Plur _ _ _ _ 32 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 same same ADJ JJ Degree=Pos _ _ _ _ 35 effects effect NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4676 # text = Inhibition of STAT6 activity is not evident unless cells are preincubated with IFN for at least 1 h before IL-4 stimulation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 evident evident ADJ JJ Degree=Pos _ _ _ _ 8 unless unless SCONJ IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 before before ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4677 # text = Furthermore, inhibition can be blocked by actinomycin D, indicating a requirement for de novo transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 actinomycin actinomycin ADP IN _ _ _ _ _ 9 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 requirement requirement NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 de de PROPN NNP Number=Sing _ _ _ _ 16 novo novo PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4678 # text = We propose a model in which stimulation of monocytes by IFN activates de novo synthesis of an inhibitory factor, possibly one or more members of the SOCS/ SSI/CIS gene family, capable of suppressing activation of STAT6 by IL-4 and IL-13. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 12 activates activate NOUN NNS Number=Plur _ _ _ _ 13 de de VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 novo novo ADJ JJ Degree=Pos _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 possibly possibly ADV RB _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 more more ADJ JJR Degree=Cmp _ _ _ _ 25 members member NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 SOCS SOCS PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ _ 30 SSI SSI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 CIS CIS DET DT Number=Sing|PronType=Dem _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 capable capable ADJ JJ Degree=Pos _ _ _ _ 37 of of SCONJ IN _ _ _ _ _ 38 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 4 4 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4679 # text = Because STAT6 activation plays an essential role in IL-4/IL-13-induced gene expression, the ability of IFN-beta and IFN-gamma to inhibit STAT6 activity provides an explanation for how IFNs can suppress IL-4/IL-13-inducible gene expression. 1 Because because SCONJ IN _ _ _ _ _ 2 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 26 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 explanation explanation NOUN NN Number=Sing _ _ _ _ 31 for for SCONJ IN _ _ _ _ _ 32 how how ADV WRB PronType=Int _ _ _ _ 33 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 36 IL-4/IL Il-4/il ADP IN _ _ _ _ SpaceAfter=No 37 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4680 # text = Document 003001343 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001343 003001343 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4681 # text = Positive and negative regulation of IL-2 gene expression: role of multiple regulatory sites. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 negative negative ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4682 # text = Interleukin 2 (IL-2) is an important lymphokine required in the process of T cell activation, proliferation, clonal expansion and differentiation. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 process process NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 24 expansion expansion NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4683 # text = The IL-2 gene displays both T cell specific and inducible expression: it is only expressed in CD4+ T cells after antigenic or mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 T t NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4684 # text = Several cis-acting regulatory sites are required for induction of the IL-2 gene after stimulation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4685 # text = In this study, we have analysed the function of these cis-acting regulatory sites in the context of the native IL-2 enhancer and promoter sequence. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 context context NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 native native ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4686 # text = The results of this study suggest that the NFAT (-276 to -261), the distal octamer (-256 to -248) and the proximal octamer (-75 to -66) sites not only act as enhancers of IL-2 gene transcription in the presence of cellular stimulation, but also have a silencing effect on IL-2 gene expression in resting cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 (-276 (-276 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 261 261 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 distal distal ADJ JJ Degree=Pos _ _ _ _ 18 octamer octamer NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 256 256 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 248 248 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 29 octamer octamer NOUN NN Number=Sing _ _ _ _ 30 (- (- PUNCT . _ _ _ _ SpaceAfter=No 31 75 75 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 66 66 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 not not ADV RB _ _ _ _ _ 38 only only ADV RB _ _ _ _ _ 39 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 as as SCONJ IN _ _ _ _ _ 41 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 presence presence NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 53 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 but but CCONJ CC _ _ _ _ _ 56 also also ADV RB _ _ _ _ _ 57 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 silencing silence NOUN NN Number=Sing _ _ _ _ 60 effect effect NOUN NN Number=Sing _ _ _ _ 61 on on ADP IN _ _ _ _ _ 62 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 2 2 NUM CD NumType=Card _ _ _ _ 65 gene gene NOUN NN Number=Sing _ _ _ _ 66 expression expression NOUN NN Number=Sing _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 resting rest ADJ JJ Degree=Pos _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 4687 # text = Two other sites display disparate effects on IL-2 gene expression in different T leukemia cell lines: the distal purine box (-291 to -277) and the proximal purine box sites (-145 to -128). 1 Two two NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 disparate disparate ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 distal distal ADJ JJ Degree=Pos _ _ _ _ 22 purine purine NOUN NN Number=Sing _ _ _ _ 23 box box NOUN NN Number=Sing _ _ _ _ 24 (- (- PUNCT . _ _ _ _ SpaceAfter=No 25 291 291 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 277 277 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 33 purine purine NOUN NN Number=Sing _ _ _ _ 34 box box NOUN NN Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 145 145 NUM CD NumType=Card _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 128 128 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4688 # text = Finally, the AP-1 (-186 to -176) and the kappa B sites (-206 to -195) respond to different cellular activation in EL4 cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 -186 -186 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 176 176 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 206 206 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 195 195 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 respond respond NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 EL4 EL4 PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4689 # text = The AP-1 site mediated the response to PMA stimulation while the kappa B site responded to IL-1 stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4690 # text = These data suggest that the regulation of IL-2 gene expression is a complex process and multiple cis-acting regulatory sites interact to exert different effects in T cells representative of alternative stages of differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 complex complex ADJ JJ Degree=Pos _ _ _ _ 16 process process NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 acting acting VERB VBG VerbForm=Ger _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 exert exert VERB VB VerbForm=Inf _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 representative representative VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 35 stages stage NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4691 # text = Document 003001344 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001344 003001344 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4692 # text = Nuclear transcription factors that bind to elements of the IL-2 promoter. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4693 # text = Induction requirements in primary human T cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 requirements requirement NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4694 # text = Prior studies have identified several elements that contribute to the activity of the IL-2 promoter in the stimulated T cell line, Jurkat. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4695 # text = The sites and their corresponding nuclear binding factors include: NF-kappa B, AP-1, AP-3, OCT-1, and NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sites site NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 corresponding correspond NOUN NN Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 OCT Oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4696 # text = The latter "nuclear factor for activated T cells" likely contributes to the tissue specificity of IL-2 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 " " PUNCT `` _ _ _ _ SpaceAfter=No 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 " " PUNCT `` _ _ _ _ _ 11 likely likely ADJ JJ Degree=Pos _ _ _ _ 12 contributes contribute NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tissue tissue NOUN NN Number=Sing _ _ _ _ 16 specificity specificity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4697 # text = Using electrophoretic mobility shift assays, we have studied these transcription factors in primary T cells from human blood to verify their presence in a physiologic setting and to identify the signals that stimulate factor activity. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 verify verify VERB VB VerbForm=Inf _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 27 setting set NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 identify identify VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 signals signal NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4698 # text = All factors are induced in the nuclei of T cells upon activation with mitogens but not with exogenous IL-2 growth factor. 1 All all DET DT _ _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4699 # text = However, the signaling requirements and sensitivity to protein synthesis inhibitors differ considerably. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 protein protein VERB VB VerbForm=Inf _ _ _ _ 10 synthesis synthesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 considerably considerably ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4700 # text = Only the activities for NF-AT and AP-1 sites require two signals for optimal induction, i.e., PMA plus either lectin or antibody to the CD3 or CD28 surface molecules. 1 Only only ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activities activity NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 PMA PMA PROPN NNP Number=Sing _ _ _ _ 23 plus plus CCONJ CC _ _ _ _ _ 24 either either CCONJ CC _ _ _ _ _ 25 lectin lectin NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 antibody antibody PRON NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ _ 34 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4701 # text = Other factors are induced by lectin, antibody, and/or PMA alone. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 antibody antibody PRON NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 or or CCONJ CC _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ _ 14 alone alone ADV RB _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4702 # text = After appropriate stimulation, both NF-AT and AP-1 are peculiarly sensitive to the protein synthesis inhibitor anisomycin. 1 After after ADP IN _ _ _ _ _ 2 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 peculiarly peculiarly ADV RB _ _ _ _ _ 15 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 anisomycin anisomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4703 # text = Our data correlate the activity of NF-AT and AP-1 in gel shift assays with the two signals requirements for IL-2 gene expression. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AT AT NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ _ 22 requirements requirement NOUN NNS Number=Plur _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4704 # text = Document 003001345 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001345 003001345 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4705 # text = Expression of transcription factor genes after influenza A virus infection. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 influenza influenza NOUN NN Number=Sing _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4706 # text = Infection of human monocytes with influenza 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 influenza influenza NOUN NN Number=Sing _ _ _ _ # sent_id = 4707 # text = A virus induces a broad range of proinflammatory cytokines and mononuclear cell attracting chemokines before the infected cells undergo apoptosis. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 broad broad ADJ JJ Degree=Pos _ _ _ _ 6 range range NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 attracting attract VERB VBG VerbForm=Ger _ _ _ _ 14 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 15 before before ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 20 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4708 # text = The underlying mechanisms by which the corresponding genes are transcriptionally initiated after virus infection are still poorly understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 18 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4709 # text = Activation of NF-kappa B seems to play an important role in the regulation of many proinflammatory cytokine genes, but cannot be the only mechanism, since several cytokine genes lack respective binding sites in their promoter regions. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 many many ADJ JJ Degree=Pos _ _ _ _ 18 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 24 not not PART RB _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 only only ADJ JJ Degree=Pos _ _ _ _ 28 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 since since SCONJ IN _ _ _ _ _ 31 several several ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 lack lack NOUN NN Number=Sing _ _ _ _ 35 respective respective ADJ JJ Degree=Pos _ _ _ _ 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 sites site NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ _ 41 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4710 # text = Therefore, we additionally investigated other transcription factors of possible importance such as CREB, CTF, OTF-1, and OTF-2. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 additionally additionally ADV RB _ _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 possible possible ADJ JJ Degree=Pos _ _ _ _ 11 importance importance NOUN NN Number=Sing _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4711 # text = To explore long-term regulatory mechanisms, we investigated the induction of transcription factors on the gene expression level which may be important to substitute for metabolized transcription factor proteins after their activation. 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 term term NOUN NN Number=Sing _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 substitute substitute VERB VB VerbForm=Inf _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 metabolized metabolize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 after after ADP IN _ _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4712 # text = We identified a cell-type-specific differential response: CREB, CTF, OTF-1, OFT-2, and NF-kappa B genes were strongly induced 1 to 4 hours after influenza 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 differential differential NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 OFT OFT NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 strongly strongly ADV RB _ _ _ _ _ 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 4 4 NUM CD NumType=Card _ _ _ _ 36 hours hour NOUN NNS Number=Plur _ _ _ _ 37 after after ADP IN _ _ _ _ _ 38 influenza influenza NOUN NN Number=Sing _ _ _ _ # sent_id = 4713 # text = A virus infection in the monocytic cell line Mono Mac 6, while in freshly prepared human monocytes no significant changes were detected. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 Mono Mono PROPN NNP Number=Sing _ _ _ _ 10 Mac Mac PROPN NNP Number=Sing _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 freshly freshly ADV RB _ _ _ _ _ 16 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 no no DET DT _ _ _ _ _ 20 significant significant ADJ JJ Degree=Pos _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4714 # text = In infected monocytes, which die by apoptosis, the expression of CREB, CTF, and OTF-2 was rather suppressed 8 hours after infection. 1 In in ADP IN _ _ _ _ _ 2 infected infect ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 die die VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 apoptosis apoptosis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 rather rather ADV RB _ _ _ _ _ 23 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 8 8 NUM CD NumType=Card _ _ _ _ 25 hours hour NOUN NNS Number=Plur _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4715 # text = In conclusion, the long-term regulation of transcription factor gene expression in non-proliferating cells seems to be of minor importance after influenza infection since in apoptosisprone cells an immediate availability of transcription factor proteins is required. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 term term NOUN NN Number=Sing _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 non-proliferating non-proliferat ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 minor minor ADJ JJ Degree=Pos _ _ _ _ 22 importance importance NOUN NN Number=Sing _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 influenza influenza ADJ JJ Degree=Pos _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 since since SCONJ IN _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 apoptosisprone apoptosisprone ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 32 availability availability NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4716 # text = Document 003001346 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001346 003001346 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4717 # text = Cell-specific expression of helix-loop-helix transcription factors encoded by the E2A gene. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 helix helix NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 E2A E2a PROPN NNP Number=Sing _ _ _ _ 16 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4718 # text = The E2A gene encodes transcription factors of the helix-loop-helix family that are implicated in cell-specific gene expression as part of dimeric complexes that interact with E box enhancer elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 E2A E2A PROPN NNP Number=Sing _ _ _ _ 3 gene gene PROPN NNP Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 helix helix NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 part part NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 dimeric dimeric ADJ JJ Degree=Pos _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 E e NOUN NN Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4719 # text = It has previously been shown that transcripts of the E2A gene can be detected in a wide range of cell types. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E2A E2a PROPN NNP Number=Sing _ _ _ _ 11 gene gene PROPN NNP Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 wide wide ADJ JJ Degree=Pos _ _ _ _ 18 range range NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4720 # text = We have now examined expression of the mouse E2A gene at the protein level using polyclonal antisera directed against distinct portions of the E2A protein to probe blots of cellular extracts. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 18 antisera antisera NOUN NN Number=Sing _ _ _ _ 19 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 against against ADP IN _ _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 portions portion NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 E2A E2A PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 probe probe VERB VB VerbForm=Inf _ _ _ _ 29 blots blot NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 32 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4721 # text = A 73 kDa protein was identified by this analysis: this protein is highly enriched in cell lines of B lymphoid origin as compared to pancreatic beta-cells and fibroblast cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 73 73 NUM CD NumType=Card _ _ _ _ 3 kDa kDa NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 highly highly ADV RB _ _ _ _ _ 15 enriched enrich VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 22 origin origin NOUN NN Number=Sing _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4722 # text = The detection of this protein selectively in extracts of lymphoid cells correlates with the presence of the E box-binding activity LEF1/BCF1 in these cells; this binding activity was previously shown to be efficiently recognized by antiserum directed against E2A gene products. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 detection detection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 selectively selectively ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 E e NOUN NN Number=Sing _ _ _ _ 19 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 LEF1/BCF1 Lef1/bcf1 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 previously previously ADV RB _ _ _ _ _ 33 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 efficiently efficiently ADV RB _ _ _ _ _ 37 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 40 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 against against ADP IN _ _ _ _ _ 42 E2A E2a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 gene gene ADJ JJ Degree=Pos _ _ _ _ 44 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4723 # text = Transfection of cells with full length E2A cDNA leads to appearance of protein co-migrating with the 73 kDa protein on SDS gel electrophoresis and co-migrating with LEF1/BCF1 on mobility shift analysis. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 full full ADJ JJ Degree=Pos _ _ _ _ 6 length length NOUN NN Number=Sing _ _ _ _ 7 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 appearance appearance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 co-migrating co-migrat NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 73 73 NUM CD NumType=Card _ _ _ _ 19 kDa kDa NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 SDS SDS NOUN NN Number=Sing _ _ _ _ 23 gel gel NOUN NN Number=Sing _ _ _ _ 24 electrophoresis electrophoresis NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 co-migrating co-migrat VERB VBG VerbForm=Ger _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 LEF1/BCF1 LEF1/BCF1 PROPN NNP Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 shift shift NOUN NN Number=Sing _ _ _ _ 32 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4724 # text = Our results are consistent with the view that the DNA-binding activity LEF1/BCF1 is a homodimer of E2A proteins; the selective appearance of this putative cell-specific transcription factor in B lymphoid cells seems to be attributable, at least in part, to the elevated E2A protein concentrations in these cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 view view NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 LEF1/ Lef1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 BCF1 Bcf1 NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 E2A E2a PROPN NNP Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 selective selective ADJ JJ Degree=Pos _ _ _ _ 25 appearance appearance NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 putative putative ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 attributable attributable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 at at ADV RB _ _ _ _ _ 44 least least ADV RBS Degree=Sup _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 E2A E2a NOUN NN Number=Sing _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ _ 53 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4725 # text = Document 003001347 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001347 003001347 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4726 # text = Inducible nitric oxide: an autoregulatory feedback inhibitor of vascular inflammation. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 3 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 7 feedback feedback NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4727 # text = Inducible nitric oxide (iNO) is produced at sites of vascular inflammation by resident and nonresident vascular wall cells, but its role in the inflammatory process is not known. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 3 oxide oxide NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 iNO iNO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 13 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 resident resident NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nonresident nonresident ADJ JJ Degree=Pos _ _ _ _ 18 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 19 wall wall NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 24 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 process process NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4728 # text = In this study, we show that a novel function of iNO is to terminate inflammatory processes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 iNO iNO NOUN NN Number=Sing _ _ _ _ 13 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 terminate terminate VERB VB VerbForm=Inf _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4729 # text = We find that iNO produced by murine macrophage-like cells, RAW264.7, can inhibit cytokine-induced endothelial cell activation in a separated and mixed endothelial-RAW264.7 coculture system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 iNO ino PROPN NNP Number=Sing _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 murine murine NOUN NN Number=Sing _ _ _ _ 8 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 264.7 264.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 RAW264.7 RAW264.7 NOUN NN Number=Sing _ _ _ _ 32 coculture coculture NOUN NN Number=Sing _ _ _ _ 33 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4730 # text = Both iNO production and endothelial VCAM-1 expression were induced simultaneously with bacterial LPS and murine-specific IFN-gamma. 1 Both both DET DT _ _ _ _ _ 2 iNO ino ADJ JJ Degree=Pos _ _ _ _ 3 production production NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 simultaneously simultaneously ADV RB _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 LPS Lps NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 murine murine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4731 # text = Inhibition of iNO synthase (iNOS) activity with N omega-monomethyl-L-arginine in endothelial-RAW264.7 cocultures, stimulated with murine-specific IFN-gamma and LPS, decreased iNO production by 86%, augmented VCAM-1 and iNOS expression in endothelial and RAW264.7 cells, respectively, and increased monocyte adhesion to the endothelial cell surface. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 iNO ino DET DT _ _ _ _ _ 4 synthase synthase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 iNOS iNOS NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 N N PROPN NNP Number=Sing _ _ _ _ 11 omega omega X AFX _ _ _ _ SpaceAfter=No 12 -monomethyl -monomethyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 L l ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 arginine arginine NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 -RAW264.7 -RAW264.7 NUM CD NumType=Card _ _ _ _ 20 cocultures coculture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 murine murine NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 iNO ino DET DT _ _ _ _ _ 35 production production NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 iNOS inos ADJ JJ Degree=Pos _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 RAW raw PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 264.7 264.7 NUM CD NumType=Card _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 59 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 60 to to ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 63 cell cell NOUN NN Number=Sing _ _ _ _ 64 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 4732 # text = Transient transfection studies using various VCAM-1 promoter constructs demonstrated that inhibitory effects of iNO on VCAM-1 gene transcription were mediated, in part, by inhibitory effects of iNO on kappa B cis-acting elements. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 various various ADJ JJ Degree=Pos _ _ _ _ 6 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 effects effect NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 iNO iNO PROPN NNP Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 iNO iNO NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 acting acte VERB VBG VerbForm=Ger _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4733 # text = Immunofluorescence studies using an Ab to the RelA (p65) subunit of nuclear factor-kappa B revealed that iNO inhibited the activation of nuclear factor-kappa B. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Ab Ab PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 RelA Rela NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 iNO iNO PROPN NNP Number=Sing _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4734 # text = These studies indicate that iNO attenuates iNOS expression in macrophages and inhibits monocyte adhesion to endothelial cells, and suggest that endogenously derived iNO may be an important autoregulatory inhibitor of vascular inflammation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 iNO iNO X GW _ _ _ _ _ 6 attenuates attenuate X GW _ _ _ _ _ 7 iNOS inos X GW _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 endogenously endogenously ADV RB _ _ _ _ _ 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 iNO ino PROPN NNP Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 30 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 33 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4735 # text = Document 003001348 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001348 003001348 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4736 # text = Evidence that calcineurin is rate-limiting for primary human lymphocyte activation. 1 Evidence evidence SCONJ IN _ _ _ _ _ 2 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 3 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 limiting limiting NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4737 # text = Cyclosporine (CsA) is both a clinical immunosuppressive drug and a probe to dissect intracellular signaling pathways. 1 Cyclosporine Cyclosporine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 both both DET PDT _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 drug drug NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 probe probe NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 dissect dissect VERB VB VerbForm=Inf _ _ _ _ 16 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 17 signaling signal NOUN NN Number=Sing _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4738 # text = In vitro, CsA inhibits lymphocyte gene activation by inhibiting the phosphatase activity of calcineurin (CN). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CsA csa PROPN NNP Number=Sing _ _ _ _ 5 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 6 lymphocyte lymphocyte VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gene gene ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CN CN NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4739 # text = In clinical use, CsA treatment inhibits 50-75% of CN activity in circulating leukocytes. 1 In in ADP IN _ _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 use use NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CsA csa PROPN NNP Number=Sing _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CN Cn ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 17 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4740 # text = We modeled this degree of CN inhibition in primary human leukocytes in vitro in order to study the effect of partial CN inhibition on the downstream signaling events that lead to gene activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 modeled model VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 degree degree NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 order order NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 study study VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 CN Cn NOUN NN Number=Sing _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 27 signaling signal NOUN NN Number=Sing _ _ _ _ 28 events event NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 gene gene VERB VB VerbForm=Inf _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4741 # text = In CsA-treated leukocytes stimulated by calcium ionophore, the degree of reduction in CN activity was accompanied by a similar degree of inhibition of each event tested: dephosphorylation of nuclear factor of activated T cell proteins, nuclear DNA binding, activation of a transfected reporter gene construct, IFN-gamma and IL-2 mRNA accumulation, and IFN-gamma production. 1 In in ADP IN _ _ _ _ _ 2 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ _ 9 ionophore ionophore ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 degree degree NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 reduction reduction NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 CN CN ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 similar similar ADJ JJ Degree=Pos _ _ _ _ 23 degree degree NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 event event NOUN NN Number=Sing _ _ _ _ 29 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ 31 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 42 DNA dna NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 reporter reporter NOUN NN Number=Sing _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ _ 51 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 gamma gamma NOUN NN Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 2 2 NUM CD NumType=Card _ _ _ _ 60 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 61 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 gamma gamma NOUN NN Number=Sing _ _ _ _ 67 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 4742 # text = Furthermore, the degree of CN inhibition was reflected by a similar degree of reduction in lymphocyte proliferation and IFN-gamma production in the allogeneic mixed lymphocyte cultures. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 degree degree NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 degree degree NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 reduction reduction NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 allogeneic allogeneic ADJ JJ Degree=Pos _ _ _ _ 27 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 29 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4743 # text = These data support the conclusion that CN activity is rate-limiting for the activation of primary human T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CN Cn ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 limiting limiting NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 primary primary ADJ JJ Degree=Pos _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t NOUN NN Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4744 # text = Thus, the reduction of CN activity observed in CsA-treated patients is accompanied by a similar degree of reduction in lymphocyte gene activation, and accounts for the immunosuppression observed. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 reduction reduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN CN PROPN NNP Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 degree degree NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 reduction reduction NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 accounts account NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4745 # text = Document 003001349 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001349 003001349 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4746 # text = Identification of upstream regulatory elements that repress expression of adult beta-like globin genes in a primitive erythroid environment. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 repress repress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 adult adult NOUN NN Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4747 # text = Our investigations have focused on localizing cis-elements responsible for the down regulation of the adult beta-like globin genes (delta and beta) in immature, or primitive erythroid tissues. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 investigations investigation NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on SCONJ IN _ _ _ _ _ 6 localizing localizing VERB VBG VerbForm=Ger _ _ _ _ 7 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 down down ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 adult adult NOUN NN Number=Sing _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 delta delta NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 immature immature ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4748 # text = We studied their activity after transfection into K562 cells, an erythroleukemia cell line with an embryonic-fetal phenotype. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 K562 K562 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 erythroleukemia erythroleukemia ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 embryonic embryonic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4749 # text = Analyzed DNA sequences included delta and beta 5' flanking regions extending from approximately -500 to +50bp (promoter regions), truncated delta and beta 5' flanking regions extending from approximately -250 to +50 bp, and chimeric promoter constructions, which consisted of a distal delta or beta fragment fused to a proximal beta or delta sequence. 1 Analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 sequences sequence NOUN NNS Number=Plur _ _ _ _ 4 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 delta delta NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 11 regions region NOUN NNS Number=Plur _ _ _ _ 12 extending extend VERB VBG VerbForm=Ger _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 500 500 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 + + SYM SYM _ _ _ _ SpaceAfter=No 19 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 truncated truncated ADJ JJ Degree=Pos _ _ _ _ 27 delta delta NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ _ 30 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ' ' PUNCT `` _ _ _ _ _ 32 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 33 regions region NOUN NNS Number=Plur _ _ _ _ 34 extending extend VERB VBG VerbForm=Ger _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 approximately approximately ADV RB _ _ _ _ _ 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 250 250 NUM CD NumType=Card _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 +50 +50 NUM CD NumType=Card _ _ _ _ 41 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 45 promoter promoter NOUN NN Number=Sing _ _ _ _ 46 constructions construction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 which which PRON WDT PronType=Rel _ _ _ _ 49 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 distal distal ADJ JJ Degree=Pos _ _ _ _ 53 delta delta NOUN NN Number=Sing _ _ _ _ 54 or or CCONJ CC _ _ _ _ _ 55 beta beta NOUN NN Number=Sing _ _ _ _ 56 fragment fragment NOUN NN Number=Sing _ _ _ _ 57 fused fuse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 58 to to ADP IN _ _ _ _ _ 59 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 61 beta beta NOUN NN Number=Sing _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 delta delof NOUN NN Number=Sing _ _ _ _ 64 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 4750 # text = In CAT reporter constructions no appreciable level of CAT activity was supported by the beta globin promoter, and only low level activity by the delta promoter. 1 In in ADP IN _ _ _ _ _ 2 CAT cat ADJ JJ Degree=Pos _ _ _ _ 3 reporter reporter NOUN NN Number=Sing _ _ _ _ 4 constructions construction NOUN NNS Number=Plur _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 appreciable appreciable ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 supported support VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 globin globin ADP IN _ _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 delta delta NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4751 # text = Truncation of the beta globin promoter led to a 2-3 fold increase in promoter activity. 1 Truncation Truncation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 globin globin NOUN NN Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ _ 13 fold fold NOUN NN Number=Sing _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4752 # text = In contrast, deletion of the upstream portion of the delta promoter led to a 10 fold decrease in expression. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 8 portion portion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 delta delta PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 decrease decrease NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4753 # text = Coupling of the upstream beta globin sequence from approximately -500 to -250 bp to the truncated delta promoter fragment led to complete extinction of transcription activity, consistent with a negative regulatory effect of the beta globin gene upstream element(s). 1 Coupling Coupling NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 approximately approximately ADV RB _ _ _ _ _ 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 500 500 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 250 250 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 delta delta NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 fragment fragment NOUN NN Number=Sing _ _ _ _ 22 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 complete complete ADJ JJ Degree=Pos _ _ _ _ 25 extinction extinction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 negative negative ADJ JJ Degree=Pos _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 globin globin NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 upstream upstream NOUN NN Number=Sing _ _ _ _ 42 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 s s X AFX _ _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4754 # text = Fusion of the upstream portion of the delta promoter to the truncated beta globin promoter yielded a modest increase in promoter strength relative to the truncated beta gene promoter, indicating the presence of a positive transcriptional element(s) in the upstream delta globin regulatory region. 1 Fusion fusion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 5 portion portion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 modest modest ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 strength strength NOUN NN Number=Sing _ _ _ _ 23 relative relative ADV RB _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 presence presence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 positive positive ADJ JJ Degree=Pos _ _ _ _ 37 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 s s X AFX _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 45 delta delta NOUN NN Number=Sing _ _ _ _ 46 globin globin ADP IN _ _ _ _ _ 47 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 48 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4755 # text = Site-directed mutagenesis of binding sites for the repressor proteins BP1 and BP2 in the upstream portion of the beta globin gene flanking region led to a 4-6 fold increase in promoter activity. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of SCONJ IN _ _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 repressor repressor NOUN NN Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 BP1 BP1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 BP2 BP2 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 18 portion portion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ _ 32 fold fold NOUN NN Number=Sing _ _ _ _ 33 increase increase NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4756 # text = DNase I footprinting of the upstream delta-globin region revealed protected sequences corresponding to consensus binding sites for GATA-1 and BP2. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 7 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ _ 14 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 consensus consensus VERB VB VerbForm=Inf _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 BP2 BP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4757 # text = These results confirm that sequences in the upstream promoter region of the adult beta globin gene contribute to its factor-mediated suppression early in development and then may modulate its expression at a later stage. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 confirm confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 adult adult NOUN NN Number=Sing _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 globin globin ADP IN _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 contribute contribute NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 suppression suppression NOUN NN Number=Sing _ _ _ _ 24 early early ADV RB Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 then then ADV RB PronType=Dem _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 later later ADJ JJR Degree=Cmp _ _ _ _ 36 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4758 # text = Document 003001350 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001350 003001350 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4759 # text = Characterization of the human immunodeficiency virus type 1 enhancer-binding proteins from the human T-cell line Jurkat. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4760 # text = The transcription of the human immunodeficiency virus type 1 (HIV-1) is under the control of cellular proteins that bind to the viral long terminal repeat (LTR). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4761 # text = Among the protein-binding regions of the HIV-1 LTR is the transcription-enhancer region. 1 Among among ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4762 # text = We show that at least one inducible, C1, and one constitutive, C2, protein can bind to the HIV enhancer in Jurkat cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 at at ADV RB _ _ _ _ _ 5 least least ADV RBS Degree=Sup _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 C1 C1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 constitutive constitutive NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 C2 c2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 bind bind VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4763 # text = The two proteins differ in their surface charge, since they are separable by anion-exchange chromatography. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 surface surface NOUN NN Number=Sing _ _ _ _ 8 charge charge NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 since since SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 separable separable ADJ JJ Degree=Pos _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 anion anion NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 exchange exchange NOUN NN Number=Sing _ _ _ _ 18 chromatography chromatography NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4764 # text = Bivalent cations such as Mg2+ and Zn2+ differentially affect their binding to oligonucleotides which contain the HIV-enhancer domain. 1 Bivalent Bivalent ADJ JJ Degree=Pos _ _ _ _ 2 cations cation NOUN NNS Number=Plur _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 Mg2 Mg2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Zn2 Zn2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 differentially differentially ADV RB _ _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4765 # text = Both C1 and C2 proteins also bind to a similar sequence found in the interleukin-2-receptor alpha-subunit enhancer. 1 Both both CCONJ CC _ _ _ _ _ 2 C1 c1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 C2 C2 NUM CD NumType=Card _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 subunit subunit NOUN NN Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4766 # text = The inducible C1 protein was partially purified by three chromatographic steps and characterized by u.v. cross-linking as a 47 kDa protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 3 C1 C1 NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 partially partially ADV RB _ _ _ _ _ 7 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 chromatographic chromatographic ADJ JJ Degree=Pos _ _ _ _ 11 steps step NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 u.v. u.v. NOUN NN Number=Sing _ _ _ _ 16 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 47 47 NUM CD NumType=Card _ _ _ _ 21 kDa kDa NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4767 # text = Document 003001351 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001351 003001351 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4768 # text = Mechanisms of transactivation by nuclear factor of activated T cells-1. 1 Mechanisms Mechanism NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4769 # text = Nuclear factor of activated T cells-family proteins (NFAT1/NFATp, NFATc, NFAT3, and NFAT4/NFATx/NFATc3) play a key role in the transcription of cytokine genes and other genes during the immune response. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 family family NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NFAT3 NFAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NFAT4/NFATx NFAT4/NFATx PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 NFATc3 NFATc3 X LS _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 play play VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 key key ADJ JJ Degree=Pos _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 other other ADJ JJ Degree=Pos _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ _ 37 during during ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4770 # text = We have defined the mechanisms of transactivation by NFAT1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4771 # text = NFAT1 possesses two transactivation domains whose sequences are not conserved in the other NFAT-family proteins, and a conserved DNA-binding domain that mediates the recruitment of cooperating nuclear transcription factors even when it is expressed in the absence of other regions of the protein. 1 NFAT1 NFAT1 NUM CD NumType=Card _ _ _ _ 2 possesses possess NOUN NNS Number=Plur _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 domains domain NOUN NNS Number=Plur _ _ _ _ 6 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 family family NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 cooperating cooperate VERB VBG VerbForm=Ger _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 even even ADV RB _ _ _ _ _ 36 when when ADV WRB PronType=Int _ _ _ _ 37 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 absence absence NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 other other ADJ JJ Degree=Pos _ _ _ _ 45 regions region NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4772 # text = The activity of the NH2-terminal transactivation domain is modulated by an adjacent regulatory region that contains several conserved sequence motifs represented only in the NFAT family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 8 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 motifs motif NOUN NNS Number=Plur _ _ _ _ 23 represented represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4773 # text = Our results emphasize the multiple levels at which NFAT-dependent transactivation is regulated, and predict significant differences in the architecture of cooperative transcription complexes containing different NFAT-family proteins. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 NFAT NFAT ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 predict predict VERB VB VerbForm=Inf _ _ _ _ 18 significant significant ADJ JJ Degree=Pos _ _ _ _ 19 differences difference NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 architecture architecture NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 containing contain VERB VBG VerbForm=Ger _ _ _ _ 28 different different ADJ JJ Degree=Pos _ _ _ _ 29 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 family family NOUN NN Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4774 # text = Document 003001352 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001352 003001352 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4775 # text = Activation protein 1-dependent transcriptional activation of interleukin 2 gene by Ca2+/calmodulin kinase type IV/Gr. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 +/ +/ PUNCT HYPH _ _ _ _ SpaceAfter=No 15 calmodulin calmodulin NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 Gr Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4776 # text = The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr is selectively expressed in T lymphocytes and is activated after signaling via the T cell antigen receptor (TCR), indicating that it mediates some of the Ca(2+)-dependent transcriptional events that follow TCR engagement. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CaMK CaMK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 IV iv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Gr Gr PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 selectively selectively ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 after after SCONJ IN _ _ _ _ _ 24 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 T T PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 antigen antigen NUM CD NumType=Card _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 38 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 some some DET DT _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 +) +) SYM NFP _ _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 events event NOUN NNS Number=Plur _ _ _ _ 50 that that PRON WDT PronType=Rel _ _ _ _ 51 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 52 TCR Tcr ADJ JJ Degree=Pos _ _ _ _ 53 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4777 # text = Here we show that CaMKIV/Gr induces the transcription factor activation protein 1 (AP-1) alone or in synergy with T cell mitogens and with the p21ras oncoprotein. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 Gr Gr PROPN NNP Number=Sing _ _ _ _ 8 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 alone alone ADJ JJ Degree=Pos _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 synergy synergy NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 32 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4778 # text = CaMKIV/ 1 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ _ # sent_id = 4779 # text = Gr signaling is associated with transcriptional activation of c-fos but is independent of p21ras or calcineurin. 1 Gr Gr NOUN NN Number=Sing _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p21ras p21ras NOUN NNS Number=Plur _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4780 # text = AP-1 is an integral component of the nuclear factor of activated T cells (NFAT) transcriptional complex, which is required for interleukin 2 gene expression in T cells. 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 integral integral ADJ JJ Degree=Pos _ _ _ _ 7 component component NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 interleukin interleukin ADV RB _ _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4781 # text = We demonstrate that CaMKIV/Gr reconstitutes the capacity of the cytosolic component of NFAT to direct transcription from NFAT sites in non-T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 Gr Gr PROPN NNP Number=Sing _ _ _ _ 7 reconstitutes reconstitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 13 component component NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 direct direct VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 no no DET DT _ _ _ _ SpaceAfter=No 24 n-T n-t ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4782 # text = These results reveal a central role for CaMKIV/Gr as a Ca(2+)-regulated activator of gene transcription in T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 Gr Gr PROPN NNP Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 +) +) SYM NFP _ _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4783 # text = Document 003001353 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001353 003001353 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4784 # text = Transactivation of the interleukin-1alpha promoter by human T-cell leukemia virus type I and type II Tax proteins. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4785 # text = Human T-cell leukemia virus type I (HTLV-I)-infected T-cell lines constitutively produce high levels of interleukin-1alpha (IL-1alpha). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 produce produce VERB VB VerbForm=Inf _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4786 # text = To analyze the mechanisms that lead to the expression of IL-1alpha in HTLV-I-infected cell lines, we studied regulatory regions of the human IL-1alpha promoter involved in activation of the IL-1alpha gene. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 regions region NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 alpha alpha NOUN NN Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4787 # text = IL-1alpha promoter constructs drive transcription of the chloramphenicol acetyltransferase (CAT) reporter gene in HTLV-I-positive MT-2 cells, which constitutively produce IL-1alpha. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 drive drive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 MT mt NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 constitutively constitutively ADV RB _ _ _ _ _ 30 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 IL il ADV RB _ _ _ _ SpaceAfter=No 32 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4788 # text = In a cotransfection assay, the Tax protein of both HTLV-I and HTLV-II specifically activated transcription from the IL-1alpha promoter in an uninfected Jurkat cell line. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 II II PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 specifically specifically ADV RB _ _ _ _ _ 19 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4789 # text = A mutant Tax protein deficient in transactivation of genes by the nuclear factor (NF)-kappaB pathway was unable to induce transcriptional activity of IL-1alpha promoter-CAT constructs, but was rescued by exogenous provision of p65/p50 NF-kappaB. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 3 Tax tax NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 deficient deficient NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 unable unable ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -1alpha -1alpha NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 CAT Cat NOUN NN Number=Sing _ _ _ _ 32 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 rescued rescue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 39 provision provision NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 p65/p50 p65/p50 NUM CD NumType=Card _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4790 # text = We found that two IL-1alpha kappaB-like sites (positions -1,065 to -1,056 and +646 to +655) specifically formed a complex with NF-kappaB-containing nuclear extract from MT-2 cells and that NF-kappaB bound with higher affinity to the 3' NF-kappaB binding site than to the 5' NF-kappaB site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 like like SCONJ IN _ _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 positions position NOUN NNS Number=Plur _ _ _ _ 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1,065 1,065 NUM CD NumType=Card _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 -1,056 -1,056 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 +646 +646 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 +655 +655 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 containing contain VERB VBG VerbForm=Ger _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 extract extract NOUN NN Number=Sing _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 45 bound bound ADJ JJ Degree=Pos _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 higher higher ADJ JJR Degree=Cmp _ _ _ _ 48 affinity affinity NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 ' ' PUNCT `` _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 56 binding binding VERB VBG VerbForm=Ger _ _ _ _ 57 site site NOUN NN Number=Sing _ _ _ _ 58 than than ADP IN _ _ _ _ _ 59 to to ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ' 's NOUN NN Number=Sing _ _ _ _ 63 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 66 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 4791 # text = Moreover, deletion of either 5' or 3' NF-kappaB sites reduced IL-1alpha promoter activity in MT-2 cells and transactivation of the IL-1alpha promoter by exogenous NF-kappaB and Tax in Jurkat cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 either either CCONJ CC _ _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL IL ADV RB _ _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 Tax tax PROPN NNP Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4792 # text = These data suggest a general role for Tax induction of IL-1alpha gene transcription by the NF-kappaB pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 general general ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4793 # text = Expression of IL-1alpha by HTLV-I productively infected cells may be important in the hypercalcemia, osteolytic bone lesions, neutrophilia, elevation of C-reactive protein, and fever frequently seen in patients with HTLV-I-induced adult T-cell leukemia/lymphoma. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 productively productively ADV RB _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 hypercalcemia hypercalcemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 osteolytic osteolytic ADJ JJ Degree=Pos _ _ _ _ 21 bone bone NOUN NN Number=Sing _ _ _ _ 22 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 neutrophilia neutrophilia NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 elevation elevation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 C- C- SYM NFP _ _ _ _ SpaceAfter=No 29 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 fever fever ADV RB _ _ _ _ _ 34 frequently frequently ADV RB _ _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 patients patient NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 adult adult NOUN NN Number=Sing _ _ _ _ 45 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 leukemia leukemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4794 # text = Document 003001354 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001354 003001354 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4795 # text = USF-related transcription factor, HIV-TF1, stimulates transcription of human immunodeficiency virus-1. 1 USF USF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 TF1 tF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4796 # text = The transcription factor HIV-TF1, which binds to a region about 60 bp upstream from the enhancer of the human immunodeficiency virus-1 (HIV-1), was purified from human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 5 TF1 tF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 about about ADP IN _ _ _ _ _ 13 60 60 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4797 # text = HIV-TF1 had a molecular weight of 39,000. 1 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 TF1 tF1 PROPN NNP Number=Sing _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 weight weight NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 39,000 39,000 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4798 # text = Binding of HIV-TF1 to the HIV long terminal repeat (LTR) activated transcription from the HIV promoter in vitro. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4799 # text = The HIV-TF1-binding site in HIV LTR was similar to the site recognized by upstream stimulatory factor (USF) in the adenovirus major late promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 TF1 tF1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ _ 10 LTR LTR PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 19 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 27 major major ADJ JJ Degree=Pos _ _ _ _ 28 late late ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4800 # text = DNA-binding properties of HIV-TF1 suggested that HIV-TF1 might be identical or related to USF. 1 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 properties property NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 9 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 14 might might AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 identical identical ADJ JJ Degree=Pos _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4801 # text = Interestingly, treatment of purified HIV-TF1 by phosphatase greatly reduced its DNA-binding activity, suggesting that phosphorylation of HIV-TF1 was essential for DNA binding. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 TF1 tF1 NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 11 greatly greatly ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 DNA DNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 for for SCONJ IN _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4802 # text = The disruption of HIV-TF1-binding site induced a 60% decrease in the level of transcription from the HIV promoter in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 TF1 tF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 % % SYM NN Number=Sing _ _ _ _ 14 decrease decrease NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4803 # text = These results suggest that HIV-TF1 is involved in transcriptional regulation of HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 TF1 tF1 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4804 # text = Document 003001355 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001355 003001355 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4805 # text = An essential role for NF-kappaB in human CD34(+) bone marrow cell survival. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 essential essential ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 bone bone ADJ JJ Degree=Pos _ _ _ _ 15 marrow marrow NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4806 # text = The transcription factor, NF-kappaB, is important for T-cell activation, B-cell maturation, and human immunodeficiency virus transcription and plays a role in alternatively mediating and protecting against apoptosis in a variety of cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in SCONJ IN _ _ _ _ _ 31 alternatively alternatively ADV RB _ _ _ _ _ 32 mediating mediating VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 protecting protect VERB VBG VerbForm=Ger _ _ _ _ 35 against against ADP IN _ _ _ _ _ 36 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 variety variety NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4807 # text = However, a role for NF-kappaB in human CD34(+) bone marrow cells has not been described. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 +) +) SYM NFP _ _ _ _ _ 14 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4808 # text = We provide evidence here that virtually all human CD34(+) bone marrow cells express NF-kappaB that can be activated by exposure to phorbol 12-myristate 13-acetate and a variety of cytokines, eg, tumor necrosis factor alpha, interleukin-3, and granulocyte-macrophage colony-stimulating factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 virtually virtually ADV RB _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 CD34 Cd34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 +) +) PUNCT -RRB- _ _ _ _ _ 12 bone bone NOUN NN Number=Sing _ _ _ _ 13 marrow marrow NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 express express ADJ JJ Degree=Pos _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 exposure exposure NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 27 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 myristate myristate NOUN NN Number=Sing _ _ _ _ 30 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 acetate acetate NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 variety variety NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 eg eg X FW _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 tumor tumor NOUN NN Number=Sing _ _ _ _ 42 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 54 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 57 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4809 # text = In addition, we demonstrate that NF-kappaB may be required for human CD34(+) bone marrow cell clonogenic function and survival. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 +) +) SYM NFP _ _ _ _ _ 18 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 clonogenic clonogenic NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4810 # text = These results offer insight into a new role for NF-kappaB in maintaining survival and function in hematopoietic stem and progenitor cells and suggest that proposed strategies involving inhibition of NF-kappaB activation as an adjunct to cancer chemotherapy should be approached with caution. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 insight insight ADV RB _ _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 15 survival survival NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 stem stem NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 strategies strategy NOUN NNS Number=Plur _ _ _ _ 29 involving involve VERB VBG VerbForm=Ger _ _ _ _ 30 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 adjunct adjunct NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 cancer cancer NOUN NN Number=Sing _ _ _ _ 41 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 42 should should AUX MD VerbForm=Fin _ _ _ _ 43 be be AUX VB VerbForm=Inf _ _ _ _ 44 approached approach VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 caution caution NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4811 # text = Document 003001356 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001356 003001356 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4812 # text = Interleukin-2 promoter activity in Epstein-Barr virus-transformed 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -transformed -transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 4813 # text = B lymphocytes is controlled by nuclear factor-chi B. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 chi chi NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4814 # text = The regulation of interleukin (IL)-2 gene expression has been investigated mainly in T lymphocytes, the predominant producers of IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 mainly mainly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 22 producers producer NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4815 # text = However, B cells can also synthesize IL-2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 synthesize synthesize VERB VB VerbForm=Inf _ _ _ _ 8 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4816 # text = In the present study we analyzed the control of IL-2 promoter activity in Epstein-Barr virus (EBV)-transformed B cell clones which are capable of secreting IL-2 at a low level after stimulation with phorbol 12-myristate 13-acetate and the Ca2+ ionophore ionomycin. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Barr Barr PROPN NNP Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT : _ _ _ _ SpaceAfter=No 24 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 clones clone NOUN NNS Number=Plur _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 capable capable ADJ JJ Degree=Pos _ _ _ _ 31 of of SCONJ IN _ _ _ _ _ 32 secreting secret VERB VBG VerbForm=Ger _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 low low ADJ JJ Degree=Pos _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ _ 40 after after ADP IN _ _ _ _ _ 41 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 44 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 myristate myristate NOUN NN Number=Sing _ _ _ _ 47 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 acetate acetate NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 + + SYM SYM _ _ _ _ _ 54 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 55 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 4817 # text = Transient transfections using reporter constructs with multiples of transcription factor binding sites from the IL-2 promoter [distal nuclear factor (NF)-AT, proximal NF-AT, AP-1/Octamer (UPS) or NF-chi B (TCEd) sites] were performed. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfections transfection NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 multiples multiple NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 distal distal ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT at ADV RB _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 30 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 UPS ups PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 chi chi PROPN NNP Number=Sing _ _ _ _ 46 B b PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ] ] PUNCT -RRB- _ _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4818 # text = In EBV-transformed B clones, the chi B site exerted the strongest inducible activity; the NF-AT binding sites showed either no or only weak activity compared to Jurkat T cells. 1 In in ADP IN _ _ _ _ _ 2 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 chi chi PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 exerted exert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 AT at SCONJ IN _ _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 weak weak ADJ JJ Degree=Pos _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4819 # text = An IL-2 promoter bearing a defective NF-chi B site was completely inactive in EBV-transformed B cells, while it still had activity in Jurkat T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 chi chi PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 completely completely ADV RB _ _ _ _ _ 16 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 still still ADV RB _ _ _ _ _ 27 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4820 # text = In seven EBV-B cell clones or lines differing in their capacity to secrete IL-2, the activity of the IL-2 promoter correlated well with the status of IL-2 secretion. 1 In in ADP IN _ _ _ _ _ 2 seven seven NUM CD NumType=Card _ _ _ _ 3 EBV Ebv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 B b NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 clones clone NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 differing differ VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 secrete secrete VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 status status NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4821 # text = Similarly, a human immunodeficiency virus promoter, whose activity is controlled through chi B factors, was found to be active in the IL-2 producing EBV-B cells, but inactive in the non-IL-2-producing cells. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 chi chi NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 producing produce VERB VBG VerbForm=Ger _ _ _ _ 29 EBV Ebv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 non-IL non-il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 producing produce VERB VBG VerbForm=Ger _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4822 # text = Electrophoretic mobility shift assays using protein extracts from EBV-B cells and the IL-2 NF-chi B probe revealed the constitutive generation of chi B complexes in IL-2-secreting cells consisting mainly of heterodimeric p50/p65 complexes. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B B PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chi chi PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 probe probe ADV RB _ _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 generation generation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 chi chi ADJ JJ Degree=Pos _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 complexes complex NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 secreting secreting VERB VBG VerbForm=Ger _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 consisting consist VERB VBG VerbForm=Ger _ _ _ _ 39 mainly mainly ADV RB _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 42 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 p65 p65 NOUN NN Number=Sing _ _ _ _ 45 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4823 # text = A weaker chi B complex formation and faster-migrating complexes were detected in non-IL-2-secreting cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 weaker weaker NOUN NN Number=Sing _ _ _ _ 3 chi chi NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 migrating migrating NOUN NN Number=Sing _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 non-IL non-il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 secreting secreting VERB VBG VerbForm=Ger _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4824 # text = These results demonstrate that the IL-2 NF-chi B site is indispensable for the activity of the IL-2 promoter in EBV-transformed B cells, whereas other transcription factors appear to be less important for IL-2 expression in these cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 chi chi NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 indispensable indispensable ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 whereas whereas SCONJ IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ _ 36 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 be be AUX VB VerbForm=Inf _ _ _ _ 39 less less ADV RBR Degree=Cmp _ _ _ _ 40 important important ADJ JJ Degree=Pos _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 expression expression NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4825 # text = Document 003001357 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001357 003001357 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4826 # text = Prostaglandin E2 1 Prostaglandin Prostaglandin NOUN NN Number=Sing _ _ _ _ 2 E2 E2 NOUN NN Number=Sing _ _ _ _ # sent_id = 4827 # text = Up-regulates HIV-1 long terminal repeat-driven gene activity in T cells via NF-kappaB-dependent and -independent signaling pathways. 1 Up- Up- SYM NFP _ _ _ _ SpaceAfter=No 2 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 long long ADJ JJ Degree=Pos _ _ _ _ 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4828 # text = Replication of human immunodeficiency virus type-1 (HIV-1) is highly dependent on the state of activation of the infected cells and is modulated by interactions between viral and host cellular factors. 1 Replication Replication NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 state state NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 infected infect ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 interactions interaction NOUN NNS Number=Plur _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 host host VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4829 # text = Prostaglandin E2 (PGE2), a pleiotropic immunomodulatory molecule, is observed at elevated levels during HIV-1 infection as well as during the course of other pathogenic infections. 1 Prostaglandin Prostaglandin PROPN NNP Number=Sing _ _ _ _ 2 E2 E2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 PGE2 PGE2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 9 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 course course NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 31 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4830 # text = In 1G5, a Jurkat-derived T cell line stably transfected with a luciferase gene driven by HIV-1 long terminal repeat (LTR), we found that PGE2 markedly enhanced HIV-1 LTR-mediated reporter gene activity. 1 In in ADP IN _ _ _ _ _ 2 1G5 1G5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 stably stably ADV RB _ _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 33 markedly markedly ADV RB _ _ _ _ _ 34 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 reporter reporter NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4831 # text = Experiments have been conducted to identify second messengers involved in this PGE2-dependent up-regulating effect on the regulatory element of HIV-1. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 identify identify VERB VB VerbForm=Inf _ _ _ _ 7 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 messengers messenger NOUN NNS Number=Plur _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4832 # text = In this study, we present evidence indicating that signal transduction pathways induced by PGE2 necessitate the participation of cyclic AMP, protein kinase A, and Ca2+. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 PGE2 Pge2 NUM CD NumType=Card _ _ _ _ 16 necessitate necessitate NOUN NN Number=Sing _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 participation participation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 21 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4833 # text = Experiments conducted with different HIV-1 LTR-based vectors suggested that PGE2-mediated activation effect on HIV-1 transcription was transduced via both NF-kappaB-dependent and -independent signaling pathways. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 conducted conduct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 vectors vector NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 PGE2 Pge2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 via via ADP IN _ _ _ _ _ 27 both both DET DT _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 independent independent ADJ JJ Degree=Pos _ _ _ _ 36 signaling signaling NOUN NN Number=Sing _ _ _ _ 37 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4834 # text = The involvement of NF-kappaB in the PGE2-dependent activating effect on HIV-1 transcription was further confirmed using a kappaB-regulated luciferase encoding vector and by electrophoretic mobility shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 activating activate NOUN NN Number=Sing _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 further further ADV RB _ _ _ _ _ 21 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 28 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 29 vector vector NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 33 mobility mobility NOUN NN Number=Sing _ _ _ _ 34 shift shift NOUN NN Number=Sing _ _ _ _ 35 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4835 # text = Results from Northern blot and flow cytometric analyses, as well as the use of a selective antagonist indicated that PGE2 modulation of HIV-1 LTR-driven reporter gene activity in studied T lymphoid cells is transduced via the EP4 receptor subtype. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 Northern Northern PROPN NNP Number=Sing _ _ _ _ 4 blot blot PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 flow flow VERB VB VerbForm=Inf _ _ _ _ 7 cytometric cytometric ADJ JJ Degree=Pos _ _ _ _ 8 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 use use NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 selective selective ADJ JJ Degree=Pos _ _ _ _ 18 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 19 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 22 modulation modulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 via via ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 EP4 EP4 PROPN NNP Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 subtype subtype NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4836 # text = These results suggest that secretion of PGE2 by macrophages in response to infection or inflammatory activators could induce signaling events resulting in activation of proviral DNA present into T cells latently infected with HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 activators activator NOUN NNS Number=Plur _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 20 events event NOUN NNS Number=Plur _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 26 DNA Dna NOUN NN Number=Sing _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 latently latently ADV RB _ _ _ _ _ 32 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4837 # text = Document 003001358 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001358 003001358 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4838 # text = Inhibition of HIV-1 replication and NF-kappa B activity by cysteine and cysteine derivatives. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 17 derivatives derivative NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4839 # text = HIV-1 proviral DNA contains two binding sites for the transcription factor NF-kappa B. HIV-1-infected individuals have, on average, abnormally high levels of tumour necrosis factor alpha (TNF alpha) and abnormally low plasma cysteine levels. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -infected -infected ADJ JJ Degree=Pos _ _ _ _ 23 individuals individual NOUN NNS Number=Plur _ _ _ _ 24 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 average average NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 abnormally abnormally ADV RB _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 tumour tumour NOUN NN Number=Sing _ _ _ _ 34 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 TNF Tnf NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 abnormally abnormally ADV RB _ _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 plasma plasma NOUN NN Number=Sing _ _ _ _ 45 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 46 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4840 # text = We therefore investigated the effects of cysteine and related thiols on HIV-1 replication and NF-kappa B expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 thiols thiol NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4841 # text = The experiments in this report show that cysteine or N-acetylcysteine (NAC) raise the intracellular glutathione (GSH) level and inhibit HIV-1 replication in persistently infected Molt-4 and U937 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GSH GSH INTJ UH _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 persistently persistently ADV RB _ _ _ _ _ 31 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 Molt Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 4 4 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 U937 U937 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4842 # text = However, inhibition of HIV-1 replication appears not to be directly correlated with GSH levels. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 directly directly ADV RB _ _ _ _ _ 14 correlated correlated ADJ JJ Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 GSH Gsh DET DT _ _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4843 # text = Cysteine and NAC also inhibit NF-kappa B activity as determined by electrophoretic mobility shift assays and chloramphenicol acetyl-transferase (CAT) gene expression under control of NF-kappa B binding sites in uninfected cells. 1 Cysteine Cysteine PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 NAC NAC PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 15 mobility mobility NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 20 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 transferase transferase NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 gene gene ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 under under ADP IN _ _ _ _ _ 29 control control NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4844 # text = This suggests that the cysteine deficiency in HIV-1-infected individuals may cause an over-expression of NF-kappa B-dependent genes and enhance HIV-1 replication. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 6 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -infected -infect ADJ JJ Degree=Pos _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 over-expression over-expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 enhance enhance NOUN NN Number=Sing _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4845 # text = NAC may be considered for the treatment of HIV-1-infected individuals. 1 NAC Nac PROPN NNP Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4846 # text = Document 003001359 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001359 003001359 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4847 # text = Stimulation of HIV replication in mononuclear phagocytes by leukemia inhibitory factor. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 7 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4848 # text = This study examined the effects of leukemia inhibitory factor (LIF) on human immunodeficiency virus (HIV) replication in mononuclear phagocytes (MNP). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LIF LIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 replication replication NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 23 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 MNP MNP NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4849 # text = LIF induced a dose-dependent increase in p24 antigen production in the chronically infected promonocytic cell line U1. The magnitude and time kinetics of the LIF effects were similar to interleukin 1 (IL-1), IL-6, and tumor necrosis factor (TNF), other cytokines known to induce HIV replication in this cell line. 1 LIF LIF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 p24 p24 NUM CD NumType=Card _ _ _ _ 10 antigen antigen NUM CD NumType=Card _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 chronically chronically ADV RB _ _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 U1 u1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ 21 The the DET DT Definite=Def|PronType=Art _ _ _ _ 22 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LIF Lif PROPN NNP Number=Sing _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 similar similar ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 interleukin interleukin VERB VB VerbForm=Inf _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 tumor tumor NOUN NN Number=Sing _ _ _ _ 47 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 other other ADJ JJ Degree=Pos _ _ _ _ 54 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 55 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 induce induce PROPN NNP Number=Sing _ _ _ _ 58 HIV HIV PROPN NNP Number=Sing _ _ _ _ 59 replication replication NOUN NN Number=Sing _ _ _ _ 60 in in ADP IN _ _ _ _ _ 61 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 62 cell cell NOUN NN Number=Sing _ _ _ _ 63 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 4850 # text = To characterize mechanisms responsible for these LIF effects, levels of HIV mRNA, activation of the DNA binding protein nuclear factor (NF)-kB, signal transduction pathways, and potential interactions with other cytokines were analyzed. 1 To to ADP IN _ _ _ _ _ 2 characterize characterize NOUN NN Number=Sing _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 LIF Lif ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein ADV RB _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT : _ _ _ _ SpaceAfter=No 27 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 transduction transduction NOUN NN Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 potential potential ADJ JJ Degree=Pos _ _ _ _ 35 interactions interaction NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4851 # text = LIF increased steady-state levels of HIV mRNA at 2.0, 4.3, and 9.2 kB. 1 LIF Lif AUX VB VerbForm=Inf _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 state state NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 2.0 2.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 4.3 4.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 9.2 9.2 NUM CD NumType=Card _ _ _ _ 17 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4852 # text = This was detectable by 24 h and persisted until 72 h. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 24 24 NUM CD NumType=Card _ _ _ _ 6 h h NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 persisted persist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 until until ADP IN _ _ _ _ _ 10 72 72 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4853 # text = The DNA binding protein NF-kB is a central mediator in cytokine activation of HIV transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 kB kb PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 central central ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4854 # text = NF-kB 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kB kb PROPN NNP Number=Sing _ _ _ _ # sent_id = 4855 # text = levels were higher in unstimulated U1 cells as compared to the parent cell line U937. 1 levels level NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 higher higher ADJ JJR Degree=Cmp _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 6 U1 U1 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 parent parent NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4856 # text = In both cell lines LIF increased NF-kB activity. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 LIF Lif PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kB kb PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4857 # text = Induction of NF-kB and HIV replication by cytokines are at least in part dependent on reactive oxygen intermediates. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kB kb PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 part part ADJ JJ Degree=Pos _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 19 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 20 intermediates intermediate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4858 # text = The oxygen radical scavenger N-acetyl-L-cysteine, but not an inhibitor of nitric oxide synthase, inhibited LIF-induced HIV replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 radical radical ADJ JJ Degree=Pos _ _ _ _ 4 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 5 N- N- PUNCT : _ _ _ _ SpaceAfter=No 6 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -L -l ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 17 oxide oxide NOUN NN Number=Sing _ _ _ _ 18 synthase synthase NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 LIF LIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ _ 25 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4859 # text = LIF induces the production of other cytokines in monocytes but its effects on HIV replication were not inhibited by antibodies to IL-1, TNF, or IL-6. 1 LIF LIF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 effects effect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4860 # text = These results identify LIF as a stimulus of HIV replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 LIF LIF ADP RP _ _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4861 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4862 # text = Document 003001360 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001360 003001360 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4863 # text = Characterization of the murine cyclin-dependent kinase inhibitor gene p27Kip1. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4864 # text = The cyclin-dependent kinase inhibitor p27Kip1 plays an important role in regulating cell-cycle progression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4865 # text = p27Kip1 1 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ # sent_id = 4866 # text = directly inhibits the catalytic activity of cyclin/cdks (cyclin-dependent kinase) complexes and/or interferes physically with cyclin/cdks activation by CAK. 1 directly directly ADV RB _ _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 cdks cdk NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 or or CCONJ CC _ _ _ _ _ 20 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 physically physically ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 cdks cdk NOUN NNS Number=Plur _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 CAK CAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4867 # text = Interestingly, the expression level of p27Kip1 mRNA was maximal in resting Go T-cells and rapidly declined following anti-CD3 activation. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p27Kip1 p27Kip1 PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 resting rest VERB VBG VerbForm=Ger _ _ _ _ 13 Go go PROPN NNP Number=Sing _ _ _ _ 14 T- T- SYM NFP _ _ _ _ SpaceAfter=No 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 following follow VERB VBG VerbForm=Ger _ _ _ _ 20 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4868 # text = We report here the cloning of p27Kip1 gene from murine genomic DNA and the functional analysis of the promoter of the p27Kip1 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cloning cloning NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p27Kip1 p27Kip1 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 murine murine PRON PRP _ _ _ _ _ 11 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 functional functional ADJ JJ Degree=Pos _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4869 # text = The gene consists of at least three exons and spans more than 5.6 kb of DNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 exons exon NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 spans span NOUN NNS Number=Plur _ _ _ _ 11 more more ADJ JJR Degree=Cmp _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 5.6 5.6 NUM CD NumType=Card _ _ _ _ 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4870 # text = Primer extension and nuclease S1 protection analysis revealed two major transcription initiation sites. 1 Primer Primer NOUN NN Number=Sing _ _ _ _ 2 extension extension NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 nuclease nuclease NOUN NN Number=Sing _ _ _ _ 5 S1 s1 NOUN NN Number=Sing _ _ _ _ 6 protection protection NOUN NN Number=Sing _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4871 # text = The promoter region lacked a TATA box but contained potential binding sites for the transcriptional factors including two Sp1, CRE, Myb and NFkB located at positions -153, -178, -286, -875, and -1011, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 TATA TATa NOUN NN Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 potential potential NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Myb Myb PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NFkB NFkB PROPN NNP Number=Sing _ _ _ _ 26 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 positions position NOUN NNS Number=Plur _ _ _ _ 29 -153 -153 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 178 178 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 -286 -286 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 875 875 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 1011 1011 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4872 # text = To analyze the regulatory mechanisms controlling p27Kip1 gene expression, we characterized the 5'-flanking region from nt -1609 to +178. The -326 to -615 region contained positive regulatory elements. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 controlling control VERB VBG VerbForm=Ger _ _ _ _ 7 p27Kip1 p27kip1 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 nt not PART RB _ _ _ _ _ 21 -1609 -1609 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 + + SYM SYM _ _ _ _ SpaceAfter=No 24 178 178 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ 26 The the DET DT Definite=Def|PronType=Art _ _ _ _ 27 -326 -326 NUM CD NumType=Card _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 615 615 NUM CD NumType=Card _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 positive positive ADJ JJ Degree=Pos _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4873 # text = Document 003001361 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001361 003001361 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4874 # text = Nuclear factor of activated T cells and AP-1 are insufficient for IL-2 promoter activation: requirement for CD28 up-regulation of RE/AP. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 requirement requirement NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 23 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4875 # text = IL-2 gene transcription in T cells requires both TCR and costimulatory signals. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 TCR Tcr PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4876 # text = IL-2 promoter activation in Jurkat T cells stimulated with superantigen presented by Raji B cells requires CD28 activation. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 superantigen superantigen NOUN NNS Number=Plur _ _ _ _ 13 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Raji Raji PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4877 # text = The addition of rCTLA4 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 rCTLA4 rCTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 4878 # text = Ig, which blocks CD28 binding to its ligand, to the cultures decreased IL-2 promoter activation by >80%. Interestingly, CTLA4Ig did not significantly inhibit the activation of either NF of activated T cells (NFAT) or AP-1 reporters. 1 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cultures culture NOUN NNS Number=Plur _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 > > PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 80% 80% SYM NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ 24 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 Ig ig PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 significantly significantly ADV RB _ _ _ _ _ 31 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 either either CCONJ CC _ _ _ _ _ 36 NF Nf ADP IN _ _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 reporters reporter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4879 # text = Therefore, activation of NFAT and AP-1 is insufficient for IL-2 promoter activation. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4880 # text = In contrast, an RE/AP reporter was blocked by CTLA4Ig by >90%. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 RE re ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 AP ap NOUN NN Number=Sing _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 Ig ig PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 >90% >90% X XX _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4881 # text = Thus, the requirement for CD28 in IL-2 promoter activation appears to be due to RE/AP and not the NFAT or AP-1 sites. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 requirement requirement NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4882 # text = In addition, these data suggest that transcriptional activation of RE/AP is not mediated by NFAT, because activation of a NFAT reporter is not affected by the addition of CTLA4Ig. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 addition addition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4883 # text = Document 003001362 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001362 003001362 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4884 # text = Anoxia/reoxygenation-induced tolerance with respect to polymorphonuclear leukocyte adhesion to cultured endothelial cells. 1 Anoxia/ Anoxia/ SYM NFP _ _ _ _ SpaceAfter=No 2 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 respect respect NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 polymorphonuclear polymorphonuclear VERB VB VerbForm=Inf _ _ _ _ 10 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 cultured cultured VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4885 # text = A nuclear factor-kappaB-mediated phenomenon. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4886 # text = Exposing human umbilical vein endothelial cells (HUVECs) to anoxia/reoxygenation (A/R) results in an increase in polymorphonuclear leukocyte (PMN) adhesion to HUVECs. 1 Exposing Expose VERB VBG VerbForm=Ger _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 4 vein vein NOUN NN Number=Sing _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 anoxia anoxia ADP IN _ _ _ _ SpaceAfter=No 12 /reoxygenation /reoxygenation NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 A/ Aith NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 R R NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 increase increase NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 23 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMN PMN NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4887 # text = This A/R-induced hyperadhesion is completely prevented by a previous (24 hours earlier) exposure of HUVECs to A/R. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 A/R-induced A/R-induced ADJ JJ Degree=Pos _ _ _ _ 3 hyperadhesion hyperadhesion NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 completely completely ADV RB _ _ _ _ _ 6 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 previous previous ADJ JJ Degree=Pos _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 24 24 NUM CD NumType=Card _ _ _ _ 12 hours hour NOUN NNS Number=Plur _ _ _ _ 13 earlier earlier ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 exposure exposure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 A/R. A/R. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4888 # text = This phenomenon has been termed "A/R tolerance." 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 " " PUNCT `` _ _ _ _ SpaceAfter=No 7 A/R A/r ADJ JJ Degree=Pos _ _ _ _ 8 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpaceAfter=No 10 " " PUNCT '' _ _ _ _ _ # sent_id = 4889 # text = Exposing HUVECs to A/R induces an increase in nuclear factor kappaB (NF-kappaB) in HUVEC nuclei within 4 hours. 1 Exposing Expose VERB VBG VerbForm=Ger _ _ _ _ 2 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 A/R A/R PROPN NNP Number=Sing _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HUVEC Huvec PROPN NNP Number=Sing _ _ _ _ 19 nuclei nuclei PROPN NNP Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 4 4 NUM CD NumType=Card _ _ _ _ 22 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4890 # text = Interfering with either NF-kappaB activation (proteasome inhibitor) or translocation (double-stranded oligonucleotides containing NF-kappaB binding sequence) prevents the development of A/R tolerance (ie, the increase in A/R-induced PMN adhesion to HUVECs is the same after the first and second A/R challenges). 1 Interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 either either CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded stranded VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 development development NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 A/R A/r NOUN NN Number=Sing _ _ _ _ 31 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ie ie X FW _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 increase increase NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 A/R- A/R- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 PMN Pmn ADP IN _ _ _ _ _ 41 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 same same ADJ JJ Degree=Pos _ _ _ _ 47 after after ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 52 A/R A/r NOUN NN Number=Sing _ _ _ _ 53 challenges challenge NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4891 # text = NO production by HUVECs is increased after the second A/R challenge, but not after the first A/R challenge. 1 NO no DET DT _ _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 A/R A/r NOUN NN Number=Sing _ _ _ _ 11 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 A/R A/r NOUN NN Number=Sing _ _ _ _ 19 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4892 # text = Inhibition of NO synthase (NOS) during the second A/R challenge prevents the development of A/R tolerance with respect to PMN adhesion. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NO no DET DT _ _ _ _ _ 4 synthase synthase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NOS NOS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 A/R A/r NOUN NN Number=Sing _ _ _ _ 12 challenge challenge NOUN NN Number=Sing _ _ _ _ 13 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 A/R A/r ADJ JJ Degree=Pos _ _ _ _ 18 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 respect respect NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 PMN Pmn VERB VB VerbForm=Inf _ _ _ _ 23 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4893 # text = However, while HUVECs contained endothelial NOS protein, no inducible NOS was detected in either tolerant or nontolerant cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 HUVECs Huvecs NOUN NNS Number=Plur _ _ _ _ 5 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 NOS no NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 no no DET DT _ _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 NOS Nos PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 nontolerant nontolerant ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4894 # text = Further studies indicated that inhibition of GTP-cyclohydrolase I (an enzyme involved in de novo synthesis of an important cofactor for NOS activity, tetrahydrobiopterin) prevented the generation of NO in A/R-tolerant cells. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GTP GTP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cyclohydrolase cyclohydrolase NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 14 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 de de PROPN NNP Number=Sing _ _ _ _ 17 novo novo ADV RB _ _ _ _ _ 18 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 NOS NOS PROPN NNP Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 tetrahydrobiopterin tetrahydrobiopterin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 generation generation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NO no DET DT _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 A/R- A/R- X AFX _ _ _ _ SpaceAfter=No 36 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4895 # text = Extracellular generation of NO (NO donor) did not effect the hyperadhesion response induced by the initial A/R challenge. 1 Extracellular Extracellular ADJ JJ Degree=Pos _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NO no PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NO no DET DT _ _ _ _ _ 7 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 effect effect VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 hyperadhesion hyperadhesion NOUN NN Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 initial initial ADJ JJ Degree=Pos _ _ _ _ 19 A/R A/r NOUN NN Number=Sing _ _ _ _ 20 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4896 # text = A/R also induced an oxidant stress in naive HUVECs, but not in A/R-tolerant HUVECs. 1 A/R A/R ADV RB _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 6 stress stress NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 A/R- A/R- SYM NFP _ _ _ _ SpaceAfter=No 15 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4897 # text = Inhibition of NOS during the second A/R insult results in the generation of an oxidant stress similar to that observed after the first A/R challenge. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NOS no PROPN NNP Number=Sing _ _ _ _ 4 during during ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 A/R A/r NOUN NN Number=Sing _ _ _ _ 8 insult insult NOUN NN Number=Sing _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 generation generation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 16 stress stress NOUN NN Number=Sing _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 24 A/R A/r NOUN NN Number=Sing _ _ _ _ 25 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4898 # text = Taken together, the findings of the present study are consistent with a role for NF-kappaB in the development of A/R tolerance (with respect to PMN adhesion), perhaps by transcriptional regulation of GTP-cyclohydrolase. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 study study NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 A/R A/r PROPN NNP Number=Sing _ _ _ _ 24 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 with with ADP IN _ _ _ _ _ 27 respect respect NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 PMN Pmn X GW _ _ _ _ _ 30 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 perhaps perhaps ADV RB _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 GTP GTP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cyclohydrolase cyclohydrolase NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4899 # text = The increased NO production during the second A/R insult reduces PMN adhesion most likely by reducing the intracellular oxidant stress induced by A/R. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NO no DET DT _ _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 A/R A/r NOUN NN Number=Sing _ _ _ _ 9 insult insult NOUN NN Number=Sing _ _ _ _ 10 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 PMN PMN X GW _ _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 most most ADV RBS _ _ _ _ _ 14 likely likely ADV RB _ _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 19 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 A/ A/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 R. R. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4900 # text = Document 003001363 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001363 003001363 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4901 # text = Regulation of interleukin-2 receptor alpha chain expression and nuclear factor.kappa B activation by protein kinase C in T lymphocytes. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor.kappa factor.kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C C PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4902 # text = Autocrine role of tumor necrosis factor alpha. 1 Autocrine Autocrine PROPN NNP Number=Sing _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4903 # text = The regulation of interleukin-2 receptor alpha chain (IL-2R alpha) expression and nuclear factor (NF) activation by protein kinase C (PKC) in resting T cells, has been studied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2r NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 C C PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 resting rest VERB VBG VerbForm=Ger _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 38 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4904 # text = Treatment of human resting T cells with phorbol esters strongly induced the expression of IL-2R alpha and the activation of NF.kappa B. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 resting rest VERB VBG VerbForm=Ger _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 esters ester NOUN NNS Number=Plur _ _ _ _ 10 strongly strongly ADV RB _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2R 2R PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4905 # text = This activation was due to the translocation of p65 and c-Rel NF.kappa B proteins from cytoplasmic stores to the nucleus, where they bound the kappa B sequence of the IL-2R alpha promoter either as p50.p65 or as p50.c-Rel heterodimers. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 due due ADP IN _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 15 B B ADJ JJ Degree=Pos _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 stores store NOUN NNS Number=Plur _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 where where ADV WRB PronType=Rel _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2R 2r PROPN NNP Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 either either CCONJ CC _ _ _ _ _ 39 as as ADP IN _ _ _ _ _ 40 p50.p65 p50.p65 NUM CD NumType=Card _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 p50.c p50.c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Rel Rel NOUN NN Number=Sing _ _ _ _ 46 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4906 # text = Interestingly, all of those events were largely indirect and mediated by endogenously secreted tumor necrosis factor alpha (TNF alpha), as they were strongly inhibited by a neutralizing anti-TNF alpha monoclonal antibody. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 6 events event NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 largely largely ADV RB _ _ _ _ _ 9 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 endogenously endogenously ADV RB _ _ _ _ _ 14 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TNF Tnf NOUN NN Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 strongly strongly ADV RB _ _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 neutralizing neutralizing ADJ JJ Degree=Pos _ _ _ _ 32 anti-TNF anti-tnf NOUN NN Number=Sing _ _ _ _ 33 alpha alpha ADP IN _ _ _ _ _ 34 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 35 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4907 # text = Furthermore, cyclosporin A, which blocked TNF alpha production induced by PKC, strongly inhibited IL-2R alpha and NF.kappa B activation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclosporin cyclosporin ADP IN _ _ _ _ _ 4 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 strongly strongly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 23 B B PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4908 # text = The addition of either TNF alpha or IL-2 partially recovered cyclosporin A-induced IL-2R alpha inhibition, but only TNF alpha completely recovered NF.kappa B activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 alpha alpha PROPN NNP Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 partially partially ADV RB _ _ _ _ _ 12 recovered recover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha PROPN NNP Number=Sing _ _ _ _ 27 completely completely ADV RB _ _ _ _ _ 28 recovered recover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4909 # text = Those results indicate that, in resting T cells, PKC activation has only a triggering role, whereas the endogenously secreted TNF alpha plays an essential role in the quantitative control of the expression of IL-2R alpha chain or NF.kappa B activation. 1 Those those DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 resting rest VERB VBG VerbForm=Ger _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 PKC PKC PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 triggering triggering NOUN NN Number=Sing _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 endogenously endogenously ADV RB _ _ _ _ _ 22 secreted secret ADJ JJ Degree=Pos _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2R 2R PROPN NNP Number=Sing _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ _ 41 chain chain NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 44 B b PROPN NNP Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4910 # text = Document 003001364 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001364 003001364 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4911 # text = Octamer binding factors and their coactivator can activate the murine PU.1 (spi-1) promoter. 1 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 spi spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4912 # text = PU.1 (spi-1), a member of the Ets transcription factor family, is predominantly expressed in myeloid and B cells, activates many B cell and myeloid genes, and is critical for development of both of these lineages. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 spi spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 member member NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 predominantly predominantly ADV RB _ _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 many many ADJ JJ Degree=Pos _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 critical critical ADJ JJ Degree=Pos _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 development development NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 both both DET DT _ _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4913 # text = Our previous studies (Chen, H.M., Ray-Gallet, D., Zhang, P., Hetherington, C.J., Gonzalez, D.A., Zhang, D.-E., Moreau-Gachelin, F., and Tenen, D.G.(1995) Oncogene 11, 1549-1560) demonstrate that the PU.1 promoter directs cell type-specific reporter gene expression in myeloid cell lines, and that PU.1 activates its own promoter in an autoregulatory loop. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Chen Chen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 H.M. H.M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Ray Ray PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Gallet Gallet PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 D. D. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Zhang Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 P. P. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Hetherington Hetherington PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 C.J. C.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Gonzalez Gonzalez PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 D.A. D.A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Zhang Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 D.-E. D.-E. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 Moreau-Gachelin Moreau-Gachelin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 F. F. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Tenen Tenen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 D.G. D.G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 1995 1995 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 Oncogene Oncogene NOUN NN Number=Sing _ _ _ _ 43 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 1549 1549 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1560 1560 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 that that SCONJ IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 53 promoter promoter NOUN NN Number=Sing _ _ _ _ 54 directs directs NOUN NNS Number=Plur _ _ _ _ 55 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 specific specific ADJ JJ Degree=Pos _ _ _ _ 59 reporter reporter NOUN NN Number=Sing _ _ _ _ 60 gene gene NOUN NN Number=Sing _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 64 cell cell NOUN NN Number=Sing _ _ _ _ 65 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 and and CCONJ CC _ _ _ _ _ 68 that that SCONJ IN _ _ _ _ _ 69 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 70 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 71 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 72 own own ADJ JJ Degree=Pos _ _ _ _ 73 promoter promoter NOUN NN Number=Sing _ _ _ _ 74 in in ADP IN _ _ _ _ _ 75 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 76 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 77 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 4914 # text = Here we show that the murine PU.1 promoter is also specifically and highly functional in B cell lines as well. Oct-1 and Oct-2 can bind specifically to a site at base pair -55 in vitro, and this site is specifically protected in B cells in vivo. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 specifically specifically ADV RB _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ 22 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 -1 -1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 bind bind VERB VB VerbForm=Inf _ _ _ _ 30 specifically specifically ADV RB _ _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 base base NOUN NN Number=Sing _ _ _ _ 36 pair pair NOUN NN Number=Sing _ _ _ _ 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 55 55 NUM CD NumType=Card _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 site site NOUN NN Number=Sing _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 specifically specifically ADV RB _ _ _ _ _ 47 protected protect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 B b ADJ JJ Degree=Pos _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 4915 # text = We also demonstrate that two other sites contribute to promoter activity in B cells; an Sp1 binding site adjacent to the octamer site, and the PU.1 autoregulatory site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 adjacent adjacent NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 octamer octamer NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 29 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4916 # text = Finally, we show that the B cell coactivator OBF-1/Bob1/OCA-B is only expressed in B cells and not in myeloid cells, and that OBF-1/Bob1/OCA-B can transactivate the PU.1 promoter in HeLa and myeloid cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 10 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -1/Bob1/ -1/Bob1ith PUNCT HYPH _ _ _ _ SpaceAfter=No 12 OCA Oca NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -1/ -1ith PUNCT HYPH _ _ _ _ SpaceAfter=No 31 Bob1/OCA Bob1/OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 B b NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4917 # text = This B cell restricted coactivator may be responsible for the B cell specific expression of PU.1 mediated by the octamer site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4918 # text = Document 003001365 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001365 003001365 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4919 # text = Central nervous system-derived cells express a kappa B-binding activity that enhances human immunodeficiency virus type 1 transcription in vitro and facilitates TAR-independent transactivation by Tat. 1 Central Central ADJ JJ Degree=Pos _ _ _ _ 2 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 facilitates facilitate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 independent independent ADJ JJ Degree=Pos _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4920 # text = The 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ # sent_id = 4921 # text = Tat protein of human immunodeficiency virus type 1 (HIV-1) is a potent activator of long terminal repeat-directed transcription. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 potent potent NOUN NN Number=Sing _ _ _ _ 17 activator activator NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal NOUN NN Number=Sing _ _ _ _ 21 repeat repeat VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4922 # text = While in most cell types, activation requires interaction of Tat with the unusual transcription element TAR, astrocytic glial cells support TAR-independent transactivation of HIV-1 transcription by Tat. 1 While while SCONJ IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 most most ADJ JJS Degree=Sup _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Tat Tat PROPN NNP Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 TAR Tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 astrocytic astrocytic ADJ JJ Degree=Pos _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 independent independent ADJ JJ Degree=Pos _ _ _ _ 26 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4923 # text = This alternative pathway of Tat activation is mediated by the viral enhancer, a kappa B domain capable of binding the prototypical form of the transcription factor nuclear factor kappa B (NF-kappa B) present in many cell types, including T lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Tat Tat NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 capable capable ADJ JJ Degree=Pos _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 23 form form NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 present present ADJ JJ Degree=Pos _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 many many ADJ JJ Degree=Pos _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 including include VERB VBG VerbForm=Ger _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4924 # text = Tat transactivation mediated by the kappa B domain is sufficient to allow replication of TAR-deleted mutant HIV-1 in astrocytes. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 allow allow VERB VB VerbForm=Inf _ _ _ _ 13 replication replication NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TAR TAR ADV RB Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4925 # text = The present study demonstrates the existence of kappa B-specific binding factors present in human glial astrocytes that differ from prototypical NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 existence existence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 glial glial ADJ JJ Degree=Pos _ _ _ _ 17 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 22 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4926 # text = The novel astrocyte-derived kappa B-binding activity is retained on an HIV-1 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 astrocyte astrocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B- B- PUNCT , _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 4927 # text = Tat affinity column, while prototypical NF-kappa B from Jurkat T cells is not. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 affinity affinity NOUN NN Number=Sing _ _ _ _ 3 column column NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 while while SCONJ IN _ _ _ _ _ 6 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4928 # text = In vitro transcription studies demonstrate that astrocyte-derived kappa B-binding factors activate transcription of the HIV-1 long terminal repeat and that this activation is dependent on the kappa B domain. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 astrocyte astrocyte ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 activate activate ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ _ 22 terminal terminal NOUN NN Number=Sing _ _ _ _ 23 repeat repeat NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4929 # text = Moreover, TAR-independent transactivation of HIV-1 transcription is reproduced in vitro in an astrocyte factor-dependent manner which correlates with kappa B-binding activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TAR TAR ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 astrocyte astrocyte ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4930 # text = The importance of the central nervous system-enriched kappa B transcription factor in the regulation of HIV-1 expression is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4931 # text = Document 003001366 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001366 003001366 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4932 # text = Binding of YY1 and Oct1 to a novel element that downregulates expression of IL-5 in human T cells. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 YY1 YY1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Oct1 Oct1 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 downregulates downregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4933 # text = BACKGROUND: IL-5 controls development of eosinophilia and has been shown to be involved in the pathogenesis of allergic diseases. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 controls control NOUN NNS Number=Plur _ _ _ _ 7 development development NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 22 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4934 # text = In both atopic and nonatopic asthma, elevated IL-5 has been detected in peripheral blood and the airways. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 6 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 airways airway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4935 # text = IL-5 is produced mainly by activated T cells, and its expression is regulated at the transcriptional level. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 mainly mainly ADV RB _ _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4936 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4937 # text = This study focuses on the functional analysis of the human IL-5 (hIL-5) promoter and characterization of cis -regulatory elements and transcription factors involved in the suppression of IL-5 transcription in T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 focuses focus VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cis cis NOUN NN Number=Sing _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 suppression suppression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 5 5 NUM CD NumType=Card _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4938 # text = METHODS: Methods used in this study include DNase I footprint assays, electrophoretic mobility shift assays, and functional analysis by mammalian cell transfection involving deletion analysis and site-directed mutagenesis. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Methods method NOUN NNS Number=Plur _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 study study NOUN NN Number=Sing _ _ _ _ 8 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 DNase DNase NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 footprint footprint VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 15 mobility mobility NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 transfection transfection NOUN NN Number=Sing _ _ _ _ 26 involving involve VERB VBG VerbForm=Ger _ _ _ _ 27 deletion deletion NOUN NN Number=Sing _ _ _ _ 28 analysis analysis NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4939 # text = RESULTS: We identified 5 protein binding regions (BRs) located within the proximal hIL-5 promoter. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 regions region NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 BRs BRs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 16 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4940 # text = Functional analysis indicates that the BRs are involved in control of hIL-5 promoter activity. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 BRs BR NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 hIL hIL NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 5 5 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4941 # text = Two of these regions, BR3 and BR4 located at positions -102 to -73, have not previously been described as regulators of IL-5 expression in T cells. 1 Two two NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 BR3 BR3 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 BR4 BR4 NUM CD NumType=Card _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 positions position NOUN NNS Number=Plur _ _ _ _ 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 102 102 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 73 73 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 regulators regulator NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 5 5 NUM CD NumType=Card _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4942 # text = We show that the BR3 sequence contains a novel negative regulatory element located at positions -90 to -79 of the hIL-5 promoter, which binds Oct1, octamer-like, and YY1 nuclear factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 BR3 BR3 NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 positions position NOUN NNS Number=Plur _ _ _ _ 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 90 90 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 79 79 NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 Oct1 Oct1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 like like INTJ UH _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 YY1 YY1 NUM CD NumType=Card _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4943 # text = Substitution mutations, which abolished binding of these proteins to the BR3 sequence, significantly increased hIL-5 promoter activity in activated T cells. 1 Substitution Substitution NOUN NN Number=Sing _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 BR3 BR3 NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 activated activated ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4944 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4945 # text = We suggest that Oct1, YY1, and octamer-like factors binding to the -90/-79 sequence within the proximal IL-5 promoter are involved in suppression of IL-5 transcription in T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Oct1 oct1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 YY1 yy1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like SCONJ IN _ _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 90/-79 90/-79 NUM CD NumType=Card _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 suppression suppression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 5 5 NUM CD NumType=Card _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4946 # text = Document 003001367 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001367 003001367 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4947 # text = The role of BSAP (Pax-5) in B-cell development. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Pax Pax NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4948 # text = The hierarchy of transcriptional control in B-cell development has recently been analyzed by targeted gene inactivation in the mouse. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 control control NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4949 # text = In this manner, the paired box containing gene Pax-5, encoding the B cell specific transcription factor BSAP, has been shown to play a key role in early B lymphopoiesis. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 paired paire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 Pax Pax NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 cell cell PROPN NNP Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 play play VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 key key ADJ JJ Degree=Pos _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 lymphopoiesis lymphopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4950 # text = Other experimental strategies have implicated BSAP in the control of cell proliferation, isotype switching and transcription of the immunoglobulin heavy-chain gene at late stages of B-cell differentiation. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 3 strategies strategy NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 BSAP Bsap PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 isotype isotype NOUN NN Number=Sing _ _ _ _ 15 switching switching NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 21 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 late late ADJ JJ Degree=Pos _ _ _ _ 27 stages stage NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4951 # text = Document 003001368 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001368 003001368 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4952 # text = Elf-1 and Stat5 bind to a critical element in a new enhancer of the human interleukin-2 receptor alpha gene [published erratum appears in Mol Cell Biol 1997 Apr;17(4):2351] 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 6 bind bind NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 new new ADJ JJ Degree=Pos _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 erratum erratum NOUN NN Number=Sing _ _ _ _ 27 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Mol Mol PROPN NNP Number=Sing _ _ _ _ 30 Cell cell PROPN NNP Number=Sing _ _ _ _ 31 Biol Biol PROPN NNP Number=Sing _ _ _ _ 32 1997 1997 NUM CD NumType=Card _ _ _ _ 33 Apr;17 Apr;17 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 :2351 :2351 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4953 # text = The interleukin 2 receptor alpha-chain (IL-2R alpha) gene is a key regulator of lymphocyte proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 key key ADJ JJ Degree=Pos _ _ _ _ 16 regulator regulator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4954 # text = IL-2R alpha is rapidly and potently induced in T cells in response to mitogenic stimuli. 1 IL Il ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2R 2r NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 potently potently ADV RB _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 17 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4955 # text = Interleukin 2 (IL-2) stimulates IL-2R alpha transcription, thereby amplifying expression of its own high-affinity receptor. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 R r X GW _ _ _ _ _ 13 alpha alpha X FW Foreign=Yes _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 thereby thereby ADV RB _ _ _ _ _ 17 amplifying amplify VERB VBG VerbForm=Ger _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 own own ADJ JJ Degree=Pos _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4956 # text = IL-2R alpha transcription is at least in part controlled by two positive regulatory regions, PRRI and PRRII. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2R 2r VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 part part NOUN NN Number=Sing _ _ _ _ 11 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PRRI PRRI PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 PRRII PRRII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4957 # text = PRRI is an inducible proximal enhancer, located between nucleotides -276 and -244, which contains NF-kappaB and SRE/CArG motifs. 1 PRRI PRRI PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 proximal proximal NOUN NN Number=Sing _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 276 276 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 244 244 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 CArG CArG PROPN NNP Number=Sing _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4958 # text = PRRII is a T-cell-specific enhancer, located between nucleotides -137 and -64, which binds the T-cell-specific Ets protein Elf-1 and HMG-I(Y) proteins. 1 PRRII pRRIi PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 137 137 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 64 64 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 Ets et NOUN NNS Number=Plur _ _ _ _ 27 protein protein ADV WRB PronType=Rel _ _ _ _ 28 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 Y y ADV WRB PronType=Int _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4959 # text = However, none of these proximal regions account for the induction of IL-2R alpha transcription by IL-2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 none none NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 regions region NOUN NNS Number=Plur _ _ _ _ 8 account account NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2R 2R PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4960 # text = To find new regulatory regions of the IL-2R alpha gene, 8.5 kb of the 5' end noncoding sequence of the IL-2R alpha gene have been sequenced. 1 To to PART TO _ _ _ _ _ 2 find find VERB VB VerbForm=Inf _ _ _ _ 3 new new ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2r PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 8.5 8.5 NUM CD NumType=Card _ _ _ _ 15 kb kb NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ _ 20 end end NOUN NN Number=Sing _ _ _ _ 21 noncoding noncoding NOUN NN Number=Sing _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2r PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 sequenced sequence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4961 # text = We identified an 86-nucleotide fragment that is 90% identical to the recently characterized murine IL-2-responsive element (mIL-2rE). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 identical identical ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 recently recently ADV RB _ _ _ _ _ 16 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 murine murine NOUN NN Number=Sing _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 mIL mil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2rE 2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4962 # text = This putative human IL-2rE, designated PRRIII, confers IL-2 responsiveness on a heterologous promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2rE 2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 PRRIII pRRIIi NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 confers confer NOUN NNS Number=Plur _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4963 # text = PRRIII contains a Stat protein binding site that overlaps with an EBS motif (GASd/EBSd). 1 PRRIII Prriii PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 Stat Stat NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 EBS EBS PROPN NNP Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GASd/EBSd GASd/EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4964 # text = These are essential for IL-2 inducibility of PRRIII/CAT reporter constructs. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 essential essential ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 PRRIII PRRIII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 CAT cat ADJ JJ Degree=Pos _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4965 # text = IL-2 induced the binding of Stat5a and b proteins to the human GASd element. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 binding binding NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 b b NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 GASd Gasd PROPN NNP Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4966 # text = To confirm the physiological relevance of these findings, we carried out in vivo footprinting experiments which showed that stimulation of IL-2R alpha expression correlated with occupancy of the GASd element. 1 To to PART TO _ _ _ _ _ 2 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 5 relevance relevance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 out out ADP RP _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 16 experiments experiment NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2R 2R PROPN NNP Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 GASd GAS PROPN NNP Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4967 # text = Our data demonstrate a major role of the GASd/EBSd element in IL-2R alpha regulation and suggest that the T-cell-specific Elf-1 factor can serve as a transcriptional repressor. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GASd/EBSd GASd/EBSd PROPN NNP Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2R 2R PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 serve serve VERB VB VerbForm=Inf _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4968 # text = Document 003001369 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001369 003001369 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4969 # text = Identification of an inducible regulator of c-myb expression during T-cell activation. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 regulator regulator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 myb myb NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4970 # text = Resting T cells express very low levels of c-Myb protein. 1 Resting rest VERB VBG VerbForm=Ger _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 express express NOUN NNS Number=Plur _ _ _ _ 5 very very ADV RB _ _ _ _ _ 6 low low ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Myb Myb NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4971 # text = During T-cell activation, c-myb expression is induced and much of the increase in expression occurs at the transcriptional level. 1 During during ADP IN _ _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 myb myb NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induced induced ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 much much ADJ JJ Degree=Pos _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 occurs occur NOUN NNS Number=Plur _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4972 # text = We identified a region of the c-myb 5' flanking sequence that increased c-myb expression during T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 myb myb NOUN NN Number=Sing _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 myb myb NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4973 # text = In vivo footprinting by ligation-mediated PCR was performed to correlate in vivo protein binding with functional activity. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 footprinting footprinting VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 PCR Pcr PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4974 # text = A protein footprint was visible over this region of the c-myb 5' flanking sequence in activated T cells but not in unactivated T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 footprint footprint NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 visible visible ADJ JJ Degree=Pos _ _ _ _ 6 over over ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 myb myb NOUN NN Number=Sing _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4975 # text = An electrophoretic mobility shift assay (EMSA) with nuclear extract from activated T cells and an oligonucleotide of this binding site demonstrated a new protein-DNA complex, referred to as CMAT for c-myb in activated T cells; this complex was not present in unactivated T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 extract extract NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 binding binding ADJ JJ Degree=Pos _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 CMAT CMAT PROPN NNP Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 c- c- SYM NFP _ _ _ _ SpaceAfter=No 37 myb myb NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 activated activated ADJ JJ Degree=Pos _ _ _ _ 40 T T PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 complex complex NOUN NN Number=Sing _ _ _ _ 45 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 46 not not PART RB _ _ _ _ _ 47 present present ADJ JJ Degree=Pos _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 50 T T PROPN NNP Number=Sing _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4976 # text = Because the binding site showed some sequence similarity with the nuclear factor of activated T cells (NFAT) binding site, we compared the kinetics of induction of the two binding complexes and the molecular masses of the two proteins. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 some some DET DT _ _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 similarity similarity NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 complexes complex NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 37 masses mass NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 two two NUM CD NumType=Card _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4977 # text = Studies of the kinetics of induction showed that the NFAT EMSA binding complex appeared earlier than the CMAT complex. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 11 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 complex complex NUM CD NumType=Card _ _ _ _ 14 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4978 # text = The NFAT protein migrated more slowly in a sodium dodecyl sulfate-polyacrylamide gel than the CMAT protein did. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 migrated migrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 more more ADV RBR _ _ _ _ _ 6 slowly slowly ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 sodium sodium NOUN NN Number=Sing _ _ _ _ 10 dodecyl dodecyl NOUN NN Number=Sing _ _ _ _ 11 sulfate- sulfate- PUNCT : _ _ _ _ SpaceAfter=No 12 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 13 gel gel NOUN NN Number=Sing _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CMAT CMAT PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4979 # text = In addition, an antibody against NFAT did not cross-react with the CMAT protein. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 cross-react cross-react VERB VB VerbForm=Inf _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4980 # text = The appearance of the CMAT binding complex was inhibited by both cyclosporin A and rapamycin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CMAT CMAT NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 13 A a NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4981 # text = The CMAT protein appears to be a novel inducible protein involved in the regulation of c-myb expression during T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel ADJ JJ Degree=Pos _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 myb myb NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4982 # text = Document 003001370 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001370 003001370 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4983 # text = Unicellular-unilineage erythropoietic cultures: molecular analysis of regulatory gene expression at sibling cell level. 1 Unicellular Unicelular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 4 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 at at SCONJ IN _ _ _ _ _ 14 sibling sibl VERB VBG VerbForm=Ger _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4984 # text = In vitro studies on hematopoietic control mechanisms have been hampered by the heterogeneity of the analyzed cell populations, ie, lack of lineage specificity and developmental stage homogeneity of progenitor/precursor cells growing in culture. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 6 control control NOUN NN Number=Sing _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 hampered hamper VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 heterogeneity heterogeneity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 ie ie X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lack lack NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ _ 25 specificity specificity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 28 stage stage NOUN NN Number=Sing _ _ _ _ 29 homogeneity homogeneity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 progenitor progenitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 precursor precursor NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 growing grow VERB VBG VerbForm=Ger _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4985 # text = We developed unicellular culture systems for unilineage differentiation of purified hematopoietic progenitor cells followed by daughter cell analysis at cellular and molecular level. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 unicellular unicellular ADJ JJ Degree=Pos _ _ _ _ 4 culture culture NOUN NN Number=Sing _ _ _ _ 5 systems system NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 unilineage unilineage NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 daughter daughter NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4986 # text = In the culture system reported here, (1) the growth factor (GF) stimulus induces cord blood (CB) progenitor cells to proliferate and differentiate/mature exclusively along the erythroid lineage; (2) this erythropoietic wave is characterized by less than 4% apoptotic cells; (3) asymmetric divisions are virtually absent, ie, nonresponsive hematopoietic progenitors with no erythropoietic potential are forced into apoptosis; (4) the system is cell division controlled (cdc), ie, the number of divisions performed by each cell is monitored. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 culture culture NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GF gf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 cord cord NOUN NN Number=Sing _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CB CB NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 differentiate differentiate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 mature mature ADJ JJ Degree=Pos _ _ _ _ 32 exclusively exclusively ADV RB _ _ _ _ _ 33 along along ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 36 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 43 wave wave NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 less less ADJ JJR Degree=Cmp _ _ _ _ 48 than than ADP IN _ _ _ _ _ 49 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 % % SYM NN Number=Sing _ _ _ _ 51 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 ; ; PUNCT , _ _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 3 3 X LS _ _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 asymmetric asymmetric ADJ JJ Degree=Pos _ _ _ _ 58 divisions division NOUN NNS Number=Plur _ _ _ _ 59 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 60 virtually virtually ADV RB _ _ _ _ _ 61 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 ie ie X FW _ _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 nonresponsive nonresponsive ADJ JJ Degree=Pos _ _ _ _ 66 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 67 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 68 with with ADP IN _ _ _ _ _ 69 no no DET DT _ _ _ _ _ 70 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 71 potential potential NOUN NN Number=Sing _ _ _ _ 72 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 73 forced force VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 74 into into ADP IN _ _ _ _ _ 75 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 ; ; PUNCT , _ _ _ _ _ 77 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 78 4 4 X LS _ _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ _ 80 the the DET DT Definite=Def|PronType=Art _ _ _ _ 81 system system NOUN NN Number=Sing _ _ _ _ 82 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 83 cell cell NOUN NN Number=Sing _ _ _ _ 84 division division NOUN NN Number=Sing _ _ _ _ 85 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 86 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 87 cdc cdc NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 89 , , PUNCT , _ _ _ _ _ 90 ie ie X FW _ _ _ _ SpaceAfter=No 91 , , PUNCT , _ _ _ _ _ 92 the the DET DT Definite=Def|PronType=Art _ _ _ _ 93 number number NOUN NN Number=Sing _ _ _ _ 94 of of ADP IN _ _ _ _ _ 95 divisions division NOUN NNS Number=Plur _ _ _ _ 96 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 97 by by ADP IN _ _ _ _ _ 98 each each DET DT _ _ _ _ _ 99 cell cell NOUN NN Number=Sing _ _ _ _ 100 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 101 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 102 . . PUNCT . _ _ _ _ _ # sent_id = 4987 # text = Single-cell reverse transcriptase-polymerase chain reaction (RT-PCR) analysis was applied to this culture system to investigate gene expression of diverse receptors, markers of differentiation, and transcription factors (EKLF, GATA-1, GATA-2, p45 NF-E2, PU.1, and SCL/Tal1) at discrete stages of erythropoietic development. 1 Single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 reaction reaction NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RT-PCR RT-PCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 analysis analysis NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 system system NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 26 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 markers marker NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 p45 p45 NUM CD NumType=Card _ _ _ _ 47 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 / / PUNCT , _ _ _ _ SpaceAfter=No 56 Tal1 Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ _ 58 at at ADP IN _ _ _ _ _ 59 discrete discrete NOUN NN Number=Sing _ _ _ _ 60 stages stage NOUN NNS Number=Plur _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 63 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 4988 # text = Freshly isolated CD34(+) cells expressed CD34, c-kit, PU.1, and GATA-2 but did not express CD36, erythropoietin receptor (EpoR), SCL/Tal1, EKLF, NF-E2, GATA-1, or glyocophorin A (GPA). 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 CD34 Cd34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 +) +) PUNCT -RRB- _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CD34 Cd34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 kit kit NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 express express VERB VB VerbForm=Inf _ _ _ _ 23 CD36 Cd36 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 /Tal1 /Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 glyocophorin glyocophorin NOUN NN Number=Sing _ _ _ _ 46 A A PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 GPA gpa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4989 # text = In early to intermediate stages of erythroid differentiation we monitored the induction of CD36, Tal1, EKLF, NF-E2, and GATA-1 that preceeded expression of EpoR. 1 In in ADP IN _ _ _ _ _ 2 early early ADV RB Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 5 stages stage NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 CD36 Cd36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Tal1 Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 preceeded proceeed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4990 # text = In late stages of erythroid maturation, GPA was upregulated, whereas CD34, c-kit, PU.1, and GATA-2 were barely or not detected. 1 In in ADP IN _ _ _ _ _ 2 late late ADJ JJ Degree=Pos _ _ _ _ 3 stages stage NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 6 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 GPA gpa PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 kit kit NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 barely barely ADV RB _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4991 # text = In addition, competitive single-cell RT-PCR was used to assay CD34 mRNA transcripts in sibling CD34(+) CD38(-) cells differentiating in unilineage erythroid cultures: this analysis allowed us to semiquantitate the gradual downmodulation of CD34 mRNA from progenitor cells through their differentiating erythroid progeny. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 5 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 PCR Pcr NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 assay assay VERB VB VerbForm=Inf _ _ _ _ 15 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 34 34 NUM CD NumType=Card _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 19 in in SCONJ IN _ _ _ _ _ 20 sibling sibl VERB VBG VerbForm=Ger _ _ _ _ 21 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 +) +) SYM NFP _ _ _ _ _ 24 CD38 CD38 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 (-) (-) PUNCT . _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 31 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 : : PUNCT : _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 analysis analysis NOUN NN Number=Sing _ _ _ _ 35 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 semiquantitate semiquantitate VERB VB VerbForm=Inf _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 gradual gradual ADJ JJ Degree=Pos _ _ _ _ 41 downmodulation downmodulation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 34 34 NUM CD NumType=Card _ _ _ _ 45 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 46 from from ADP IN _ _ _ _ _ 47 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 through through ADP IN _ _ _ _ _ 50 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 51 differentiating differentiat NOUN NN Number=Sing _ _ _ _ 52 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 53 progeny progeny NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4992 # text = It is concluded that this novel culture system, coupled with single-cell RT-PCR analysis, may eliminate the ambiguities intrinsic to molecular studies on heterogeneous populations of hematopoietic progenitors/precursors growing in culture, particularly in the initial stages of development. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 culture culture NOUN NN Number=Sing _ _ _ _ 8 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 PCR Pcr NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 eliminate eliminate VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ambiguities ambiguity NOUN NNS Number=Plur _ _ _ _ 24 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 studies study NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 30 populations population NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 33 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 precursors precursor NOUN NNS Number=Plur _ _ _ _ 36 growing grow VERB VBG VerbForm=Ger _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 particularly particularly ADV RB _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 initial initial ADJ JJ Degree=Pos _ _ _ _ 44 stages stage NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4993 # text = Document 003001371 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001371 003001371 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4994 # text = Nuclear factor-kappaB-dependent induction of interleukin-8 gene expression by tumor necrosis factor alpha: 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor-kappaB factor-kappab ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 8 8 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ _ 13 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ # sent_id = 4995 # text = evidence for an antioxidant sensitive activating pathway distinct from nuclear translocation. 1 evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 5 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 6 activating activate NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4996 # text = Tumor necrosis factor alpha (TNFalpha) is a pluripotent activator of inflammation by inducing a proinflammatory cytokine cascade. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pluripotent pluripotent ADJ JJ Degree=Pos _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4997 # text = This phenomenon is mediated, in part, through inducible expression of the CXC chemokine, interleukin-8 (IL-8). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CXC CXC PROPN NNP Number=Sing _ _ _ _ 15 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4998 # text = In this study, we investigate the role of TNFalpha-inducible reactive oxygen species (ROS) in IL-8 expression by "monocyte-like" U937 histiocytic lymphoma cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 14 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ROS Ros X ADD _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 8 8 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 " " PUNCT `` _ _ _ _ SpaceAfter=No 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like INTJ UH _ _ _ _ SpaceAfter=No 29 " " PUNCT `` _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 histiocytic histiocytic ADJ JJ Degree=Pos _ _ _ _ 32 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4999 # text = TNFalpha is a rapid activator of IL-8 gene expression by U937, producing a 50-fold induction of mRNA within 1 hour of treatment. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 producing produce VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fold fold NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 hour hour NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5000 # text = In gene transfection assays, the effect of TNFalpha requires the presence of an inducible nuclear factor-kappaB (NF-kappaB) (Rel A) binding site in the IL-8 promoter. 1 In in ADP IN _ _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 Rel Rel NOUN NN Number=Sing _ _ _ _ 26 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 8 8 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5001 # text = TNFalpha treatment induces a rapid translocation of the 65 kD transcriptional activator NF-kappaB subunit, Rel 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 6 translocation translocation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 65 65 NUM CD NumType=Card _ _ _ _ 10 kD kd NOUN NN Number=Sing _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 Rel Rel PROPN NNP Number=Sing _ _ _ _ # sent_id = 5002 # text = A, whose binding in the nucleus occurs before changes in intracellular ROS. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus ADJ JJ Degree=Pos _ _ _ _ 8 occurs occur NOUN NNS Number=Plur _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5003 # text = Pretreatment (or up to 15 minutes posttreatment) relative to TNFalpha with the antioxidant dimethyl sulfoxide (DMSO) (2% [vol/vol]) blocks 80% of NF-kappaB-dependent transcription. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 or or CCONJ CC _ _ _ _ _ 4 up up ADV RB _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 15 15 NUM CD NumType=Card _ _ _ _ 7 minutes minute NOUN NNS Number=Plur _ _ _ _ 8 posttreatment posttreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 relative relative ADV RB _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 16 dimethyl dimethyl NOUN NN Number=Sing _ _ _ _ 17 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 vol vol INTJ UH _ _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 vol vol NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 blocks block NOUN NNS Number=Plur _ _ _ _ 31 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 % % SYM NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5004 # text = Surprisingly, however, DMSO has no effect on inducible Rel A binding. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 however however ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 DMSO DMSO PROPN NNP Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5005 # text = Similar selective effects on NF-kappaB transcription are seen with the unrelated antioxidants, N-acetylcysteine (NAC) and vitamin C. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 unrelated unrelated ADJ JJ Degree=Pos _ _ _ _ 14 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 N- N- SYM NFP _ _ _ _ SpaceAfter=No 17 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 vitamin vitamin PROPN NNP Number=Sing _ _ _ _ 23 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5006 # text = These data indicate that TNFalpha induces a delayed ROS-dependent signalling pathway that is required for NF-kappaB transcriptional activation and is separable from that required for its nuclear translocation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 delayed delay ADJ JJ Degree=Pos _ _ _ _ 9 ROS Ros NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 signalling signalling NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 separable separable ADJ JJ Degree=Pos _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5007 # text = Further definition of this pathway will yield new insights into inflammation initiated by TNFalpha signalling. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 definition definition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 will will AUX MD VerbForm=Fin _ _ _ _ 7 yield yield VERB VB VerbForm=Inf _ _ _ _ 8 new new ADJ JJ Degree=Pos _ _ _ _ 9 insights insight NOUN NNS Number=Plur _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 15 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5008 # text = Document 003001372 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001372 003001372 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5009 # text = Epithelial cell-initiated inflammation plays a crucial role in early tissue damage in amebic infection of human intestine. 1 Epithelial Epithelial ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 6 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ _ 13 damage damage NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 16 infection infection NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 intestine intestine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5010 # text = BACKGROUND & AIMS: Entamoeba histolytica infection of the intestine can induce severe gut inflammation. 1 BACKGROUND background PROPN NNP Number=Sing _ _ _ _ 2 & & CCONJ CC _ _ _ _ _ 3 AIMS aim PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Entamoeba Entamoeba PROPN NNP Number=Sing _ _ _ _ 6 histolytica histolytica NOUN NN Number=Sing _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 intestine intestine NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 gut gut NOUN NN Number=Sing _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5011 # text = The aims of this study were to assess the role of the host inflammatory response in the tissue damage observed with amebiasis and the role of the intestinal epithelial cell in initiating that response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aims aim NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 were be VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 assess assess VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 host host ADV RBS _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 tissue tissue NOUN NN Number=Sing _ _ _ _ 19 damage damage NOUN NN Number=Sing _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 amebiasis amebiasis NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 29 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5012 # text = METHODS: E. histolytica infection was established in human intestinal xenografts in severe combined immunodeficient (SCID-HU-INT) mice. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 E. e. PROPN NNP Number=Sing _ _ _ _ 4 histolytica histolytican NOUN NN Number=Sing _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 11 xenografts xenograft NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 immunodeficient immunodeficient ADJ JJ Degree=Pos _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 SCID Scid PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 INT INT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5013 # text = Human intestinal epithelial cell inflammatory responses to amebic infection were inhibited by the intraluminal administration of an antisense oligonucleotide to the human p65 subunit of nuclear factor kappaB, and the role of neutrophils in tissue damage observed with amebiasis was studied by depleting neutrophils from SCID-HU-INT mice. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 3 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 intraluminal intraluminal ADJ JJ Degree=Pos _ _ _ _ 15 administration administration NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 antisense antisense NOUN NN Number=Sing _ _ _ _ 19 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 p65 p65 NOUN NN Number=Sing _ _ _ _ 24 subunit subunit NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 tissue tissue NOUN NN Number=Sing _ _ _ _ 37 damage damage NOUN NN Number=Sing _ _ _ _ 38 observed observe ADJ JJ Degree=Pos _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 amebiasis amebiasis PRON DT Number=Sing|PronType=Dem _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 by by SCONJ IN _ _ _ _ _ 44 depleting deplet VERB VBG VerbForm=Ger _ _ _ _ 45 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 46 from from ADP IN _ _ _ _ _ 47 SCID SCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 INT Int ADJ JJ Degree=Pos _ _ _ _ 52 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5014 # text = RESULTS: 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 5015 # text = Administration of the antisense oligonucleotide blocked the production of human interleukin 1beta and interleukin 8 by intestinal epithelial cells and inhibited neutrophil influx into the E. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 5 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 6 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 16 8 8 NUM CD NumType=Card _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 19 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 24 influx influx NOUN NN Number=Sing _ _ _ _ 25 into into ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5016 # text = histolytica-infected intestinal xenografts. 1 histolytica histolytican AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 2 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 4 xenografts xenograft NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 5017 # text = Inhibition of the gut inflammatory response by the antisense oligonucleotide or the depletion of neutrophils from SCID-HU- INT mice blocked the increase in intestinal permeability observed with amebic infection. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 gut gut ADJ JJ Degree=Pos _ _ _ _ 5 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 10 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 depletion depletion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 SCID SCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ _ 21 INT Int PROPN NNP Number=Sing _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ _ 23 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 28 permeability permeability NOUN NN Number=Sing _ _ _ _ 29 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 32 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5018 # text = CONCLUSIONS: Intestinal epithelial cells initiate an inflammatory response with resulting neutrophil-mediated tissue damage in response to E. histolytica infection; this inflammatory cascade can be blocked by inhibiting the transcription of genes regulated by nuclear factor kappaB. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Intestinal Intestinal ADJ JJ Degree=Pos _ _ _ _ 4 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 initiate initiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 with with SCONJ IN _ _ _ _ _ 11 resulting result VERB VBG VerbForm=Ger _ _ _ _ 12 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 tissue tissue NOUN NN Number=Sing _ _ _ _ 16 damage damage NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 E. e. PROPN NNP Number=Sing _ _ _ _ 21 histolytica histolytica PROPN NNP Number=Sing _ _ _ _ 22 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 cascade cascade NOUN NN Number=Sing _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5019 # text = Document 003001373 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001373 003001373 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5020 # text = A novel heterodimerization partner for thyroid hormone receptor. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ _ 4 partner partner NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 5021 # text = Peroxisome proliferator-activated receptor. 1 Peroxisome Peroxisome NOUN NN Number=Sing _ _ _ _ 2 proliferator- proliferator- PUNCT : _ _ _ _ SpaceAfter=No 3 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5022 # text = Retinoid-like receptors play a central role in hormonal responses by forming heterodimers with other nuclear hormone receptors. 1 Retinoid Retinoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 central central ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 11 responses response NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 forming form VERB VBG VerbForm=Ger _ _ _ _ 14 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 hormone hormone NOUN NN Number=Sing _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5023 # text = In this study we have identified the peroxisome proliferator-activated receptor (PPAR) as a new thyroid hormone receptor (THR) auxiliary nuclear protein, heterodimerizing with THR in solution. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 peroxisome peroxisome ADJ JJ Degree=Pos _ _ _ _ 9 proliferator- proliferator- X AFX _ _ _ _ SpaceAfter=No 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PPAR PPAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 new new ADJ JJ Degree=Pos _ _ _ _ 18 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 19 hormone hormone NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 THR Thr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 auxiliary auxiliary ADJ JJ Degree=Pos _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 heterodimerizing heterodimerize VERB VBG VerbForm=Ger _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 THR Thr NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 solution solution NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5024 # text = Although these heterodimers do not recognize a classical thyroid hormone response element (TRE) characterized by direct repeat separated by four nucleotides (DR+4), PPAR behaves as a dominant negative regulator of thyroid hormone (TH) action. 1 Although although SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 4 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 recognize recognize VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 classical classical ADJ JJ Degree=Pos _ _ _ _ 9 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 10 hormone hormone NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 direct direct ADJ JJ Degree=Pos _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ _ 20 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 four four NUM CD NumType=Card _ _ _ _ 23 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 DR Dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 PPAR PPAR PROPN NNP Number=Sing _ _ _ _ 31 behaves behave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 35 negative negative ADJ JJ Degree=Pos _ _ _ _ 36 regulator regulator NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 39 hormone hormone NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TH th NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5025 # text = However, a TH-dependent positive effect is elicited by selective interaction of the THR beta-PPAR but not the THR alpha-PPAR heterodimer with a novel TRE (DR+2). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 TH th NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 positive positive ADJ JJ Degree=Pos _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 elicited elicit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 selective selective ADJ JJ Degree=Pos _ _ _ _ 13 interaction interaction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 THR Thr PROPN NNP Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 PPAR Ppar NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 THR Thr NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 PPAR Ppar NOUN NN Number=Sing _ _ _ _ 27 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 novel novel NOUN NN Number=Sing _ _ _ _ 31 TRE Tre NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 DR dr NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 + + SYM SYM _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5026 # text = The critical region of THR beta was mapped to 3 amino acids in the distal box of the DNA binding domain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 THR Thr NOUN NN Number=Sing _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 amino amino DET DT _ _ _ _ _ 12 acids acid NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 distal distal ADJ JJ Degree=Pos _ _ _ _ 16 box box NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5027 # text = Hence, PPAR can positively or negatively influence TH action depending on TRE structure and THR isotype. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PPAR PPAR PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 positively positively ADV RB _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 negatively negatively ADV RB _ _ _ _ _ 8 influence influence NOUN NN Number=Sing _ _ _ _ 9 TH th NOUN NN Number=Sing _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 depending depend VERB VBG VerbForm=Ger _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 TRE Tre NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 THR Thr NOUN NN Number=Sing _ _ _ _ 17 isotype isotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5028 # text = Document 003001374 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001374 003001374 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5029 # text = Induction of CIITA and modification of in vivo HLA-DR promoter occupancy in normal thymic epithelial cells treated with IFN-gamma: similarities and distinctions with respect to HLA-DR-constitutive B cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 modification modification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo PROPN NNP Number=Sing _ _ _ _ 9 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DR dr PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 17 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 : : PUNCT : _ _ _ _ _ 25 similarities similarity NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 distinctions distinction NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 respect respect NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 DR- DR- SYM NFP _ _ _ _ SpaceAfter=No 34 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5030 # text = In this study, the IFN-gamma induction of MHC class II gene expression in primary cultures of thymic epithelial cells (TEC) was analyzed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 primary primary ADJ JJ Degree=Pos _ _ _ _ 18 cultures culture NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 21 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TEC TEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5031 # text = This cellular system offers the advantage that MHC class II induction is studied in a "physiologic" cell lineage that, as a result of this expression within the thymus, is thought to participate to the selection and maturation of the T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ _ 4 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 advantage advantage NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 " " PUNCT `` _ _ _ _ SpaceAfter=No 17 physiologic physiologic NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 " " PUNCT '' _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 result result NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 within within ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 participate participate VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 selection selection NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 maturation maturation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5032 # text = It was found that the MHC class II gene expression was associated with the de novo transcription of the gene encoding the CIITA trans-activator, a crucial MHC class II gene regulatory factor. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 de de NOUN NN Number=Sing _ _ _ _ 16 novo novo NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 24 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 30 MHC MHC PROPN NNP Number=Sing _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5033 # text = Furthermore, the anatomy of interaction between the MHC class II DRA promoter and corresponding binding factors was analyzed by in vivo DNAse I footprint. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 anatomy anatomy NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 DRA DRa NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 corresponding correspond VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vivo vivo NOUN NN Number=Sing _ _ _ _ 23 DNAse DNAse NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 footprint footprint VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5034 # text = It was found that treatment with IFN-gamma induces changes in the occupancy of the DRA gene regulatory sequences by nuclear factors. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 changes change NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 DRA DRA PROPN NNP Number=Sing _ _ _ _ 18 gene gene VERB VB VerbForm=Inf _ _ _ _ 19 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 20 sequences sequence NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5035 # text = The resulting occupancy displays strong similarities with the one observed in the MHC class II-constitutive B cells, represented by both the Burkitt lymphoma line Raji and normal tonsil- derived B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 resulting result VERB VBG VerbForm=Ger _ _ _ _ 3 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 4 displays display NOUN NNS Number=Plur _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 similarities similarity NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 one one NOUN NN Number=Sing _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 MHC MHC PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 26 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ _ 28 Raji Raji PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 tonsil tonsil NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5036 # text = However, some peculiar differences were observed between the TEC, either IFN-gamma-induced or not, and the constitutive B cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 some some DET DT _ _ _ _ _ 4 peculiar peculiar ADJ JJ Degree=Pos _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TEC Tec NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 IFN-gamma IFN-gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 not not PART RB _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5037 # text = These results suggest that both common mechanisms, such as the one mediated by the CIITA trans-activator, and distinct tissue-specific constraints contribute to the transcriptional control of constitutive and IFN-gamma-induced MHC class II gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 common common ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 one one NOUN NN Number=Sing _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 17 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 tissue- tissue- PUNCT , _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 constraints constraint NOUN NNS Number=Plur _ _ _ _ 26 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 IFN- IFN- SYM SYM _ _ _ _ SpaceAfter=No 35 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 MHC MHC PROPN NNP Number=Sing _ _ _ _ 39 class class NOUN NN Number=Sing _ _ _ _ 40 II ii NUM CD NumType=Card _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5038 # text = Document 003001375 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001375 003001375 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5039 # text = Glucocorticoid-mediated repression of cytokine gene transcription in human arteritis-SCID chimeras. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 SCID Scid NOUN NN Number=Sing _ _ _ _ 14 chimeras chimera NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5040 # text = Giant cell arteritis (GCA) is a vasculitic syndrome that preferentially affects medium and large-sized arteries. 1 Giant giant ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GCA GCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 vasculitic vasculitic ADJ JJ Degree=Pos _ _ _ _ 10 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 preferentially preferentially ADV RB _ _ _ _ _ 13 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 medium medium ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 large large ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sized size VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 arteries artery NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5041 # text = Glucocorticoid therapy resolves clinical symptoms within hours to days, but therapy has to be continued over several years to prevent disease relapses. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 therapy therapy NOUN NN Number=Sing _ _ _ _ 3 resolves resolf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 hours hour NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 therapy therapy NOUN NN Number=Sing _ _ _ _ 13 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 continued continue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 over over ADP IN _ _ _ _ _ 18 several several ADJ JJ Degree=Pos _ _ _ _ 19 years year NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ _ 23 relapses relaps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5042 # text = It is not known whether and how glucocorticoids affect the function of the inflammatory infiltrate or why the disease persists subclinically despite chronic treatment. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 9 affect affect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 infiltrate infiltrate NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 why why ADV WRB PronType=Int _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 disease disease NOUN NN Number=Sing _ _ _ _ 20 persists persist NOUN NNS Number=Plur _ _ _ _ 21 subclinically subclinically ADV RB _ _ _ _ _ 22 despite despite ADP IN _ _ _ _ _ 23 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5043 # text = GCA is self-sustained in temporal arteries engrafted into SCID mice, providing a model in which the mechanisms of action and limitations of glucocorticoid therapy can be examined in vivo. 1 GCA GCa PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 8 arteries arteries NOUN NNS Number=Plur _ _ _ _ 9 engrafted engraft VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 SCID Scid NOUN NN Number=Sing _ _ _ _ 12 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 providing provide VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 model model NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 action action NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 limitations limitation NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 27 therapy therapy NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 5044 # text = Administration of dexamethasone to temporal artery-SCID chimeras for 1 wk induced a partial suppression of T cell and macrophage function as indicated by the reduced tissue concentrations of IL-2, IL-1beta, and IL-6 mRNA, and by the diminished expression of inducible NO synthase. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 6 artery artery NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 SCID Scid NOUN NN Number=Sing _ _ _ _ 9 chimeras chimera NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 wk wk NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 partial partial ADJ JJ Degree=Pos _ _ _ _ 16 suppression suppression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 tissue tissue NOUN NN Number=Sing _ _ _ _ 29 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ _ 44 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 diminished diminished VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 53 NO no ADJ JJ Degree=Pos _ _ _ _ 54 synthase synthase NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5045 # text = In contrast, synthesis of IFN-gamma mRNA was only slightly decreased, and expression of TGF-beta1 was unaffected. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 slightly slightly ADV RB _ _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta1 beta1 NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5046 # text = These findings correlated with activation of the IkappaBalpha gene and blockade of the nuclear translocation of NFkappaB in the xenotransplanted tissue. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 blockade blockade NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 translocation translocation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 xenotransplanted xenotransplant VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5047 # text = Dose-response experiments suggested that steroid doses currently used in clinical medicine are suboptimal in repressing NFkappaB-mediated cytokine production in the inflammatory lesions. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 response response NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 8 doses dos NOUN NNS Number=Plur _ _ _ _ 9 currently currently ADV RB _ _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 13 medicine medicine NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 repressing repress VERB VBG VerbForm=Ger _ _ _ _ 18 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5048 # text = Chronic steroid therapy was able to deplete the T cell products IL-2 and IFN-gamma, whereas the activation of tissue-infiltrating macrophages was only partially affected. 1 Chronic Chronic PROPN NNP Number=Sing _ _ _ _ 2 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 therapy therapy NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 deplete deplete VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 products product NOUN NNS Number=Plur _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 26 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 partially partially ADV RB _ _ _ _ _ 30 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5049 # text = IL-1beta transcription was abrogated; in contrast, TGF-beta1 mRNA synthesis was steroid resistant. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 ; ; PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 beta1 beta1 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 steroid steroid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5050 # text = The persistence of TGF-beta1-transcribing macrophages, despite paralysis of T cell function, may provide an explanation for the chronicity of the disease, and may identify a novel therapeutic target in this inflammatory vasculopathy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 persistence persistence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta1 beta1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 transcribing transcribing VERB VBG VerbForm=Ger _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 despite despite ADP IN _ _ _ _ _ 12 paralysis paralysis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 provide provide VERB VB VerbForm=Inf _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 explanation explanation NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 chronicity chronicity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 identify identify VERB VB VerbForm=Inf _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 novel novel NOUN NN Number=Sing _ _ _ _ 34 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 35 target target NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 39 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5051 # text = Document 003001376 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001376 003001376 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5052 # text = Human tumor necrosis factor alpha gene regulation in phorbol ester stimulated T and B cell lines. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 tumor tumor NOUN NN Number=Sing _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 alpha alpha ADP IN _ _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 10 ester ester NOUN NN Number=Sing _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5053 # text = The minimal region of the human tumor necrosis factor alpha (TNF-alpha) gene promoter necessary for its transcriptional induction by phorbol esters (PMA) in human T and B lymphocyte cell lines has been localized between -52 and +89 nucleotides (nt) relative to the gene's transcriptional start site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 25 esters ester NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 B benefit ADJ JJ Degree=Pos _ _ _ _ 34 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 lines line NOUN NNS Number=Plur _ _ _ _ 37 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 between between ADP IN _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 52 52 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 + + SYM SYM _ _ _ _ SpaceAfter=No 45 89 89 NUM CD NumType=Card _ _ _ _ 46 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 nt not PART RB _ _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 relative relative ADV RB _ _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 's 's PART POS _ _ _ _ _ 55 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 56 start start NOUN NN Number=Sing _ _ _ _ 57 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 5054 # text = Comparison of these sequences to those required to mediate virus or lipopolysaccharide (LPS) induction of the gene reveal significant differences, and thus, the sequence requirements for PMA induction are distinct from those that mediate induction by virus or LPS. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 differences difference NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 requirements requirement NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 37 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 38 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 virus virus NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5055 # text = Although three sites in the TNF-alpha promoter (kappa 1, kappa 2, and kappa 3) specifically bind the transcription factor NF-kappa B in lymphoid nuclear extracts, TNF-alpha mRNA induction by PMA does not correlate with NF-kappa B binding activities displayed by different T and B cell lines. 1 Although although SCONJ IN _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 3 3 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 specifically specifically ADV RB _ _ _ _ _ 22 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 PMA PMA PROPN NNP Number=Sing _ _ _ _ 42 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappa kappa NOUN NN Number=Sing _ _ _ _ 49 B b NOUN NN Number=Sing _ _ _ _ 50 binding bind VERB VBG VerbForm=Ger _ _ _ _ 51 activities activity NOUN NNS Number=Plur _ _ _ _ 52 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 different different ADJ JJ Degree=Pos _ _ _ _ 55 T T PROPN NNP Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 B b ADJ JJ Degree=Pos _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 5056 # text = Moreover, kappa 1-kappa 3 can each be deleted from the TNF-alpha promoter with little effect on the gene's inducibility by PMA. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 little little ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5057 # text = Therefore, TNF-alpha mRNA induction by PMA, like its induction by virus and LPS, is not primarily mediated by NF-kappa B, but rather is mediated through other sequences and protein factors. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha X FW Foreign=Yes _ _ _ _ 6 mRNA mRNA X GW _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 like like ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 primarily primarily ADV RB _ _ _ _ _ 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 rather rather ADV RB _ _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5058 # text = Surprisingly, multimers of kappa 1-kappa 3 can confer PMA inducibility on a heterologous promoter in a B (Raji), but not a T (HUT78) cell line. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 multimers multimer NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 confer confer VERB VB VerbForm=Inf _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Raji Raji PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 T T NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 HUT78 HUT78 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5059 # text = However they are not functional on a truncated TNF-alpha promoter, indicating that promoter context and cell type specificity influence the PMA inducible function of these NF-kappa B binding sites. 1 However however ADV RB _ _ _ _ _ 2 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 context context NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 specificity specificity NOUN NN Number=Sing _ _ _ _ 22 influence influence NOUN NN Number=Sing _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 PMA PMA PROPN NNP Number=Sing _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5060 # text = Document 003001377 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001377 003001377 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5061 # text = Differential expression and phosphorylation of CTCF, a c-myc transcriptional regulator, during differentiation of human myeloid cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CTCF CTCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 myc myc ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5062 # text = CTCF is a transcriptional repressor of the c-myc gene. 1 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 repressor repressor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 myc myc ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5063 # text = Although CTCF has been characterized in some detail, there is very little information about the regulation of CTCF activity. 1 Although although SCONJ IN _ _ _ _ _ 2 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 some some DET DT _ _ _ _ _ 8 detail detail NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 very very ADV RB _ _ _ _ _ 13 little little ADJ JJ Degree=Pos _ _ _ _ 14 information information NOUN NN Number=Sing _ _ _ _ 15 about about ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CTCF CTCF ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5064 # text = Therefore we investigated CTCF expression and phosphorylation during induced differentiation of human myeloid leukemia cells. 1 Therefore therefore ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5065 # text = We found that: (i) both CTCF mRNA and protein are down-regulated during terminal differentiation in most cell lines tested; (ii) CTCF down-regulation is retarded and less pronounced than that of c-myc; (iii) CTCF protein is differentially phosphorylated and the phosphorylation profiles depend on the differentiation pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 i i X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein VERB VB VerbForm=Inf _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 down down ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 ii ii X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 CTCF CTCF ADP IN _ _ _ _ _ 30 down down ADV RB _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 retarded retarded ADJ JJ Degree=Pos _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 less less ADV RBR Degree=Cmp _ _ _ _ 37 pronounced pronounce ADJ JJ Degree=Pos _ _ _ _ 38 than than ADP IN _ _ _ _ _ 39 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 iii iii X LS _ _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 CTCF Ctcf NOUN NN Number=Sing _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 differentially differentially ADV RB _ _ _ _ _ 50 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 54 profiles profile NOUN NNS Number=Plur _ _ _ _ 55 depend depend VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 on on ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 59 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 5066 # text = We concluded that CTCF expression and activity is controlled at transcriptional and post-transcriptional levels. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 concluded conclude VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 post-transcriptional post-transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5067 # text = Document 003001378 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001378 003001378 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5068 # text = Mapping of the interaction site of the defective transcription factor in the class II major histocompatibility complex mutant cell line clone-13 to the divergent X2-box. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 class class NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 17 complex complex ADJ JJ Degree=Pos _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -13 -13 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 divergent divergent NOUN NN Number=Sing _ _ _ _ 26 X2 x2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5069 # text = We have previously described a mutant B lymphoblastoid cell line, Clone-13, that expresses HLA-DQ in the absence of HLA-DR and -DP. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Clone Clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 DQ Dq PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 DR dr PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 DP. DP. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5070 # text = Several criteria indicated that the defect in this cell line influences the activity of an isotype-specific transcription factor. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 criteria criterion NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 defect defect NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5071 # text = Indeed, transient transfection of HLA-DRA and DQB reporter constructs indicated that the affected factor operates via cis-elements located between -141 base pairs and the transcription initiation site. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transient transient ADJ JJ Degree=Pos _ _ _ _ 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 DRA DRA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 DQB DQB PROPN NNP Number=Sing _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 constructs construct NOUN NNS Number=Plur _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 operates operate NOUN NNS Number=Plur _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 141 141 NUM CD NumType=Card _ _ _ _ 27 base base NOUN NN Number=Sing _ _ _ _ 28 pairs pair NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 initiation initiation NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5072 # text = A series of hybrid DRA/DQB reporter constructs was generated to further map the relevant cis-elements in this system. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 series series NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 5 DRA DRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 DQB Dqb PROPN NNP Number=Sing _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 further further ADV RB _ _ _ _ _ 14 map map VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 17 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5073 # text = Insertion of oligonucleotides spanning the DQB X-box (but not the DQB-W region or the DQB Y-box) upstream of -141 in a DRA reporter plasmid rescued expression to nearly wild-type levels. 1 Insertion Insertion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 4 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DQB DQB PROPN NNP Number=Sing _ _ _ _ 7 X x PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DQB DQB NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 W W ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DQB DQB PROPN NNP Number=Sing _ _ _ _ 21 Y- y- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 141 141 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 DRA DRA PROPN NNP Number=Sing _ _ _ _ 31 reporter reporter NOUN NN Number=Sing _ _ _ _ 32 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 33 rescued rescue VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 nearly nearly ADV RB _ _ _ _ _ 37 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 type type NOUN NN Number=Sing _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5074 # text = Substitution promoters were then generated where the entire X-box, or only the X1- or X2-boxes of HLA-DRA were replaced with the analogous regions of HLA-DQB. 1 Substitution Substitution NOUN NN Number=Sing _ _ _ _ 2 promoters promoter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 where where ADV WRB PronType=Int _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 entire entire ADJ JJ Degree=Pos _ _ _ _ 9 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 X1 X1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 boxes boxe NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DRA DRA PROPN NNP Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 31 regions region NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 DQB DQB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5075 # text = The DQB X2-box was able to restore expression to the silent DRA reporter construct. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DQB DQB NOUN NN Number=Sing _ _ _ _ 3 X2 x2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 box box NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 restore restore VERB VB VerbForm=Inf _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 silent silent ADJ JJ Degree=Pos _ _ _ _ 14 DRA DRa NOUN NN Number=Sing _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5076 # text = Moreover, replacement of the DQB X2-box with the DRA X2-box markedly diminished the activity of the DQB promoter in the mutant cell. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 replacement replacement NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DQB DQB PROPN NNP Number=Sing _ _ _ _ 7 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 DRA DRa NOUN NN Number=Sing _ _ _ _ 13 X2 X2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 box box NOUN NN Number=Sing _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DQB DQB PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5077 # text = None of the hybrid reporter constructs were defective when transfected into the wild-type, HLA-DR/-DQ positive parental cell line, Jijoye. 1 None none NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hybrid hybrid ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DR/- Dr/- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 DQ Dq NOUN NN Number=Sing _ _ _ _ 21 positive positive ADJ JJ Degree=Pos _ _ _ _ 22 parental parental ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Jijoye Jijoye PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5078 # text = These studies suggest that the divergent X2-box of the class II major histocompatibility complex promoters plays an important role in influencing differential expression of the human class II isotypes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 7 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 promoters promoter NOUN NNS Number=Plur _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 24 differential differential ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 isotypes isotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5079 # text = Document 003001379 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001379 003001379 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5080 # text = Multiple transcription factors are required for activation of human interleukin 9 gene in T cells. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 9 9 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5081 # text = The genetic elements and regulatory mechanisms responsible for human interleukin 9 (IL-9) gene expression in a human T cell leukemia virus type I-transformed human T cell line, C5MJ2, were investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 9 9 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 type type NOUN NN Number=Sing _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 28 - - PUNCT : _ _ _ _ SpaceAfter=No 29 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 C5MJ2 C5mj2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5082 # text = We demonstrated that IL-9 gene expression is controlled, at least in part, by transcriptional activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 9 9 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5083 # text = Transient expression of the luciferase reporter gene linked to serially deleted sequences of the 5'-flanking region of the IL-9 gene has revealed several positive and negative regulatory elements involved in the basal and inducible expression of the IL-9 gene in C5MJ2 cells. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 serially serially ADV RB _ _ _ _ _ 11 deleted delete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 sequences sequence NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 19 region region NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 9 9 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 positive positive ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ _ 34 involved involved ADJ JJ Degree=Pos _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 basal basal ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 9 9 NUM CD NumType=Card _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 C5MJ2 C5MJ2 NUM CD NumType=Card _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 5084 # text = An AP-1 site at -146 to -140 was shown to be involved in the expression of the IL-9 gene. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 146 146 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 140 140 NUM CD NumType=Card _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 9 9 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5085 # text = A proximal region between -46 and -80 was identified as the minimum sequence for the basal and inducible expression of the IL-9 gene in C5MJ2 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 -46 -46 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 80 80 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minimum minimum ADJ JJ Degree=Pos _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 basal basal ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 9 9 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 C5MJ2 C5MJ2 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5086 # text = Within this region, an NF-kappaB site at -59 to -50 and its adjacent 20-base pair upstream sequence were demonstrated to play a critical role for the IL-9 promoter activity. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 59 59 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 50 50 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 19 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 base base NOUN NN Number=Sing _ _ _ _ 22 pair pair NOUN NN Number=Sing _ _ _ _ 23 upstream upstream NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 9 9 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5087 # text = DNA-protein binding studies indicated that NF-kappaB, c-Jun, and potentially novel proteins (around 35 kDa) can bind to this important sequence. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 potentially potentially ADV RB _ _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 around around ADV RB _ _ _ _ _ 21 35 35 NUM CD NumType=Card _ _ _ _ 22 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 bind bind VERB VB VerbForm=Inf _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5088 # text = Mutations at different sites within this proximal promoter region abolished the promoter activity as well as the DNA binding. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 different different ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5089 # text = Taken together, these results suggest that the cooperation of different transcription factors is essential for IL-9 gene expression in T cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 9 9 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5090 # text = Document 003001380 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001380 003001380 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5091 # text = AML1 (CBFalpha2) cooperates with B cell-specific activating protein (BSAP/PAX5) in activation of the B cell-specific BLK gene promoter. 1 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CB Cb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 Falpha2 falpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 activating activating NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 PAX5 PAX5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 BLK Blk NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5092 # text = AML1 plays a critical role during hematopoiesis and chromosomal translocations involving AML1 are commonly associated with different forms of leukemia, including pre-B acute lymphoblastic leukemia. 1 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 2 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 critical critical ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 10 translocations translocation NOUN NNS Number=Plur _ _ _ _ 11 involving involve VERB VBG VerbForm=Ger _ _ _ _ 12 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 commonly commonly ADV RB _ _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 forms form NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 pre pre X AFX _ _ _ _ SpaceAfter=No 24 -B -b X GW _ _ _ _ _ 25 acute acute X ADD _ _ _ _ _ 26 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 27 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5093 # text = To understand the function of AML1 during B cell differentiation, we analyzed regulatory regions of B cell-specific genes for potential AML1-binding sites and have identified a putative AML1-binding site in the promoter of the B cell-specific tyrosine kinase gene, blk. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 regions region NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 potential potential ADJ JJ Degree=Pos _ _ _ _ 24 AML1 Aml1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 putative putative ADJ JJ Degree=Pos _ _ _ _ 33 AML1 Aml1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 specific specific ADJ JJ Degree=Pos _ _ _ _ 46 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 blk blk NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5094 # text = Gel mobility shift assays and transient transfection assays demonstrate that AML1 binds specifically to this site in the blk promoter and this binding site is important for blk promoter activity. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transient transient ADJ JJ Degree=Pos _ _ _ _ 7 transfection transfection NOUN NN Number=Sing _ _ _ _ 8 assays assay NOUN NNS Number=Plur _ _ _ _ 9 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 AML1 AML1 NUM CD NumType=Card _ _ _ _ 12 binds bind NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 blk blk NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 blk blk ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5095 # text = Furthermore, in vitro binding analysis revealed that the AML1 runt DNA-binding domain physically interacts with the paired DNA-binding domain of BSAP, a B cell-specific transcription factor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 11 runt runt NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 physically physically ADV RB _ _ _ _ _ 17 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 paired paire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5096 # text = BSAP has been shown previously to be important for B cell-specific regulation of the blk gene. 1 BSAP Bsap SYM NFP _ _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 blk blk ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5097 # text = Physical interaction of AML1 with BSAP correlates with functional cooperativity in transfection studies where AML1 and BSAP synergistically activate blk promoter transcription by more than 50-fold. 1 Physical physical ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 7 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 cooperativity cooperativity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 transfection transfection NOUN NN Number=Sing _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 where where ADV WRB PronType=Rel _ _ _ _ 15 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 BSAP Bsap PROPN NNP Number=Sing _ _ _ _ 18 synergistically synergistically ADV RB _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 blk blk NOUN NN Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 more more ADJ JJR Degree=Cmp _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5098 # text = These results demonstrate physical and functional interactions between AML1 and BSAP and suggest that AML1 is an important factor for regulating a critical B cell-specific gene, blk. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 physical physical ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 interactions interaction NOUN NNS Number=Plur _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 blk blk NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5099 # text = Document 003001381 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001381 003001381 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5100 # text = A shortened life span of EKLF-/- adult erythrocytes, due to a deficiency of beta-globin chains, is ameliorated by human gamma-globin chains. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 shortened shortened ADJ JJ Degree=Pos _ _ _ _ 3 life life NOUN NN Number=Sing _ _ _ _ 4 span span NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -/- -/- PUNCT . _ _ _ _ _ 8 adult adult NOUN NN Number=Sing _ _ _ _ 9 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 ameliorated ameliorate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 globin globin NOUN NN Number=Sing _ _ _ _ 28 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5101 # text = Using homologous recombination, both EKLF alleles in murine embryonic stem (ES) cells were inactivated. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 3 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 EKLF Eklf NOUN NN Number=Sing _ _ _ _ 7 alleles allele NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 murine murine ADJ JJ Degree=Pos _ _ _ _ 10 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 11 stem stem NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 ES E INTJ UH _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inactivated inactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5102 # text = These EKLF-/- ES cells were capable of undergoing in vitro differentiation to form definitive erythroid colonies that were similar in size and number to those formed by wild-type ES cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -/- -/- PUNCT . _ _ _ _ _ 4 ES ES ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 capable capable ADJ JJ Degree=Pos _ _ _ _ 8 of of SCONJ IN _ _ _ _ _ 9 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 form form VERB VB VerbForm=Inf _ _ _ _ 15 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 colonies colony NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 size size NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 number number NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 27 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 type type NOUN NN Number=Sing _ _ _ _ 32 ES e ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5103 # text = However, the EKLF-/- colonies were poorly hemoglobinized and enucleated erythrocytes in these colonies contained numerous Heinz bodies. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 EKLF Eklf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -/- -/- PUNCT . _ _ _ _ _ 6 colonies coloney NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 poorly poorly ADV RB _ _ _ _ _ 9 hemoglobinized hemoglobinize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 enucleated enucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 colonies colony NOUN NNS Number=Plur _ _ _ _ 16 contained containe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 18 Heinz Heinz NOUN NN Number=Sing _ _ _ _ 19 bodies body NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5104 # text = Reverse transcriptase-polymerase chain reaction (RT-PCR) analyses revealed that adult and embryonic globin genes were appropriately regulated, with the exception of beta h1-globin, which continued to be expressed at a very low level. 1 Reverse reverse NOUN NN Number=Sing _ _ _ _ 2 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 5 chain chain NOUN NN Number=Sing _ _ _ _ 6 reaction reaction NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RT-PCR Rt-pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 analyses analysis NOUN NNS Number=Plur _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 adult adult NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 appropriately appropriately ADV RB _ _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 exception exception NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ _ 27 h1 h1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 -globin -globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 continued continue VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 very very ADV RB _ _ _ _ _ 38 low low ADJ JJ Degree=Pos _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5105 # text = The ratio of adult beta-globin/alpha-globin mRNA in the mutant ES cells was 1/15 of that in wild-type ES cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ratio ratio NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 adult adult NOUN NN Number=Sing _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -globin/ -globin/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 alpha-globin alpha-globin ADJ JJ Degree=Pos _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 12 ES ES ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 1/15 1/15 NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 ES ES ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5106 # text = When the EKLF-/- cells were injected into blastocysts, they did not contribute at a detectable level to the mature erythrocyte compartment of the chimeric animals, based on analysis of glucose phosphate isomerase-1 (GPI-1) isozymes and hemoglobins that distinguish ES cell-derived erythrocytes from host blastocyst-derived erythrocytes. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -/- -/- PUNCT . _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 injected inject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 blastocysts blastocyst NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mature mature ADJ JJ Degree=Pos _ _ _ _ 22 erythrocyte erythrocyte NOUN NN Number=Sing _ _ _ _ 23 compartment compartment NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 27 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 analysis analysis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 glucose glucose NOUN NN Number=Sing _ _ _ _ 34 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 35 isomerase isomerase NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 GPI GPI NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 isozymes isozyme NOUN NNS Number=Plur _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 hemoglobins hemoglobin NOUN NNS Number=Plur _ _ _ _ 46 that that PRON WDT PronType=Rel _ _ _ _ 47 distinguish distinguish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 ES ES ADV RB _ _ _ _ _ 49 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 53 from from ADP IN _ _ _ _ _ 54 host host NOUN NN Number=Sing _ _ _ _ 55 blastocyst blastocyst NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 5107 # text = In contrast, semiquantitative RT-PCR analysis of RNA from reticulocytes of the same chimeric animals suggested that the ES cell-derived reticulocytes were present at a level of 6% to 8%. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 5 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PCR Pcr NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 RNA RNA PROPN NNP Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 17 animals animal NOUN NNS Number=Plur _ _ _ _ 18 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ES ES PROPN NNPS Number=Plur _ _ _ _ 22 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 8% 8% X XX _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5108 # text = This indicated that the EKLF-/- erythrocytes in adult animals must be short-lived, apparently due to the imbalance of beta- versus alpha-globin chains, leading to the precipitation of excess alpha-globin chains to form Heinz bodies. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 /- /- PUNCT . _ _ _ _ _ 8 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adult adult ADJ JJ Degree=Pos _ _ _ _ 11 animals animal NOUN NNS Number=Plur _ _ _ _ 12 must must AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -lived -live VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 apparently apparently ADV RB _ _ _ _ _ 18 due due ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 versus versus CCONJ CC _ _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 globin globin NOUN NN Number=Sing _ _ _ _ 29 chains chains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 leading lead VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 precipitation precipitation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 excess excess NOUN NN Number=Sing _ _ _ _ 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 globin globin NOUN NN Number=Sing _ _ _ _ 40 chains chain NOUN NNS Number=Plur _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 form form VERB VB VerbForm=Inf _ _ _ _ 43 Heinz Heinz PROPN NNP Number=Sing _ _ _ _ 44 bodies body NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5109 # text = Consistent with this hypothesis, the short life span was ameliorated by introduction into the EKLF-/- ES cells of a human LCR/gamma-globin gene, as evidenced by the presence of ES cell-derived reticulocytes as well as mature erythrocytes in the blood of the chimeric animals. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 short short ADJ JJ Degree=Pos _ _ _ _ 8 life life NOUN NN Number=Sing _ _ _ _ 9 span span NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 ameliorated ameliorate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 introduction introduction NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 EKLF Eklf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -/- -/- PUNCT . _ _ _ _ _ 18 ES E VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 LCR/ Lcr/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 globin globin NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 presence presence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 ES ES PROPN NNP Number=Sing _ _ _ _ 36 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 40 as as ADV RB _ _ _ _ _ 41 well well ADV RB Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 mature mature ADJ JJ Degree=Pos _ _ _ _ 44 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 blood blood NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 51 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5110 # text = Document 003001382 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001382 003001382 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5111 # text = Identification of transcriptional suppressor proteins that bind to the negative regulatory element of the human immunodeficiency virus type 1. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5112 # text = Two different proteins which independently bound to neighboring sequences within the negative regulatory element (NRE) of human immunodeficiency virus type 1 (HIV-1) were detected in the nuclear extract of a virus-infected human T cell line. 1 Two two NUM CD NumType=Card _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 independently independently ADV RB _ _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 to to SCONJ IN _ _ _ _ _ 8 neighboring neighbore VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 extract extract NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5113 # text = One of the factors bound to a novel dyad symmetrical sequence. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 dyad dyad NOUN NN Number=Sing _ _ _ _ 10 symmetrical symmetrical ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5114 # text = This sequence is well conserved in various HIV-1 isolates and partial homology was found with the promoter region of the human retinoblastoma gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 various various ADJ JJ Degree=Pos _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 isolates isolate NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 partial partial ADJ JJ Degree=Pos _ _ _ _ 14 homology homology NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5115 # text = Similar DNA binding activity was detected in a variety of virus-uninfected human T cell lines and HeLa cells by means of a gel mobility shift assay. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 variety variety NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 uninfected uninfect ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 means means NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 gel gel NOUN NN Number=Sing _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5116 # text = The other factor bound to a putative AP-1 recognition sequence predicted for the HIV-1 NRE. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 bound bound ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 putative putative ADJ JJ Degree=Pos _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 recognition recognition NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 NRE Nre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5117 # text = However, this factor did not bind to a typical AP-1 site. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 bind bind VERB VB VerbForm=Inf _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 typical typical ADJ JJ Degree=Pos _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5118 # text = The insertion of multiple copies of the binding site for the former or latter factor into a heterologous promoter reduced the promoter activity to one-tenth or one-third, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 insertion insertion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 former former ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 tenth tenth NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 third third NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5119 # text = Thus, each factor may function as a novel negative regulator of transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 each each DET DT _ _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 function function VERB VB VerbForm=Inf _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5120 # text = Document 003001383 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001383 003001383 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5121 # text = E3, a hematopoietic-specific transcript directly regulated by the retinoic acid receptor alpha. 1 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5122 # text = Retinoic acid (RA)-induced maturation mediated by the retinoic acid receptor alpha (RAR alpha) has been implicated in myeloid development. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 maturation maturation NOUN NN Number=Sing _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RAR Rar NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 25 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5123 # text = We have used differential hybridization analysis of a cDNA library constructed from the murine RA-inducible MPRO promyelocyte cell line to identify immediate-early genes induced by RA during granulocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 differential differential ADJ JJ Degree=Pos _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 10 library library NOUN NN Number=Sing _ _ _ _ 11 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 murine murine PROPN NNP Number=Sing _ _ _ _ 15 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 MPRO Mpro NOUN NN Number=Sing _ _ _ _ 19 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 identify identify VERB VB VerbForm=Inf _ _ _ _ 24 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 RA RA PROPN NNP Number=Sing _ _ _ _ 31 during during ADP IN _ _ _ _ _ 32 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5124 # text = E3, one of nine sequences identified, was upregulated in an immediate-early manner, with transcript levels peaking after 60 minutes exposure to RA. 1 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nine nine NUM CD NumType=Card _ _ _ _ 6 sequences sequence NOUN NNS Number=Plur _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 60 60 NUM CD NumType=Card _ _ _ _ 24 minutes minute NOUN NNS Number=Plur _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 RA. RA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5125 # text = E3 transcripts were RA-inducible in HL60 cells, but not in an RA-resistant subclone, HL60R, that harbors a mutated RAR alpha gene. 1 E3 E3 NUM CD NumType=Card _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HL60 HL60 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 RA RA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 subclone subclone NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 HL60R Hl60r NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 harbors harbor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 RAR Rar NOUN NN Number=Sing _ _ _ _ 27 alpha alpha ADP IN _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5126 # text = However, when HL60R cells were transduced with a functional copy of the RAR alpha gene, RA induced a 10-fold increase in E3 mRNA levels. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 HL60R Hl60r ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 copy copy NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 RAR RAR PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha ADP IN _ _ _ _ _ 16 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 RA RA PROPN NNP Number=Sing _ _ _ _ 19 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 fold fold NOUN NN Number=Sing _ _ _ _ 24 increase increase NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 E3 E3 NUM CD NumType=Card _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5127 # text = E3 transcripts are present in the myeloid, B-lymphoid, and erythroid lineages, absent in nonhematopoietic cells, and encode a highly hydrophobic, potentially phosphorylated polypeptide of unknown function with significant homology to a putative protein expressed in myeloid cells. 1 E3 E3 NUM CD NumType=Card _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 myeloid myeloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 absent absent VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 encode encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 highly highly ADV RB _ _ _ _ _ 26 hydrophobic hydrophobic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 potentially potentially ADV RB _ _ _ _ _ 29 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 33 function function NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 significant significant ADJ JJ Degree=Pos _ _ _ _ 36 homology homology NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 putative putative ADJ JJ Degree=Pos _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5128 # text = The murine E3 promoter harbors a single bipartite retinoic acid response element which in transient transfection assays conferred RA sensitivity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 E3 E3 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 harbors harbor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 single single ADJ JJ Degree=Pos _ _ _ _ 8 bipartite bipartite NOUN NN Number=Sing _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 transfection transfection NOUN NN Number=Sing _ _ _ _ 17 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 conferred confer ADJ JJ Degree=Pos _ _ _ _ 19 RA Ra NOUN NN Number=Sing _ _ _ _ 20 sensitivity sensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5129 # text = These results indicate that E3 is a hematopoietic-specific gene that is an immediate target for the activated RAR alpha during myelopoiesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 E3 E3 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 16 target target NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 RAR Rar NOUN NN Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 myelopoiesis. myelopoiesis. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5130 # text = Document 003001384 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001384 003001384 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5131 # text = Signaling through the lymphotoxin-beta receptor stimulates HIV-1 replication alone and in cooperation with soluble or membrane-bound TNF-alpha. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 alone alone ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 soluble soluble NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 -bound -bound ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5132 # text = The level of ongoing HIV-1 replication within an individual is critical to HIV-1 pathogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 individual individual NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5133 # text = Among host immune factors, the cytokine TNF-alpha has previously been shown to increase HIV-1 replication in various monocyte and T cell model systems. 1 Among among ADV RB Degree=Pos _ _ _ _ 2 host host ADV RBS _ _ _ _ _ 3 immune immune ADJ JJ Degree=Pos _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 previously previously ADV RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 increase increase VERB VB VerbForm=Inf _ _ _ _ 17 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 replication replication NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell VERB VB VerbForm=Inf _ _ _ _ 27 model model NOUN NN Number=Sing _ _ _ _ 28 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5134 # text = Here, we demonstrate that signaling through the TNF receptor family member, the lymphotoxin-beta (LT-beta) receptor (LT-betaR), also regulates HIV-1 replication. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 lymphotoxin- lymphotoxin- SYM NFP _ _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 betaR betaR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5135 # text = Furthermore, HIV-1 replication is cooperatively stimulated when the distinct LT-betaR and TNF receptor systems are simultaneously engaged by their specific ligands. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cooperatively cooperatively ADV RB _ _ _ _ _ 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 betaR betaR PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 TNF TNF SCONJ IN _ _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 systems system NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 simultaneously simultaneously ADV RB _ _ _ _ _ 22 engaged engage VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5136 # text = Moreover, in a physiological coculture cellular assay system, we show that membrane-bound TNF-alpha and LT-alpha1beta2 act virtually identically to their soluble forms in the regulation of HIV-1 replication. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 coculture coculture NOUN NN Number=Sing _ _ _ _ 7 cellular celular ADJ JJ Degree=Pos _ _ _ _ 8 assay assay NOUN NN Number=Sing _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 LT-alpha1 LT-alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 beta2 beta2 NUM CD NumType=Card _ _ _ _ 23 act act NOUN NN Number=Sing _ _ _ _ 24 virtually virtually ADV RB _ _ _ _ _ 25 identically identically ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 29 forms form NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5137 # text = Thus, cosignaling via the LT-beta and TNF-alpha receptors is probably involved in the modulation of HIV-1 replication and the subsequent determination of HIV-1 viral burden in monocytes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cosignaling cosignal VERB VBG VerbForm=Ger _ _ _ _ 4 via via ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 LT- Lt- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 probably probably ADV RB _ _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 replication replication NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 27 determination determination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 burden burden NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5138 # text = Intriguingly, surface expression of LT-alpha1beta2 is up-regulated on a T cell line acutely infected with HIV-1, suggesting a positive feedback loop between HIV-1 infection, LT-alpha1beta2 expression, and HIV-1 replication. 1 Intriguingly Intriguingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 surface surface VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 LT- Lt- SYM SYM _ _ _ _ SpaceAfter=No 7 alpha1 alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta2 beta2 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 up up ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 acutely acutely ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 positive positive ADJ JJ Degree=Pos _ _ _ _ 28 feedback feedback NOUN NN Number=Sing _ _ _ _ 29 loop loop NOUN NN Number=Sing _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 LT- LT- SYM NFP _ _ _ _ SpaceAfter=No 37 alpha1 alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta2 beta2 NUM CD NumType=Card _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5139 # text = Given the critical role that LT-alpha1beta2 plays in lymphoid architecture, we speculate that LT-alpha1beta2 may be involved in HIV-associated abnormalities of the lymphoid organs. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 critical critical ADJ JJ Degree=Pos _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 LT-alpha1 LT-alpha1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 beta2 beta2 PART TO Abbr=Yes _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 architecture architecture NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 LT-alpha1 LT-alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta2 beta2 NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 28 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5140 # text = Document 003001385 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001385 003001385 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5141 # text = Calcium/calmodulin-dependent protein kinase II downregulates both calcineurin and protein kinase C-mediated pathways for cytokine gene transcription in human T cells. 1 Calcium/calmodulin Calcium/calmodulin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 downregulates downregulate NOUN NNS Number=Plur _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C- C- PUNCT : _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5142 # text = Engagement of the T cell receptor for antigen activates phospholipase C resulting in an increase in intracellular free calcium concentration ([Ca2+]i) and activation of protein kinase C (PKC). 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 activates activate NOUN NNS Number=Plur _ _ _ _ 10 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 11 C class PROPN NNP Number=Sing _ _ _ _ 12 resulting result VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 free free ADJ JJ Degree=Pos _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 concentration concentration NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ SpaceAfter=No 25 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5143 # text = Increased [Ca2+]i activates Ca2+/calmodulin-dependent kinases including the multifunctional Ca2+/calmodulin-dependent protein kinase II (CaM-K II), as well as calcineurin, a type 2B protein phosphatase. 1 Increased increase PROPN NNP Number=Sing _ _ _ _ 2 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ SpaceAfter=No 5 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 Ca2+/calmodulin Ca2+/calmodulin ADP IN _ _ _ _ SpaceAfter=No 9 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 multifunctional multifunctional ADJ JJ Degree=Pos _ _ _ _ 14 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CaM Cam NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 K k NUM CD NumType=Card _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 calcineurin calcineurin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 type type NOUN NN Number=Sing _ _ _ _ 34 2B 2b NOUN NN Number=Sing _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5144 # text = Recent studies have identified calcineurin as a key enzyme for interleukin (IL)-2 and IL-4 promoter activation. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 key key ADJ JJ Degree=Pos _ _ _ _ 9 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5145 # text = However, the role of CaM-K II remains unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 K K PROPN NNP Number=Sing _ _ _ _ 9 II II PROPN NNP Number=Sing _ _ _ _ 10 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5146 # text = We have used mutants of these kinases and phosphatases (gamma B*CaM-K and delta CaM-AI, respectively) to explore their relative role in cytokine gene transcription and their interactions with PKC-dependent signaling systems. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 * * PUNCT NFP _ _ _ _ SpaceAfter=No 14 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 K K PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 delta delta PROPN NNP Number=Sing _ _ _ _ 19 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 explore explore VERB VB VerbForm=Inf _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 relative relative ADJ JJ Degree=Pos _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 interactions interaction NOUN NNS Number=Plur _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 signaling signaling NOUN NN Number=Sing _ _ _ _ 42 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5147 # text = gamma B*CaM-K and delta CaM-AI, known to exhibit constitutive Ca(2+)-independent activity, were cotransfected (alone or in combination) in Jurkat T cells with a plasmid containing the intact IL-2 promoter driving the expression of the chloramphenicol acetyltransferase reporter gene. 1 gamma gamma NOUN NN Number=Sing _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 * * PUNCT NFP _ _ _ _ SpaceAfter=No 4 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 K K PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 16 constitutive constitutive NOUN NN Number=Sing _ _ _ _ 17 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 +) +) SYM NFP _ _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 alone alone ADJ JJ Degree=Pos _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 40 containing contain VERB VBG VerbForm=Ger _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 intact intact NOUN NN Number=Sing _ _ _ _ 43 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ _ 47 driving drive VERB VBG VerbForm=Ger _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 53 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 54 reporter reporter NOUN NN Number=Sing _ _ _ _ 55 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 5148 # text = Cotransfection of gamma B*CaM-K with the IL-2 promoter construct downregulated its transcription in response to stimulation with ionomycin and phorbol myristate acetate (PMA). 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 * * PUNCT NFP _ _ _ _ SpaceAfter=No 6 CaM CaM NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 K K NUM CD NumType=Card _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 construct construct NOUN NN Number=Sing _ _ _ _ 16 downregulated downregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 27 myristate myristate NOUN NN Number=Sing _ _ _ _ 28 acetate acetate NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5149 # text = The inhibitory effect of CaM-K II on IL-2 promoter was associated with decreased transcription of its AP-1 and NF-AT transactivating pathways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 K K NUM CD NumType=Card _ _ _ _ 8 II II NUM CD NumType=Card _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT at SCONJ IN _ _ _ _ _ 28 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5150 # text = Under the same conditions, delta CaM-AI superinduced IL-2 promoter activity (approximately twofold increase). 1 Under under ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 delta delta PROPN NNP Number=Sing _ _ _ _ 7 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AI be PROPN NNP Number=Sing _ _ _ _ 10 superinduced superinduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 approximately approximately ADV RB _ _ _ _ _ 18 twofold twofold ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5151 # text = When both mutants were used in combination, gamma B*CaM-K inhibited the induction of the IL-2 promoter by delta CaM-AI. 1 When when ADV WRB PronType=Int _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 * * PUNCT NFP _ _ _ _ SpaceAfter=No 12 CaM Cam NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 K K NUM CD NumType=Card _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 delta delta PROPN NNP Number=Sing _ _ _ _ 26 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5152 # text = Similar results were obtained when a construct containing the IL-4 promoter also was used. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 construct construct NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5153 # text = gamma B*CaM-K also downregulated the activation of AP-1 in response to transfection with a constitutively active mutant of PKC or stimulation with PMA. 1 gamma gamma NOUN NN Number=Sing _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 * * PUNCT NFP _ _ _ _ SpaceAfter=No 4 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 K K PROPN NNP Number=Sing _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 downregulated downregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 transfection transfection VERB VB VerbForm=Inf _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 constitutively constitutively ADV RB _ _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PKC Pkc NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5154 # text = These results suggest that CaM-K II may exert negative influences on cytokine gene transcription in human T cells, and provide preliminary evidence for negative cross-talk with the calcineurin- and PKC- dependent signaling systems. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 K K NUM CD NumType=Card _ _ _ _ 8 II II NUM CD NumType=Card _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 exert exert VERB VB VerbForm=Inf _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 influences influence NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 provide provide VERB VB VerbForm=Inf _ _ _ _ 24 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 25 evidence evidence NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 cross-talk cross-talk NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ _ 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 signaling signaling NOUN NN Number=Sing _ _ _ _ 38 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5155 # text = Document 003001386 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001386 003001386 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5156 # text = HIV does not replicate in naive CD4 T cells stimulated with CD3/CD28. 1 HIV HIV NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 naive naive ADJ JJ Degree=Pos _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CD3/CD28 CD3/CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5157 # text = In this report, we demonstrate that the T cell tropic strain of HIV, LAI, does not replicate in naive CD4 T cells stimulated by cross-linking CD3 and CD28. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 tropic tropic ADJ JJ Degree=Pos _ _ _ _ 12 strain strain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 LAI LAI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 naive naive ADJ JJ Degree=Pos _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by SCONJ IN _ _ _ _ _ 28 cross-linking cross-link VERB VBG VerbForm=Ger _ _ _ _ 29 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CD28 CD28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5158 # text = In contrast, LAI replicates well in memory CD4 T cells stimulated in the same way. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LAI LAI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 replicates replicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 memory memory NOUN NN Number=Sing _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 way way NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5159 # text = Unlike this physiologically relevant stimulation, PHA stimulates productive LAI replication in both naive and memory T cells. 1 Unlike unlike ADP IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 physiologically physiologically ADV RB _ _ _ _ _ 4 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 PHA PHA PROPN NNP Number=Sing _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 productive productive ADJ JJ Degree=Pos _ _ _ _ 10 LAI Lai NOUN NN Number=Sing _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 naive naive ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 memory memory ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5160 # text = These studies were conducted with highly purified (FACS-isolated) subsets of CD4 T cells identified by expression of both CD45RA and CD62L. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 FACS Fac NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 subsets subset NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 CD62L CD62L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5161 # text = Remixing of purified T cells showed that naive T cells do not suppress LAI replication in memory T cells and that memory T cells do not restore LAI expression in naive T cells. 1 Remixing Remixing VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 14 LAI Lai ADJ JJ Degree=Pos _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 memory memory NOUN NN Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 memory memory NOUN NN Number=Sing _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 restore restore VERB VB VerbForm=Inf _ _ _ _ 28 LAI Lai PROPN NNP Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 naive naive ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5162 # text = The suppression of productive LAI replication in naive T cells is not due to differential expression of viral coreceptors, nor is it due to inhibition of activation of the important HIV transcription factors, nuclear factor-kappaB and activator protein-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 productive productive ADJ JJ Degree=Pos _ _ _ _ 5 LAI LAI PROPN NNP Number=Sing _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 due due ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 differential differential ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 coreceptors coreceptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nor nor CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 due due ADP IN _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 HIV Hiv NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappaB kappab NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 activator activator NOUN NN Number=Sing _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5163 # text = The inherent resistance of naive T cells to productive HIV infection, coupled with their proliferative advantage as demonstrated here, provides a sound basis for proposed clinical therapies using ex vivo expansion and reinfusion of CD4 T cells from HIV-infected adults. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inherent inherent ADJ JJ Degree=Pos _ _ _ _ 3 resistance resistance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 naive naive ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 productive productive VERB VB VerbForm=Inf _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 17 advantage advantage NOUN NN Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 sound sound NOUN NN Number=Sing _ _ _ _ 25 basis basis NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 29 therapies therapy NOUN NNS Number=Plur _ _ _ _ 30 using use VERB VBG VerbForm=Ger _ _ _ _ 31 ex ex ADJ JJ Degree=Pos _ _ _ _ 32 vivo vivo NOUN NN Number=Sing _ _ _ _ 33 expansion expansion NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 reinfusion reinfusion NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5164 # text = Document 003001387 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001387 003001387 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5165 # text = Activation of the signal transducer and transcription (STAT) signaling pathway in a primary T cell response. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducer transducer NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5166 # text = Critical role for IL-6. 1 Critical critical ADJ JJ Degree=Pos _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5167 # text = The T cell activation is initiated by interaction of specific Ags with TCR, followed by activation of intracellular biochemical events leading to activation of several genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 Ags ag NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 TCR Tcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5168 # text = The activation of signal transducer and activator of transcription (STAT) proteins in a primary TCR-mediated activation of T cells have been explored. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducer transducer NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activator activator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5169 # text = In purified human peripheral blood T cells, nuclear 1 In in ADP IN _ _ _ _ _ 2 purified purified ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 5170 # text = STAT proteins were activated approximately 3 h after activation by cross-linked anti-CD3 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 approximately approximately ADV RB _ _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 h h NOUN NN Number=Sing _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 anti-CD3 anti-CD3 X ADD _ _ _ _ _ # sent_id = 5171 # text = Abs. 1 Abs Ab NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 5172 # text = These STAT proteins were detected by using the IFN-gamma-activated sequence (GAS) and related oligonucleotides as probes in electrophoretic mobility shift assay. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 probes probe NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5173 # text = Analysis of the nuclear extracts with anti-STAT Abs indicated that they contained STAT-3 and additional proteins crossreactive with the STAT family. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 anti-STAT anti-stat ADJ JJ Degree=Pos _ _ _ _ 8 Abs Abs NOUN NNS Number=Plur _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 additional additional ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 crossreactive crossreactive ADJ JJ Degree=Pos _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5174 # text = The induction of STAT activity was inhibited completely by pretreatment with either cycloheximide or cyclosporin A, thus indicating that the induction was due to a secondary factor produced by the activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 16 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 thus thus ADV RB _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 due due ADP IN _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5175 # text = As neutralizing anti-IL-6 1 As as SCONJ IN _ _ _ _ _ 2 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 3 anti-IL anti-IL ADV RB _ _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 5176 # text = Abs effectively down-regulated the early induction of STAT proteins and as exogenously added IL-6 rapidly activated DNA binding similar to TCR-mediated bindings, it can be concluded that IL-6 is the factor responsible for the activation of STAT proteins in a primary T cell response. 1 Abs Ab ADV RB _ _ _ _ _ 2 effectively effectively ADV RB _ _ _ _ _ 3 down down ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 exogenously exogenously ADV RB _ _ _ _ _ 15 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 rapidly rapidly ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 bindings bindings NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 6 6 NUM CD NumType=Card _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 47 proteins protein NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 primary primary ADJ JJ Degree=Pos _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cell cell NOUN NN Number=Sing _ _ _ _ 53 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5177 # text = Document 003001388 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001388 003001388 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5178 # text = Characterization of the human platelet/endothelial cell adhesion molecule-1 promoter: identification of a GATA-2 binding element required for optimal transcriptional activity. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 identification identification NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5179 # text = Platelet/endothelial cell adhesion molecule-1 (PECAM-1) is a 130-kD member of the Ig gene superfamily that is expressed on platelets, endothelial cells, and certain leukocyte subsets. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 130 130 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kD kd NOUN NN Number=Sing _ _ _ _ 19 member member NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Ig ig PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 certain certain ADJ JJ Degree=Pos _ _ _ _ 36 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 37 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5180 # text = To examine the factors controlling vascular-specific expression of PECAM-1, we cloned the 5'-flanking region of the PECAM-1 gene and analyzed its transcriptional activity. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 controlling control VERB VBG VerbForm=Ger _ _ _ _ 6 vascular vascular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5181 # text = 5'-Rapid amplification of cDNA ends (5'-RACE) analysis showed that transcription initiation occurred at several closely spaced nearby sites originating approximately 204 bp upstream from the translation start site. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 Rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 amplification amplification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 8 ends end NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 '- '- PUNCT . _ _ _ _ SpaceAfter=No 12 RACE race NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 analysis analysis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 initiation initiation NOUN NN Number=Sing _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 closely closely ADV RB _ _ _ _ _ 23 spaced space VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 nearby nearby ADJ JJ Degree=Pos _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 originating originat VERB VBG VerbForm=Ger _ _ _ _ 27 approximately approximately ADV RB _ _ _ _ _ 28 204 204 NUM CD NumType=Card _ _ _ _ 29 bp bp NOUN NN Number=Sing _ _ _ _ 30 upstream upstream NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 translation translation NOUN NN Number=Sing _ _ _ _ 34 start start NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5182 # text = Analysis of the sequence immediately upstream from the transcription initiation site (TIS) showed no canonical TATA or CAAT elements, however an initiator element commonly found in TATA-less promoters encompassed the TIS. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 immediately immediately ADV RB _ _ _ _ _ 6 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 initiation initiation NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TIS TIS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 18 TATA TATa NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 CAAT Caat NOUN NN Number=Sing _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 initiator initiator NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 commonly commonly ADV RB _ _ _ _ _ 28 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 TATA TATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 less less ADJ JJR Degree=Cmp _ _ _ _ 33 promoters promoter NOUN NNS Number=Plur _ _ _ _ 34 encompassed encompass VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 TIS tis NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5183 # text = 5'-serially truncated PECAM-1 promoter segments cloned in front of a luciferase reporter drove transcription in both a lineage- and orientation-specific manner. 1 5 5 X LS _ _ _ _ SpaceAfter=No 2 '- '- PUNCT . _ _ _ _ SpaceAfter=No 3 serially serially ADV RB _ _ _ _ _ 4 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 segments segment NOUN NNS Number=Plur _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 front front NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 drove drive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5184 # text = Putative cis-acting control elements present within a 300-bp core promoter included two ets sites, an Sp1 site, tandem E-box domains, two GATA-associated sites (CACCC), an AP-2 binding site, and a GATA element at -24. 1 Putative Putative ADJ JJ Degree=Pos _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 4 control control NOUN NN Number=Sing _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 core core NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 ets et NOUN NNS Number=Plur _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 tandem tandem NOUN NN Number=Sing _ _ _ _ 24 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 box box NOUN NN Number=Sing _ _ _ _ 26 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 CACCC CACCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 binding binding NOUN NN Number=Sing _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 GATA GATa PROPN NNP Number=Sing _ _ _ _ 47 element element NOUN NN Number=Sing _ _ _ _ 48 at at ADP IN _ _ _ _ _ 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5185 # text = Mutational analysis showed that optimal transcriptional activity required the GATA sequence at position -24, and gel-shift assays further showed that the GATA-2 transcription factor, but not GATA-1, bound to this region of the PECAM-1 promoter. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GATA GATA PROPN NNP Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 shift shift NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 further further ADV RB _ _ _ _ _ 23 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 bound bound ADJ JJ Degree=Pos _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 region region NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5186 # text = Understanding the cis- and transacting factors that regulate the tissue-specific expression of PECAM-1 should increase our understanding of the mechanisms by which vascular-specific gene expression is achieved. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transacting transact VERB VBG VerbForm=Ger _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 should should AUX MD VerbForm=Fin _ _ _ _ 20 increase increase VERB VB VerbForm=Inf _ _ _ _ 21 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 22 understanding understanding NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 vascular vascular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5187 # text = Document 003001389 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001389 003001389 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5188 # text = Ectopic expression of a conditional GATA-2/estrogen receptor chimera arrests erythroid differentiation in a hormone-dependent manner. 1 Ectopic Ectopic ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 6 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 chimera chimera NOUN NN Number=Sing _ _ _ _ 13 arrests arrest NOUN NNS Number=Plur _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5189 # text = The GATA factors are a family of transcriptional regulatory proteins in eukaryotes that share extensive homology in their DNA-binding domains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 eukaryotes eukaryote NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 16 homology homology NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5190 # text = One enigmatic aspect of GATA factor expression is that several GATA proteins, which ostensibly share the same DNA-binding site specificity, are coexpressed in erythroid cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 enigmatic enigmatic ADJ JJ Degree=Pos _ _ _ _ 3 aspect aspect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 GATA GATa NOUN NN Number=Sing _ _ _ _ 12 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 ostensibly ostensibly ADV RB _ _ _ _ _ 16 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 same same ADJ JJ Degree=Pos _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5191 # text = To elucidate the roles of individual GATA factors in erythropoiesis, conditional alleles of GATA-1, GATA-2, and GATA-3 were prepared by fusing each of the factors to the hormone-binding domain of the human estrogen receptor (ER). 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 roles role NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 erythropoiesis erythropoiesis ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 13 alleles allele NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 fusing fuse VERB VBG VerbForm=Ger _ _ _ _ 31 each each DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 domain domain NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 human human ADJ JJ Degree=Pos _ _ _ _ 44 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 45 receptor receptor NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5192 # text = These GATA/ER chimeric factors were shown to be hormone-inducible trans-activating proteins in transient transfection assays. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 ER er NOUN NN Number=Sing _ _ _ _ 5 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 hormone hormone VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 activating activat VERB VBG VerbForm=Ger _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 transient transient ADJ JJ Degree=Pos _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5193 # text = When stably introduced into primary erythroblasts or conditionally transformed erythroid progenitors cells, exogenous GATA-2/ER promoted proliferation and inhibited terminal differentiation in an estrogen-dependent manner. 1 When when ADV WRB PronType=Int _ _ _ _ 2 stably stably ADV RB Degree=Pos _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 into into ADP IN _ _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 conditionally conditionally ADV RB _ _ _ _ _ 9 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 exogenous exogenous CCONJ CC _ _ _ _ _ 15 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2/ER 2/er PROPN NNP Number=Sing _ _ _ _ 18 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 estrogen estrogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5194 # text = These phenotypic effects are specifically attributable to the action of ectopically expressed GATA-2/ER because erythroblasts expressing exogenous GATA-2 are constitutively arrested in differentiation and because erythroid progenitors expressing either Gal/ER or GATA-3/ER do not display a hormone-responsive block in differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 ectopically ectopically ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2/ER 2/er PROPN NNP Number=Sing _ _ _ _ 16 because because SCONJ IN _ _ _ _ _ 17 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 18 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 19 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 arrested arrest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 because because SCONJ IN _ _ _ _ _ 30 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 31 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 32 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 33 either either DET DT _ _ _ _ _ 34 Gal/ Gal/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ER er NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 -3/ER -3/er PROPN NNP Number=Sing _ _ _ _ 39 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 not not PART RB _ _ _ _ _ 41 display display VERB VB VerbForm=Inf _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 46 block block NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5195 # text = Thus, the GATA-2 transcription factor appears to play a role in regulating the self-renewal capacity of early erythroid progenitor cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 renewal renewal ADJ JJ Degree=Pos _ _ _ _ 20 capacity capacity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 early early ADJ JJ Degree=Pos _ _ _ _ 23 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 24 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5196 # text = Document 003001390 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001390 003001390 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5197 # text = Bcl-2-mediated drug resistance: inhibition of apoptosis by blocking nuclear factor of activated T lymphocytes (NFAT)-induced Fas ligand transcription. 1 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 drug drug NOUN NN Number=Sing _ _ _ _ 6 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Fas Fa NOUN NNS Number=Plur _ _ _ _ 25 ligand ligand NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5198 # text = Bcl-2 inhibits apoptosis induced by a variety of stimuli, including chemotherapy drugs and glucocorticoids. 1 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 variety variety NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 15 drugs drug NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5199 # text = It is generally accepted that Bcl-2 exerts its antiapoptotic effects mainly by dimerizing with proapoptotic members of the Bcl-2 family such as Bax and Bad. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 generally generally ADV RB _ _ _ _ _ 4 accepted accept VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 exerts exert NOUN NNS Number=Plur _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 mainly mainly ADV RB _ _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 dimerizing dimerize VERB VBG VerbForm=Ger _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 Bax Bax PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Bad Bad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5200 # text = However, the mechanism of the antiapoptotic effects is unclear. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5201 # text = Paclitaxel and other drugs that disturb microtubule dynamics kill cells in a Fas/Fas ligand (FasL)-dependent manner; antibody to FasL inhibits paclitaxel-induced apoptosis. 1 Paclitaxel Paclitaxel PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 drugs drug NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 disturb disturb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 8 dynamics dynamics NOUN NNS Number=Plur _ _ _ _ 9 kill kill VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Fas Fas PROPN NNP Number=Sing _ _ _ _ 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FasL FasL INTJ UH _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 antibody antibody PRON NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 27 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 28 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5202 # text = We have found that Bcl-2 overexpression leads to the prevention of chemotherapy (paclitaxel)-induced expression of FasL and blocks paclitaxel-induced apoptosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 9 leads lead NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 prevention prevention NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 FasL Fasl NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 blocks block NOUN NNS Number=Plur _ _ _ _ 25 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5203 # text = The mechanism of this effect is that Bcl-2 prevents the nuclear translocation of NFAT (nuclear factor of activated T lymphocytes, a transcription factor activated by microtubule damage) by binding and sequestering calcineurin, a calcium-dependent phosphatase that must dephosphorylate NFAT to move to the nucleus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 prevents prevent NOUN NNS Number=Plur _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 31 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 by by SCONJ IN _ _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 sequestering sequester VERB VBG VerbForm=Ger _ _ _ _ 37 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 43 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 must must AUX MD VerbForm=Fin _ _ _ _ 46 dephosphorylate dephosphorylate VERB VB VerbForm=Inf _ _ _ _ 47 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 48 to to PART TO _ _ _ _ _ 49 move move VERB VB VerbForm=Inf _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5204 # text = Without NFAT nuclear translocation, the FasL gene is not transcribed. 1 Without without ADP IN _ _ _ _ _ 2 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5205 # text = Thus, it appears that paclitaxel and other drugs that disturb microtubule function kill cells at least in part through the induction of FasL. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 drugs drug NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 disturb disturb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 kill kill NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 at at ADV RB _ _ _ _ _ 17 least least ADV RBS Degree=Sup _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 part part NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 FasL FasL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5206 # text = Furthermore, Bcl-2 antagonizes drug-induced apoptosis by inhibiting calcineurin activation, blocking NFAT nuclear translocation, and preventing FasL expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 antagonizes antagonize NOUN NNS Number=Plur _ _ _ _ 7 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 13 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 blocking block VERB VBG VerbForm=Ger _ _ _ _ 17 NFAT Nfat PRON WP PronType=Int _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 23 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5207 # text = The effects of Bcl-2 can be overcome, at least partially, through phosphorylation of Bcl-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 overcome overcome VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 at at ADV RB _ _ _ _ _ 12 least least ADV RBS Degree=Sup _ _ _ _ 13 partially partially ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5208 # text = Phosphorylated Bcl-2 cannot bind calcineurin, and NFAT activation, FasL expression, and apoptosis can occur after Bcl-2 phosphorylation. 1 Phosphorylated Phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 6 not not PART RB _ _ _ _ _ 7 bind bind VERB VB VerbForm=Inf _ _ _ _ 8 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 occur occur VERB VB VerbForm=Inf _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5209 # text = Document 003001391 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001391 003001391 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5210 # text = NF-kappaB activation is a critical regulator of human granulocyte apoptosis in vitro. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 critical critical ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 12 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5211 # text = During beneficial inflammation, potentially tissue-damaging granulocytes undergo apoptosis before being cleared by phagocytes in a non-phlogistic manner. 1 During during ADP IN _ _ _ _ _ 2 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 3 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 potentially potentially ADV RB _ _ _ _ _ 6 tissue tissue VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 7 -damaging -damage VERB VBG VerbForm=Ger _ _ _ _ 8 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 9 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 before before SCONJ IN _ _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 cleared cleare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 non-phlogistic non-phlogistic ADJ JJ Degree=Pos _ _ _ _ 19 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5212 # text = Here we show that the rate of constitutive apoptosis in human neutrophils and eosinophils is greatly accelerated in both a rapid and concentration-dependent manner by the fungal metabolite gliotoxin, but not by its inactive analog methylthiogliotoxin. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 greatly greatly ADV RB _ _ _ _ _ 17 accelerated accelerate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 rapid rapid NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 fungal fungal ADJ JJ Degree=Pos _ _ _ _ 30 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 31 gliotoxin gliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 37 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 38 analog analog NOUN NN Number=Sing _ _ _ _ 39 methylthiogliotoxin methylthiogliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5213 # text = This induction of apoptosis was abolished by the caspase inhibitor zVAD-fmk, correlated with the inhibition of nuclear factor-kappa B (NF-kappaB), and was mimicked by a cell permeable inhibitory peptide of NF-kappaB, SN-50; other NF-kappaB inhibitors, curcumin and pyrrolidine dithiocarbamate; and the proteasome inhibitor, MG-132. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 caspase caspase NOUN NN Number=Sing _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 zVAD zvad NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fmk fmk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 33 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 38 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 39 peptide peptide NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 SN SN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ; ; PUNCT , _ _ _ _ _ 49 other other ADJ JJ Degree=Pos _ _ _ _ 50 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 53 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 curcumin curcumin NOUN NNS Number=Plur _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 58 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 ; ; PUNCT , _ _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 63 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 MG MG NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 132 132 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 5214 # text = Gliotoxin also augmented dramatically the early (2-6 1 Gliotoxin Gliotoxin PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 dramatically dramatically ADV RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 5215 # text = h) pro-apoptotic effects of tumor necrosis factor-alpha (TNF-alpha) in neutrophils and unmasked the ability of TNF-alpha to induce eosinophil apoptosis. 1 h h INTJ UH _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 pro-apoptotic pro-apoptotic ADJ JJ Degree=Pos _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 unmasked unmask VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 eosinophil eosinophil ADP IN _ _ _ _ _ 29 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5216 # text = In neutrophils, TNF-alpha caused a gliotoxin-inhibitable activation of an inducible form of NF-kappaB, a response that may underlie the ability of TNF-alpha to delay apoptosis at later times (12-24 h) and limit its early killing effect. 1 In in ADP IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha PROPN NNP Number=Sing _ _ _ _ 7 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 gliotoxin gliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ability ability NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 delay delay VERB VB VerbForm=Inf _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 later later ADJ JJR Degree=Cmp _ _ _ _ 38 times time NOUN NNS Number=Plur _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 24 24 NUM CD NumType=Card _ _ _ _ 43 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 limit limit VERB VB VerbForm=Inf _ _ _ _ 47 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 48 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 early early ADV RB Degree=Pos _ _ _ _ 50 killing kill VERB VBG VerbForm=Ger _ _ _ _ 51 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 5217 # text = Furthermore, cycloheximide displayed a similar capacity to enhance TNF-alpha induced neutrophil apoptosis even at time points when cycloheximide alone had no pro-apoptotic effect, suggesting that NF-kappaB may regulate the production of protein(s) which protect neutrophils from the cytotoxic effects of TNF-alpha. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 4 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 15 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 even even ADV RB _ _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 time time NOUN NN Number=Sing _ _ _ _ 19 points point NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 cycloheximide cycloheximide ADJ JJ Degree=Pos _ _ _ _ 22 alone alone ADV RB _ _ _ _ _ 23 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 pro-apoptotic pro-apoptotic ADJ JJ Degree=Pos _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 s s X AFX _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 protect protect VERB VB VerbForm=Inf _ _ _ _ 44 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 45 from from ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 48 effects effect NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5218 # text = These data shed light on the biochemical and molecular mechanisms regulating human granulocyte apoptosis and, in particular, indicate that the transcription factor NF-kappaB plays a crucial role in regulating the physiological cell death pathway in granulocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 shed sh VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 light light NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 indicate indicate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in SCONJ IN _ _ _ _ _ 33 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 death death NOUN NN Number=Sing _ _ _ _ 38 pathway pathway NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5219 # text = Document 003001392 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001392 003001392 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5220 # text = Downstream activation of a TATA-less promoter by Oct-2, Bob1, and NF-kappaB directs expression of the homing receptor BLR1 to mature B cells. 1 Downstream downstream ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 less less ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Bob1 bob1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 homing home VERB VBG VerbForm=Ger _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 BLR1 BLR1 NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 mature mature ADJ JJ Degree=Pos _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5221 # text = The chemokine receptor, BLR1, is a major regulator of the microenvironmental homing of B cells in lymphoid organs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 microenvironmental microenvironmental ADJ JJ Degree=Pos _ _ _ _ 14 homing homing NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5222 # text = In vitro studies identify three essential elements of the TATA-less blr1 core promoter that confer cell type- and differentiation-specific expression in the B cells of both humans and mice, a functional promoter region (-36 with respect to the transcription start site), a NF-kappaB motif (+44), and a noncanonical octamer motif (+157). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 three three NUM CD NumType=Card _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TATA TATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 less less ADV RBR Degree=Cmp _ _ _ _ 13 blr1 blr1 NUM CD NumType=Card _ _ _ _ 14 core core NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 confer confer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 humans humans NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 36 36 NUM CD NumType=Card _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 respect respect NOUN NN Number=Sing _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ _ 48 start start NOUN NN Number=Sing _ _ _ _ 49 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 56 motif motif NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 +44 +44 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 63 noncanonical noncanonical ADJ JJ Degree=Pos _ _ _ _ 64 octamer octamer NOUN NN Number=Sing _ _ _ _ 65 motif motif NOUN NN Number=Sing _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 +157 +157 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 5223 # text = The importance of these sites was confirmed by in vivo studies in gene-targeted mice deficient of either Oct-2, Bob1, or both NF-kappaB subunits p50 and p52. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 studies study NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mice mouse NOUN NNS Number=Plur _ _ _ _ 17 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 either either CCONJ CC _ _ _ _ _ 20 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Bob1 bob1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 both both DET DT _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 subunits subunit NOUN NNS Number=Plur _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5224 # text = In all of these animals, the expression of BLR1 was reduced or absent. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5225 # text = In mice deficient only of p52/NF-kappaB, BLR1 expression was unaffected. 1 In in ADP IN _ _ _ _ _ 2 mice mice NOUN NN Number=Sing _ _ _ _ 3 deficient deficient NOUN NN Number=Sing _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p52/ p52ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 BLR1 BLR1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5226 # text = Thus our data demonstrate that BLR1 is a target gene for Oct-2, Bob1, and members of the NF-kappaB/Rel family and provides a link to the impaired B cell functions in mice deficient for these factors. 1 Thus thus ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 target target NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Bob1 bob1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Rel Rel PROPN NNP Number=Sing _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 link link NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 functions function NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mice mouse NOUN NNS Number=Plur _ _ _ _ 39 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5227 # text = Document 003001393 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001393 003001393 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5228 # text = Defective transcription of the IL-2 gene is associated with impaired expression of c-Fos, FosB, and JunB in anergic T helper 1 cells. 1 Defective defective ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 JunB JunB PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 anergic anergic PROPN NNP Number=Sing _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 helper helper NOUN NN Number=Sing _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5229 # text = Anergic CD4+ 1 Anergic Anergic PROPN NNP Number=Sing _ _ _ _ 2 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 + + SYM NFP _ _ _ _ _ # sent_id = 5230 # text = Th cells do not produce IL-2 when challenged with Ag-pulsed accessory cells because of a transcriptional defect. 1 Th th ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 produce produce VERB VB VerbForm=Inf _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 challenged challenge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 Ag- Ag- PUNCT : _ _ _ _ SpaceAfter=No 13 pulsed pulse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 because because ADP IN _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5231 # text = In this work, we report that these anergic T cells are defective in their ability to up-regulate protein binding and transactivation at two critical IL-2 DNA enhancer elements: NF-AT (nuclear factor of activated T cells; a sequence that binds a heterotrimeric NFATp, Fos, and Jun protein complex) and Activator Protein-1 (AP-1) (that binds Fos and Jun heterodimers). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 defective defective ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 up up ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 : : PUNCT : _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT AT PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 ; ; PUNCT , _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 sequence sequence NOUN NN Number=Sing _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 heterotrimeric heterotrimeric ADJ JJ Degree=Pos _ _ _ _ 52 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 Jun Jun PROPN NNP Number=Sing _ _ _ _ 58 protein protein NOUN NN Number=Sing _ _ _ _ 59 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 Activator Activator PROPN NNP Number=Sing _ _ _ _ 63 Protein protein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 1 1 NUM CD NumType=Card _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ _ 71 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 72 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 73 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 74 Fos Fos PROPN NNP Number=Sing _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 Jun Jun PROPN NNP Number=Sing _ _ _ _ 77 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 78 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 5232 # text = Western blot analysis of nuclear extracts showed that the impaired DNA-protein interactions in anergic T cells were associated with poor expression of the inducible AP-1 family members c-Fos, FosB, and JunB. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 extracts extract NOUN NNS Number=Plur _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 interactions interaction NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 poor poor ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 c- c- PUNCT , _ _ _ _ SpaceAfter=No 33 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5233 # text = However, the reduced expression of these proteins was not the result of a global TCR/CD3-signaling defect because CD3 cross-linking induced an equivalent increase in intracellular-free calcium ions, as well as NFATp dephosphorylation, translocation to the nucleus, and DNA binding in both normal and anergic T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 result result NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 global global ADJ JJ Degree=Pos _ _ _ _ 16 TCR/CD3 TCR/CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -signaling -signal NOUN NN Number=Sing _ _ _ _ 18 defect defect NOUN NN Number=Sing _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 CD3 CD3 NUM CD NumType=Card _ _ _ _ 21 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -linking -link NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 intracellular intracellular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 free free ADJ JJ Degree=Pos _ _ _ _ 31 calcium calcium NOUN NN Number=Sing _ _ _ _ 32 ions ion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 well well ADV RB Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 38 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 translocation translocation NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 DNA dna NOUN NN Number=Sing _ _ _ _ 47 binding binding VERB VBG VerbForm=Ger _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 both both CCONJ CC _ _ _ _ _ 50 normal normal ADJ JJ Degree=Pos _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 53 T t PROPN NNP Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5234 # text = Thus, defective IL-2 gene transcription appears to be due, at least in part, to a selective block in the expression of the AP-1 Fos and Jun family members in anergic T cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 defective defective ADJ JJ Degree=Pos _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 due due ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 at at ADV RB _ _ _ _ _ 15 least least ADV RBS Degree=Sup _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 selective selective ADJ JJ Degree=Pos _ _ _ _ 22 block block NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 Fos Fo NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 Jun Jun PROPN NNP Number=Sing _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ _ 35 members member NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5235 # text = Document 003001394 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001394 003001394 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5236 # text = Human T-cell leukemia virus type 1 tax protein abrogates interleukin-2 dependence in a mouse T-cell line. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 tax tax NOUN NN Number=Sing _ _ _ _ 9 protein protein ADV WRB PronType=Rel _ _ _ _ 10 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 dependence dependence NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 mouse mouse NOUN NN Number=Sing _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5237 # text = Human T-cell leukemia virus type 1 (HTLV-1) is the etiologic agent of adult T-cell leukemia. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5238 # text = Tax, the viral protein, is thought to be crucial in the development of the disease, since it transforms healthy T cells in vitro and induces tumors in transgenic animals. 1 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 since since SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 transforms transform VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 tumors tumor NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 32 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5239 # text = We examined the effect of Tax activity on the growth of the interleukin-2 (IL-2)-dependent T-cell line CTLL-2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Tax tax NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ _ 26 CTLL Ctll NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5240 # text = Stable expression of Tax in CTLL-2 transformed cell growth from being IL-2 dependent to IL-2 independent. 1 Stable stable ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 from from SCONJ IN _ _ _ _ _ 13 being be AUX VBG VerbForm=Ger _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5241 # text = Tax stimulated transcription through NF-kappaB and the cyclic AMP-responsive element-like sequence in the HTLV-1 promoter. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 11 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5242 # text = The finding of Tax mutants segregating these two pathways suggested that the NF-kappaB pathway was essential for IL-2-independent growth of CTLL-2 cells while the CRE pathway was unnecessary. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 segregating segregat VERB VBG VerbForm=Ger _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 while while SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 CRE Cre PROPN NNP Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 unnecessary unnecessary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5243 # text = However, both pathways were necessary for another transformation-related activity (colony formation in soft agar) of CTLL-2/Tax. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 another another DET DT _ _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 colony colony NOUN NN Number=Sing _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 soft soft ADJ JJ Degree=Pos _ _ _ _ 18 agar agar NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5244 # text = Our results show that Tax has at least two distinct activities on T cells, and suggest that Tax plays a crucial role in IL-2-independent 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Tax tax PROPN NNP Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ _ 20 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 independent independent ADJ JJ Degree=Pos _ _ _ _ # sent_id = 5245 # text = T-cell transformation induced by HTLV-1, in addition to its well-known IL-2-dependent cell transformation. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 transformation transformation NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 addition addition NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5246 # text = Document 003001395 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001395 003001395 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5247 # text = Soluble tumor necrosis factor receptors inhibit phorbol myristate acetate and cytokine-induced HIV-1 expression chronically infected U1 cells. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 tumor tumor NOUN NN Number=Sing _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 inhibit inhibit ADJ JJ Degree=Pos _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 U1 U1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5248 # text = Recombinant human tumor necrosis factor (TNF) binding protein-1 (r-h TBP-1) and recombinant human soluble dimeric TNF receptor (rhu TNFR:Fc) were used to determine the relative contributions of TNF to phorbol myristate acetate (PMA) and cytokine-induced human immunodeficiency virus type 1 (HIV-1) replication in chronically infected cell lines. 1 Recombinant Recombinant ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 r r NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 h h NOUN NN Number=Sing _ _ _ _ 17 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 25 dimeric dimeric ADJ JJ Degree=Pos _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 rhu rhu NOUN NN Number=Sing _ _ _ _ 30 TNFR: TNFR: NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 Fc Fc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 determine determine VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 relative relative ADJ JJ Degree=Pos _ _ _ _ 39 contributions contribution NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 TNF TNF PROPN NNP Number=Sing _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 44 myristate myristate NOUN NN Number=Sing _ _ _ _ 45 acetate acetate NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 human human ADJ JJ Degree=Pos _ _ _ _ 54 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 55 virus virus NOUN NN Number=Sing _ _ _ _ 56 type type NOUN NN Number=Sing _ _ _ _ 57 1 1 NUM CD NumType=Card _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 replication replication NOUN NN Number=Sing _ _ _ _ 64 in in ADP IN _ _ _ _ _ 65 chronically chronically ADV RB _ _ _ _ _ 66 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 67 cell cell NOUN NN Number=Sing _ _ _ _ 68 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 5249 # text = Treatment of HIV-1-infected promonocytic U1 cells with r-h-TBP-1 or rhu TNFR:Fc reduced PMA-induced HIV-1 p24 antigen production in a concentration-dependent manner, with a maximal inhibition of approximately 90%. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 9 U1 u1 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 r-h r-h NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 rhu rhu PROPN NNP Number=Sing _ _ _ _ 19 TNFR:Fc TNFR:Fc PROPN NNP Number=Sing _ _ _ _ 20 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 p24 p24 NUM CD NumType=Card _ _ _ _ 28 antigen antigen NUM CD NumType=Card _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 40 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 approximately approximately ADV RB _ _ _ _ _ 43 90% 90% SYM NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5250 # text = Maximal inhibition of p24 antigen production in T-lymphocytic ACH-2 cells was 47% with r-hTBP-1 and 42% with rhu TNFR:Fc. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p24 p24 NUM CD NumType=Card _ _ _ _ 5 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T- T- PUNCT : _ _ _ _ SpaceAfter=No 9 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 10 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 r-hTBP r-hTBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 rhu rhu NOUN NN Number=Sing _ _ _ _ 26 TNFR: TNFR: NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 Fc. Fc. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5251 # text = r-hTBP-1 and rhu TNFR:Fc also decreased p24 antigen synthesized by U1 cells in response to other stimuli, including phytohemagglutinin (PHA)-induced supernatant, granulocyte-macrophage colony-stimulating factor, interleukin-6, and TNF. 1 r-hTBP r-hTBp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 rhu rhu NOUN NN Number=Sing _ _ _ _ 6 TNFR Tnfr NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ SpaceAfter=No 8 Fc Fc PROPN NNP Number=Sing _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 p24 p24 NUM CD NumType=Card _ _ _ _ 12 antigen antigen NOUN NNS Number=Plur _ _ _ _ 13 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 U1 U1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 supernatant supernatant NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5252 # text = Addition of r-hTBP-1 to U1 cells during the last 4 h of a 24 h incubation with PMA still inhibited p24 antigen production by 15%. U1 cells stimulated with 10(-7) M PMA released approximately 1 ng/ml endogenous TBP-1 with an initial peak observed at 1 h and a second peak at 24 h after PMA stimulation. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 r-hTBP r-hTBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 U1 U1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 last last ADJ JJ Degree=Pos _ _ _ _ 12 4 4 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 24 24 NUM CD NumType=Card _ _ _ _ 17 h h NOUN NN Number=Sing _ _ _ _ 18 incubation incubation NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 still still ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 p24 p24 NUM CD NumType=Card _ _ _ _ 24 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 15% 15% SYM NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ 29 U1 U1 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 (- (- PUNCT . _ _ _ _ SpaceAfter=No 35 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 M be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ _ 39 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 approximately approximately ADV RB _ _ _ _ _ 41 1 1 NUM CD NumType=Card _ _ _ _ 42 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 ml ml ADJ JJ Degree=Pos _ _ _ _ 45 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 46 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 initial initial ADJ JJ Degree=Pos _ _ _ _ 52 peak peak NOUN NN Number=Sing _ _ _ _ 53 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 at at ADP IN _ _ _ _ _ 55 1 1 NUM CD NumType=Card _ _ _ _ 56 h h NOUN NN Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 60 peak peak NOUN NN Number=Sing _ _ _ _ 61 at at ADP IN _ _ _ _ _ 62 24 24 NUM CD NumType=Card _ _ _ _ 63 h h NOUN NN Number=Sing _ _ _ _ 64 after after ADP IN _ _ _ _ _ 65 PMA PMA PROPN NNP Number=Sing _ _ _ _ 66 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 5253 # text = r-hTBP-1 also partially reversed inhibition of U1 cellular proliferation caused by PMA. 1 r-hTBP r-hTBp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 reversed reverse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 U1 U1 NUM CD NumType=Card _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5254 # text = Both r-hTBP-1 and rhu TNFR:Fc blocked PMA induction of nuclear factor (NK)- kappa B DNA-binding activity in U1 cells in association with decreases in HIV-1 replication. 1 Both both DET DT _ _ _ _ _ 2 r-hTBP r-htbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 rhu rhu PROPN NNP Number=Sing _ _ _ _ 7 TNFR:Fc TNFR:Fc PROPN NNP Number=Sing _ _ _ _ 8 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 U1 U1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 decreases decrease NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5255 # text = We conclude that soluble TNF receptors can inhibit stimuli-induced HIV-1 expression and NK- kappa B DNA-binding activity in chronically infected U1 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 5 TNF Tnf NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 stimuli-induced stimuli-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NK Nk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 chronically chronically ADV RB _ _ _ _ _ 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U1 U1 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5256 # text = Document 003001396 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001396 003001396 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5257 # text = Transcriptional basis for hyporesponsiveness of the human inducible nitric oxide synthase gene to lipopolysaccharide/interferon-gamma. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 basis basis NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 10 oxide oxide NOUN NN Number=Sing _ _ _ _ 11 synthase synthase NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 lipopolysaccharide/interferon-gamma lipopolysaccharide/interferon-gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5258 # text = The work reported here resolves, at the level of gene regulation, the controversy as to whether or not human monocytes/macrophages can produce nitric oxide (NO) when stimulated with lipopolysaccharide (LPS), with or without co-stimulation by interferon-gamma (IFN-gamma). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 resolves resolf NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 controversy controversy NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 to to SCONJ IN _ _ _ _ _ 18 whether whether SCONJ IN _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 produce produce VERB VB VerbForm=Inf _ _ _ _ 27 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 28 oxide oxide NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 NO no INTJ UH _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 when when ADV WRB PronType=Int _ _ _ _ 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 without without ADP IN _ _ _ _ _ 43 co-stimulation co-stimulation NOUN NN Number=Sing _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 gamma gamma NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5259 # text = Studies included structural comparison of the promoters for human and mouse inducible NO synthase (iNOS) genes, transfection and assay of human and mouse iNOS promoter regions in response to LPS +/- IFN-gamma, and electrophoretic mobility shift assays of kappa B response elements. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 structural structural ADJ JJ Degree=Pos _ _ _ _ 4 comparison comparison NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 promoters promoter NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 human human NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 NO no DET DT _ _ _ _ _ 14 synthase synthase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 iNOS inos NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 human human NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 mouse mouse NOUN NN Number=Sing _ _ _ _ 27 iNOS inos NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 regions region NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 LPS LPS NOUN NNS Number=Plur _ _ _ _ 34 +/- +/- PUNCT : _ _ _ _ _ 35 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 41 mobility mobility NOUN NN Number=Sing _ _ _ _ 42 shift shift NOUN NN Number=Sing _ _ _ _ 43 assays assay NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ _ 47 response response NOUN NN Number=Sing _ _ _ _ 48 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5260 # text = Two explanations for hyporesponsiveness of the human iNOS promoter to LPS +/- IFN-gamma were found: (1) multiple inactivating nucleotide substitutions in the human counterpart of the enhancer element that has been shown to regulate LPS/IFN-gamma induced expression of the mouse iNOS gene; and (2) and absence of one or more nuclear factors in human macrophages (e.g., an LPS-inducible nuclear factor-kappa 1 Two two NUM CD NumType=Card _ _ _ _ 2 explanations explanation NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 iNOS inos NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 LPS LPS NOUN NNS Number=Plur _ _ _ _ 12 +/- +/- PUNCT : _ _ _ _ _ 13 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 1 1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 23 inactivating inactivat VERB VBG VerbForm=Ger _ _ _ _ 24 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 25 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 40 LPS/IFN Lps/ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 gamma gamma NOUN NN Number=Sing _ _ _ _ 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 mouse mouse NOUN NN Number=Sing _ _ _ _ 48 iNOS inos NOUN NN Number=Sing _ _ _ _ 49 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ; ; PUNCT , _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 2 2 X LS _ _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 absence absence NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 one one NUM CD NumType=Card _ _ _ _ 59 or or CCONJ CC _ _ _ _ _ 60 more more ADJ JJR Degree=Cmp _ _ _ _ 61 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 62 factors factor NOUN NNS Number=Plur _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 human human ADJ JJ Degree=Pos _ _ _ _ 65 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 70 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 71 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 72 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 73 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 74 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 5261 # text = B/Rel complex), that is (are) required for maximal expression of the gene. 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5262 # text = The importance of resolution of this controversy is that future research in this area should be directed toward the understanding of alternative mechanisms that can result in the successful production of NO. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 resolution resolution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 controversy controversy NOUN NN Number=Sing _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 future future ADJ JJ Degree=Pos _ _ _ _ 11 research research NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 area area NOUN NN Number=Sing _ _ _ _ 15 should should AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 toward toward ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 understanding understanding NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 result result VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 successful successful ADJ JJ Degree=Pos _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NO no DET DT _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5263 # text = Document 003001397 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001397 003001397 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5264 # text = Transcriptional regulation during T-cell development: the alpha TCR gene as a molecular model. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 during during ADP IN _ _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 TCR Tcr NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 15 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5265 # text = The regulation of gene expression during lymphocyte differentiation is a complex process involving interactions between multiple positive and negative transcriptional regulatory elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 process process NOUN NN Number=Sing _ _ _ _ 13 involving involve VERB VBG VerbForm=Ger _ _ _ _ 14 interactions interaction NOUN NNS Number=Plur _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 positive positive ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5266 # text = In this article, transcriptional regulation of the archetypal T-cell-specific gene, alpha TCR, is discussed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 article article NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 archetypal archetypal ADJ JJ Degree=Pos _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 alpha alpha ADP IN _ _ _ _ _ 17 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5267 # text = Major recent developments, including the identification of novel families of transcription factors that regulate multiple T-cell genes during thymocyte ontogeny and T-cell activation, are described. 1 Major major ADJ JJ Degree=Pos _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 developments development NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 including include VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 identification identification NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 families family NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 22 ontogeny ontogeny NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5268 # text = Document 003001398 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001398 003001398 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5269 # text = Isolation of cDNA clones for 42 different Kruppel-related zinc finger proteins expressed in the human monoblast cell line U-937. 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 42 42 NUM CD NumType=Card _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 related related ADJ JJ Degree=Pos _ _ _ _ 11 zinc zinc NOUN NN Number=Sing _ _ _ _ 12 finger finger NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monoblast monoblast NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 U- u- SYM SYM _ _ _ _ SpaceAfter=No 22 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5270 # text = To study the complexity and structural characteristics of zinc finger proteins expressed during human hematopoiesis and to isolate novel regulators of blood cell development, a degenerate oligonucleotide probe specific for a consensus zinc finger peptide domain was used to isolate 63 cDNA clones for Kruppel-related zinc finger genes from the human monoblast cell line U-937. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complexity complexity NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 zinc zinc NOUN NN Number=Sing _ _ _ _ 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 19 novel novel NOUN NN Number=Sing _ _ _ _ 20 regulators regulator NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 degenerate degenerate NOUN NN Number=Sing _ _ _ _ 28 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 29 probe probe ADV RB _ _ _ _ _ 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 consensus consensus NOUN NN Number=Sing _ _ _ _ 34 zinc zinc NOUN NN Number=Sing _ _ _ _ 35 finger finger NOUN NN Number=Sing _ _ _ _ 36 peptide peptide NOUN NN Number=Sing _ _ _ _ 37 domain domain NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 42 63 63 NUM CD NumType=Card _ _ _ _ 43 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 44 clones clone NOUN NNS Number=Plur _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 related related ADJ JJ Degree=Pos _ _ _ _ 49 zinc zinc NOUN NN Number=Sing _ _ _ _ 50 finger finger NOUN NN Number=Sing _ _ _ _ 51 genes gene NOUN NNS Number=Plur _ _ _ _ 52 from from ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 human human ADJ JJ Degree=Pos _ _ _ _ 55 monoblast monoblast NOUN NN Number=Sing _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 line line NOUN NN Number=Sing _ _ _ _ 58 U- u- SYM SYM _ _ _ _ SpaceAfter=No 59 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 5271 # text = By extensive nucleotide sequence and Northern blot analysis, these cDNA clones were found to originate from approximately 42 different genes (HZF 1-42) of which only 8 have previously been described. 1 By by ADP IN _ _ _ _ _ 2 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 3 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cDNA cDNa ADJ JJ Degree=Pos _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 originate originate VERB VB VerbForm=Inf _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 approximately approximately ADV RB _ _ _ _ _ 19 42 42 NUM CD NumType=Card _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HZF Hzf PROPN NNP Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 8 8 NUM CD NumType=Card _ _ _ _ 32 have have AUX VB VerbForm=Inf _ _ _ _ 33 previously previously ADV RB _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5272 # text = Northern blot analysis showed that a majority of these genes were expressed at comparable levels in U-937 and HeLa cells. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 majority majority NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 937 937 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5273 # text = The large number of individual genes represented among the 63 clones and their apparent non-cell-type-specific expression suggest that the majority of the Kruppel-related zinc finger genes are likely to be expressed in most human tissues. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 large large ADJ JJ Degree=Pos _ _ _ _ 3 number number NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 individual individual ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 represented represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 63 63 NUM CD NumType=Card _ _ _ _ 11 clones clone NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 15 non-cell non-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 majority majority NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 related related ADJ JJ Degree=Pos _ _ _ _ 28 zinc zinc NOUN NN Number=Sing _ _ _ _ 29 finger finger NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 likely likely ADJ JJ Degree=Pos _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 most most ADJ JJS Degree=Sup _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5274 # text = In contrast, some of the genes displayed a restricted expression pattern, indicating that they represent potential regulators of monocyte differentiation or proliferation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 potential potential ADJ JJ Degree=Pos _ _ _ _ 19 regulators regulator NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5275 # text = Detailed structural analysis of the first 12 cDNAs (HZF 1-10) and a partial characterization of HZF 11-42 revealed that a common feature of human Kruppel-related zinc finger proteins is the presence of tandem arrays of zinc fingers ranging in number from 3 to over 20 that are preferentially located in the carboxy-terminal regions of the proteins. 1 Detailed detailed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 12 12 NUM CD NumType=Card _ _ _ _ 8 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HZF HZF PROPN NNP Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 partial partial ADJ JJ Degree=Pos _ _ _ _ 18 characterization characterization NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HZF HZF PROPN NNP Number=Sing _ _ _ _ 21 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 42 42 NUM CD NumType=Card _ _ _ _ 24 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 common common ADJ JJ Degree=Pos _ _ _ _ 28 feature feature NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 related related ADJ JJ Degree=Pos _ _ _ _ 34 zinc zinc NOUN NN Number=Sing _ _ _ _ 35 finger finger NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 tandem tandem NOUN NN Number=Sing _ _ _ _ 42 arrays array NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 zinc zinc NOUN NN Number=Sing _ _ _ _ 45 fingers finger NOUN NNS Number=Plur _ _ _ _ 46 ranging rang VERB VBG VerbForm=Ger _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 number number NOUN NN Number=Sing _ _ _ _ 49 from from ADP IN _ _ _ _ _ 50 3 3 NUM CD NumType=Card _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 over over ADP IN _ _ _ _ _ 53 20 20 NUM CD NumType=Card _ _ _ _ 54 that that PRON WDT PronType=Rel _ _ _ _ 55 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 preferentially preferentially ADV RB _ _ _ _ _ 57 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 terminal terminal NOUN NN Number=Sing _ _ _ _ 63 regions region NOUN NNS Number=Plur _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 5276 # text = In addition, several novel KRAB-containing zinc finger genes and a novel conserved sequence element were identified. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 KRAB krab NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 zinc zinc NOUN NN Number=Sing _ _ _ _ 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 novel novel NOUN NN Number=Sing _ _ _ _ 15 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5277 # text = Document 003001399 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001399 003001399 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5278 # text = Contribution of NF-kappa B and Sp1 binding motifs to the replicative capacity of human immunodeficiency virus type 1: distinct patterns of viral growth are determined by T-cell types. 1 Contribution contribution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 motifs motif NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 14 capacity capacity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 patterns pattern NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 viral viral ADJ JJ Degree=Pos _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5279 # text = Starting with a replication-incompetent molecular clone of human immunodeficiency virus type 1, lacking all the NF-kappa B and Sp1 binding sites present in the native long terminal repeat (LTR), proviruses containing reconstructed LTRs with individual or combinations of NF-kappa B and Sp1 elements were generated and evaluated for their capacity to produce virus progeny following transfection-cocultivation. 1 Starting start VERB VBG VerbForm=Ger _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 incompetent incompetent NOUN NN Number=Sing _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 17 all all DET PDT _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 native native ADJ JJ Degree=Pos _ _ _ _ 31 long long ADJ JJ Degree=Pos _ _ _ _ 32 terminal terminal NOUN NN Number=Sing _ _ _ _ 33 repeat repeat NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 proviruses proviruse NOUN NNS Number=Plur _ _ _ _ 39 containing contain VERB VBG VerbForm=Ger _ _ _ _ 40 reconstructed reconstruct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 individual individual NOUN NN Number=Sing _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 combinations combination NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa PROPN NNP Number=Sing _ _ _ _ 50 B b PROPN NNP Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 53 elements element NOUN NNS Number=Plur _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 for for ADP IN _ _ _ _ _ 59 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 60 capacity capacity NOUN NN Number=Sing _ _ _ _ 61 to to PART TO _ _ _ _ _ 62 produce produce VERB VB VerbForm=Inf _ _ _ _ 63 virus virus NOUN NN Number=Sing _ _ _ _ 64 progeny progeny NOUN NN Number=Sing _ _ _ _ 65 following follow VERB VBG VerbForm=Ger _ _ _ _ 66 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 cocultivation cocultivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 5280 # text = Virus stocks obtained from these experiments exhibited a continuum of replicative capacities in different human T-cell types depending on which element(s) was present in the LTR. 1 Virus virus ADJ JJ Degree=Pos _ _ _ _ 2 stocks stock NOUN NNS Number=Plur _ _ _ _ 3 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 experiments experiment NOUN NNS Number=Plur _ _ _ _ 7 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 continuum continuum NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 12 capacities capacitie NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 depending depend VERB VBG VerbForm=Ger _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 which which DET WDT PronType=Int _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 s s X AFX _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5281 # text = For example, in experiments involving proviral clones with LTRs containing one or two NF-kappa B elements (and no Sp1 binding sites), a hierarchy of cellular permissivity to virus replication (peripheral blood lymphocytes = MT4 greater than H9 greater than CEM greater than Jurkat) was observed. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 involving involve VERB VBG VerbForm=Ger _ _ _ _ 7 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 LTRs LTRs PROPN NNP Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 and and CCONJ CC _ _ _ _ _ 22 no no DET DT _ _ _ _ _ 23 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 32 permissivity permissivity NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 virus virus NOUN NN Number=Sing _ _ _ _ 35 replication replication NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 38 blood blood NOUN NN Number=Sing _ _ _ _ 39 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 40 = = PUNCT , _ _ _ _ _ 41 MT4 MT4 PROPN NNP Number=Sing _ _ _ _ 42 greater greater ADJ JJR Degree=Cmp _ _ _ _ 43 than than ADP IN _ _ _ _ _ 44 H9 H9 NUM CD NumType=Card _ _ _ _ 45 greater greater ADJ JJR Degree=Cmp _ _ _ _ 46 than than ADP IN _ _ _ _ _ 47 CEM CEM PROPN NNP Number=Sing _ _ _ _ 48 greater greater ADJ JJR Degree=Cmp _ _ _ _ 49 than than ADP IN _ _ _ _ _ 50 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 53 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 5282 # text = Of note was the associated emergence of second-site LTR revertants which involved an alteration of the TATA box. 1 Of of ADP IN _ _ _ _ _ 2 note note NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 associated associated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 emergence emergence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 site site NOUN NN Number=Sing _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 revertants revertant NOUN NNS Number=Plur _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 involved involve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 alteration alteration NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 TATA TATa NOUN NN Number=Sing _ _ _ _ 20 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5283 # text = These results suggest that the human immunodeficiency virus type 1 LTR possesses functional redundancy which ensures virus replication in different T-cell types and is capable of changing depending on the particular combination of transcriptional factors present. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 possesses possess NOUN NNS Number=Plur _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 redundancy redundancy NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 ensures ensure VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 types type NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 capable capable ADJ JJ Degree=Pos _ _ _ _ 27 of of SCONJ IN _ _ _ _ _ 28 changing change VERB VBG VerbForm=Ger _ _ _ _ 29 depending depend VERB VBG VerbForm=Ger _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 particular particular ADJ JJ Degree=Pos _ _ _ _ 33 combination combination NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5284 # text = Document 003001400 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001400 003001400 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5285 # text = Oxidant-regulation of gene expression in the chronically inflamed intestine. 1 Oxidant Oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gene gene ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 chronically chronically ADV RB _ _ _ _ _ 10 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 intestine intestine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5286 # text = It is becoming increasingly apparent that the chronic gut inflammation observed in the idiopathic inflammatory bowel diseases (e.g. ulcerative colitis, Crohn's disease) is associated with enhanced production of leukocyte-derived oxidants. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 becoming become VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 increasingly increasingly ADV RB _ _ _ _ _ 5 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 9 gut gut NOUN NN Number=Sing _ _ _ _ 10 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 11 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 idiopathic idiopathic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 bowel bowel NOUN NN Number=Sing _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 e.g. e.g. X FW _ _ _ _ _ 20 ulcerative ulcerative ADJ JJ Degree=Pos _ _ _ _ 21 colitis colitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Crohn Crohn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 oxidants oxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5287 # text = Oxidants such as hydrogen peroxide are known to activate certain transcription factors such as nuclear transcription factor kappa beta. 1 Oxidants Oxidant NOUN NNS Number=Plur _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 5 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 certain certain ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5288 # text = Nuclear transcription factor kB (NF-kappa B) is a ubiquitous transcription factor and pleiotropic regulator of numerous genes involved in the immune and inflammatory responses. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kB kb PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 18 regulator regulator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 immune immune ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5289 # text = This transcription factor is activated via the selective phosphorylation, ubiquination and degradation of its inhibitor protein I-kB thereby allowing translocation of NF-kappa B into the nucleus where it upregulates the transcription of a variety of adhesion molecules (e.g. ICAM-1, VCAM-1), cytokines (TNF, IL-1, IL-6) and enzymes (iNOS). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 via via ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ubiquination ubiquination NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 kB kb PROPN NNP Number=Sing _ _ _ _ 21 thereby thereby ADV RB _ _ _ _ _ 22 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 32 where where ADV WRB PronType=Rel _ _ _ _ 33 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 upregulates upregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 variety variety NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 42 molecules molecule NOUN NNS Number=Plur _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 e.g. e.g. X FW _ _ _ _ _ 45 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 VCAM VCAm NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - SYM SYM _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 IL IL ADV RB _ _ _ _ SpaceAfter=No 63 - - SYM SYM _ _ _ _ SpaceAfter=No 64 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 68 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 69 iNOS ino NOUN NNS Number=Plur _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 5290 # text = The proteolytic degradation of the post-translationally modified I-kappa B is known to be mediated by the 26S proteasome complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 3 degradation degradation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 post post X AFX _ _ _ _ SpaceAfter=No 7 -translationally -translationally ADV RB _ _ _ _ _ 8 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 S s NOUN NN Number=Sing _ _ _ _ 22 proteasome proteasome DET DT _ _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5291 # text = Based upon work from our laboratory, we propose that inhibition of NF-kappa B activation produces significant anti inflammatory activity which may be mediated by the inhibition of transcription of certain pro-inflammatory mediators and adhesion molecules. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upon upon ADP IN _ _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 laboratory laboratory NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 produces produce NOUN NNS Number=Plur _ _ _ _ 19 significant significant ADJ JJ Degree=Pos _ _ _ _ 20 anti anti X AFX _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 certain certain ADJ JJ Degree=Pos _ _ _ _ 34 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 35 mediators mediator NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 38 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5292 # text = Document 003001401 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001401 003001401 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5293 # text = Coexpression of the interleukin-13 and interleukin-4 genes correlates with their physical linkage in the cytokine gene cluster on human chromosome 5q23-31. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 physical physical ADJ JJ Degree=Pos _ _ _ _ 16 linkage linkage NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 cluster cluster NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 25 5q23 5q23 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 31 31 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5294 # text = Interleukin-13 (IL-13) and IL-4 are cytokines produced by T cells that are encoded by the q23-31 region of human chromosome 5. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -13 -13 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 14 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 q23 q23 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 -31 -31 NUM CD NumType=Card _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5295 # text = To investigate the regulation of IL-13 gene expression by T cells, we isolated and sequenced the human IL-13 gene, analyzed its 5'-flanking region for potential transcriptional activation elements, and examined its expression in nontransformed T-lineage cell populations. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 13 13 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 sequenced sequence VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 13 13 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 28 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 potential potential ADJ JJ Degree=Pos _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 nontransformed nontransform ADJ JJ Degree=Pos _ _ _ _ 46 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 lineage lineage NOUN NN Number=Sing _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 5296 # text = The human IL-13 gene was located 12.5-kb upstream of the IL-4 gene and 2-kb downstream of a CpG island. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 13 13 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 12.5 12.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kb kb NOUN NN Number=Sing _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kb kb NOUN NN Number=Sing _ _ _ _ 23 downstream downstream NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 CpG CpG PROPN NNP Number=Sing _ _ _ _ 27 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5297 # text = The IL-13 gene 5' flank region included a segment with sequence homology to P elements of the IL-4 promoter involved in transcriptional activation in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 13 13 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ _ 8 flank flank NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 segment segment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 homology homology NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5298 # text = Mutation of the IL-13 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -13 -13 NUM CD NumType=Card _ _ _ _ # sent_id = 5299 # text = P element site significantly reduced IL-13 promoter activity in response to T-cell activation. 1 P p SYM NFP _ _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 13 13 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5300 # text = Oligonucleotides containing the IL-13 or IL-4 P element sites specifically bound the transcriptional activator protein, nuclear factor-activated T cells, preformed (NF-ATp), when incubated with nuclear protein extracts from activated T cells. 1 Oligonucleotides Oligonucleotides SCONJ IN _ _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 P p NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 bound bound ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -activated -activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 when when ADV WRB PronType=Int _ _ _ _ 35 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5301 # text = Similar to IL-4, IL-13 mRNA expression was highest in T-cell populations enriched for cells that had previously been primed in vivo or in vitro, indicating that priming increases the expression of the IL-13 and IL-4 genes in a coordinate manner. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 13 13 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 highest highest ADJ JJS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 populations population NOUN NNS Number=Plur _ _ _ _ 18 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 previously previously ADV RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 primed prim VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 priming prim VERB VBG VerbForm=Ger _ _ _ _ 35 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 13 13 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 4 4 NUM CD NumType=Card _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 51 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 5302 # text = Because the primed T cells contain higher levels of nuclear NF-ATp, capable of binding to P elements of the IL-4 and IL-13 promoters, than do freshly-isolated T cells, the NF-AT-binding P elements are attractive candidates to mediate the coordinate expression of these two cytokine genes. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 primed prim ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 higher higher ADJ JJR Degree=Cmp _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 capable capable ADJ JJ Degree=Pos _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 P p PROPN NNP Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 13 13 NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 than than SCONJ IN _ _ _ _ _ 33 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 freshly freshly ADV RB _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 binding binding VERB VBG VerbForm=Ger _ _ _ _ 46 P p NOUN NN Number=Sing _ _ _ _ 47 elements element NOUN NNS Number=Plur _ _ _ _ 48 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 49 attractive attractive ADJ JJ Degree=Pos _ _ _ _ 50 candidates candidate NOUN NNS Number=Plur _ _ _ _ 51 to to PART TO _ _ _ _ _ 52 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 55 expression expression NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 58 two two NUM CD NumType=Card _ _ _ _ 59 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 60 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5303 # text = Document 003001402 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001402 003001402 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5304 # text = Isolation of a rel-related human cDNA that potentially encodes the 65-kD subunit of NF-kappa B [published erratum appears in Science 1991 Oct 4;254(5028):11] 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rel- rel- SYM SYM _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 potentially potentially ADV RB _ _ _ _ _ 10 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kD k NOUN NN Number=Sing _ _ _ _ 15 subunit subunit NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 erratum erratum NOUN NN Number=Sing _ _ _ _ 24 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Science Science PROPN NNP Number=Sing _ _ _ _ 27 1991 1991 NUM CD NumType=Card _ _ _ _ 28 Oct Oct PROPN NNP Number=Sing _ _ _ _ 29 4;254 4;254 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 5028 5028 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 :11 :11 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 5305 # text = A DNA probe that spanned a domain conserved among the proto-oncogene c-rel, the Drosophila morphogen dorsal, and the p50 DNA binding subunit of NF-kappa B was generated from Jurkat T cell complementary DNA with the polymerase chain reaction (PCR) and degenerate oligonucleotides. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 probe probe NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 spanned span VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 among among ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 13 c- c- PUNCT , _ _ _ _ SpaceAfter=No 14 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 18 morphogen morphogen NOUN NN Number=Sing _ _ _ _ 19 dorsal dorsal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 subunit subunit NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 36 T T PROPN NNP Number=Sing _ _ _ _ 37 cell cell PROPN NNP Number=Sing _ _ _ _ 38 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 43 chain chain NOUN NN Number=Sing _ _ _ _ 44 reaction reaction NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 degenerate degenerate ADJ JJ Degree=Pos _ _ _ _ 50 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5306 # text = This probe was used to identify a rel-related complementary DNA that hybridized to a 2.6-kilobase messenger RNA present in human T and B lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 probe probe NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 identify identify VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rel-related rel-relate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 hybridized hybridize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 2.6 2.6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 18 messenger messenger NOUN NN Number=Sing _ _ _ _ 19 RNA RNA PROPN NNP Number=Sing _ _ _ _ 20 present present VERB VB VerbForm=Inf _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5307 # text = In vitro transcription and translation of the complementary DNA resulted in the synthesis of a protein with an apparent molecular size of 65 kilodaltons (kD). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 translation translation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 20 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 21 size size NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 65 65 NUM CD NumType=Card _ _ _ _ 24 kilodaltons kilodalton NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5308 # text = The translated protein showed weak DNA binding with a specificity for the kappa B binding motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 weak weak ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 specificity specificity NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 binding binde VERB VBG VerbForm=Ger _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5309 # text = This protein-DNA complex comigrated with the complex obtained with the purified human p65 NF-kappa 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 comigrated comigrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 5310 # text = B subunit and binding was inhibited by I kappa B-alpha and -beta proteins. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B- B- PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5311 # text = In addition, the 65-kD protein associated with the p50 subunit of NF-kappa B and the kappa B probe to form a complex with the same electrophoretic mobility as the NF-kappa B-DNA complex. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kD k NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 probe probe NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 form form VERB VB VerbForm=Inf _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 same same ADJ JJ Degree=Pos _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 DNA dna NOUN NN Number=Sing _ _ _ _ 41 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5312 # text = Therefore the rel-related 65-kD protein may represent the p65 subunit of the active NF-kappa B transcription factor complex. 1 Therefore therefore ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 rel-related rel-related ADJ JJ Degree=Pos _ _ _ _ 4 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kD kd NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 represent represent VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5313 # text = Document 003001403 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001403 003001403 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5314 # text = Induction of interleukin-12 p40 transcript by CD40 ligation via activation of nuclear factor-kappaB. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 12 12 NUM CD NumType=Card _ _ _ _ 6 p40 p40 NUM CD NumType=Card _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 CD40 CD40 NUM CD NumType=Card _ _ _ _ 10 ligation ligation NOUN NN Number=Sing _ _ _ _ 11 via via ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 5315 # text = Interleukin-12 is produced in response to infection with bacteria or parasites or to bacterial constituents such as LPS in monocytes/macrophages and dendritic cells, and also generated by the interaction between activated T cells and antigen-presenting cells via CD40-CD40 ligand (CD40L). 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 parasites parasite NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 17 constituents constituent NOUN NNS Number=Plur _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 LPS Lp NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 between between ADP IN _ _ _ _ _ 36 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 presenting present VERB VBG VerbForm=Ger _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 via via ADP IN _ _ _ _ _ 45 CD40- Cd40- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 CD40 CD40 NUM CD NumType=Card _ _ _ _ 47 ligand ligand NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 CD40L CD40L NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5316 # text = So far, transcriptional analyses of p40 have been carried out only using bacterial constituents such as LPS as stimuli. 1 So so ADV RB _ _ _ _ _ 2 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p40 p40 NOUN NN Number=Sing _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 out out ADP RP _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 constituents constituent NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 LPS LPS NOUN NNS Number=Plur _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5317 # text = In the present study, we have characterized the transcriptional induction of p40 by CD40 ligation in a human B lymphoblastoid cell line, Daudi, and a human acute monocytic leukemia cell line, THP-1. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p40 p40 NUM CD NumType=Card _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CD40 CD40 NUM CD NumType=Card _ _ _ _ 16 ligation ligation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Daudi Daudi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 acute acute NOUN NN Number=Sing _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5318 # text = These cells, stimulated by an agonistic monoclonal antibody against CD40 or by transfection with a CD40L expression vector, secreted p40 and showed enhanced p40 mRNA expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibody antibody NOUN NN Number=Sing _ _ _ _ 10 against against ADP IN _ _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 transfection transfection NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 p40 p40 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 p40 p40 NUM CD NumType=Card _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5319 # text = Sequence analysis of the p40 promoter region identified two potential nuclear factor (NF)-kappaB binding sites conserved between mouse and human. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p40 p40 NUM CD NumType=Card _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 potential potential ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5320 # text = Electrophoretic mobility shift assay revealed that the potential NF-kappaB binding sequence which is located around 120 bp upstream of the transcription initiation site in murine and human p40 genes formed an NF-kappaB complex with nuclear extract from Daudi cells stimulated by CD40 ligation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 around around ADP IN _ _ _ _ _ 18 120 120 NUM CD NumType=Card _ _ _ _ 19 bp bp NOUN NN Number=Sing _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 initiation initiation NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 murine murine NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 p40 p40 NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 complex complex NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 extract extract NOUN NN Number=Sing _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 CD40 CD40 NUM CD NumType=Card _ _ _ _ 47 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5321 # text = Moreover, transfection of Daudi cells with the polymerized NF-kappaB binding sequence ligated to a thymidine kinase/chloramphenicol acetyltransferase (CAT) reporter plasmid greatly induced CAT activity, but transfection with the polymerized mutated NF-kappaB binding sequence did not. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Daudi Daudi ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 polymerized polymerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 22 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 28 greatly greatly ADV RB _ _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 CAT cat NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 transfection transfection NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 polymerized polymerize NOUN NN Number=Sing _ _ _ _ 38 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 sequence sequence NOUN NN Number=Sing _ _ _ _ 44 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5322 # text = These results suggest that the NF-kappaB binding site located around 120 bp upstream of the transcription initiation site in murine and human p40 promoter regions could be important for the p40 induction by CD40 ligation via activation of NF-kappaB. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 around around ADV RB _ _ _ _ _ 13 120 120 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 p40 p40 NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 regions region NOUN NNS Number=Plur _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 p40 p40 NOUN NN Number=Sing _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 CD40 CD40 NUM CD NumType=Card _ _ _ _ 37 ligation ligation NOUN NN Number=Sing _ _ _ _ 38 via via ADP IN _ _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5323 # text = Document 003001404 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001404 003001404 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5324 # text = Inactivation of IkappaBbeta by the tax protein of human T-cell leukemia virus type 1: a potential mechanism for constitutive induction of NF-kappaB. 1 Inactivation Inactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tax tax NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 potential potential ADJ JJ Degree=Pos _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5325 # text = In resting T lymphocytes, the transcription factor NF-kappaB is sequestered in the cytoplasm via interactions with members of the I kappa B family of inhibitors, including IkappaBalpha and IkappaBbeta. 1 In in SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 interactions interaction NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 I I PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5326 # text = During normal T-cell activation, IkappaBalpha is rapidly phosphorylated, ubiquitinated, and degraded by the 26S proteasome, thus permitting the release of functional NF-kappaB. 1 During during ADP IN _ _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 rapidly rapidly ADV RB _ _ _ _ _ 10 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ubiquitinated ubiquitinate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 S be NOUN NN Number=Sing _ _ _ _ 20 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 thus thus ADV RB _ _ _ _ _ 23 permitting permitt VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 release release NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 functional functional ADJ JJ Degree=Pos _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5327 # text = In contrast to its transient pattern of nuclear induction during an immune response, NF-kappaB is constitutively activated in cells expressing the Tax transforming protein of human T-cell leukemia virus type I (HTLV-1). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 transient transient ADJ JJ Degree=Pos _ _ _ _ 6 pattern pattern NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 virus virus NOUN NN Number=Sing _ _ _ _ 34 type type NOUN NN Number=Sing _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5328 # text = Recent studies indicate that HTLV-1 Tax targets IkappaBalpha to the ubiquitin-proteasome pathway. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 targets target NOUN NNS Number=Plur _ _ _ _ 10 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 14 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5329 # text = However, it remains unclear how this viral protein induces a persistent rather than transient NF-kappaB response. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 6 how how ADV WRB PronType=Int _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 viral viral ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 persistent persistent NOUN NN Number=Sing _ _ _ _ 13 rather rather ADV RB _ _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5330 # text = In this report, we provide evidence that in addition to acting on IkappaBalpha, Tax stimulates the turnover Of IkappaBbeta via a related targeting mechanism. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 addition addition NOUN NN Number=Sing _ _ _ _ 11 to to SCONJ IN _ _ _ _ _ 12 acting act VERB VBG VerbForm=Ger _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Tax Tax PROPN NNP Number=Sing _ _ _ _ 17 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 turnover turnover NOUN NN Number=Sing _ _ _ _ 20 Of of ADP IN _ _ _ _ _ 21 IkappaBbet IkappaBbet PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 via via ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 targeting targeting NOUN NN Number=Sing _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5331 # text = Like IkappaBalpha, Tax-mediated breakdown of IkappaBbeta in transfected T lymphocytes is blocked either by cell-permeable proteasome inhibitors or by mutation Of IkappaBbeta at two serine residues present within its N-terminal region. 1 Like like ADP IN _ _ _ _ _ 2 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 breakdown breakdown ADP IN _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 21 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 22 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 mutation mutation NOUN NN Number=Sing _ _ _ _ 26 Of of ADP IN _ _ _ _ _ 27 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 serine serine NOUN NN Number=Sing _ _ _ _ 31 residues residue NOUN NNS Number=Plur _ _ _ _ 32 present present ADJ JJ Degree=Pos _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 35 N- n- PUNCT : _ _ _ _ SpaceAfter=No 36 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5332 # text = Despite the dual specificity of HTLV-1 Tax for IkappaBalpha and IkappaBbeta at the protein level, Tax selectively stimulates NF-kappaB-directed transcription of the IkappaBalpha gene. 1 Despite despite ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 dual dual ADJ JJ Degree=Pos _ _ _ _ 4 specificity specificity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Tax tax PROPN NNP Number=Sing _ _ _ _ 20 selectively selectively ADV RB _ _ _ _ _ 21 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5333 # text = Consequently, IkappaBbeta protein expression is chronically downregulated in HTLV-1-infected T lymphocytes. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 chronically chronically ADV RB _ _ _ _ _ 8 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5334 # text = These findings with IkappaBbeta provide a potential mechanism for the constitutive activation of NF-kappaB in Tax-expressing cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 5 provide provide VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potential potential ADJ JJ Degree=Pos _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5335 # text = Document 003001405 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001405 003001405 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5336 # text = The role of nuclear factor-kappa B in cytokine gene regulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5337 # text = Transcription factors are DNA-binding proteins that regulate gene expression. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 gene gene ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5338 # text = Nuclear factor-kappa B (NF-kappa B) is a critical transcription factor for maximal expression of many cytokines that are involved in the pathogenesis of inflammatory diseases, such as adult respiratory distress syndrome (ARDS) and sepsis syndrome. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 many many ADJ JJ Degree=Pos _ _ _ _ 22 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 such such ADJ JJ Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 adult adult ADJ JJ Degree=Pos _ _ _ _ 36 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 37 distress distress NOUN NN Number=Sing _ _ _ _ 38 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 ARDS ARDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 sepsis sepsis DET DT Number=Sing|PronType=Dem _ _ _ _ 44 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5339 # text = Activation and regulation of NF-kappa B are tightly controlled by a group of inhibitory proteins (I kappa B) that sequester NF-kappa B in the cytoplasm of immune/inflammatory effector cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tightly tightly ADV RB _ _ _ _ _ 11 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 group group NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 sequester sequester NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 immune immune ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 36 effector effector NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5340 # text = NF-kappa B activation involves signaled phosphorylation, ubiquitination, and proteolysis of I kappa B. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 signaled signale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 ubiquitination ubiquitination NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B. B. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5341 # text = Liberated NF-kappa B migrates to the nucleus, where it binds to specific promoter sites and activates gene transcription. 1 Liberated Liberate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 migrates migrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 where where ADV WRB PronType=Rel _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5342 # text = The activation of NF-kappa B initiates both extracellular and intracellular regulatory events that result in autoregulation of the inflammatory cascade through modulation of NF-kappa B activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 cascade cascade NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 modulation modulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5343 # text = Recently, activation of NF-kappa B has been linked to ARDS and has been shown to be a critical proximal step in the initiation of neutrophilic inflammation in animal models. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 ARDS ARDS PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 23 step step NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 initiation initiation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 neutrophilic neutrophilic ADJ JJ Degree=Pos _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 animal animal NOUN NN Number=Sing _ _ _ _ 32 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5344 # text = Activation of NF-kappa B can be inhibited in vivo by treatment with antioxidants, corticosteroids, and the induction of endotoxin tolerance. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 treatment treatment NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 corticosteroids corticosteroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 24 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5345 # text = Identification of more specific and efficacious inhibitors of NF-kappa B activation might prove beneficial for the treatment of cytokine-mediated inflammatory diseases. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 more more ADJ JJR Degree=Cmp _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 efficacious efficacious ADJ JJ Degree=Pos _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 might might AUX MD VerbForm=Fin _ _ _ _ 15 prove prove VERB VB VerbForm=Inf _ _ _ _ 16 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5346 # text = Document 003001406 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001406 003001406 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5347 # text = OBF-1, a novel B cell-specific coactivator that stimulates immunoglobulin promoter activity through association with octamer-binding proteins. 1 OBF Obf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 association association NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5348 # text = Recent biochemical and genetic studies indicate that in addition to the octamer-binding proteins Oct-1 and Oct-2, other B cell components are required for lymphoid-restricted, octamer site-mediated immunoglobulin gene promoter activity. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 addition addition NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 components component NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 octamer octamer NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5349 # text = Using a genetic screen in yeast, we have isolated B cell-derived cDNAs encoding Oct-binding factor 1 (OBF-1), a novel protein that specifically associates with Oct-1 and Oct-2. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 4 screen screen NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 yeast yeast PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 16 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 17 Oct- Oct- PUNCT , _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 OBF Obf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 novel novel NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 specifically specifically ADV RB _ _ _ _ _ 32 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -1 -1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5350 # text = Biochemical studies demonstrate that OBF-1 has no intrinsic DNA-binding activity and recognizes the POU domains of Oct-1 and Oct-2, but not those of Oct-4 and Oct-6. 1 Biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 POU pou NOUN NN Number=Sing _ _ _ _ 19 domains domain NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5351 # text = The OBF-1 mRNA is expressed in a highly cell-specific manner, being most abundant in B cells and essentially absent in most of the other cells or tissues tested. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 OBF Obf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 highly highly ADV RB _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 being be AUX VBG VerbForm=Ger _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 essentially essentially ADV RB _ _ _ _ _ 24 absent absend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 most most ADJ JJS Degree=Sup _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 tissues tissue NOUN NNS Number=Plur _ _ _ _ 33 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5352 # text = Furthermore, expression of OBF-1 in HeLa cells selectively stimulates the activity of a natural immunoglobulin promoter in an octamer site-dependent manner. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 selectively selectively ADV RB _ _ _ _ _ 12 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 natural natural ADJ JJ Degree=Pos _ _ _ _ 18 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5353 # text = Thus, OBF-1 has all the properties expected for a B cell-specific transcriptional coactivator protein. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 all all DET PDT _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 properties property NOUN NNS Number=Plur _ _ _ _ 10 expected expect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5354 # text = Document 003001407 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001407 003001407 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5355 # text = T cells from renal cell carcinoma patients exhibit an abnormal pattern of kappa B-specific DNA-binding activity: a preliminary report. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 renal renal ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 11 pattern pattern NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 24 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5356 # text = Recent data suggest that the poor induction of a T-cell response to human renal cell carcinoma (RCC) may be related to alterations in signal transduction pathways. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 poor poor ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 renal renal ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 related related ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 alterations alteration NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 signal signal ADJ JJ Degree=Pos _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5357 # text = We report that T cells from RCC patients have two alterations in kappa B motif-specific DNA-binding activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 RCC RCC PROPN NNP Number=Sing _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 alterations alteration NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5358 # text = The first alteration involves the constitutive expression of substantial kappa B-binding activity in nuclear extracts, which was observed in the electrophoretic mobility shift assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 alteration alteration NOUN NN Number=Sing _ _ _ _ 4 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- SYM SYM _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5359 # text = The magnitude of kappa B activity in unstimulated patient T cells was similar to that observed in T cells from normal individuals that had been activated in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 9 patient patient ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 similar similar ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 individuals individual NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5360 # text = On the basis of Western blotting experiments using antibodies to kappa 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Western western ADJ JJ Degree=Pos _ _ _ _ 6 blotting blotting NOUN NN Number=Sing _ _ _ _ 7 experiments experiment NOUN NNS Number=Plur _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 5361 # text = B/Rel family proteins, the kappa B-binding activity constitutively expressed in T cells from RCC patients is composed mostly of the NF-kappa B1 (p50) subunit. 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 constitutively constitutively ADV RB _ _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 RCC RCC PROPN NNP Number=Sing _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 mostly mostly ADV RB _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B1 B1 PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5362 # text = The second abnormality in kappa B-binding activity in T cells from these patients is that RelA, a member of the Rel homology family which is part of the normal NF-kappa B complex, was not induced in the nucleus following activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 abnormality abnormality NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B- B- PUNCT , _ _ _ _ SpaceAfter=No 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 patients patient NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that ADP IN Typo=Yes _ _ _ _ 17 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 member member NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Rel Rel PROPN NNP Number=Sing _ _ _ _ 24 homology homology NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 part part NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 normal normal ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 44 following follow VERB VBG VerbForm=Ger _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5363 # text = Western blotting analysis did not detect any RelA in nuclear extracts either before or after stimulation of T cells. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 detect detect VERB VB VerbForm=Inf _ _ _ _ 7 any any DET DT _ _ _ _ _ 8 RelA Rela NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 before before ADV RB _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5364 # text = The altered kappa B-binding activity in T cells from RCC patients may impair their capacity to respond normally to various stimuli. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B- B- PUNCT , _ _ _ _ SpaceAfter=No 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 RCC RCC PROPN NNP Number=Sing _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 impair impair VERB VB VerbForm=Inf _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 capacity capacity NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 respond respond VERB VB VerbForm=Inf _ _ _ _ 19 normally normally ADV RB _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5365 # text = Document 003001408 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001408 003001408 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5366 # text = Effects of prostaglandin E2 on Th0-type human T cell clones: modulation of functions of nuclear proteins involved in cytokine production. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 4 E2 E2 NUM CD NumType=Card _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 Th0 Th0 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 type type NOUN NN Number=Sing _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 modulation modulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 involved involve ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5367 # text = The effects of prostaglandin E2 (PGE2) on cytokine production and proliferation of the CD4+ human helper 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 5 E2 E2 NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PGE2 PGE2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 helper helper NOUN NN Number=Sing _ _ _ _ # sent_id = 5368 # text = T cell clone SP-B21 were investigated. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ _ 4 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 B21 b21 NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 5369 # text = In cells stimulated with anti-CD3 mAb, PGE2 inhibited cell proliferation and the production of all the cytokines examined. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 PGE2 PGE2 PART TO Abbr=Yes _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 all all DET PDT _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 19 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5370 # text = Addition of rIL-2 fully restored the proliferative response and partially restored the production of IL-4 and IL-5, but not that of other cytokines. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 rIL rIL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 fully fully ADV RB _ _ _ _ _ 7 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 partially partially ADV RB _ _ _ _ _ 13 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5371 # text = In contrast, in cells stimulated with phorbol myristate acetate (PMA)/A23187, PGE2 enhanced the production of IL-4 and IL-5, and only partially inhibited the production of other cytokines. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 myristate myristate NOUN NN Number=Sing _ _ _ _ 10 acetate acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 /A23187 /A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 partially partially ADV RB _ _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 production production NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 other other ADJ JJ Degree=Pos _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5372 # text = Therefore, the effects of PGE2 vary depending on the mode of T cell activation, and the IL-4 and IL-5 are regulated differently from other cytokines. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PGE2 PGE2 NOUN NN Number=Sing _ _ _ _ 7 vary vary NOUN NN Number=Sing _ _ _ _ 8 depending depend VERB VBG VerbForm=Ger _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mode mode NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 differently differently ADV RB _ _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 other other ADJ JJ Degree=Pos _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5373 # text = In a mobility shift assay, only the NF-kappa B (p50/p50) homodimer was observed in a complex formed with the kappa B sequence in unstimulated SP-B21 cells. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / SYM SYM _ _ _ _ SpaceAfter=No 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 32 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 21 21 NUM CD NumType=Card _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5374 # text = When cells were stimulated with anti-CD3 mAb or PMA/A23187, a complex formation of NF-kappa B (p50/p65) heterodimer with the kappa B sequence was induced. 1 When when ADV WRB PronType=Int _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 A23187 A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 complex complex ADJ JJ Degree=Pos _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / SYM SYM _ _ _ _ SpaceAfter=No 24 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5375 # text = Interestingly, PGE2 or di-butyryl (Bt2)cAMP abolished the binding of NF-kappa B (p50/p65) heterodimer to the kappa B sequence in cells stimulated with anti-CD3 mAb but not with PMA/A23187. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 di-butyryl di-butyryl NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 Bt2 Bt2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / SYM SYM _ _ _ _ SpaceAfter=No 21 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 34 mAb mAb NOUN NN Number=Sing _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 /A /A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 23187 23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5376 # text = Our results suggest that the target of PGE2 action is a component in the signal transduction pathway leading to the activation of protein kinase C. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 component component NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5377 # text = However, the inhibition of the T cell activation signals by PGE2 is selective. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 selective selective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5378 # text = PGE2 enhanced the complex formation with NF-AT, AP-1 and CLE0 sequences when the cells were activated by either anti-CD3 mAb or PMA/A23187 stimulation. 1 PGE2 PGE2 X LS _ _ _ _ _ 2 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complex complex ADJ JJ Degree=Pos _ _ _ _ 5 formation formation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 when when ADV WRB PronType=Int _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 either either CCONJ CC _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 mAb mAb PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 /A23187 /A23187 NUM CD NumType=Card _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5379 # text = It seems therefore that PGE2, by elevating cAMP levels, interferes with the activation pathway for NF-kappa B but not for NF-AT, AP-1 or CLE0 binding protein. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 elevating elevat VERB VBG VerbForm=Ger _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5380 # text = Document 003001409 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001409 003001409 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n